https://launchpad.net/ubuntu/+source/ball/1.5.0+git20180813.37fc53c-6build1/+build/19247879 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux riscv64-qemu-lcy01-063 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.79.0-1ubuntu1 git_1:2.25.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 python-debian_0.1.36build1. Syncing the system clock with the buildd NTP service... 2 May 06:35:32 ntpdate[360332]: adjust time server 10.211.37.1 offset 0.003104 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 --image-type chroot /home/buildd/filecache-default/f3eb94e98b295919e6c8d0c40a2cb7b393a0119c Creating target for build PACKAGEBUILD-19247879 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 Starting target for build PACKAGEBUILD-19247879 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19247879 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 Updating target for build PACKAGEBUILD-19247879 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [268 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [119 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main riscv64 Packages [880 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [506 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe riscv64 Packages [8078 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5184 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 Packages [97.3 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [58.4 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 Packages [319 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [260 kB] Fetched 15.9 MB in 30s (540 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: base-files cpp-9 dash debconf e2fsprogs g++-9 gcc-10-base gcc-9 gcc-9-base libacl1 libatomic1 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libext2fs2 libgcc-9-dev libgcc-s1 libgcc1 libgomp1 libgpm2 libidn2-0 libncursesw6 libperl5.30 libsqlite3-0 libss2 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libudev1 logsave make ncurses-base ncurses-bin openssl perl perl-base perl-modules-5.30 sysvinit-utils 41 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 36.7 MB of archives. After this operation, 27.6 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcrypt-dev riscv64 1:4.4.15-1ubuntu1 [205 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcrypt1 riscv64 1:4.4.15-1ubuntu1 [94.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main riscv64 base-files riscv64 11ubuntu6 [59.6 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libperl5.30 riscv64 5.30.0-10 [3447 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 perl riscv64 5.30.0-10 [224 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 perl-base riscv64 5.30.0-10 [1419 kB] Get:7 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 perl-modules-5.30 all 5.30.0-10 [2738 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 debconf all 1.5.74 [121 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main riscv64 dash riscv64 0.5.10.2-7 [82.0 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main riscv64 ncurses-bin riscv64 6.2-1 [166 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main riscv64 ncurses-base all 6.2-1 [18.7 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main riscv64 sysvinit-utils riscv64 2.96-3ubuntu1 [19.6 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libsystemd0 riscv64 245.5-2ubuntu1 [242 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 logsave riscv64 1.45.6-1ubuntu1 [9708 B] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libext2fs2 riscv64 1.45.6-1ubuntu1 [175 kB] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 e2fsprogs riscv64 1.45.6-1ubuntu1 [496 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main riscv64 libatomic1 riscv64 10-20200425-1ubuntu2 [7484 B] Get:18 http://ftpmaster.internal/ubuntu groovy/main riscv64 gcc-10-base riscv64 10-20200425-1ubuntu2 [19.3 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main riscv64 libstdc++6 riscv64 10-20200425-1ubuntu2 [506 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgomp1 riscv64 10-20200425-1ubuntu2 [83.4 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libgcc1 riscv64 1:10-20200425-1ubuntu2 [40.4 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main riscv64 libcc1-0 riscv64 10-20200425-1ubuntu2 [38.4 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgcc-s1 riscv64 10-20200425-1ubuntu2 [40.4 kB] Get:24 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libacl1 riscv64 2.2.53-8 [16.4 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main riscv64 libncursesw6 riscv64 6.2-1 [116 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main riscv64 libtinfo6 riscv64 6.2-1 [78.7 kB] Get:27 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libudev1 riscv64 245.5-2ubuntu1 [69.7 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main riscv64 libidn2-0 riscv64 2.3.0-1 [50.5 kB] Get:29 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcom-err2 riscv64 1.45.6-1ubuntu1 [8564 B] Get:30 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libss2 riscv64 1.45.6-1ubuntu1 [9820 B] Get:31 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libsqlite3-0 riscv64 3.31.1-5 [487 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main riscv64 libssl1.1 riscv64 1.1.1f-1ubuntu2 [967 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main riscv64 openssl riscv64 1.1.1f-1ubuntu2 [595 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main riscv64 g++-9 riscv64 9.3.0-11ubuntu2 [6930 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main riscv64 gcc-9 riscv64 9.3.0-11ubuntu2 [6789 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main riscv64 libstdc++-9-dev riscv64 9.3.0-11ubuntu2 [3681 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgcc-9-dev riscv64 9.3.0-11ubuntu2 [404 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main riscv64 cpp-9 riscv64 9.3.0-11ubuntu2 [6047 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main riscv64 gcc-9-base riscv64 9.3.0-11ubuntu2 [19.4 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgpm2 riscv64 1.20.7-6 [14.2 kB] Get:41 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 make riscv64 4.2.1-1.3 [152 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 36.7 MB in 7s (5552 kB/s) (Reading database ... 9817 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.15-1ubuntu1_riscv64.deb ... Unpacking libcrypt-dev:riscv64 (1:4.4.15-1ubuntu1) over (1:4.4.10-10ubuntu4) ... Preparing to unpack .../libcrypt1_1%3a4.4.15-1ubuntu1_riscv64.deb ... Unpacking libcrypt1:riscv64 (1:4.4.15-1ubuntu1) over (1:4.4.10-10ubuntu4) ... Setting up libcrypt1:riscv64 (1:4.4.15-1ubuntu1) ... (Reading database ... 9817 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu6_riscv64.deb ... Unpacking base-files (11ubuntu6) over (11ubuntu5) ... Setting up base-files (11ubuntu6) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 9817 files and directories currently installed.) Preparing to unpack .../libperl5.30_5.30.0-10_riscv64.deb ... Unpacking libperl5.30:riscv64 (5.30.0-10) over (5.30.0-9build1) ... 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Processing triggers for libc-bin (2.31-0ubuntu9) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19247879 riscv64 groovy-proposed -c chroot:build-PACKAGEBUILD-19247879 --arch=riscv64 --dist=groovy-proposed --nolog ball_1.5.0+git20180813.37fc53c-6build1.dsc Initiating build PACKAGEBUILD-19247879 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on riscv64-qemu-lcy01-063.buildd +==================================================================================+ | ball 1.5.0+git20180813.37fc53c-6build1 (riscv64) Sat, 02 May 2020 06:39:46 +0000 | +==================================================================================+ Package: ball Version: 1.5.0+git20180813.37fc53c-6build1 Source Version: 1.5.0+git20180813.37fc53c-6build1 Distribution: groovy-proposed Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19247879/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/ball-JVkywJ/resolver-4d3XC8' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- ball_1.5.0+git20180813.37fc53c-6build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/ball-JVkywJ/ball-1.5.0+git20180813.37fc53c' with '<>' I: NOTICE: Log filtering will replace 'build/ball-JVkywJ' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dh-python, qtbase5-dev, qttools5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, libfftw3-dev, libeigen3-dev, libgsl0-dev, python3-dev, libxrender-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libboost-math-dev, libboost-system-dev, libasio-dev, libboost-regex-dev, libxmu-dev, libglew-dev, libx11-dev, tidy, chrpath, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 12), dh-python, qtbase5-dev, qttools5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, libfftw3-dev, libeigen3-dev, libgsl0-dev, python3-dev, libxrender-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libboost-math-dev, libboost-system-dev, libasio-dev, libboost-regex-dev, libxmu-dev, libglew-dev, libx11-dev, tidy, chrpath, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [537 B] Get:5 copy:/<>/apt_archive ./ Packages [591 B] Fetched 2091 B in 1s (2761 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libgpm2 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian iso-codes libarchive-zip-perl libarchive13 libasio-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.71-dev libboost-atomic1.71.0 libboost-chrono1.71-dev libboost-chrono1.71.0 libboost-date-time1.71-dev libboost-date-time1.71.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.71-dev libboost-iostreams1.71.0 libboost-math-dev libboost-math1.71-dev libboost-math1.71.0 libboost-regex-dev libboost-regex1.71-dev libboost-regex1.71.0 libboost-serialization1.71-dev libboost-serialization1.71.0 libboost-system-dev libboost-system1.71-dev libboost-system1.71.0 libboost-thread-dev libboost-thread1.71-dev libboost-thread1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcap2 libcap2-bin libcroco3 libcups2 libcurl4 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglew-dev libglew2.1 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libhyphen0 libice-dev libice6 libicu-dev libicu66 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libmtdev1 libncurses6 libnghttp2-14 liborc-0.4-0 libpcre2-16-0 libpipeline1 libprocps8 libpsl5 libpthread-stubs0-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 libqt5gui5 libqt5help5 libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5 libqt5sql5-sqlite libqt5test5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 libqt5xml5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm-dev libsm6 libssh-4 libsub-override-perl libtidy5deb1 libtool libuchardet0 libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxmu-dev libxmu-headers libxmu6 libxrender-dev libxrender1 libxshmfence1 libxslt1.1 libxt-dev libxt6 libxxf86vm1 m4 man-db mime-support pkg-config po-debconf procps python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3-sip python3-sip-dev python3.8 python3.8-dev python3.8-minimal qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin qtattributionsscanner-qt5 qtbase5-dev qtbase5-dev-tools qtchooser qttools5-dev qttools5-dev-tools sip-dev tidy tzdata ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make flex-doc gettext-doc libasprintf-dev libgettextpo-dev groff isoquery lrzip libboost-doc libboost1.71-doc libboost-container1.71-dev libboost-context1.71-dev libboost-contract1.71-dev libboost-coroutine1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev libboost-filesystem1.71-dev libboost-graph1.71-dev libboost-graph-parallel1.71-dev libboost-locale1.71-dev libboost-log1.71-dev libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev libboost-program-options1.71-dev libboost-python1.71-dev libboost-random1.71-dev libboost-stacktrace1.71-dev libboost-test1.71-dev libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev libboost1.71-tools-dev libmpfrc++-dev libntl-dev cups-common libeigen3-doc libfftw3-doc glew-utils gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libvisual-0.4-plugins gstreamer1.0-tools libice-doc icu-doc libthai0 qt5-image-formats-plugins qtwayland5 qt5-qmltooling-plugins lm-sensors libsm-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc libxcb-doc libxext-doc libxt-doc m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-sip-doc python3.8-venv python3.8-doc binfmt-support qt5-doc default-libmysqlclient-dev firebird-dev libpq-dev libsqlite3-dev unixodbc-dev Recommended packages: libfl-dev curl | wget | lynx libssl-dev libboost-date-time-dev libpam-cap dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs gstreamer1.0-plugins-base krb5-locales publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme geoclue-2.0 libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libwacom-bin libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdmainutils chrpath cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base groff-base icu-devtools intltool-debian iso-codes libarchive-zip-perl libarchive13 libasio-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.71-dev libboost-atomic1.71.0 libboost-chrono1.71-dev libboost-chrono1.71.0 libboost-date-time1.71-dev libboost-date-time1.71.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.71-dev libboost-iostreams1.71.0 libboost-math-dev libboost-math1.71-dev libboost-math1.71.0 libboost-regex-dev libboost-regex1.71-dev libboost-regex1.71.0 libboost-serialization1.71-dev libboost-serialization1.71.0 libboost-system-dev libboost-system1.71-dev libboost-system1.71.0 libboost-thread-dev libboost-thread1.71-dev libboost-thread1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcap2 libcap2-bin libcroco3 libcups2 libcurl4 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libglew-dev libglew2.1 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libhyphen0 libice-dev libice6 libicu-dev libicu66 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libmtdev1 libncurses6 libnghttp2-14 liborc-0.4-0 libpcre2-16-0 libpipeline1 libprocps8 libpsl5 libpthread-stubs0-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 libqt5gui5 libqt5help5 libqt5network5 libqt5opengl5 libqt5opengl5-dev libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5 libqt5sql5-sqlite libqt5test5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 libqt5xml5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm-dev libsm6 libssh-4 libsub-override-perl libtidy5deb1 libtool libuchardet0 libuv1 libvulkan-dev libvulkan1 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxmu-dev libxmu-headers libxmu6 libxrender-dev libxrender1 libxshmfence1 libxslt1.1 libxt-dev libxt6 libxxf86vm1 m4 man-db mime-support pkg-config po-debconf procps python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3-sip python3-sip-dev python3.8 python3.8-dev python3.8-minimal qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin qtattributionsscanner-qt5 qtbase5-dev qtbase5-dev-tools qtchooser qttools5-dev qttools5-dev-tools sbuild-build-depends-main-dummy sip-dev tidy tzdata ucf x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 281 newly installed, 0 to remove and 0 not upgraded. Need to get 131 MB of archives. After this operation, 875 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1020 B] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libpython3.8-minimal riscv64 3.8.2-1ubuntu1.1 [699 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main riscv64 libexpat1 riscv64 2.2.9-1build1 [68.8 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 python3.8-minimal riscv64 3.8.2-1ubuntu1.1 [1447 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main riscv64 python3-minimal riscv64 3.8.2-0ubuntu2 [23.6 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main riscv64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main riscv64 libmpdec2 riscv64 2.4.2-3 [79.2 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libpython3.8-stdlib riscv64 3.8.2-1ubuntu1.1 [1558 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 python3.8 riscv64 3.8.2-1ubuntu1.1 [364 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpython3-stdlib riscv64 3.8.2-0ubuntu2 [7072 B] Get:11 http://ftpmaster.internal/ubuntu groovy/main riscv64 python3 riscv64 3.8.2-0ubuntu2 [47.6 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main riscv64 libbsd0 riscv64 0.10.0-1 [42.0 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main riscv64 bsdmainutils riscv64 11.1.2ubuntu3 [176 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main riscv64 libuchardet0 riscv64 0.0.6-3build1 [64.9 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main riscv64 groff-base riscv64 1.22.4-4build1 [816 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpipeline1 riscv64 1.5.2-2build1 [23.9 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main riscv64 man-db riscv64 2.9.1-1 [1075 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsigsegv2 riscv64 2.12-2 [13.0 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main riscv64 m4 riscv64 1.4.18-4 [188 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main riscv64 flex riscv64 2.6.4-6.2 [300 kB] Get:21 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libglib2.0-0 riscv64 2.64.2-1 [1123 kB] Get:22 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcap2 riscv64 1:2.33-1 [16.5 kB] Get:23 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcap2-bin riscv64 1:2.33-1 [25.8 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgstreamer1.0-0 riscv64 1.16.2-2 [744 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main riscv64 liborc-0.4-0 riscv64 1:0.4.31-1 [160 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main riscv64 iso-codes all 4.4-1 [2695 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgstreamer-plugins-base1.0-0 riscv64 1.16.2-4 [631 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main riscv64 libhyphen0 riscv64 2.8.8-7 [25.2 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main riscv64 tzdata all 2019c-3ubuntu1 [294 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main riscv64 libicu66 riscv64 66.1-2ubuntu2 [8406 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main riscv64 libjpeg-turbo8 riscv64 2.0.3-0ubuntu1 [101 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main riscv64 libjpeg8 riscv64 8c-2ubuntu8 [2224 B] Get:33 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 libdouble-conversion3 riscv64 3.1.5-5build1 [36.2 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpcre2-16-0 riscv64 10.34-7 [107 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5core5a riscv64 5.12.8+dfsg-0ubuntu1 [2022 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfreetype6 riscv64 2.10.1-2 [313 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main riscv64 ucf all 3.0038+nmu1 [51.6 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main riscv64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main riscv64 fontconfig-config all 2.13.1-2ubuntu3 [28.8 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfontconfig1 riscv64 2.13.1-2ubuntu3 [104 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main riscv64 fontconfig riscv64 2.13.1-2ubuntu3 [169 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdrm-common all 2.4.101-2 [5540 B] Get:43 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdrm2 riscv64 2.4.101-2 [30.0 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglvnd0 riscv64 1.3.1-1 [49.8 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwayland-server0 riscv64 1.18.0-1 [26.5 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgbm1 riscv64 20.0.4-2ubuntu1 [25.1 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglapi-mesa riscv64 20.0.4-2ubuntu1 [31.9 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwayland-client0 riscv64 1.18.0-1 [20.7 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main riscv64 libx11-xcb1 riscv64 2:1.6.9-2ubuntu1 [8812 B] Get:50 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxau6 riscv64 1:1.0.9-0ubuntu1 [6788 B] Get:51 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxdmcp6 riscv64 1:1.1.3-0ubuntu1 [9952 B] Get:52 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb1 riscv64 1.14-2 [37.9 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-dri2-0 riscv64 1.14-2 [6124 B] Get:54 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-dri3-0 riscv64 1.14-2 [5852 B] Get:55 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-present0 riscv64 1.14-2 [5044 B] Get:56 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-sync1 riscv64 1.14-2 [7588 B] Get:57 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-xfixes0 riscv64 1.14-2 [8152 B] Get:58 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxshmfence1 riscv64 1.3-1 [4584 B] Get:59 http://ftpmaster.internal/ubuntu groovy/main riscv64 libegl-mesa0 riscv64 20.0.4-2ubuntu1 [82.2 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main riscv64 libegl1 riscv64 1.3.1-1 [27.6 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main riscv64 libx11-data all 2:1.6.9-2ubuntu1 [113 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main riscv64 libx11-6 riscv64 2:1.6.9-2ubuntu1 [537 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-glx0 riscv64 1.14-2 [18.9 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxdamage1 riscv64 1:1.1.5-2 [6316 B] Get:65 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxext6 riscv64 2:1.3.4-0ubuntu1 [25.6 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxfixes3 riscv64 1:5.0.3-2 [9748 B] Get:67 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxxf86vm1 riscv64 1:1.1.4-1build1 [9488 B] Get:68 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdrm-nouveau2 riscv64 2.4.101-2 [14.2 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdrm-radeon1 riscv64 2.4.101-2 [19.2 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:71 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsensors5 riscv64 1:3.6.0-2ubuntu1 [24.4 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgl1-mesa-dri riscv64 20.0.4-2ubuntu1 [4908 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglx-mesa0 riscv64 20.0.4-2ubuntu1 [133 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglx0 riscv64 1.3.1-1 [24.2 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgl1 riscv64 1.3.1-1 [98.9 kB] Get:76 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libgraphite2-3 riscv64 1.3.14-1 [70.5 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main riscv64 libharfbuzz0b riscv64 2.6.4-1ubuntu4 [397 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/main riscv64 x11-common all 1:7.7+19ubuntu14 [22.3 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main riscv64 libice6 riscv64 2:1.0.10-0ubuntu1 [34.7 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main riscv64 libevdev2 riscv64 1.9.0+dfsg-1 [27.1 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main riscv64 libmtdev1 riscv64 1.1.5-1.1 [13.6 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgudev-1.0-0 riscv64 1:233-1 [11.9 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwacom-common all 1.3-2ubuntu1 [44.3 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwacom2 riscv64 1.3-2ubuntu1 [17.0 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main riscv64 libinput-bin riscv64 1.15.5-1 [17.6 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/main riscv64 libinput10 riscv64 1.15.5-1 [96.0 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdbus-1-3 riscv64 1.12.16-2ubuntu2 [161 kB] Get:88 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5dbus5 riscv64 5.12.8+dfsg-0ubuntu1 [187 kB] Get:89 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5network5 riscv64 5.12.8+dfsg-0ubuntu1 [591 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsm6 riscv64 2:1.2.3-1 [14.6 kB] Get:91 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-icccm4 riscv64 0.4.1-1.1 [9328 B] Get:92 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-shm0 riscv64 1.14-2 [5032 B] Get:93 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-util1 riscv64 0.4.0-0ubuntu3 [10.2 kB] Get:94 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-image0 riscv64 0.4.0-1build1 [11.3 kB] Get:95 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-keysyms1 riscv64 0.4.0-1build1 [7704 B] Get:96 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-randr0 riscv64 1.14-2 [14.1 kB] Get:97 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-render0 riscv64 1.14-2 [12.8 kB] Get:98 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-render-util0 riscv64 0.3.9-1build1 [8948 B] Get:99 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-shape0 riscv64 1.14-2 [5292 B] Get:100 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-xinerama0 riscv64 1.14-2 [4804 B] Get:101 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-xinput0 riscv64 1.14-2 [25.2 kB] Get:102 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb-xkb1 riscv64 1.14-2 [26.0 kB] Get:103 http://ftpmaster.internal/ubuntu groovy/main riscv64 xkb-data all 2.29-2 [349 kB] Get:104 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxkbcommon0 riscv64 0.10.0-1 [91.1 kB] Get:105 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxkbcommon-x11-0 riscv64 0.10.0-1 [11.9 kB] Get:106 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxrender1 riscv64 1:0.9.10-1 [16.8 kB] Get:107 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5gui5 riscv64 5.12.8+dfsg-0ubuntu1 [2541 kB] Get:108 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5positioning5 riscv64 5.12.8+dfsg-0ubuntu1 [178 kB] Get:109 http://ftpmaster.internal/ubuntu groovy/main riscv64 libavahi-common-data riscv64 0.7-4ubuntu7 [21.3 kB] Get:110 http://ftpmaster.internal/ubuntu groovy/main riscv64 libavahi-common3 riscv64 0.7-4ubuntu7 [18.3 kB] Get:111 http://ftpmaster.internal/ubuntu groovy/main riscv64 libavahi-client3 riscv64 0.7-4ubuntu7 [22.2 kB] Get:112 http://ftpmaster.internal/ubuntu groovy/main riscv64 libkrb5support0 riscv64 1.17-6ubuntu4 [28.3 kB] Get:113 http://ftpmaster.internal/ubuntu groovy/main riscv64 libk5crypto3 riscv64 1.17-6ubuntu4 [91.8 kB] Get:114 http://ftpmaster.internal/ubuntu groovy/main riscv64 libkeyutils1 riscv64 1.6.1-2ubuntu1 [9192 B] Get:115 http://ftpmaster.internal/ubuntu groovy/main riscv64 libkrb5-3 riscv64 1.17-6ubuntu4 [295 kB] Get:116 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgssapi-krb5-2 riscv64 1.17-6ubuntu4 [107 kB] Get:117 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libcups2 riscv64 2.3.3-1 [210 kB] Get:118 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5widgets5 riscv64 5.12.8+dfsg-0ubuntu1 [2078 kB] Get:119 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5printsupport5 riscv64 5.12.8+dfsg-0ubuntu1 [178 kB] Get:120 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5qml5 riscv64 5.12.8-0ubuntu1 [1365 kB] Get:121 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5quick5 riscv64 5.12.8-0ubuntu1 [1179 kB] Get:122 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5sensors5 riscv64 5.12.8-0ubuntu1 [96.7 kB] Get:123 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5webchannel5 riscv64 5.12.8-0ubuntu1 [45.4 kB] Get:124 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwebp6 riscv64 0.6.1-2 [150 kB] Get:125 http://ftpmaster.internal/ubuntu groovy/main riscv64 libbrotli1 riscv64 1.0.7-6.1 [279 kB] Get:126 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwoff1 riscv64 1.0.2-1build2 [42.1 kB] Get:127 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxml2 riscv64 2.9.10+dfsg-5 [559 kB] Get:128 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxslt1.1 riscv64 1.1.34-4 [135 kB] Get:129 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5webkit5 riscv64 5.212.0~alpha4-1ubuntu2 [9367 kB] Get:130 http://ftpmaster.internal/ubuntu groovy/main riscv64 libncurses6 riscv64 6.2-1 [86.2 kB] Get:131 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libprocps8 riscv64 2:3.3.16-4ubuntu1 [29.7 kB] Get:132 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 procps riscv64 2:3.3.16-4ubuntu1 [224 kB] Get:133 http://ftpmaster.internal/ubuntu groovy/main riscv64 libmagic-mgc riscv64 1:5.38-4 [218 kB] Get:134 http://ftpmaster.internal/ubuntu groovy/main riscv64 libmagic1 riscv64 1:5.38-4 [70.5 kB] Get:135 http://ftpmaster.internal/ubuntu groovy/main riscv64 file riscv64 1:5.38-4 [22.5 kB] Get:136 http://ftpmaster.internal/ubuntu groovy/main riscv64 libelf1 riscv64 0.176-1.1build1 [41.8 kB] Get:137 http://ftpmaster.internal/ubuntu groovy/main riscv64 gettext-base riscv64 0.19.8.1-10build1 [47.4 kB] Get:138 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpsl5 riscv64 0.21.0-1ubuntu1 [50.5 kB] Get:139 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libuv1 riscv64 1.35.0-2ubuntu1 [69.6 kB] Get:140 http://ftpmaster.internal/ubuntu groovy/main riscv64 autoconf all 2.69-11.1 [321 kB] Get:141 http://ftpmaster.internal/ubuntu groovy/main riscv64 autotools-dev all 20180224.1 [39.6 kB] Get:142 http://ftpmaster.internal/ubuntu groovy/main riscv64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:143 http://ftpmaster.internal/ubuntu groovy/main riscv64 autopoint all 0.19.8.1-10build1 [412 kB] Get:144 http://ftpmaster.internal/ubuntu groovy/main riscv64 bison riscv64 2:3.5.3+dfsg-1 [636 kB] Get:145 http://ftpmaster.internal/ubuntu groovy/universe riscv64 chrpath riscv64 0.16-2 [12.9 kB] Get:146 http://ftpmaster.internal/ubuntu groovy/main riscv64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] Get:147 http://ftpmaster.internal/ubuntu groovy/main riscv64 libarchive13 riscv64 3.4.0-2ubuntu1 [302 kB] Get:148 http://ftpmaster.internal/ubuntu groovy/main riscv64 libroken18-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [36.5 kB] Get:149 http://ftpmaster.internal/ubuntu groovy/main riscv64 libasn1-8-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [145 kB] Get:150 http://ftpmaster.internal/ubuntu groovy/main riscv64 libheimbase1-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [24.7 kB] Get:151 http://ftpmaster.internal/ubuntu groovy/main riscv64 libhcrypto4-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [86.5 kB] Get:152 http://ftpmaster.internal/ubuntu groovy/main riscv64 libwind0-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [47.0 kB] Get:153 http://ftpmaster.internal/ubuntu groovy/main riscv64 libhx509-5-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [90.1 kB] Get:154 http://ftpmaster.internal/ubuntu groovy/main riscv64 libkrb5-26-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [175 kB] Get:155 http://ftpmaster.internal/ubuntu groovy/main riscv64 libheimntlm0-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [13.4 kB] Get:156 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgssapi3-heimdal riscv64 7.7.0+dfsg-1ubuntu1 [83.3 kB] Get:157 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsasl2-modules-db riscv64 2.1.27+dfsg-2 [13.7 kB] Get:158 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsasl2-2 riscv64 2.1.27+dfsg-2 [45.2 kB] Get:159 http://ftpmaster.internal/ubuntu groovy/main riscv64 libldap-common all 2.4.49+dfsg-2ubuntu1 [17.3 kB] Get:160 http://ftpmaster.internal/ubuntu groovy/main riscv64 libldap-2.4-2 riscv64 2.4.49+dfsg-2ubuntu1 [137 kB] Get:161 http://ftpmaster.internal/ubuntu groovy/main riscv64 libnghttp2-14 riscv64 1.40.0-1build1 [70.9 kB] Get:162 http://ftpmaster.internal/ubuntu groovy/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-2build1 [50.8 kB] Get:163 http://ftpmaster.internal/ubuntu groovy/main riscv64 libssh-4 riscv64 0.9.3-2ubuntu2 [147 kB] Get:164 http://ftpmaster.internal/ubuntu groovy/main riscv64 libcurl4 riscv64 7.68.0-1ubuntu2 [208 kB] Get:165 http://ftpmaster.internal/ubuntu groovy/main riscv64 libjsoncpp1 riscv64 1.7.4-3.1ubuntu2 [73.1 kB] Get:166 http://ftpmaster.internal/ubuntu groovy/main riscv64 librhash0 riscv64 1.3.9-1 [125 kB] Get:167 http://ftpmaster.internal/ubuntu groovy/main riscv64 cmake riscv64 3.16.3-1ubuntu1 [3642 kB] Get:168 http://ftpmaster.internal/ubuntu groovy/main riscv64 libtool all 2.4.6-14 [161 kB] Get:169 http://ftpmaster.internal/ubuntu groovy/main riscv64 dh-autoreconf all 19 [16.1 kB] Get:170 http://ftpmaster.internal/ubuntu groovy/main riscv64 libdebhelper-perl all 13ubuntu1 [62.5 kB] Get:171 http://ftpmaster.internal/ubuntu groovy/main riscv64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:172 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsub-override-perl all 0.09-2 [9532 B] Get:173 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfile-stripnondeterminism-perl all 1.8.0-1 [16.2 kB] Get:174 http://ftpmaster.internal/ubuntu groovy/main riscv64 dh-strip-nondeterminism all 1.8.0-1 [5228 B] Get:175 http://ftpmaster.internal/ubuntu groovy/main riscv64 dwz riscv64 0.13-5 [147 kB] Get:176 http://ftpmaster.internal/ubuntu groovy/main riscv64 libcroco3 riscv64 0.6.13-1 [71.1 kB] Get:177 http://ftpmaster.internal/ubuntu groovy/main riscv64 gettext riscv64 0.19.8.1-10build1 [844 kB] Get:178 http://ftpmaster.internal/ubuntu groovy/main riscv64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:179 http://ftpmaster.internal/ubuntu groovy/main riscv64 po-debconf all 1.0.21 [233 kB] Get:180 http://ftpmaster.internal/ubuntu groovy/main riscv64 debhelper all 13ubuntu1 [877 kB] Get:181 http://ftpmaster.internal/ubuntu groovy/main riscv64 python3-lib2to3 all 3.8.2-1ubuntu1 [74.1 kB] Get:182 http://ftpmaster.internal/ubuntu groovy/main riscv64 python3-distutils all 3.8.2-1ubuntu1 [140 kB] Get:183 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 dh-python all 4.20200315 [85.8 kB] Get:184 http://ftpmaster.internal/ubuntu groovy/main riscv64 icu-devtools riscv64 66.1-2ubuntu2 [177 kB] Get:185 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libasio-dev all 1:1.12.2-1 [288 kB] Get:186 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost1.71-dev riscv64 1.71.0-6ubuntu6 [9068 kB] Get:187 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-atomic1.71.0 riscv64 1.71.0-6ubuntu6 [205 kB] Get:188 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-atomic1.71-dev riscv64 1.71.0-6ubuntu6 [205 kB] Get:189 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-chrono1.71.0 riscv64 1.71.0-6ubuntu6 [216 kB] Get:190 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-chrono1.71-dev riscv64 1.71.0-6ubuntu6 [275 kB] Get:191 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-date-time1.71.0 riscv64 1.71.0-6ubuntu6 [218 kB] Get:192 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-serialization1.71.0 riscv64 1.71.0-6ubuntu6 [299 kB] Get:193 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-serialization1.71-dev riscv64 1.71.0-6ubuntu6 [672 kB] Get:194 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-date-time1.71-dev riscv64 1.71.0-6ubuntu6 [259 kB] Get:195 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-dev riscv64 1.71.0.0ubuntu2 [3600 B] Get:196 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-regex1.71.0 riscv64 1.71.0-6ubuntu6 [452 kB] Get:197 http://ftpmaster.internal/ubuntu groovy/main riscv64 libicu-dev riscv64 66.1-2ubuntu2 [12.5 MB] Get:198 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-regex1.71-dev riscv64 1.71.0-6ubuntu6 [1604 kB] Get:199 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-iostreams1.71.0 riscv64 1.71.0-6ubuntu6 [234 kB] Get:200 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-iostreams1.71-dev riscv64 1.71.0-6ubuntu6 [340 kB] Get:201 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-iostreams-dev riscv64 1.71.0.0ubuntu2 [3380 B] Get:202 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-math1.71.0 riscv64 1.71.0-6ubuntu6 [595 kB] Get:203 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-math1.71-dev riscv64 1.71.0-6ubuntu6 [2591 kB] Get:204 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-math-dev riscv64 1.71.0.0ubuntu2 [3580 B] Get:205 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libboost-regex-dev riscv64 1.71.0.0ubuntu2 [3656 B] Get:206 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-system1.71.0 riscv64 1.71.0-6ubuntu6 [205 kB] Get:207 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-system1.71-dev riscv64 1.71.0-6ubuntu6 [205 kB] Get:208 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-system-dev riscv64 1.71.0.0ubuntu2 [3536 B] Get:209 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-thread1.71.0 riscv64 1.71.0-6ubuntu6 [247 kB] Get:210 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-thread1.71-dev riscv64 1.71.0-6ubuntu6 [355 kB] Get:211 http://ftpmaster.internal/ubuntu groovy/main riscv64 libboost-thread-dev riscv64 1.71.0.0ubuntu2 [3416 B] Get:212 http://ftpmaster.internal/ubuntu groovy/main riscv64 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:213 http://ftpmaster.internal/ubuntu groovy/main riscv64 x11proto-dev all 2019.2-1ubuntu1 [594 kB] Get:214 http://ftpmaster.internal/ubuntu groovy/main riscv64 x11proto-core-dev all 2019.2-1ubuntu1 [2620 B] Get:215 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxau-dev riscv64 1:1.0.9-0ubuntu1 [12.1 kB] Get:216 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxdmcp-dev riscv64 1:1.1.3-0ubuntu1 [31.7 kB] Get:217 http://ftpmaster.internal/ubuntu groovy/main riscv64 xtrans-dev all 1.4.0-1 [68.9 kB] Get:218 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpthread-stubs0-dev riscv64 0.4-1 [5380 B] Get:219 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxcb1-dev riscv64 1.14-2 [125 kB] Get:220 http://ftpmaster.internal/ubuntu groovy/main riscv64 libx11-dev riscv64 2:1.6.9-2ubuntu1 [1031 kB] Get:221 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglx-dev riscv64 1.3.1-1 [14.0 kB] Get:222 http://ftpmaster.internal/ubuntu groovy/main riscv64 libgl-dev riscv64 1.3.1-1 [97.8 kB] Get:223 http://ftpmaster.internal/ubuntu groovy/main riscv64 libegl-dev riscv64 1.3.1-1 [16.9 kB] Get:224 http://ftpmaster.internal/ubuntu groovy/main riscv64 libexpat1-dev riscv64 2.2.9-1build1 [224 kB] Get:225 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfftw3-double3 riscv64 3.3.8-2ubuntu1 [469 kB] Get:226 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfftw3-single3 riscv64 3.3.8-2ubuntu1 [462 kB] Get:227 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfftw3-bin riscv64 3.3.8-2ubuntu1 [25.3 kB] Get:228 http://ftpmaster.internal/ubuntu groovy/main riscv64 libfftw3-dev riscv64 3.3.8-2ubuntu1 [3326 kB] Get:229 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libglew2.1 riscv64 2.1.0-4 [151 kB] Get:230 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglu1-mesa riscv64 9.0.1-1build1 [159 kB] Get:231 http://ftpmaster.internal/ubuntu groovy/main riscv64 libglu1-mesa-dev riscv64 9.0.1-1build1 [464 kB] Get:232 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libglew-dev riscv64 2.1.0-4 [134 kB] Get:233 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libgslcblas0 riscv64 2.5+dfsg-6build1 [69.1 kB] Get:234 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libgsl23 riscv64 2.5+dfsg-6build1 [818 kB] Get:235 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libgsl-dev riscv64 2.5+dfsg-6build1 [2516 kB] Get:236 http://ftpmaster.internal/ubuntu groovy/main riscv64 libice-dev riscv64 2:1.0.10-0ubuntu1 [87.5 kB] Get:237 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libpython3.8 riscv64 3.8.2-1ubuntu1.1 [1450 kB] Get:238 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 libpython3.8-dev riscv64 3.8.2-1ubuntu1.1 [8372 kB] Get:239 http://ftpmaster.internal/ubuntu groovy/main riscv64 libpython3-dev riscv64 3.8.2-0ubuntu2 [7236 B] Get:240 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5concurrent5 riscv64 5.12.8+dfsg-0ubuntu1 [32.8 kB] Get:241 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5xml5 riscv64 5.12.8+dfsg-0ubuntu1 [96.0 kB] Get:242 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5designer5 riscv64 5.12.8-0ubuntu1 [2685 kB] Get:243 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5designercomponents5 riscv64 5.12.8-0ubuntu1 [638 kB] Get:244 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5sql5 riscv64 5.12.8+dfsg-0ubuntu1 [109 kB] Get:245 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5help5 riscv64 5.12.8-0ubuntu1 [118 kB] Get:246 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5opengl5 riscv64 5.12.8+dfsg-0ubuntu1 [122 kB] Get:247 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5test5 riscv64 5.12.8+dfsg-0ubuntu1 [124 kB] Get:248 http://ftpmaster.internal/ubuntu groovy/main riscv64 libvulkan1 riscv64 1.2.135.0-2 [85.7 kB] Get:249 http://ftpmaster.internal/ubuntu groovy/main riscv64 libvulkan-dev riscv64 1.2.135.0-2 [527 kB] Get:250 http://ftpmaster.internal/ubuntu groovy/main riscv64 x11proto-xext-dev all 2019.2-1ubuntu1 [2616 B] Get:251 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxext-dev riscv64 2:1.3.4-0ubuntu1 [113 kB] Get:252 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qt5-qmake-bin riscv64 5.12.8+dfsg-0ubuntu1 [980 kB] Get:253 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qtchooser riscv64 66-2build1 [23.3 kB] Get:254 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qt5-qmake riscv64 5.12.8+dfsg-0ubuntu1 [189 kB] Get:255 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qtbase5-dev-tools riscv64 5.12.8+dfsg-0ubuntu1 [654 kB] Get:256 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qtbase5-dev riscv64 5.12.8+dfsg-0ubuntu1 [1068 kB] Get:257 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5opengl5-dev riscv64 5.12.8+dfsg-0ubuntu1 [39.8 kB] Get:258 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5quickwidgets5 riscv64 5.12.8-0ubuntu1 [36.9 kB] Get:259 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libqt5sql5-sqlite riscv64 5.12.8+dfsg-0ubuntu1 [44.1 kB] Get:260 http://ftpmaster.internal/ubuntu groovy/main riscv64 libsm-dev riscv64 2:1.2.3-1 [30.1 kB] Get:261 http://ftpmaster.internal/ubuntu groovy/main riscv64 libtidy5deb1 riscv64 2:5.6.0-11 [178 kB] Get:262 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxt6 riscv64 1:1.1.5-1 [136 kB] Get:263 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxt-dev riscv64 1:1.1.5-1 [558 kB] Get:264 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxmu6 riscv64 2:1.1.3-0ubuntu1 [40.2 kB] Get:265 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxmu-headers all 2:1.1.3-0ubuntu1 [54.2 kB] Get:266 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxmu-dev riscv64 2:1.1.3-0ubuntu1 [92.3 kB] Get:267 http://ftpmaster.internal/ubuntu groovy/main riscv64 libxrender-dev riscv64 1:0.9.10-1 [41.2 kB] Get:268 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 pkg-config riscv64 0.29.2-1ubuntu1 [43.7 kB] Get:269 http://ftpmaster.internal/ubuntu groovy/main riscv64 zlib1g-dev riscv64 1:1.2.11.dfsg-2ubuntu1 [207 kB] Get:270 http://ftpmaster.internal/ubuntu groovy-proposed/main riscv64 python3.8-dev riscv64 3.8.2-1ubuntu1.1 [521 kB] Get:271 http://ftpmaster.internal/ubuntu groovy/main riscv64 python3-dev riscv64 3.8.2-0ubuntu2 [1216 B] Get:272 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 python3-sip riscv64 4.19.22+dfsg-1 [76.7 kB] Get:273 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 sip-dev riscv64 4.19.22+dfsg-1 [153 kB] Get:274 http://ftpmaster.internal/ubuntu groovy-proposed/universe riscv64 python3-sip-dev riscv64 4.19.22+dfsg-1 [22.3 kB] Get:275 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qhelpgenerator-qt5 riscv64 5.12.8-0ubuntu1 [61.6 kB] Get:276 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qt5-assistant riscv64 5.12.8-0ubuntu1 [750 kB] Get:277 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qtattributionsscanner-qt5 riscv64 5.12.8-0ubuntu1 [24.9 kB] Get:278 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qttools5-dev-tools riscv64 5.12.8-0ubuntu1 [1004 kB] Get:279 http://ftpmaster.internal/ubuntu groovy/universe riscv64 qttools5-dev riscv64 5.12.8-0ubuntu1 [700 kB] Get:280 http://ftpmaster.internal/ubuntu groovy/universe riscv64 tidy riscv64 2:5.6.0-11 [27.1 kB] Get:281 http://ftpmaster.internal/ubuntu groovy/universe riscv64 libeigen3-dev all 3.3.7-2 [815 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 131 MB in 22s (5865 kB/s) Selecting previously unselected package libpython3.8-minimal:riscv64. (Reading database ... 9817 files and directories currently installed.) Preparing to unpack .../libpython3.8-minimal_3.8.2-1ubuntu1.1_riscv64.deb ... Unpacking libpython3.8-minimal:riscv64 (3.8.2-1ubuntu1.1) ... Selecting previously unselected package libexpat1:riscv64. Preparing to unpack .../libexpat1_2.2.9-1build1_riscv64.deb ... Unpacking libexpat1:riscv64 (2.2.9-1build1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.2-1ubuntu1.1_riscv64.deb ... Unpacking python3.8-minimal (3.8.2-1ubuntu1.1) ... Setting up libpython3.8-minimal:riscv64 (3.8.2-1ubuntu1.1) ... Setting up libexpat1:riscv64 (2.2.9-1build1) ... Setting up python3.8-minimal (3.8.2-1ubuntu1.1) ... Selecting previously unselected package python3-minimal. (Reading database ... 10108 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-0ubuntu2_riscv64.deb ... Unpacking python3-minimal (3.8.2-0ubuntu2) ... 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Setting up libxcb-present0:riscv64 (1.14-2) ... Setting up libxdmcp-dev:riscv64 (1:1.1.3-0ubuntu1) ... Setting up libwind0-heimdal:riscv64 (7.7.0+dfsg-1ubuntu1) ... Setting up libxcb-xinerama0:riscv64 (1.14-2) ... Setting up libxcb-sync1:riscv64 (1.14-2) ... Setting up x11proto-core-dev (2019.2-1ubuntu1) ... Setting up libpython3.8:riscv64 (3.8.2-1ubuntu1.1) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:riscv64 (0.10.0-1) ... Setting up libeigen3-dev (3.3.7-2) ... Setting up libgssapi-krb5-2:riscv64 (1.17-6ubuntu4) ... Setting up libboost-serialization1.71-dev:riscv64 (1.71.0-6ubuntu6) ... Setting up icu-devtools (66.1-2ubuntu2) ... Setting up libboost-regex1.71.0:riscv64 (1.71.0-6ubuntu6) ... Setting up libqt5core5a:riscv64 (5.12.8+dfsg-0ubuntu1) ... 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Setting up python3-lib2to3 (3.8.2-1ubuntu1) ... Setting up libwacom2:riscv64 (1.3-2ubuntu1) ... Setting up libsm6:riscv64 (2:1.2.3-1) ... Setting up libfftw3-dev:riscv64 (3.3.8-2ubuntu1) ... Setting up libicu-dev:riscv64 (66.1-2ubuntu2) ... Setting up libxml2:riscv64 (2.9.10+dfsg-5) ... Setting up libqt5concurrent5:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libavahi-client3:riscv64 (0.7-4ubuntu7) ... Setting up python3-sip (4.19.22+dfsg-1) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-distutils (3.8.2-1ubuntu1) ... Setting up dh-python (4.20200315) ... Setting up libxcb-dri3-0:riscv64 (1.14-2) ... Setting up fontconfig (2.13.1-2ubuntu3) ... Regenerating fonts cache... done. Setting up flex (2.6.4-6.2) ... Setting up libdrm-nouveau2:riscv64 (2.4.101-2) ... Setting up libxdamage1:riscv64 (1:1.1.5-2) ... Setting up libxcb1-dev:riscv64 (1.14-2) ... 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Setting up libglew2.1:riscv64 (2.1.0-4) ... Setting up libglx-dev:riscv64 (1.3.1-1) ... Setting up libglu1-mesa:riscv64 (9.0.1-1build1) ... Setting up libgl-dev:riscv64 (1.3.1-1) ... Setting up libegl-dev:riscv64 (1.3.1-1) ... Setting up python3-sip-dev (4.19.22+dfsg-1) ... Setting up po-debconf (1.0.21) ... Setting up libqt5gui5:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libldap-2.4-2:riscv64 (2.4.49+dfsg-2ubuntu1) ... Setting up libqt5widgets5:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libxmu-dev:riscv64 (2:1.1.3-0ubuntu1) ... Setting up libqt5help5:riscv64 (5.12.8-0ubuntu1) ... Setting up libqt5printsupport5:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libglu1-mesa-dev:riscv64 (9.0.1-1build1) ... Setting up qtbase5-dev:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libqt5opengl5:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up libcurl4:riscv64 (7.68.0-1ubuntu2) ... Setting up libqt5quick5:riscv64 (5.12.8-0ubuntu1) ... Setting up libqt5designer5:riscv64 (5.12.8-0ubuntu1) ... Setting up libqt5opengl5-dev:riscv64 (5.12.8+dfsg-0ubuntu1) ... Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... Setting up libqt5webkit5:riscv64 (5.212.0~alpha4-1ubuntu2) ... Setting up libqt5designercomponents5:riscv64 (5.12.8-0ubuntu1) ... Setting up libqt5quickwidgets5:riscv64 (5.12.8-0ubuntu1) ... Setting up libglew-dev:riscv64 (2.1.0-4) ... Setting up qt5-assistant (5.12.8-0ubuntu1) ... Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... Setting up cmake (3.16.3-1ubuntu1) ... Setting up qttools5-dev:riscv64 (5.12.8-0ubuntu1) ... Setting up debhelper (13ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 (riscv64) Toolchain package versions: binutils_2.34-6ubuntu1 dpkg-dev_1.19.7ubuntu3 g++-9_9.3.0-11ubuntu2 gcc-9_9.3.0-11ubuntu2 libc6-dev_2.31-0ubuntu9 libstdc++-9-dev_9.3.0-11ubuntu2 libstdc++6_10-20200425-1ubuntu2 linux-libc-dev_5.4.0-24.28 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.0.2 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu6 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ubuntu-keyring_2020.02.11.2 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu9 x11-common_1:7.7+19ubuntu14 x11proto-core-dev_2019.2-1ubuntu1 x11proto-dev_2019.2-1ubuntu1 x11proto-xext-dev_2019.2-1ubuntu1 xkb-data_2.29-2 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.4.0-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: ball Binary: libball1.5-data, libball1.5, libball1.5-dev, libballview1.5, libballview1.5-dev, python3-ball, ballview, libball1.5-doc Architecture: any all Version: 1.5.0+git20180813.37fc53c-6build1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Steffen Moeller Homepage: http://www.ball-project.org/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/ball Vcs-Git: https://salsa.debian.org/med-team/ball.git Build-Depends: debhelper-compat (= 12), dh-python, qtbase5-dev, qttools5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev [amd64 arm64 armhf i386 mipsel], libfftw3-dev, libeigen3-dev, libgsl0-dev, python3-dev, libxrender-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libboost-math-dev, libboost-system-dev, libasio-dev, libboost-regex-dev, libxmu-dev, libglew-dev, libx11-dev, tidy, chrpath Build-Depends-Indep: doxygen, graphviz, ghostscript, texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra Package-List: ballview deb science optional arch=any libball1.5 deb libs optional arch=any libball1.5-data deb science optional arch=all libball1.5-dev deb libdevel optional arch=any libball1.5-doc deb doc optional arch=all libballview1.5 deb libs optional arch=any libballview1.5-dev deb libdevel optional arch=any python3-ball deb python optional arch=any Checksums-Sha1: 696a5708b583fdd96051e4496c3a4d8e188f349d 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz 9c39843b3ab5f873c4f4513a996ece230b4a5892 13740 ball_1.5.0+git20180813.37fc53c-6build1.debian.tar.xz Checksums-Sha256: 88e95068ced3bb8f50440dd22d3dd9aa56c6d7653a5a978ec163daafd1d90720 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz 5b57b1e5f085dd2231d627b26191c9198558c6a67bafe9f77bf05ca7030e01de 13740 ball_1.5.0+git20180813.37fc53c-6build1.debian.tar.xz Files: 1a3777fbe23ce81cc89c2fa53de4af9c 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz 4abb4f85793e48127b5b1850d69ba9a7 13740 ball_1.5.0+git20180813.37fc53c-6build1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEkpeKbhleSSGCX3/w808JdE6fXdkFAl6tFGsACgkQ808JdE6f XdnMVQ/6Aton7W/6TtcLhyJYlJ1zruaGOOZC7BAiZWZSnBdxsmSOlcALD+0Z6eQe VoYOFEZJYLKf8UXmX2VVOcU9KXjSiZ9o/w4kStJG7ycGHR8qIj/AA08T/6b9zUZ+ hTkAoBpl6S7BZOT0GZ/cOCXBDrMV9R7D6L71pSXRw2gg4u37VK36ahA8IVwbkLY7 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info: using patch list from debian/patches/series dpkg-source: info: applying python3.patch dpkg-source: info: applying fix-ftbfs-char.patch dpkg-source: info: applying missing_GLEW Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19247879 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19247879 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19247879 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package ball dpkg-buildpackage: info: source version 1.5.0+git20180813.37fc53c-6build1 dpkg-buildpackage: info: source distribution groovy dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 fakeroot debian/rules clean dh clean --buildsystem=cmake --builddirectory=build --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' [ -d source ] && cd source ; \ if [ -f Makefile ] ; \ then \ make clean ; \ cd PYTHON/EXTENSIONS; \ make clean; \ rm -rf ../lib/Linux*; \ rm -rf ../doc/doxygen/latex/*; \ rm -f /<>/source/config.status 2>/dev/null; \ fi rm -f data/BALLView/translations/BALLView.de_DE.qm rm -f data/BALLView/translations/BALLView.zh_TW.qm rm -f doc/TUTORIAL/*.aux rm -rf build find . -name "*.o" | xargs -r rm find . -type l | xargs -r rm find doc/TUTORIAL/ -name "tutorial.*" | egrep -v ".(tex|bib)$" |xargs -r rm rm -f include/BALL/BALL.doc # find . -name "*.doc" -delete # Remove self-create UI header file rm -f include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h \ include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h \ include/BALL/VIEW/UIC/ui_atomOverview.h make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=build dh_clean -O--buildsystem=cmake -O--builddirectory=build rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libball1.5-data.substvars debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/python3-ball.substvars debian/ballview.substvars debian/libball1.5-doc.substvars debian/files rm -fr -- debian/libball1.5-data/ debian/tmp/ debian/libball1.5/ debian/libball1.5-dev/ debian/libballview1.5/ debian/libballview1.5-dev/ debian/python3-ball/ debian/ballview/ debian/libball1.5-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --buildsystem=cmake --builddirectory=build --with python3 dh_update_autotools_config -a -O--buildsystem=cmake -O--builddirectory=build dh_autoreconf -a -O--buildsystem=cmake -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' mkdir -p build cd build && LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now" CXXFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" CFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" \ cmake .. -DCMAKE_SOURCE_DIR=/<> -DCMAKE_INSTALL_PREFIX=./usr \ -DBALL_PATH=/usr -DBALL_DATA_PATH=/usr/share/BALL-1.5/data \ -DCMAKE_VERBOSE_MAKEFILE=ON CMake Deprecation Warning at CMakeLists.txt:10 (CMAKE_POLICY): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- The C compiler identification is GNU 9.3.0 -- The CXX compiler identification is GNU 9.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiler checks for conversion: OFF -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of size_t -- Check size of size_t - done -- Check size of void* -- Check size of void* - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include dirent.h -- Looking for C++ include dirent.h - found -- Looking for C++ include direct.h -- Looking for C++ include direct.h - not found -- Looking for C++ include pwd.h -- Looking for C++ include pwd.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/stat.h -- Looking for C++ include sys/stat.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/param.h -- Looking for C++ include sys/param.h - found -- Looking for C++ include sys/sysinfo.h -- Looking for C++ include sys/sysinfo.h - found -- Performing Test BALL_HAS_MODE_T -- Performing Test BALL_HAS_MODE_T - Success -- Looking for C++ include ieeefp.h -- Looking for C++ include ieeefp.h - not found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS -- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS - Failed -- Performing Test BALL_HAS_THREAD_LOCAL -- Performing Test BALL_HAS_THREAD_LOCAL - Success -- Performing Test BALL_HAS_NOEXCEPT -- Performing Test BALL_HAS_NOEXCEPT - Success -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS - Success -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT - Success -- Looking for vsnprintf -- Looking for vsnprintf - found -- [GCC only] STL debug mode: OFF -- Found BISON: /usr/bin/bison -- Found FLEX: /usr/bin/flex -- Checking for yylex_destroy support in flex -- Checking for yylex_destroy support in flex - Not found -- Looking for C++ include rpc/types.h -- Looking for C++ include rpc/types.h - found -- Performing Test XDR_HAS_RPC_XDR_H -- Performing Test XDR_HAS_RPC_XDR_H - Success -- Looking for xdr_int -- Looking for xdr_int - found -- Looking for xdr_u_hyper -- Looking for xdr_u_hyper - found -- Looking for 64-bit XDR type (for xdr_u_hyper) -- Performing Test XDR_64Bit_Type -- Performing Test XDR_64Bit_Type - Success -- Performing Test BALL_XDRREC_CREATE_CHAR_CHAR_INT -- Performing Test BALL_XDRREC_CREATE_CHAR_CHAR_INT - Success -- Found Boost: /usr/lib/riscv64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake (found suitable version "1.71.0", minimum required is "1.55") found components: chrono date_time iostreams regex serialization system thread -- Could NOT find LPSolve (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_PATH LPSOLVE_LINKS) -- Looking for math.h -- Looking for math.h - found -- Could NOT find LibSVM (missing: LIBSVM_LIBRARY LIBSVM_INCLUDE_DIR LIBSVM_INCLUDE_DIRS LIBSVM_ROOT_DIR) -- [Warning] FindTBB.cmake: The use of TBB_ARCHITECTURE and TBB_COMPILER is deprecated and may not be supported in future versions. Please set (using tbbvars.[bat|csh|sh]). -- Looked for Threading Building Blocks in /opt/intel/tbb;/usr/local/include;/usr/include;/usr -- Intel Threading Building Blocks not found! -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) -- QtWebEngine has not been found. Disabling WebEngine support. -- QtWebEngineWidgets has not been found. Disabling WebEngine support. -- QtWebChannel has not been found. Disabling WebEngine support. -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Found OpenGL: /usr/lib/riscv64-linux-gnu/libGL.so -- Found GLEW: /usr/include (found version "2.1.0") -- Could not find RTfact header file (RTpie/IRayTracer.hpp)! Real time ray tracing will be disabled! -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.8.2", minimum required is "3") -- Found PythonLibs: /usr/lib/riscv64-linux-gnu/libpython3.8.so (found suitable version "3.8.2", minimum required is "3") -- Found SIP version: 4.19.22 -- Could NOT find SIP (missing: SIP_LIBRARIES) (Required is at least version "4.8") -- Disabling python support. -- Setting CTDSchema version to its default value (v1.7) -- Setting CTDConverter version to its default value (v2.0) -- QtWebEngine support has not been enabled. Disabling the PresentaBALL plugin. -- Could not find SpaceNavigator libraries. Disabling the SpaceNavigator plugin -- Could not find VRPN libraries. Disabling the VRPN plugin -- Could not find VRPN libraries. Disabling the VRPNHD plugin -- QtWebEngine support has not been enabled. Disabling the BALLaxy plugin -- QtWebEngine support has not been enabled. Disabling the Jupyter plugin. -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Could NOT find LATEX (missing: LATEX_COMPILER) -- Doxygen not found. Disabling all documentation targets! -- Doxygen or Latex missing. Disabling 'tutorial' target! -- -- ----------------------------------------------------------------- -- -- You have successfully configured BALL. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done -- Generating done -- Build files have been written to: /<>/build make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' ## Fix upstream issue of missing UI files ## ... ## Uhmmm, seems we need to do this for all UI files mentioned in ## source/VIEW/DIALOGS/sources.cmake ## but I really hope some cmake expert might be able to find a clue ## how to trigger cmake to do it as intended by upstream. ## Somehow the code ## ADD_BALL_UIFILES("VIEW/DIALOGS" "") ## needs to be called before the build code below can be started make -C build BALL VIEW BALLView build_tests install make[2]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 BALL make[3]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 21 make -f CMakeFiles/Makefile2 CMakeFiles/BALL.dir/all make[4]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BALL_autogen make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[5]: Entering directory '/<>/build' [ 0%] [BISON][smilesParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/STRUCTURE/smilesParserParser.h -pSmilesParser -d -o /<>/build/source/STRUCTURE/smilesParserParser.C source/STRUCTURE/smilesParserParser.y [ 0%] [FLEX][CIFParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PCIFParser -o/<>/build/source/FORMAT/CIFParserLexer.C source/FORMAT/CIFParserLexer.l [ 0%] [BISON][CIFParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/FORMAT/CIFParserParser.h -pCIFParser -d -o /<>/build/source/FORMAT/CIFParserParser.C source/FORMAT/CIFParserParser.y source/FORMAT/CIFParserParser.y: warning: 5 shift/reduce conflicts [-Wconflicts-sr] [ 4%] [FLEX][GAMESSDatParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PGAMESSDatParser -o/<>/build/source/FORMAT/GAMESSDatParserLexer.C source/FORMAT/GAMESSDatParserLexer.l [ 4%] [BISON][GAMESSDatParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/FORMAT/GAMESSDatParserParser.h -pGAMESSDatParser -d -o /<>/build/source/FORMAT/GAMESSDatParserParser.C source/FORMAT/GAMESSDatParserParser.y source/FORMAT/GAMESSDatParserParser.y: warning: 3 shift/reduce conflicts [-Wconflicts-sr] [ 4%] [FLEX][expressionParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PExpressionParser -o/<>/build/source/KERNEL/expressionParserLexer.C source/KERNEL/expressionParserLexer.l [ 4%] [BISON][expressionParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/KERNEL/expressionParserParser.h -pExpressionParser -d -o /<>/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y [ 4%] [FLEX][parsedFunctionLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PParsedFunction -o/<>/build/source/MATHS/parsedFunctionLexer.C source/MATHS/parsedFunctionLexer.l [ 4%] [BISON][parsedFunctionParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/MATHS/parsedFunctionParser.h -pParsedFunction -d -o /<>/build/source/MATHS/parsedFunctionParser.C source/MATHS/parsedFunctionParser.y [ 4%] [FLEX][GAFFCESParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PGAFFCESParser -o/<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C source/MOLMEC/AMBER/GAFFCESParserLexer.l [ 4%] [BISON][GAFFCESParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.h -pGAFFCESParser -d -o /<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.C source/MOLMEC/AMBER/GAFFCESParserParser.y [ 4%] [FLEX][smartsParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PSmartsParser -o/<>/build/source/STRUCTURE/smartsParserLexer.C source/STRUCTURE/smartsParserLexer.l [ 4%] [BISON][smartsParserParser] Building parser with bison 3.5.3 cd /<> && /usr/bin/bison --defines=/<>/build/source/STRUCTURE/smartsParserParser.h -pSmartsParser -d -o /<>/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y source/STRUCTURE/smartsParserParser.y: warning: 26 shift/reduce conflicts [-Wconflicts-sr] [ 4%] [FLEX][smilesParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PSmilesParser -o/<>/build/source/STRUCTURE/smilesParserLexer.C source/STRUCTURE/smilesParserLexer.l [ 4%] Automatic MOC for target BALL /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 4%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake --color= Scanning dependencies of target BALL make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[5]: Entering directory '/<>/build' [ 4%] Building CXX object CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o -c /<>/build/BALL_autogen/mocs_compilation.cpp [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x 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-Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/client.C.o -c /<>/source/CONCEPT/client.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o -c /<>/source/CONCEPT/composite.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/embeddable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/embeddable.C.o -c /<>/source/CONCEPT/embeddable.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o -c /<>/source/CONCEPT/enumerator.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o -c /<>/source/CONCEPT/factory.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/object.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/object.C.o -c /<>/source/CONCEPT/object.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o -c /<>/source/CONCEPT/objectCreator.C [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -c /<>/source/CONCEPT/moleculeObjectCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/CONCEPT/moleculeObjectCreator.C:10: /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/CONCEPT/moleculeObjectCreator.C:10: /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/CONCEPT/moleculeObjectCreator.C:10: /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:108:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 108 | BALL_FOREACH_BOND(*s, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/CONCEPT/moleculeObjectCreator.C:10: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:108:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 108 | BALL_FOREACH_BOND(*s, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -c /<>/source/CONCEPT/persistenceManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/persistenceManager.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/source/CONCEPT/persistenceManager.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/persistenceManager.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/source/CONCEPT/persistenceManager.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/persistenceManager.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/source/CONCEPT/persistenceManager.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -c /<>/source/CONCEPT/preferencesObject.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -c /<>/source/CONCEPT/processor.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -c /<>/source/CONCEPT/property.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -c /<>/source/CONCEPT/selectable.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -c /<>/source/CONCEPT/textPersistenceManager.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -c /<>/source/CONCEPT/timeStamp.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -c /<>/source/CONCEPT/visitor.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -c /<>/source/CONCEPT/molecularInformation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/molecularInformation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/source/CONCEPT/molecularInformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/molecularInformation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/source/CONCEPT/molecularInformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/molecularInformation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/source/CONCEPT/molecularInformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/XDRPersistenceManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/CONCEPT/XDRPersistenceManager.C.o -c /<>/source/CONCEPT/XDRPersistenceManager.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/constants.C.o -c /<>/source/COMMON/constants.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/exception.C.o -c /<>/source/COMMON/exception.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/hash.C.o -c /<>/source/COMMON/hash.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/init.C.o -c /<>/source/COMMON/init.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -c /<>/source/COMMON/logStream.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -c /<>/source/COMMON/rtti.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/COMMON/version.C.o -c /<>/source/COMMON/version.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -c /<>/source/DATATYPE/GRAPH/graphAlgorithms.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -c /<>/source/DATATYPE/GRAPH/molecularGraph.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o -c /<>/source/DATATYPE/GRAPH/treeWidth.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o -c /<>/source/DATATYPE/bitVector.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o -c /<>/source/DATATYPE/contourSurface.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o -c /<>/source/DATATYPE/hashGrid.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/options.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/options.C.o -c /<>/source/DATATYPE/options.C [ 9%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o -c /<>/source/DATATYPE/regularExpression.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o -c /<>/source/DATATYPE/regularData1D.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -c /<>/source/DATATYPE/regularData2D.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o -c /<>/source/DATATYPE/regularData3D.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/string.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -c /<>/source/DATATYPE/string.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -c /<>/source/ENERGY/atomicContactEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/hashGrid.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/hashGrid.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/hashGrid.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/source/ENERGY/atomicContactEnergy.C:10: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/ENERGY/atomicContactEnergy.C:250:37: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/atomicContactEnergy.C:12: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::ACEFastAtomType*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -c /<>/source/ENERGY/composedEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -c /<>/source/ENERGY/coulomb.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/coulomb.C:7: /<>/source/ENERGY/coulomb.C: In function ‘double BALL::calculateCoulomb(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/coulomb.C:23:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 23 | BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/coulomb.C:7: /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/coulomb.C:23:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 23 | BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -c /<>/source/ENERGY/distanceCoulomb.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/distanceCoulomb.C:8: /<>/source/ENERGY/distanceCoulomb.C: In function ‘double BALL::calculateDistanceCoulomb(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/distanceCoulomb.C:30:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 30 | BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/distanceCoulomb.C:8: /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/distanceCoulomb.C:30:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 30 | BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -c /<>/source/ENERGY/energyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -c /<>/source/FORMAT/amiraMeshFile.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -c /<>/source/FORMAT/antechamberFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/antechamberFile.C:8: /<>/source/FORMAT/antechamberFile.C: In member function ‘virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/antechamberFile.C:8: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/antechamberFile.C:8: /<>/source/FORMAT/antechamberFile.C: In member function ‘virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -c /<>/source/FORMAT/bruker1DFile.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -c /<>/source/FORMAT/bruker2DFile.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -c /<>/source/FORMAT/commandlineParser.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -c /<>/source/FORMAT/dockResultFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/source/FORMAT/dockResultFile.C:806:4: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 806 | BALL_FOREACH_RESIDUE(*prot,ri) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/source/FORMAT/dockResultFile.C:806:4: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 806 | BALL_FOREACH_RESIDUE(*prot,ri) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:820:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 820 | BALL_FOREACH_ATOM(*res, pai) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:820:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 820 | BALL_FOREACH_ATOM(*res, pai) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:982:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 982 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C:990:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 990 | a_it = molecule->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:991:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 991 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C:1007:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1007 | a_it = molecule->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1008:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1008 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -c /<>/source/FORMAT/CCP4File.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -c /<>/source/FORMAT/CIFFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/FORMAT/CIFFile.h: In member function ‘BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)’: /<>/include/BALL/FORMAT/CIFFile.h:76:10: warning: implicitly-declared ‘BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)’ is deprecated [-Wdeprecated-copy] 76 | class SaveFrame | ^~~~~~~~~ /<>/source/FORMAT/CIFFile.C:134:2: note: because ‘BALL::CIFFile::Item’ has user-provided ‘BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)’ 134 | CIFFile::Item::Item(const Item& item) | ^~~~~~~ /<>/source/FORMAT/CIFFile.C: In constructor ‘BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::SaveFrame)’: /<>/source/FORMAT/CIFFile.C:379:15: note: synthesized method ‘BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)’ first required here 379 | saveframe = new_saveframe; | ^~~~~~~~~~~~~ /<>/source/FORMAT/CIFFile.C: In constructor ‘BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::Item)’: /<>/source/FORMAT/CIFFile.C:385:14: warning: implicitly-declared ‘BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)’ is deprecated [-Wdeprecated-copy] 385 | dataitem = new_item; | ^~~~~~~~ /<>/source/FORMAT/CIFFile.C:134:2: note: because ‘BALL::CIFFile::Item’ has user-provided ‘BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)’ 134 | CIFFile::Item::Item(const Item& item) | ^~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -c /<>/source/FORMAT/DCDFile.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -c /<>/source/FORMAT/DSN6File.C [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -c /<>/source/FORMAT/GAMESSDatFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/GAMESSDatFile.C: In member function ‘virtual bool BALL::GAMESSDatFile::write(const BALL::System&)’: /<>/source/FORMAT/GAMESSDatFile.C:88:32: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 88 | for (atIt = system.beginAtom(); +atIt; ++atIt) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -c /<>/source/FORMAT/genericMolFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -c /<>/source/FORMAT/HINFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/FORMAT/HINFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/FORMAT/HINFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/FORMAT/HINFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/HINFile.C: In member function ‘virtual bool BALL::HINFile::write(const BALL::System&)’: /<>/source/FORMAT/HINFile.C:153:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 153 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/HINFile.C:377:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 377 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -c /<>/source/FORMAT/HMOFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -c /<>/source/FORMAT/INIFile.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -c /<>/source/FORMAT/JCAMPFile.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -c /<>/source/FORMAT/KCFFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/KCFFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/source/FORMAT/KCFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/KCFFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/source/FORMAT/KCFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/KCFFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/source/FORMAT/KCFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/KCFFile.C: In member function ‘virtual bool BALL::KCFFile::write(const BALL::Molecule&)’: /<>/source/FORMAT/KCFFile.C:91:32: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 91 | for (ai = molecule.beginAtom(); +ai; ++ai) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/source/FORMAT/KCFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -c /<>/source/FORMAT/lineBasedFile.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -c /<>/source/FORMAT/MOLFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/MOLFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/MOLFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/MOLFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOLFile.C:11: /<>/source/FORMAT/MOLFile.C: In member function ‘virtual bool BALL::MOLFile::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOLFile.C:11: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/FORMAT/MOLFile.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOLFile.C:11: /<>/source/FORMAT/MOLFile.C: In member function ‘virtual bool BALL::MOLFile::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -c /<>/source/FORMAT/molFileFactory.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -c /<>/source/FORMAT/MOPACInputFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -c /<>/source/FORMAT/MOPACOutputFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -c /<>/source/FORMAT/SDFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/SDFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/source/FORMAT/SDFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/SDFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/source/FORMAT/SDFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/SDFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/source/FORMAT/SDFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -c /<>/source/FORMAT/MOL2File.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/source/FORMAT/MOL2File.C: In member function ‘virtual bool BALL::MOL2File::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/source/FORMAT/MOL2File.C: In member function ‘virtual bool BALL::MOL2File::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOL2File.C:162:36: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 162 | atom_it = new_molecule.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOL2File.C:212:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 212 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:212:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 212 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOL2File.C: In member function ‘bool BALL::MOL2File::containsAtomChilds_(BALL::AtomContainerConstIterator&)’: /<>/source/FORMAT/MOL2File.C:993:51: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 993 | for (children_it = frag_it->beginChildComposite(); +children_it; ++children_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -c /<>/source/FORMAT/NMRStarFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/NMRStarFile.C: In member function ‘bool BALL::NMRStarFile::assignShifts_(BALL::NMRStarFile::BALLToBMRBMapper&)’: /<>/source/FORMAT/NMRStarFile.C:1204:77: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1204 | r_it = const_cast(ball_to_bmrb_mapping.getChain())->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/NMRStarFile.C: In member function ‘bool BALL::NMRStarFile::assignShifts_(BALL::NMRStarFile::BALLToBMRBMapper&)’: /<>/source/FORMAT/NMRStarFile.C:1204:77: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 1204 | r_it = const_cast(ball_to_bmrb_mapping.getChain())->beginResidue(); | ^ /<>/source/FORMAT/NMRStarFile.C: In member function ‘int BALL::NMRStarFile::valueToInt_(BALL::String)’: /<>/source/FORMAT/NMRStarFile.C:2277:24: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 2277 | } catch (Exception::InvalidFormat) { | ^~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -c /<>/source/FORMAT/paramFile.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -c /<>/source/FORMAT/parameters.C /<>/source/FORMAT/parameters.C: In copy constructor ‘BALL::Parameters::Parameters(const BALL::Parameters&)’: /<>/source/FORMAT/parameters.C:19:34: warning: implicitly-declared ‘BALL::INIFile::INIFile(const BALL::INIFile&)’ is deprecated [-Wdeprecated-copy] 19 | INI_file_(parameters.INI_file_) | ^ In file included from /<>/include/BALL/FORMAT/parameters.h:12, from /<>/source/FORMAT/parameters.C:7: /<>/include/BALL/FORMAT/INIFile.h:378:18: note: because ‘BALL::INIFile’ has user-provided ‘const BALL::INIFile& BALL::INIFile::operator=(const BALL::INIFile&)’ 378 | const INIFile& operator = (const INIFile& file) | ^~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -c /<>/source/FORMAT/parameterSection.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -c /<>/source/FORMAT/PDBdefs.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -c /<>/source/FORMAT/PDBFileGeneral.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from /usr/include/c++/9/cstring:42, from /<>/include/BALL/COMMON/debug.h:19, from /<>/include/BALL/common.h:16, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileGeneral.C:10: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘bool BALL::PDBFile::parseLine(const char*, BALL::Size, const char*, ...)’ at /<>/source/FORMAT/PDBFileGeneral.C:381:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -c /<>/source/FORMAT/PDBFileDetails.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessSheetsTurns_(BALL::PDBFile::QuadrupleList&, BALL::PDBFile::SecStructList&)’: /<>/source/FORMAT/PDBFileDetails.C:195:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 195 | for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessSheetsTurns_(BALL::PDBFile::QuadrupleList&, BALL::PDBFile::SecStructList&)’: /<>/source/FORMAT/PDBFileDetails.C:195:58: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 195 | for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it) | ^ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessRandomCoils_()’: /<>/source/FORMAT/PDBFileDetails.C:287:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 287 | for (protein_res_it = chain_it->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from /usr/include/c++/9/cstring:42, from /<>/include/BALL/COMMON/debug.h:19, from /<>/include/BALL/common.h:16, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/FORMAT/PDBFileDetails.C:9: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘static void BALL::PDBFile::updateAdditionalAtomInfo_(const BALL::PDB::Structure::AtomEntry&, BALL::PDB::AdditionalAtomInfo&)’ at /<>/source/FORMAT/PDBFileDetails.C:1460:12: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ specified bound 4 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘void BALL::PDBFile::writeCoordinateSection_(const BALL::PDB::Structure&, const BALL::PDBInfo&)’ at /<>/source/FORMAT/PDBFileDetails.C:1553:12: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ specified bound 4 equals destination size [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘void BALL::PDBFile::writeSEQRESSection_(const std::vector >&)’ at /<>/source/FORMAT/PDBFileDetails.C:1785:11: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 3 bytes from a string of length 3 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -c /<>/source/FORMAT/PDBInfo.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -c /<>/source/FORMAT/PDBRecords.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -c /<>/source/FORMAT/pubchemDownloader.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -c /<>/source/FORMAT/resourceFile.C [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -c /<>/source/FORMAT/SCWRLRotamerFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 19%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -c /<>/source/FORMAT/trajectoryFile.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -c /<>/source/FORMAT/trajectoryFileFactory.C /<>/source/FORMAT/trajectoryFileFactory.C: In static member function ‘static BALL::TrajectoryFile* BALL::TrajectoryFileFactory::detectFormat(const BALL::String&)’: /<>/source/FORMAT/trajectoryFileFactory.C:103:68: warning: unused parameter ‘name’ [-Wunused-parameter] 103 | TrajectoryFile* TrajectoryFileFactory::detectFormat(const String& name) | ~~~~~~~~~~~~~~^~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -c /<>/source/FORMAT/TRRFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/TRRFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/TRRFile.h:9, from /<>/source/FORMAT/TRRFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/TRRFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/TRRFile.h:9, from /<>/source/FORMAT/TRRFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/TRRFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/TRRFile.h:9, from /<>/source/FORMAT/TRRFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -c /<>/source/FORMAT/XYZFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -c /<>/build/source/FORMAT/CIFParserParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C: In function ‘int CIFParserparse()’: /<>/build/source/FORMAT/CIFParserParser.C:1890:20: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 1890 | yyerror (YY_("syntax error")); | ^~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C:313:22: note: in definition of macro ‘YY_’ 313 | # define YY_(Msgid) Msgid | ^~~~~ /<>/build/source/FORMAT/CIFParserParser.C:2034:16: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 2034 | yyerror (YY_("memory exhausted")); | ^~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C:313:22: note: in definition of macro ‘YY_’ 313 | # define YY_(Msgid) Msgid | ^~~~~ source/FORMAT/CIFParserParser.y:239:33: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:236:33: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:233:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:230:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:227:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:219:89: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:218:71: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:217:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:214:95: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:213:95: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:209:111: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:205:159: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:204:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:203:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 7648 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:198:139: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:197:139: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:196:159: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:195:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y:194:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9, from source/FORMAT/CIFParserParser.y:2: /usr/include/riscv64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 7648 bytes into a destination of size 2550 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -c /<>/build/source/FORMAT/CIFParserLexer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserLexer.C: At global scope: /<>/build/source/FORMAT/CIFParserLexer.C:2176:17: warning: ‘void yyunput(int, char*)’ defined but not used [-Wunused-function] 2176 | static void yyunput (int c, char * yy_bp ) | ^~~~~~~ In file included from /usr/include/string.h:495, from /<>/build/source/FORMAT/CIFParserLexer.C:280: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:223:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:207:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:200:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:135:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:117:10: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘int CIFParserlex()’ at source/FORMAT/CIFParserLexer.l:90:15: /usr/include/riscv64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -c /<>/build/source/FORMAT/GAMESSDatParserParser.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -c /<>/build/source/FORMAT/GAMESSDatParserLexer.C /<>/build/source/FORMAT/GAMESSDatParserLexer.C:2637:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 2637 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atom.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -c /<>/source/KERNEL/atom.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/atom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/KERNEL/atom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/atom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/KERNEL/atom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/atom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/KERNEL/atom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -c /<>/source/KERNEL/atomContainer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countBonds() const’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countBonds() const’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countInterBonds() const’: /<>/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:244:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 244 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:244:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 244 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countIntraBonds() const’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:258:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 258 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:258:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 258 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:124:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:126:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:3: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyIntraBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:484:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 484 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:484:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 484 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:7: /<>/include/BALL/KERNEL/global.h: In instantiation of ‘void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = BALL::AtomContainer]’: /<>/source/KERNEL/atomContainer.C:91:42: required from here /<>/include/BALL/KERNEL/global.h:79:19: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 79 | for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/bond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -c /<>/source/KERNEL/bond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/chain.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -c /<>/source/KERNEL/chain.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expression.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -c /<>/source/KERNEL/expression.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/expression.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/expression.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/expression.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/expression.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/expression.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/expression.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -c /<>/source/KERNEL/expressionPredicate.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -c /<>/source/KERNEL/expressionTree.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -c /<>/source/KERNEL/expressionParser.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -c /<>/source/KERNEL/extractors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/extractors.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/extractors.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/extractors.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/extractors.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/extractors.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/extractors.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -c /<>/source/KERNEL/fragment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/global.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/global.C.o -c /<>/source/KERNEL/global.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -c /<>/source/KERNEL/molecularInteractions.C [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -c /<>/source/KERNEL/molecule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -c /<>/source/KERNEL/nucleicAcid.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -c /<>/source/KERNEL/nucleotide.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -c /<>/source/KERNEL/PDBAtom.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/PDBAtom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/KERNEL/PDBAtom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/PDBAtom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/KERNEL/PDBAtom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/PDBAtom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/KERNEL/PDBAtom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -c /<>/source/KERNEL/predicate.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/protein.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -c /<>/source/KERNEL/protein.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -c /<>/source/KERNEL/PTE.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/residue.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -c /<>/source/KERNEL/residue.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionPsi() const’: /<>/source/KERNEL/residue.C:135:25: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 135 | for (it = beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:143:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 143 | for (it = next->beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionPhi() const’: /<>/source/KERNEL/residue.C:199:25: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 199 | for (it = beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:207:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 207 | for (it = previous->beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionOmega() const’: /<>/source/KERNEL/residue.C:262:25: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 262 | for (it = beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:270:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 270 | for (it = next->beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -c /<>/source/KERNEL/secondaryStructure.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/selector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -c /<>/source/KERNEL/selector.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -c /<>/source/KERNEL/standardPredicates.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/system.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/system.C.o -c /<>/source/KERNEL/system.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o -c /<>/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y:11:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] source/KERNEL/expressionParserParser.y:126:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] [ 28%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o -c /<>/build/source/KERNEL/expressionParserLexer.C /<>/build/source/KERNEL/expressionParserLexer.C:1845:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1845 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o -c /<>/source/MATHS/analyticalGeometry.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/angle.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/angle.C.o -c /<>/source/MATHS/angle.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/box3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/box3.C.o -c /<>/source/MATHS/box3.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/circle3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/circle3.C.o -c /<>/source/MATHS/circle3.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/cubicSpline1D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/cubicSpline1D.C.o -c /<>/source/MATHS/cubicSpline1D.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/cubicSpline2D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/cubicSpline2D.C.o -c /<>/source/MATHS/cubicSpline2D.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/function.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/function.C.o -c /<>/source/MATHS/function.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/line3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/line3.C.o -c /<>/source/MATHS/line3.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/matrix44.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/matrix44.C.o -c /<>/source/MATHS/matrix44.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/parsedFunction.C.o -c /<>/source/MATHS/parsedFunction.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/plane3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/plane3.C.o -c /<>/source/MATHS/plane3.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/piecewiseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/piecewiseFunction.C.o -c /<>/source/MATHS/piecewiseFunction.C [ 28%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/piecewisePolynomial.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/piecewisePolynomial.C.o -c /<>/source/MATHS/piecewisePolynomial.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/quaternion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/quaternion.C.o -c /<>/source/MATHS/quaternion.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/simpleBox3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/simpleBox3.C.o -c /<>/source/MATHS/simpleBox3.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/sphere3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/sphere3.C.o -c /<>/source/MATHS/sphere3.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/surface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/surface.C.o -c /<>/source/MATHS/surface.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector2.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/vector2.C.o -c /<>/source/MATHS/vector2.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/vector3.C.o -c /<>/source/MATHS/vector3.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector4.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/vector4.C.o -c /<>/source/MATHS/vector4.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o -c /<>/build/source/MATHS/parsedFunctionParser.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o -c /<>/build/source/MATHS/parsedFunctionLexer.C /<>/build/source/MATHS/parsedFunctionLexer.C:1869:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1869 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -c /<>/source/MOLMEC/AMBER/amber.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amber.C:11: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -c /<>/source/MOLMEC/AMBER/amberBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberBend.C: In member function ‘virtual bool BALL::AmberBend::setup()’: /<>/source/MOLMEC/AMBER/amberBend.C:84:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 84 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberBend.C: In member function ‘virtual bool BALL::AmberBend::setup()’: /<>/source/MOLMEC/AMBER/amberBend.C:84:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 84 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/AMBER/amberBend.C:87:16: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 87 | for (it1 = it2, ++it1; +it1 ; ++it1) | ^~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -c /<>/source/MOLMEC/AMBER/amberNonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberNonBonded.C: In member function ‘const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)’: /<>/source/MOLMEC/AMBER/amberNonBonded.C:127:33: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 127 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberNonBonded.C: In member function ‘const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)’: /<>/source/MOLMEC/AMBER/amberNonBonded.C:127:33: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 127 | ForceFieldComponent::operator = (anb); | ^ /<>/source/MOLMEC/AMBER/amberNonBonded.C:127:39: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 127 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -c /<>/source/MOLMEC/AMBER/amberStretch.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -c /<>/source/MOLMEC/AMBER/amberTorsion.C In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:19, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:19, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:19, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C: In member function ‘virtual bool BALL::AmberTorsion::setup()’: /<>/source/MOLMEC/AMBER/amberTorsion.C:115:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 115 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C: In member function ‘virtual bool BALL::AmberTorsion::setup()’: /<>/source/MOLMEC/AMBER/amberTorsion.C:115:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 115 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/AMBER/amberTorsion.C:124:39: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 124 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:139:70: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 139 | for (it3 = const_cast(it1->getSecondAtom())->beginBond(); +it3 ; ++it3) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:186:41: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 186 | tmp.values = values.values[j]; | ^ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:296:39: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 296 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:301:18: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 301 | for (it2 = it1, ++it2; +it2 ; it2++) | ^~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:305:19: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 305 | for (it3 = it2, ++it3; +it3 ; it3++) | ^~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:362:40: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 362 | tmp.values = values.values[j]; | ^ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -c /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6: /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6: /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6: /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -c /<>/source/MOLMEC/AMBER/GAFFCESParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFCESParser.C: In member function ‘bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)’: /<>/source/MOLMEC/AMBER/GAFFCESParser.C:89:34: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 89 | for (bond_it = atom->beginBond(); +bond_it; ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFCESParser.C: In member function ‘bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)’: /<>/source/MOLMEC/AMBER/GAFFCESParser.C:89:34: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 89 | for (bond_it = atom->beginBond(); +bond_it; ++bond_it) | ^ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -c /<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.C [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -c /<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C /<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1996:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1996 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -c /<>/source/MOLMEC/CHARMM/charmm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:10: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -c /<>/source/MOLMEC/CHARMM/charmmBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmBend.C: In member function ‘virtual bool BALL::CharmmBend::setup()’: /<>/source/MOLMEC/CHARMM/charmmBend.C:83:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 83 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmBend.C: In member function ‘virtual bool BALL::CharmmBend::setup()’: /<>/source/MOLMEC/CHARMM/charmmBend.C:83:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 83 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/CHARMM/charmmBend.C:86:16: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 86 | for (it1 = it2, ++it1; +it1 ; ++it1 ) | ^~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -c /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function ‘virtual bool BALL::CharmmImproperTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:40: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 173 | for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function ‘virtual bool BALL::CharmmImproperTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:40: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 173 | for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:202:45: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 202 | for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:229:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 229 | for (atom_it = res_it->beginAtom(); (cys_res != 0) && +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:258:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -c /<>/source/MOLMEC/CHARMM/charmmNonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function ‘const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)’: /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:137:33: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 137 | ForceFieldComponent::operator = (charmm_non_bonded); | ^ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function ‘const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)’: /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:137:33: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 137 | ForceFieldComponent::operator = (charmm_non_bonded); | ^ /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:137:53: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 137 | ForceFieldComponent::operator = (charmm_non_bonded); | ^ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -c /<>/source/MOLMEC/CHARMM/charmmStretch.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmStretch.C: In member function ‘virtual bool BALL::CharmmStretch::setup()’: /<>/source/MOLMEC/CHARMM/charmmStretch.C:71:47: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 71 | for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmStretch.C: In member function ‘virtual bool BALL::CharmmStretch::setup()’: /<>/source/MOLMEC/CHARMM/charmmStretch.C:71:47: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 71 | for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator) | ^ [ 33%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -c /<>/source/MOLMEC/CHARMM/charmmTorsion.C In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:131:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 131 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:131:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 131 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:140:39: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 140 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:155:70: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 155 | for (it3 = const_cast(it1->getSecondAtom())->beginBond(); +it3 ; ++it3) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:198:48: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 198 | for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:198:48: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 198 | for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it) | ^ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:304:41: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 304 | tmp.values = values.values[j]; | ^ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -c /<>/source/MOLMEC/COMMON/assignTypes.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/MOLMEC/COMMON/assignTypes.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9, from /<>/include/BALL/MOLMEC/COMMON/assignTypes.h:17, from /<>/source/MOLMEC/COMMON/assignTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/MOLMEC/COMMON/assignTypes.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9, from /<>/include/BALL/MOLMEC/COMMON/assignTypes.h:17, from /<>/source/MOLMEC/COMMON/assignTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/MOLMEC/COMMON/assignTypes.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9, from /<>/include/BALL/MOLMEC/COMMON/assignTypes.h:17, from /<>/source/MOLMEC/COMMON/assignTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -c /<>/source/MOLMEC/COMMON/atomVector.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -c /<>/source/MOLMEC/COMMON/bendComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/chargeRuleProcessor.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -c /<>/source/MOLMEC/COMMON/forceField.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/forceField.C: In member function ‘void BALL::ForceField::collectAtoms_(const BALL::System&)’: /<>/source/MOLMEC/COMMON/forceField.C:326:36: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 326 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -c /<>/source/MOLMEC/COMMON/forceFieldComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/forceFieldComponent.C: In copy constructor ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’: /<>/source/MOLMEC/COMMON/forceFieldComponent.C:34:2: warning: base class ‘class BALL::ScoringComponent’ should be explicitly initialized in the copy constructor [-Wextra] 34 | ForceFieldComponent::ForceFieldComponent(const ForceFieldComponent& force_field_component) | ^~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -c /<>/source/MOLMEC/COMMON/gradient.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -c /<>/source/MOLMEC/COMMON/periodicBoundary.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/radiusRuleProcessor.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -c /<>/source/MOLMEC/COMMON/ruleEvaluator.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -c /<>/source/MOLMEC/COMMON/ruleProcessor.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -c /<>/source/MOLMEC/COMMON/snapShot.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/MOLMEC/COMMON/snapShot.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/source/MOLMEC/COMMON/snapShot.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/MOLMEC/COMMON/snapShot.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/source/MOLMEC/COMMON/snapShot.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/MOLMEC/COMMON/snapShot.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/source/MOLMEC/COMMON/snapShot.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -c /<>/source/MOLMEC/COMMON/snapShotManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/snapShotManager.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/source/MOLMEC/COMMON/snapShotManager.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/snapShotManager.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/source/MOLMEC/COMMON/snapShotManager.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/snapShotManager.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/source/MOLMEC/COMMON/snapShotManager.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -c /<>/source/MOLMEC/COMMON/support.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘BALL::Size BALL::MolmecSupport::addNonOverlappingMolecules(BALL::System&, const BALL::HashGrid3&, const BALL::System&, const SimpleBox3&, double)’: /<>/source/MOLMEC/COMMON/support.C:496:38: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 496 | for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const SimpleBox3&)’: /<>/source/MOLMEC/COMMON/support.C:652:33: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 652 | atom_it = mol_it->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const SimpleBox3&)’: /<>/source/MOLMEC/COMMON/support.C:652:33: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 652 | atom_it = mol_it->beginAtom(); | ^ /<>/source/MOLMEC/COMMON/support.C:701:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 701 | for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/MOLMEC/COMMON/support.C:450:36: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/support.h:28, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = const BALL::Atom*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -c /<>/source/MOLMEC/COMMON/stretchComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/typenameRuleProcessor.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/typeRuleProcessor.C [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -c /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -c /<>/source/MOLMEC/MINIMIZATION/lineSearch.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -c /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -c /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -c /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -c /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -c /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -c /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -c /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function ‘bool BALL::MMFF94StretchBend::setupBends_()’: /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 189 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function ‘bool BALL::MMFF94StretchBend::setupBends_()’: /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 189 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:193:16: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 193 | for (it1 = it2, ++it1; +it1 ; ++it1) | ^~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function ‘virtual bool BALL::MMFF94Torsion::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:37: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 144 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function ‘virtual bool BALL::MMFF94Torsion::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:37: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 144 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:153:38: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 153 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:163:34: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 163 | for (it3 = atom3->beginBond(); +it3 ; ++it3) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function ‘virtual bool BALL::MMFF94OutOfPlaneBend::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:41: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 130 | for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function ‘virtual bool BALL::MMFF94OutOfPlaneBend::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:41: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 130 | for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it) | ^ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:140:42: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 140 | for (bond_it = central_atom.beginBond(); +bond_it; ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Processors.C In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function ‘virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)’: /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:439:20: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 439 | ait = s.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function ‘virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)’: /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:439:20: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 439 | ait = s.beginAtom(); | ^ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function ‘const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)’: /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:33: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 103 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function ‘const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)’: /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:33: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 103 | ForceFieldComponent::operator = (anb); | ^ /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:39: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 103 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -c /<>/source/MOLMEC/PARAMETER/atomTypes.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -c /<>/source/MOLMEC/PARAMETER/charmmEEF1.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -c /<>/source/MOLMEC/PARAMETER/cosineTorsion.C In file included from /<>/source/MOLMEC/PARAMETER/cosineTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -c /<>/source/MOLMEC/PARAMETER/forceFieldParameters.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -c /<>/source/MOLMEC/PARAMETER/lennardJones.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -c /<>/source/MOLMEC/PARAMETER/potential1210.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticAngleBend.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticBondStretch.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -c /<>/source/MOLMEC/PARAMETER/residueTorsions.C [ 42%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -c /<>/source/MOLMEC/PARAMETER/templates.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:15, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:11, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:15, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:11, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:15, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:11, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -c /<>/source/NMR/anisotropyShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -c /<>/source/NMR/clearShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -c /<>/source/NMR/EFShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -c /<>/source/NMR/empiricalHSShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/NMR/empiricalHSShiftProcessor.h: In member function ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)’: /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:282:9: warning: implicitly-declared ‘BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)’ is deprecated [-Wdeprecated-copy] 282 | class ShiftHyperSurface_ | ^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5, from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/MATHS/cubicSpline2D.h:163:4: note: because ‘BALL::CubicSpline2D’ has user-provided ‘BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)’ 163 | CubicSpline2D(const CubicSpline2D& cs2D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘virtual void BALL::EmpiricalHSShiftProcessor::init()’: /<>/source/NMR/empiricalHSShiftProcessor.C:205:40: note: synthesized method ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)’ first required here 205 | hypersurfaces_[atom_type][tuple]= shs; | ^~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:475:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 475 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:475:30: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 475 | r_it = residue->beginAtom(); | ^ /<>/source/NMR/empiricalHSShiftProcessor.C:488:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 488 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:506:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 506 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:519:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 519 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:532:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 532 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:545:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 545 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChi2Angle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:654:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 654 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:667:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 667 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:681:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 681 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:694:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 694 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:707:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 707 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:721:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 721 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:738:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 738 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:755:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 755 | r_it = residue->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In constructor ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::ShiftHyperSurface_(BALL::String, BALL::String, BALL::String, BALL::String, int)’: /<>/source/NMR/empiricalHSShiftProcessor.C:1641:28: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1641 | s1d_[first_property_] = s; | ^ In file included from /<>/include/BALL/MATHS/cubicSpline2D.h:8, from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5, from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1679:56: warning: implicitly-declared ‘BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)’ is deprecated [-Wdeprecated-copy] 1679 | s2d_ = CubicSpline2D(x_axis, y_axis, sample_values_); | ^ In file included from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5, from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/MATHS/cubicSpline2D.h:163:4: note: because ‘BALL::CubicSpline2D’ has user-provided ‘BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)’ 163 | CubicSpline2D(const CubicSpline2D& cs2D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1732:32: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1732 | s1d_[y_axis_values_[i]] = s; | ^ In file included from /<>/include/BALL/MATHS/cubicSpline2D.h:8, from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5, from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1760:32: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1760 | s1d_[y_axis_values_[i]] = s; | ^ In file included from /<>/include/BALL/MATHS/cubicSpline2D.h:8, from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5, from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/MATHS/cubicSpline1D.h:124:4: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/experiment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/experiment.C.o -c /<>/source/NMR/experiment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/experiment.h:15, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/peakList.h:11, from /<>/include/BALL/NMR/experiment.h:11, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/experiment.h:15, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/peakList.h:11, from /<>/include/BALL/NMR/experiment.h:11, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/experiment.h:15, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/peakList.h:11, from /<>/include/BALL/NMR/experiment.h:11, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -c /<>/source/NMR/HBondShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/HBondShiftProcessor.C: In member function ‘virtual bool BALL::HBondShiftProcessor::finish()’: /<>/source/NMR/HBondShiftProcessor.C:234:42: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 234 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/HBondShiftProcessor.C: In member function ‘virtual bool BALL::HBondShiftProcessor::finish()’: /<>/source/NMR/HBondShiftProcessor.C:234:42: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 234 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ /<>/source/NMR/HBondShiftProcessor.C:242:39: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 242 | for (bi = donors_[d]->beginBond(); +bi; ++bi) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -c /<>/source/NMR/haighMallionShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -c /<>/source/NMR/createSpectrumProcessor.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peak.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/peak.C.o -c /<>/source/NMR/peak.C [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peakList.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/peakList.C.o -c /<>/source/NMR/peakList.C [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -c /<>/source/NMR/shiftModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -c /<>/source/NMR/shiftModule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/spectrum.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -c /<>/source/NMR/spectrum.C In file included from /<>/include/BALL/NMR/spectrum.h:335, from /<>/source/NMR/spectrum.C:5: /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float; BALL::Spectrum::PositionType = float]’: /<>/include/BALL/NMR/spectrum.iC:20:31: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 20 | catch (Exception::OutOfGrid e) | ^ In file included from /<>/include/BALL/NMR/spectrum.h:335, from /<>/source/NMR/spectrum.C:5: /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2; BALL::Spectrum::PositionType = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:46:31: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 46 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:135:32: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 135 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:177:32: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 177 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -c /<>/source/NMR/johnsonBoveyShiftProcessor.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -c /<>/source/NMR/randomCoilShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -c /<>/source/PLUGIN/BALLPlugin.C [ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -c /<>/source/PLUGIN/pluginManager.C [ 47%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -c /<>/source/PLUGIN/pluginHandler.C [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -c /<>/source/QSAR/aromaticityProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/aromaticityProcessor.C:10: /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/aromaticityProcessor.C:10: /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/aromaticityProcessor.C:10: /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘bool BALL::AromaticityProcessor::hasConjugatedDoubleBonds_(BALL::HashSet)’: /<>/source/QSAR/aromaticityProcessor.C:956:16: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 956 | bond_it = it; | ^~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘BALL::Size BALL::AromaticityProcessor::countPiElectrons_(BALL::HashSet&)’: /<>/source/QSAR/aromaticityProcessor.C:1008:29: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1008 | for (j=(*i)->beginBond();j!=(*i)->endBond();++j) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C:1051:29: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1051 | for (j=(*i)->beginBond();j!=(*i)->endBond();++j) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -c /<>/source/QSAR/automaticModelCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/automaticModelCreator.C: In member function ‘void BALL::QSAR::AutomaticModelCreator::optimizeParameters(BALL::QSAR::Model*)’: /<>/source/QSAR/automaticModelCreator.C:35:39: warning: catching polymorphic type ‘class BALL::QSAR::Exception::SingularMatrixError’ by value [-Wcatch-value=] 35 | catch(Exception::SingularMatrixError e) | ^ /<>/source/QSAR/automaticModelCreator.C: In member function ‘BALL::QSAR::Model* BALL::QSAR::AutomaticModelCreator::generateModel()’: /<>/source/QSAR/automaticModelCreator.C:80:43: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 80 | catch(BALL::Exception::GeneralException e) | ^ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -c /<>/source/QSAR/bayesModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -c /<>/source/QSAR/classificationModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -c /<>/source/QSAR/classificationValidation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/configIO.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -c /<>/source/QSAR/configIO.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -c /<>/source/QSAR/connectivityBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityBase.C:109:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 109 | for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:121:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 121 | for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:135:26: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 135 | atom_it = ac.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:136:32: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 136 | bond_it = atom_it->beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityBase.C:136:32: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 136 | bond_it = atom_it->beginBond(); | ^ In file included from /<>/source/QSAR/connectivityBase.C:9: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/connectivityBase.C:138:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 138 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/connectivityBase.C:9: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/connectivityBase.C:138:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 138 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘void BALL::ConnectivityBase::recursion_(std::vector&, const BALL::Atom*, BALL::HashMap&)’: /<>/source/QSAR/connectivityBase.C:195:39: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 195 | for (bond_it = min_atom->beginBond(); bond_it != min_atom->endBond(); ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -c /<>/source/QSAR/connectivityDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/connectivityDescriptors.C:8: /<>/source/QSAR/connectivityDescriptors.C: In member function ‘virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/connectivityDescriptors.C:50:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM (ac, atom_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityDescriptors.C:56:39: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 56 | for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityDescriptors.C: In member function ‘virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityDescriptors.C:56:39: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 56 | for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++) | ^ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -c /<>/source/QSAR/descriptor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/exception.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/exception.C.o -c /<>/source/QSAR/exception.C [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -c /<>/source/QSAR/kernel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -c /<>/source/QSAR/kernelModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/kernelModel.C: In member function ‘virtual void BALL::QSAR::KernelModel::calculateOffsets()’: /<>/source/QSAR/kernelModel.C:60:8: warning: unused variable ‘no_act’ [-Wunused-variable] 60 | int no_act = training_result_.cols(); | ^~~~~~ /<>/source/QSAR/kernelModel.C: In member function ‘virtual void BALL::QSAR::KernelModel::saveToFile(std::string)’: /<>/source/QSAR/kernelModel.C:99:9: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 99 | bool sterr = 0; | ^~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -c /<>/source/QSAR/latentVariableModel.C [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -c /<>/source/QSAR/linearModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -c /<>/source/QSAR/logitModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/Model.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/Model.C.o -c /<>/source/QSAR/Model.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/Model.C: In member function ‘void BALL::QSAR::Model::readDescriptorInformation()’: /<>/source/QSAR/Model.C:182:29: warning: variable ‘y_transform’ set but not used [-Wunused-but-set-variable] 182 | bool transform = 0; bool y_transform = 0; | ^~~~~~~~~~~ /<>/source/QSAR/Model.C: In member function ‘void BALL::QSAR::Model::readVector(Eigen::RowVectorXd&, std::ifstream&, unsigned int, bool)’: /<>/source/QSAR/Model.C:486:94: warning: unused parameter ‘column_vector’ [-Wunused-parameter] 486 | void Model::readVector(Eigen::RowVectorXd & vec, ifstream& in, unsigned int no_cells, bool column_vector) | ~~~~~^~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -c /<>/source/QSAR/modelFactory.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -c /<>/source/QSAR/nBModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/nBModel.C: In member function ‘virtual void BALL::QSAR::NBModel::saveToFile(std::string)’: /<>/source/QSAR/nBModel.C:240:9: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 240 | bool centered_y = 0; | ^~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -c /<>/source/QSAR/nonlinearModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -c /<>/source/QSAR/partialChargeBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeBase.C: In member function ‘virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeBase.C:108:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (it = ac.beginAtom(); it != ac.endAtom(); ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeBase.C: In member function ‘virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeBase.C:108:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (it = ac.beginAtom(); it != ac.endAtom(); ++it) | ^ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -c /<>/source/QSAR/partialChargeDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -c /<>/source/QSAR/partialChargeProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeProcessor.C:85:27: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 85 | atom_it = ac.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeProcessor.C:85:27: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 85 | atom_it = ac.beginAtom(); | ^ In file included from /<>/source/QSAR/partialChargeProcessor.C:12: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/partialChargeProcessor.C:12: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/partialChargeProcessor.C:12: /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -c /<>/source/QSAR/QSARData.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*)’: /<>/source/QSAR/QSARData.C:77:39: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 77 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::set&, bool, bool, bool, bool, bool)’: /<>/source/QSAR/QSARData.C:201:39: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 201 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C:292:44: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 292 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:313:45: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 313 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:330:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 330 | for(int p=no_internal_descriptors; p>/source/QSAR/QSARData.C:332:37: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 332 | if(descriptor_matrix_[p].size()>/source/QSAR/QSARData.C:343:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 343 | for(int act=0; act>/source/QSAR/QSARData.C:345:23: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 345 | if(Y_[act].size()>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::multiset&, bool, bool, bool)’: /<>/source/QSAR/QSARData.C:399:39: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 399 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C:460:45: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 460 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:488:45: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 488 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readCSVFile(const char*, int, bool, bool, const char*, bool, bool)’: /<>/source/QSAR/QSARData.C:1097:44: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 1097 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:1119:45: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 1119 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C: In member function ‘std::vector BALL::QSAR::QSARData::evenSplit(int, int, int) const’: /<>/source/QSAR/QSARData.C:1354:26: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 1354 | if (i%no_test_splits == current_test_split_id) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/registry.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/registry.C.o -c /<>/source/QSAR/registry.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -c /<>/source/QSAR/regressionModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘void BALL::QSAR::RegressionModel::show()’: /<>/source/QSAR/regressionModel.C:48:9: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 48 | bool sterr = 0; | ^~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘virtual void BALL::QSAR::RegressionModel::saveToFile(std::string)’: /<>/source/QSAR/regressionModel.C:129:9: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 129 | bool sterr = 0; | ^~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘virtual void BALL::QSAR::RegressionModel::saveDescriptorInformationToFile(std::ofstream&)’: /<>/source/QSAR/regressionModel.C:259:45: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::multiset::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 259 | bool trained = (training_result_.rows() == descriptor_IDs_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/regressionModel.C:285:45: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 285 | bool trained = (training_result_.rows() == descriptor_names_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -c /<>/source/QSAR/regressionValidation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/regressionValidation.C: In member function ‘virtual void BALL::QSAR::RegressionValidation::testInputData(bool)’: /<>/source/QSAR/regressionValidation.C:252:8: warning: variable ‘col’ set but not used [-Wunused-but-set-variable] 252 | int col = model_->data->descriptor_matrix_.size(); | ^~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -c /<>/source/QSAR/ringPerceptionProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:59:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 59 | BALL_FOREACH_ATOM(ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:59:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 59 | BALL_FOREACH_ATOM(ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:15, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of ‘BALL::TSimpleMolecularGraph::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]’: /<>/source/QSAR/ringPerceptionProcessor.C:89:37: required from here /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:11: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 228 | for (ai = molecule.beginAtom(); +ai; ++ai) | ~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:15, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 230 | for (bi = ai->beginBond(); +bi; ++bi) | ~~~^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -c /<>/source/QSAR/simpleBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleBase.C:8: /<>/source/QSAR/simpleBase.C: In member function ‘virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleBase.C:269:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleBase.C:8: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/simpleBase.C:269:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleBase.C:8: /<>/source/QSAR/simpleBase.C: In member function ‘virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/simpleBase.C:269:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -c /<>/source/QSAR/simpleDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleDescriptors.C:9: /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:677:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 677 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleDescriptors.C:9: /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:677:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 677 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrogenBondDonors::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:746:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 746 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleDescriptors.C:9: /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrogenBondAcceptors::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:815:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 815 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -c /<>/source/QSAR/snBModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/snBModel.C: In member function ‘virtual void BALL::QSAR::SNBModel::saveToFile(std::string)’: /<>/source/QSAR/snBModel.C:234:9: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 234 | bool centered_y = 0; | ^~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/statistics.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -c /<>/source/QSAR/statistics.C /<>/source/QSAR/statistics.C: In static member function ‘static double BALL::QSAR::Statistics::calculateRankCorrelation(std::vector&, std::vector&)’: /<>/source/QSAR/statistics.C:169:28: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 169 | for(Size i=position; i>/source/QSAR/statistics.C:189:28: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 189 | for(Size i=position; i>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -c /<>/source/QSAR/surfaceBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -c /<>/source/QSAR/surfaceDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -c /<>/source/QSAR/svmModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -c /<>/source/QSAR/svrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/validation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/validation.C.o -c /<>/source/QSAR/validation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/allModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -c /<>/source/QSAR/allModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/allModel.C: In member function ‘virtual void BALL::QSAR::ALLModel::saveToFile(std::string)’: /<>/source/QSAR/allModel.C:202:9: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 202 | bool sterr = 0; | ^~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -c /<>/source/QSAR/featureSelection.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::forward(bool, int, bool)’: /<>/source/QSAR/featureSelection.C:134:37: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 134 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::backwardSelection(int, bool)’: /<>/source/QSAR/featureSelection.C:288:37: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 288 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::twinScan(int, bool)’: /<>/source/QSAR/featureSelection.C:449:36: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 449 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C:456:59: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 456 | std::multiset< pair >::iterator it = potential_descriptors.insert(make_pair(1-model_->model_val->getCVRes(), i)); | ^~ /<>/source/QSAR/featureSelection.C:485:36: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 485 | catch(Exception::NoPCAVariance e) | ^ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -c /<>/source/QSAR/gpModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -c /<>/source/QSAR/knnModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -c /<>/source/QSAR/kpcrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -c /<>/source/QSAR/kplsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -c /<>/source/QSAR/ldaModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/ldaModel.C: In member function ‘virtual void BALL::QSAR::LDAModel::saveToFile(std::string)’: /<>/source/QSAR/ldaModel.C:169:9: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 169 | bool centered_y = 0; | ^~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -c /<>/source/QSAR/mlrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/mlrModel.C: In member function ‘virtual void BALL::QSAR::MLRModel::train()’: /<>/source/QSAR/mlrModel.C:48:44: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 48 | catch(BALL::Exception::GeneralException e) | ^ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -c /<>/source/QSAR/oplsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -c /<>/source/QSAR/pcrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -c /<>/source/QSAR/plsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -c /<>/source/QSAR/rrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/rrModel.C: In member function ‘virtual void BALL::QSAR::RRModel::train()’: /<>/source/QSAR/rrModel.C:70:44: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 70 | catch(BALL::Exception::GeneralException e) | ^ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -c /<>/source/SCORING/COMMON/baseFunction.C [ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -c /<>/source/SCORING/COMMON/diffScoringFunction.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -c /<>/source/SCORING/COMMON/diffGridBasedScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -c /<>/source/SCORING/COMMON/gridBasedScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -c /<>/source/SCORING/COMMON/linearBaseFunction.C [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -c /<>/source/SCORING/COMMON/fermiBaseFunction.C [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -c /<>/source/SCORING/COMMON/rescorer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/SCORING/COMMON/rescorer.C: In static member function ‘static void BALL::Rescorer::processMultiMoleculeFile(BALL::ScoringFunction*, BALL::StructurePreparer*, BALL::String, BALL::Rescoring*, bool, double, BALL::String, BALL::GenericMolFile*, BALL::GenericMolFile*, double, bool)’: /<>/source/SCORING/COMMON/rescorer.C:390:45: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 390 | catch (BALL::Exception::GeneralException e) | ^ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -c /<>/source/SCORING/COMMON/scoreGridSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:10, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:9, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:10, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:9, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:10, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:9, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -c /<>/source/SCORING/COMMON/scoringComponent.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -c /<>/source/SCORING/COMMON/scoringFunction.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -c /<>/source/SCORING/COMMON/scoringOptimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/SCORING/COMMON/scoringOptimizer.C: In member function ‘void BALL::ScoringOptimizer::evaluate(double*, double*, double*, BALL::Size*)’: /<>/source/SCORING/COMMON/scoringOptimizer.C:187:43: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 187 | catch(BALL::Exception::GeneralException e) | ^ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -c /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -c /<>/source/SCORING/COMPONENTS/advElectrostatic.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -c /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -c /<>/source/SCORING/COMPONENTS/burialDepth.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -c /<>/source/SCORING/COMPONENTS/buriedPolar.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -c /<>/source/SCORING/COMPONENTS/CHPI.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -c /<>/source/SCORING/COMPONENTS/CHPISlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -c /<>/source/SCORING/COMPONENTS/electrostatic.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -c /<>/source/SCORING/COMPONENTS/fresnoTypes.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:9: /<>/source/SCORING/COMPONENTS/fresnoTypes.C: In member function ‘virtual bool BALL::FresnoTypes::setup()’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:310:6: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 310 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:9: /<>/source/SCORING/COMPONENTS/fresnoTypes.C: In member function ‘virtual bool BALL::FresnoTypes::setup()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:310:6: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 310 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:365:7: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 365 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -c /<>/source/SCORING/COMPONENTS/hydrogenBond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -c /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C: In member function ‘virtual bool BALL::HydrogenBondSlick::setup()’: /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:147:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 147 | for (lig_it = lig->beginAtom(); +lig_it; ++lig_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:173:32: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 173 | for (lig_it = lig->beginAtom(); +lig_it; ++lig_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:179:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 179 | for (rec_it = rec->beginAtom(); +rec_it; ++rec_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -c /<>/source/SCORING/COMPONENTS/lipophilic.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -c /<>/source/SCORING/COMPONENTS/polarity.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -c /<>/source/SCORING/COMPONENTS/PB.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -c /<>/source/SCORING/COMPONENTS/PLP.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/PLP.C: In member function ‘const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)’: /<>/source/SCORING/COMPONENTS/PLP.C:147:32: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 147 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:20: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:4: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/PLP.C: In member function ‘const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)’: /<>/source/SCORING/COMPONENTS/PLP.C:147:32: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 147 | ForceFieldComponent::operator = (anb); | ^ /<>/source/SCORING/COMPONENTS/PLP.C:147:38: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 147 | ForceFieldComponent::operator = (anb); | ^ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:3: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -c /<>/source/SCORING/COMPONENTS/rotationalEntropy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -c /<>/source/SCORING/COMPONENTS/solvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -c /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function ‘virtual double BALL::NonpolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:406:54: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 406 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:27: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 407 | dst = ligand_.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function ‘virtual double BALL::NonpolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:27: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 407 | dst = ligand_.beginAtom(); | ^ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -c /<>/source/SCORING/COMPONENTS/polarSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘virtual double BALL::PolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:261:54: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 261 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:262:34: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 262 | dst = desolv_ligand_.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘virtual double BALL::PolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:262:34: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 262 | dst = desolv_ligand_.beginAtom(); | ^ /<>/source/SCORING/COMPONENTS/polarSolvation.C:457:37: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 457 | it = desolv_protein_.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘bool BALL::PolarSolvation::computeFullCycle_(BALL::System&, BALL::Molecule&, BALL::Molecule&, float&)’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:768:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 768 | for (it = ligand.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:795:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 795 | for (it = protein.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:832:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 832 | for (it = ligand.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:851:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 851 | for (it = ligand.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:874:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 874 | for (it = protein.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:905:25: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 905 | it = system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -c /<>/source/SCORING/COMPONENTS/vanDerWaals.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -c /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function ‘virtual double BALL::VanDerWaalsSlick::updateScore()’: /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:658:54: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 658 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:32: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 659 | dst = vdw_ligand_->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function ‘virtual double BALL::VanDerWaalsSlick::updateScore()’: /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:32: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 659 | dst = vdw_ligand_->beginAtom(); | ^ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:683:33: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 683 | it = vdw_receptor_->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:697:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 697 | it = vdw_ligand_->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring1D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring3D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring4D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/amberEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -c /<>/source/SCORING/FUNCTIONS/gridedMM.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -c /<>/source/SCORING/FUNCTIONS/MMScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -c /<>/source/SCORING/FUNCTIONS/gridedPLP.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -c /<>/source/SCORING/FUNCTIONS/PLPScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/randomEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -c /<>/source/SCORING/FUNCTIONS/PBScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -c /<>/source/SCORING/FUNCTIONS/slickEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -c /<>/source/SCORING/FUNCTIONS/slickScore.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -c /<>/source/SOLVATION/claverieParameter.C [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -c /<>/source/SOLVATION/electrostaticPotentialCalculator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/electrostaticPotentialCalculator.C: In member function ‘float BALL::ElectrostaticPotentialCalculator::operator()(const Vector3&)’: /<>/source/SOLVATION/electrostaticPotentialCalculator.C:64:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/electrostaticPotentialCalculator.C: In member function ‘float BALL::ElectrostaticPotentialCalculator::operator()(const Vector3&)’: /<>/source/SOLVATION/electrostaticPotentialCalculator.C:64:31: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ /<>/source/SOLVATION/electrostaticPotentialCalculator.C:83:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 83 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -c /<>/source/SOLVATION/generalizedBornCase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/generalizedBornCase.C: In member function ‘bool BALL::GeneralizedBornModel::setup(const BALL::AtomContainer&)’: /<>/source/SOLVATION/generalizedBornCase.C:235:29: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 235 | for (it1 = ac_->beginAtom(); +it1; ++it1) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -c /<>/source/SOLVATION/molecularSurfaceGrid.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:19, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:19, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:19, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/molecularSurfaceGrid.C:8: /<>/source/SOLVATION/molecularSurfaceGrid.C: In function ‘BALL::TRegularData3D* BALL::calculateSESGrid(const Vector3&, const Vector3&, float, const BALL::System&, float)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/molecularSurfaceGrid.C:165:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 165 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/molecularSurfaceGrid.C:8: /<>/source/SOLVATION/molecularSurfaceGrid.C: In function ‘BALL::TRegularData3D* BALL::calculateSASGrid(const Vector3&, const Vector3&, float, const BALL::System&, float)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/molecularSurfaceGrid.C:358:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 358 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -c /<>/source/SOLVATION/ooiEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/SOLVATION/ooiEnergy.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/source/SOLVATION/ooiEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/SOLVATION/ooiEnergy.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/source/SOLVATION/ooiEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/SOLVATION/ooiEnergy.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/source/SOLVATION/ooiEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/ooiEnergy.C: In function ‘double BALL::calculateOoiEnergy(BALL::AtomContainer&)’: /<>/source/SOLVATION/ooiEnergy.C:277:34: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 277 | for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/source/SOLVATION/ooiEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/ooiEnergy.C: In function ‘double BALL::calculateOoiEnergy(BALL::AtomContainer&)’: /<>/source/SOLVATION/ooiEnergy.C:277:34: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 277 | for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it) | ^ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -c /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C: In member function ‘virtual bool BALL::Pair6_12InteractionEnergyProcessor::finish()’: /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:406:48: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 406 | for (solute_iterator = fragment_->beginAtom(); +solute_iterator; | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -c /<>/source/SOLVATION/pair6_12RDFIntegrator.C [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -c /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C: In member function ‘virtual bool BALL::PairExpInteractionEnergyProcessor::finish()’: /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:315:48: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 315 | for (solute_iterator = fragment_->beginAtom(); +solute_iterator; | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -c /<>/source/SOLVATION/pairExpRDFIntegrator.C [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -c /<>/source/SOLVATION/poissonBoltzmann.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/poissonBoltzmann.C:15: /<>/source/SOLVATION/poissonBoltzmann.C: In member function ‘bool BALL::FDPB::setupAtomArray(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/poissonBoltzmann.C:267:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 267 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/poissonBoltzmann.C:15: /<>/source/SOLVATION/poissonBoltzmann.C: In member function ‘bool BALL::FDPB::setupAtomArray(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/poissonBoltzmann.C:267:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 267 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/SOLVATION/poissonBoltzmann.C:571:35: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/poissonBoltzmann.C:13: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector4]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -c /<>/source/SOLVATION/solventDescriptor.C [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -c /<>/source/SOLVATION/solventParameter.C [ 71%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -c /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3: /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3: /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3: /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:87:25: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 87 | a_it = ac->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:88:27: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 88 | b_it = a_it->beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:89:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 89 | BALL_FOREACH_ATOM(*ac, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual bool BALL::FPTBondOrderStrategy::readOptions(const BALL::Options&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:30:56: warning: unused parameter ‘options’ [-Wunused-parameter] 30 | bool FPTBondOrderStrategy::readOptions(const Options& options) | ~~~~~~~~~~~~~~~^~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual void BALL::FPTBondOrderStrategy::init()’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:69:13: warning: unused variable ‘result’ [-Wunused-variable] 69 | Penalty result = bond_assignments[i]->compute(); | ^~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_::computeJoinBag(BALL::FPTBondOrderStrategy::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::AdditionalBagProperties_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:853:32: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 853 | DPConfig_ config = *match->first; | ^~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In copy constructor ‘BALL::FPTBondOrderStrategy::BackTrackingState_::BackTrackingState_(const BALL::FPTBondOrderStrategy::BackTrackingState_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1213:21: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1213 | index(other.index) | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::DPBackTracking_::visitIntroduce(BALL::FPTBondOrderStrategy::BackTrackingState_&, BALL::FPTBondOrderStrategy::DPBackTracking_::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1525:41: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1525 | DPConfig_ antecessor = table.begin()->first; | ^~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::DPBackTracking_::visitForget(BALL::FPTBondOrderStrategy::BackTrackingState_&, BALL::FPTBondOrderStrategy::DPBackTracking_::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1722:26: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1722 | DPConfig_ test_entry = successor; | ^~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:35: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -c /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function ‘bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, BALL::PartialBondOrderAssignment::HEURISTIC_INDEX)’: /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:32: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 226 | for (b_it = a_it->beginBond(); +b_it; b_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function ‘bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, BALL::PartialBondOrderAssignment::HEURISTIC_INDEX)’: /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:32: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 226 | for (b_it = a_it->beginBond(); +b_it; b_it++) | ^ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -c /<>/source/STRUCTURE/addHydrogenProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/addHydrogenProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:13, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/addHydrogenProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:13, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/addHydrogenProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:13, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -c /<>/source/STRUCTURE/analyticalSES.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/STRUCTURE/analyticalSES.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/analyticalSES.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/STRUCTURE/analyticalSES.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/analyticalSES.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/STRUCTURE/analyticalSES.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/analyticalSES.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -c /<>/source/STRUCTURE/assignBondOrderProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::AssignBondOrderProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/assignBondOrderProcessor.C:594:51: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 594 | && ((getNumberOfComputedSolutions() < max_number_of_solutions_) || (!max_number_of_solutions_)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::readAtomPenalties_()’: /<>/source/STRUCTURE/assignBondOrderProcessor.C:667:29: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 667 | for (unsigned int i= 0; i < entries.length(); i++) | ~~^~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C:705:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 705 | for (unsigned int k = 0; k < penalties.length(); k++) | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C:799:10: warning: variable ‘min_order’ set but not used [-Wunused-but-set-variable] 799 | Size min_order = 0; | ^~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘void BALL::AssignBondOrderProcessor::storeOriginalConfiguration_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1187:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1187 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1187:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1187 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘float BALL::AssignBondOrderProcessor::evaluatePenalty(BALL::AtomContainer*)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1449:5: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1449 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1449:5: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1449 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -c /<>/source/STRUCTURE/atomBijection.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -c /<>/source/STRUCTURE/atomTyper.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/atomTyper.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/atomTyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/atomTyper.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/atomTyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/atomTyper.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/atomTyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -c /<>/source/STRUCTURE/binaryFingerprintMethods.C /<>/source/STRUCTURE/binaryFingerprintMethods.C: In static member function ‘static bool BALL::BinaryFingerprintMethods::parseBinaryFingerprint(const BALL::String&, std::vector&, unsigned int, const char*)’: /<>/source/STRUCTURE/binaryFingerprintMethods.C:293:36: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 293 | catch (Exception::InvalidFormat e) | ^ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -c /<>/source/STRUCTURE/bindingPocketProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/bindingPocketProcessor.C:239:22: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 239 | ai = s->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/bindingPocketProcessor.C:239:22: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 239 | ai = s->beginAtom(); | ^ /<>/source/STRUCTURE/bindingPocketProcessor.C:245:22: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 245 | ai = s->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C:251:22: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 251 | ai = s->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -c /<>/source/STRUCTURE/buildBondsProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:90:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 90 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:90:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 90 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘BALL::Size BALL::BuildBondsProcessor::buildBondsHashGrid3_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 129 | BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 129 | BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::deleteOverestimatedBonds_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:333:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 333 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -c /<>/source/STRUCTURE/connectedComponentsProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:50:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(ac, atom_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:50:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(ac, atom_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:3: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -c /<>/source/STRUCTURE/connolly.C [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -c /<>/source/STRUCTURE/defaultProcessors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/defaultProcessors.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/defaultProcessors.h:13, from /<>/source/STRUCTURE/defaultProcessors.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/defaultProcessors.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/defaultProcessors.h:13, from /<>/source/STRUCTURE/defaultProcessors.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/defaultProcessors.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/defaultProcessors.h:13, from /<>/source/STRUCTURE/defaultProcessors.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -c /<>/source/STRUCTURE/disulfidBondProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/disulfidBondProcessor.C:15: /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/disulfidBondProcessor.C:15: /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/disulfidBondProcessor.C:15: /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::connect(BALL::Atom*, BALL::Atom*, bool)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:121:31: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 121 | b_it = atom2->beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::connect(BALL::Residue*, BALL::Residue*, bool)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:194:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 194 | a_it = residue2->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::disconnect(BALL::Residue*, BALL::Residue*)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:338:32: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 338 | a_it = residue2->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -c /<>/source/STRUCTURE/DNAMutator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/DNAMutator.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/DNAMutator.h:12, from /<>/source/STRUCTURE/DNAMutator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/DNAMutator.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/DNAMutator.h:12, from /<>/source/STRUCTURE/DNAMutator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/DNAMutator.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/DNAMutator.h:12, from /<>/source/STRUCTURE/DNAMutator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -c /<>/source/STRUCTURE/fragmentDB.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:306:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 306 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:306:39: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 306 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseDelete_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:385:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 385 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseRename_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:423:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 423 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::NormalizeNamesProcessor::countHits_(BALL::HashMap*, int>&, const BALL::Fragment*, BALL::FragmentDB::NormalizeNamesProcessor::CountingMode)’: /<>/source/STRUCTURE/fragmentDB.C:1239:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1239 | for (atom_it = frag->beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const’: /<>/source/STRUCTURE/fragmentDB.C:1483:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1483 | for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const’: /<>/source/STRUCTURE/fragmentDB.C:1483:49: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 1483 | for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it) | ^ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -c /<>/source/STRUCTURE/geometricProperties.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C: In member function ‘virtual bool BALL::FragmentDistanceCollector::finish()’: /<>/source/STRUCTURE/geometricProperties.C:199:60: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 199 | for (composite_it = reference_composite_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C:223:50: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 223 | for (atom_iterator2 = mol_fragment->beginAtom(); +atom_iterator2; ++ atom_iterator2) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C:238:52: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 238 | for (atom_iterator2 = mol_fragment->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -c /<>/source/STRUCTURE/geometricTransformations.C [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -c /<>/source/STRUCTURE/graphEdge.C [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -c /<>/source/STRUCTURE/graphFace.C [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -c /<>/source/STRUCTURE/graphVertex.C [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -c /<>/source/STRUCTURE/HBondProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/HBondProcessor.C:101:25: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 101 | ri = s->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/HBondProcessor.C:101:25: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 101 | ri = s->beginResidue(); | ^ /<>/source/STRUCTURE/HBondProcessor.C:107:25: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 107 | ri = s->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C:113:25: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 113 | ri = s->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/HBondProcessor.C:8: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/HBondProcessor.C:8: /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/HBondProcessor.C:8: /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘bool BALL::HBondProcessor::finishWishartEtAl_()’: /<>/source/STRUCTURE/HBondProcessor.C:525:41: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 525 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C:533:38: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 533 | for (bi = donors_[d]->beginBond(); +bi; ++bi) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -c /<>/source/STRUCTURE/hybridisationProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)’: /<>/source/STRUCTURE/hybridisationProcessor.C:112:29: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 112 | for (b_it1 = a->beginBond(); +b_it1; ++b_it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)’: /<>/source/STRUCTURE/hybridisationProcessor.C:112:29: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 112 | for (b_it1 = a->beginBond(); +b_it1; ++b_it1) | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:114:12: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 114 | b_it2 = b_it1; | ^~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/hybridisationProcessor.C:7: /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:147:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 147 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/hybridisationProcessor.C:7: /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:147:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 147 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:217:28: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 217 | for (ait = ac.beginAtom(); +ait; ++ait) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:365:28: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 365 | for (ait = ac.beginAtom(); +ait; ++ait) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:371:33: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 371 | for (b_it = ait->beginBond(); +b_it; ++b_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/hybridisationProcessor.C:7: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:410:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 410 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/hybridisationProcessor.C:7: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:418:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 418 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -c /<>/source/STRUCTURE/kekulizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:7: /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:7: /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:7: /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::fixAromaticRings_()’: /<>/source/STRUCTURE/kekulizer.C:374:25: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 374 | bit = atom.beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:7: /<>/source/STRUCTURE/kekulizer.C: In member function ‘void BALL::Kekuliser::collectAromaticAtoms_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:587:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 587 | BALL_FOREACH_ATOM(*molecule_, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -c /<>/source/STRUCTURE/molecularSimilarity.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/molecularSimilarity.C: In member function ‘void BALL::MolecularSimilarity::generateFingerprint(BALL::Molecule&, std::vector&)’: /<>/source/STRUCTURE/molecularSimilarity.C:405:26: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 405 | catch(BALL::Exception::GeneralException) | ^~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -c /<>/source/STRUCTURE/mutator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -c /<>/source/STRUCTURE/nucleotideMapping.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -c /<>/source/STRUCTURE/numericalSAS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/numericalSAS.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/source/STRUCTURE/numericalSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/numericalSAS.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/source/STRUCTURE/numericalSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/numericalSAS.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/source/STRUCTURE/numericalSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -c /<>/source/STRUCTURE/peptides.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -c /<>/source/STRUCTURE/peptideBuilder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideBuilder.C: In member function ‘BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/peptideBuilder.C:616:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 616 | for (ai = res.beginPDBAtom(); +ai; ++ai) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideBuilder.C: In member function ‘BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/peptideBuilder.C:616:31: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 616 | for (ai = res.beginPDBAtom(); +ai; ++ai) | ^ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -c /<>/source/STRUCTURE/peptideCapProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideCapProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)’: /<>/source/STRUCTURE/peptideCapProcessor.C:211:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 211 | n_atom = chain.getResidue(0)->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideCapProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)’: /<>/source/STRUCTURE/peptideCapProcessor.C:211:44: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 211 | n_atom = chain.getResidue(0)->beginAtom(); | ^ /<>/source/STRUCTURE/peptideCapProcessor.C:239:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 239 | n_atom = chain.getResidue(1)->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -c /<>/source/STRUCTURE/radialDistributionFunction.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -c /<>/source/STRUCTURE/reconstructFragmentProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function ‘static BALL::Triple BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet&)’: /<>/source/STRUCTURE/reconstructFragmentProcessor.C:77:34: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | bond = (*current)->endBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function ‘static BALL::Triple BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet&)’: /<>/source/STRUCTURE/reconstructFragmentProcessor.C:77:34: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | bond = (*current)->endBond(); | ^ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -c /<>/source/STRUCTURE/RDFIntegrator.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -c /<>/source/STRUCTURE/RDFParameter.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -c /<>/source/STRUCTURE/RDFSection.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -c /<>/source/STRUCTURE/reducedSurface.C In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/STRUCTURE/reducedSurface.h:13, from /<>/source/STRUCTURE/reducedSurface.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/reducedSurface.C:1883:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/reducedSurface.C:8: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -c /<>/source/STRUCTURE/residueChecker.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/residueChecker.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/residueChecker.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/residueChecker.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkCompleteness(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/residueChecker.C:218:38: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 218 | for (atom_it = reference.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:224:36: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 224 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkAtomPositions(const BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/residueChecker.C:278:32: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 278 | for (atom_it = res.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:298:20: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 298 | for (atom_it2 = atom_it, ++atom_it2; +atom_it2; ++atom_it2) | ^~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/residueChecker.C:7: /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/residueChecker.C:7: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/residueChecker.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/residueChecker.C:7: /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:397:37: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 397 | for (atom_it = residue.beginAtom(); +atom_it && (first == 0 || second == 0); ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -c /<>/source/STRUCTURE/rGroupAssembler.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -c /<>/source/STRUCTURE/ringAnalyser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -c /<>/source/STRUCTURE/RSEdge.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -c /<>/source/STRUCTURE/RSFace.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -c /<>/source/STRUCTURE/RSVertex.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -c /<>/source/STRUCTURE/SASEdge.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -c /<>/source/STRUCTURE/SASFace.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -c /<>/source/STRUCTURE/SASVertex.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -c /<>/source/STRUCTURE/sdGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:56:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 56 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:56:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 56 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:89:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 89 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:117:6: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 117 | BALL_FOREACH_ATOM_BOND(*at_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:117:6: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 117 | BALL_FOREACH_ATOM_BOND(*at_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:143:7: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 143 | BALL_FOREACH_ATOM_BOND(*partner, next_bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::clear()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:199:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 199 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::generateSD(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:252:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 252 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::computeShelleyPriorities_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:311:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 311 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:318:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 318 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:324:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 324 | BALL_FOREACH_ATOM_BOND(*at_it, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:337:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 337 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::treatChains_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:992:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 992 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1103:4: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1103 | BALL_FOREACH_ATOM_BOND(*first_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1116:4: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1116 | BALL_FOREACH_ATOM_BOND(*first_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘BALL::Angle BALL::SDGenerator::computeAngularSeparation_(BALL::Atom*)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1139:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1139 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘std::vector BALL::SDGenerator::sequenceSubstituents_(BALL::Atom*)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1235:3: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1235 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1353:6: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1353 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::assembleSD_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1608:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1608 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1730:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1730 | BALL_FOREACH_ATOM_BOND(*seed_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -c /<>/source/STRUCTURE/SESEdge.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -c /<>/source/STRUCTURE/SESFace.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -c /<>/source/STRUCTURE/SESVertex.C [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -c /<>/source/STRUCTURE/secondaryStructureProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -c /<>/source/STRUCTURE/sideChainPlacementProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sideChainPlacementProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/sideChainPlacementProcessor.C:362:57: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 362 | for ( at_it_scwrled=res_it_scwrled->beginPDBAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sideChainPlacementProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/sideChainPlacementProcessor.C:362:57: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 362 | for ( at_it_scwrled=res_it_scwrled->beginPDBAtom(); | ^ /<>/source/STRUCTURE/sideChainPlacementProcessor.C:393:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 393 | for ( at_it_ori = to_mutate[j].first->beginPDBAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -c /<>/source/STRUCTURE/smilesParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -c /<>/source/STRUCTURE/smartsParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/smartsParser.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/smartsParser.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/smartsParser.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/smartsParser.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/smartsParser.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/smartsParser.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -c /<>/source/STRUCTURE/smartsMatcher.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -c /<>/source/STRUCTURE/solventAccessibleSurface.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -c /<>/source/STRUCTURE/solventExcludedSurface.C In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/circle3.h:15, from /<>/include/BALL/STRUCTURE/RSEdge.h:17, from /<>/include/BALL/STRUCTURE/SESEdge.h:13, from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:9, from /<>/source/STRUCTURE/solventExcludedSurface.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/solventExcludedSurface.C:1587:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:45, from /<>/source/STRUCTURE/solventExcludedSurface.C:5: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/circle3.h:15, from /<>/include/BALL/STRUCTURE/RSEdge.h:17, from /<>/include/BALL/STRUCTURE/SESEdge.h:13, from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:9, from /<>/source/STRUCTURE/solventExcludedSurface.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/solventExcludedSurface.C:2156:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:45, from /<>/source/STRUCTURE/solventExcludedSurface.C:5: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -c /<>/source/STRUCTURE/structureMapper.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Size BALL::StructureMapper::countFragments_(const BALL::AtomContainer&) const’: /<>/source/STRUCTURE/structureMapper.C:54:35: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 54 | for (it = ac.beginAtomContainer(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In static member function ‘static BALL::Matrix4x4 BALL::StructureMapper::matchBackboneAtoms(const BALL::Residue&, const BALL::Residue&)’: /<>/source/STRUCTURE/structureMapper.C:425:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 425 | for (atom_it = r1.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C:448:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 448 | for (atom_it = r2.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘std::vector >& BALL::StructureMapper::searchPattern(std::vector&, BALL::AtomContainer&, double, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:556:38: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 556 | for (ac_it = ac.beginAtomContainer(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘std::vector >& BALL::StructureMapper::searchPattern(std::vector&, BALL::AtomContainer&, double, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:556:38: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ first required here 556 | for (ac_it = ac.beginAtomContainer(); | ^ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map&, BALL::Size&, double&, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:713:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 713 | for(atom_it = P1.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map&, BALL::Size&, double&, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:713:30: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 713 | for(atom_it = P1.beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/STRUCTURE/structureMapper.C:740:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 740 | for(atom_it = P2.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/CONCEPT/bidirectionalIterator.h:9, from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/structureMapper.C:774:34: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/structureMapper.C:9: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/CONCEPT/bidirectionalIterator.h:9, from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/STRUCTURE/structureMapper.C:865:40: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/structureMapper.C:9: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector3]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -c /<>/source/STRUCTURE/surfaceProcessor.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -c /<>/source/STRUCTURE/triangle.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -c /<>/source/STRUCTURE/triangleEdge.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -c /<>/source/STRUCTURE/trianglePoint.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -c /<>/source/STRUCTURE/triangulatedSAS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/triangulatedSAS.C: In member function ‘void BALL::SASTriangulator::onePointOutside(BALL::Index, BALL::Triangle*, BALL::TriangulatedSurface&, BALL::HashGrid3&)’: /<>/source/STRUCTURE/triangulatedSAS.C:426:18: warning: variable ‘v2’ set but not used [-Wunused-but-set-variable] 426 | TrianglePoint* v2; | ^~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/CONCEPT/bidirectionalIterator.h:9, from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/triangulatedSAS.C:583:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/triangulatedSAS.h:49, from /<>/source/STRUCTURE/triangulatedSAS.C:15: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TrianglePoint*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -c /<>/source/STRUCTURE/triangulatedSES.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -c /<>/source/STRUCTURE/triangulatedSurface.C [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -c /<>/source/STRUCTURE/UCK.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -c /<>/source/STRUCTURE/residueRotamerSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/residueRotamerSet.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/residueRotamerSet.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/residueRotamerSet.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C: In member function ‘BALL::Rotamer BALL::ResidueRotamerSet::getRotamer(const BALL::Residue&) const’: /<>/source/STRUCTURE/residueRotamerSet.C:636:37: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 636 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:671:37: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 671 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:706:37: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 706 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:741:37: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 741 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -c /<>/source/STRUCTURE/rotamerLibrary.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -c /<>/source/STRUCTURE/RMSDMinimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -c /<>/build/source/STRUCTURE/smilesParserParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -c /<>/build/source/STRUCTURE/smilesParserLexer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/STRUCTURE/smilesParserLexer.C: At global scope: /<>/build/source/STRUCTURE/smilesParserLexer.C:1933:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1933 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -c /<>/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y: In function ‘int SmartsParserparse()’: source/STRUCTURE/smartsParserParser.y:369:50: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:375:50: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:380:54: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:386:54: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:472:54: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:513:54: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:12: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:31: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(BALL::SmartsParser::SPAtom::Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -c /<>/build/source/STRUCTURE/smartsParserLexer.C /<>/build/source/STRUCTURE/smartsParserLexer.C:2023:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 2023 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -c /<>/source/DOCKING/COMMON/conformation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -c /<>/source/DOCKING/COMMON/constraints.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DOCKING/COMMON/constraints.h:10, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DOCKING/COMMON/constraints.h:10, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DOCKING/COMMON/constraints.h:10, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -c /<>/source/DOCKING/COMMON/conformationSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -c /<>/source/DOCKING/COMMON/dockingAlgorithm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In member function ‘virtual double BALL::DockingAlgorithm::dockLigand(BALL::AtomContainer&, bool)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:304:53: warning: unused parameter ‘ligand’ [-Wunused-parameter] 304 | double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose) | ~~~~~~~~~~~~~~~^~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:304:66: warning: unused parameter ‘verbose’ [-Wunused-parameter] 304 | double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose) | ~~~~~^~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In member function ‘void BALL::DockingAlgorithm::processMultiMoleculeFile(std::string, std::string, double, std::vector*, BALL::String, BALL::String)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:549:44: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 549 | catch(BALL::Exception::GeneralException e) | ^ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In static member function ‘static BALL::Matrix4x4 BALL::DockingAlgorithm::mapCompounds(const BALL::AtomContainer&, const BALL::AtomContainer&, BALL::Size&, double&, double, double, double)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:655:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 655 | for (atom_it = S1.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:680:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 680 | for (atom_it = S2.beginAtom(); +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/include/BALL/FORMAT/paramFile.h:8, from /<>/include/BALL/DATATYPE/options.h:22, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:713:36: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/constraints.h:26, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/include/BALL/FORMAT/paramFile.h:8, from /<>/include/BALL/DATATYPE/options.h:22, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:798:38: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:12: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/constraints.h:26, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/DATATYPE/hashGrid.h:209:4: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector3]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -c /<>/source/DOCKING/COMMON/dockResult.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockResult.C: In member function ‘bool BALL::DockResult::readDockResult(std::istream&)’: /<>/source/DOCKING/COMMON/dockResult.C:402:24: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 402 | catch (Exception::InvalidFormat) | ^~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockResult.C:419:24: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 419 | catch (Exception::InvalidFormat) | ^~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -c /<>/source/DOCKING/COMMON/flexDefinition.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -c /<>/source/DOCKING/COMMON/flexibleMolecule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -c /<>/source/DOCKING/COMMON/gridAnalysis.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -c /<>/source/DOCKING/COMMON/poseClustering.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/poseClustering.C: In member function ‘bool BALL::PoseClustering::nearestNeighborChainCompute_()’: /<>/source/DOCKING/COMMON/poseClustering.C:927:8: warning: unused variable ‘run_parallel’ [-Wunused-variable] 927 | bool run_parallel = options.getBool(PoseClustering::Option::RUN_PARALLEL); | ^~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -c /<>/source/DOCKING/COMMON/receptor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -c /<>/source/DOCKING/COMMON/result.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -c /<>/source/DOCKING/COMMON/sideChainOptimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -c /<>/source/DOCKING/COMMON/staticLigandFragment.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -c /<>/source/DOCKING/COMMON/structurePreparer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -c /<>/source/DOCKING/GENETICDOCK/dockProblem.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -c /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -c /<>/source/DOCKING/GENETICDOCK/genes.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -c /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/MATHS/quaternion.h:8, from /<>/include/BALL/DOCKING/GENETICDOCK/genes.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/MATHS/quaternion.h:8, from /<>/include/BALL/DOCKING/GENETICDOCK/genes.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/MATHS/quaternion.h:8, from /<>/include/BALL/DOCKING/GENETICDOCK/genes.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -c /<>/source/DOCKING/GENETICDOCK/geneticIndividual.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -c /<>/source/DOCKING/GENETICDOCK/parameter.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -c /<>/source/DOCKING/GENETICDOCK/rotateBond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -c /<>/source/DOCKING/GENETICDOCK/rotateBonds.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -c /<>/source/DOCKING/IMGDOCK/IMGDock.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -c /<>/source/SYSTEM/binaryFileAdaptor.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -c /<>/source/SYSTEM/directory.C [ 90%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/file.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -c /<>/source/SYSTEM/file.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -c /<>/source/SYSTEM/fileSystem.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o -c /<>/source/SYSTEM/mutex.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -c /<>/source/SYSTEM/networking.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/path.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -c /<>/source/SYSTEM/path.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o -c /<>/source/SYSTEM/simpleDownloader.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -c /<>/source/SYSTEM/sysinfo.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -c /<>/source/SYSTEM/timer.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -c /<>/source/XRAY/crystalGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/XRAY/crystalGenerator.C: In member function ‘std::__cxx11::list BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)’: /<>/source/XRAY/crystalGenerator.C:269:20: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 269 | temp_mit = mit; | ^~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/XRAY/crystalGenerator.C: In member function ‘std::__cxx11::list BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)’: /<>/source/XRAY/crystalGenerator.C:269:20: note: synthesized method ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ first required here 269 | temp_mit = mit; | ^~~ /<>/source/XRAY/crystalGenerator.C:272:15: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 272 | mit = temp_mit; | ^~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -c /<>/source/XRAY/crystalInfo.C [ 95%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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/<>/source/XRAY/spaceGroupParameters.C:31:59: warning: unused parameter ‘parameters’ [-Wunused-parameter] 31 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no) | ~~~~~~~~~~~~^~~~~~~~~~ /<>/source/XRAY/spaceGroupParameters.C:31:86: warning: unused parameter ‘iucr_no’ [-Wunused-parameter] 31 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no) | ~~~~~~~~~~~~~~~^~~~~~~ [ 95%] Linking CXX shared library lib/libBALL.so /usr/bin/cmake -E cmake_link_script CMakeFiles/BALL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libBALL.so.1.5 -o lib/libBALL.so.1.5 CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o 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/<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_atomOverview.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_atomOverview.h /<>/source/VIEW/DIALOGS/atomOverview.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_bondProperties.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_bondProperties.h /<>/source/VIEW/DIALOGS/bondProperties.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_clippingDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_clippingDialog.h /<>/source/VIEW/DIALOGS/clippingDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /<>/source/VIEW/DIALOGS/coloringSettingsDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_compositeProperties.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_compositeProperties.h /<>/source/VIEW/DIALOGS/compositeProperties.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /<>/source/VIEW/DIALOGS/contourSurfaceDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_displayProperties.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_displayProperties.h /<>/source/VIEW/DIALOGS/displayProperties.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_dockDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockDialog.h /<>/source/VIEW/DIALOGS/dockDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_dockProgressDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockProgressDialog.h /<>/source/VIEW/DIALOGS/dockProgressDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_dockResultDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockResultDialog.h /<>/source/VIEW/DIALOGS/dockResultDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /<>/source/VIEW/DIALOGS/downloadElectronDensity.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_downloadPDBFile.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_downloadPDBFile.h /<>/source/VIEW/DIALOGS/downloadPDBFile.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_editSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editSettings.h /<>/source/VIEW/DIALOGS/editSettings.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_editSingleShortcut.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editSingleShortcut.h /<>/source/VIEW/DIALOGS/editSingleShortcut.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /<>/source/VIEW/DIALOGS/editorPDBInfoDialog.ui [ 66%] Generating include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /<>/source/VIEW/DIALOGS/exportGeometryDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /<>/source/VIEW/DIALOGS/fieldLinesDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /<>/source/VIEW/DIALOGS/generateCrystalDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_gridColorWidget.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_gridColorWidget.h /<>/source/VIEW/DIALOGS/gridColorWidget.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /<>/source/VIEW/DIALOGS/gridVisualizationDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_labelDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_labelDialog.h /<>/source/VIEW/DIALOGS/labelDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_lightSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_lightSettings.h /<>/source/VIEW/DIALOGS/lightSettings.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_mainControlPreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_mainControlPreferences.h /<>/source/VIEW/DIALOGS/mainControlPreferences.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_materialSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_materialSettings.h /<>/source/VIEW/DIALOGS/materialSettings.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_minimizationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_minimizationDialog.h /<>/source/VIEW/DIALOGS/minimizationDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /<>/source/VIEW/DIALOGS/modelSettingsDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_networkPreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_networkPreferences.h /<>/source/VIEW/DIALOGS/networkPreferences.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_openSavePreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_openSavePreferences.h /<>/source/VIEW/DIALOGS/openSavePreferences.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /<>/source/VIEW/DIALOGS/parsedFunctionDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_peptideDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_peptideDialog.h /<>/source/VIEW/DIALOGS/peptideDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_pluginDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_pluginDialog.h /<>/source/VIEW/DIALOGS/pluginDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_preferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_preferences.h /<>/source/VIEW/DIALOGS/preferences.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_propEditorWidget.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_propEditorWidget.h /<>/source/VIEW/DIALOGS/propEditorWidget.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_propertyEditor.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_propertyEditor.h /<>/source/VIEW/DIALOGS/propertyEditor.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_pubchemDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_pubchemDialog.h /<>/source/VIEW/DIALOGS/pubchemDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /<>/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.ui [ 69%] Generating include/BALL/VIEW/UIC/ui_setCamera.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_setCamera.h /<>/source/VIEW/DIALOGS/setCamera.ui [ 72%] Generating include/BALL/VIEW/UIC/ui_setClippingPlane.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_setClippingPlane.h /<>/source/VIEW/DIALOGS/setClippingPlane.ui [ 72%] Generating include/BALL/VIEW/UIC/ui_shortcutDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h /<>/source/VIEW/DIALOGS/shortcutDialog.ui [ 72%] Generating include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /<>/source/VIEW/DIALOGS/snapShotVisualisation.ui [ 72%] Generating include/BALL/VIEW/UIC/ui_stageSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_stageSettings.h /<>/source/VIEW/DIALOGS/stageSettings.ui [ 72%] Generating include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /<>/source/VIEW/DIALOGS/stereoSettingsDialog.ui [ 72%] Automatic MOC for target VIEW /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 72%] Built target VIEW_autogen make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color= Scanning dependencies of target VIEW make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build make[5]: Entering directory '/<>/build' [ 72%] Building CXX object CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -c /<>/build/VIEW_autogen/mocs_compilation.cpp In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:29: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:29: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:74: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:9, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 72%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o -c /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o -c /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h:13, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C:8: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 72%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o -c /<>/source/VIEW/DIALOGS/atomOverview.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/atomOverview.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/atomOverview.h:13, from /<>/source/VIEW/DIALOGS/atomOverview.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/atomOverview.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/atomOverview.h:13, from /<>/source/VIEW/DIALOGS/atomOverview.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/atomOverview.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/atomOverview.h:13, from /<>/source/VIEW/DIALOGS/atomOverview.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/atomOverview.C:9: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/atomOverview.C:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o -c /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/VIEW/DIALOGS/amberConfigurationDialog.C:10: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o -c /<>/source/VIEW/DIALOGS/bondProperties.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/DIALOGS/bondProperties.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/VIEW/DIALOGS/bondProperties.h:12, from /<>/source/VIEW/DIALOGS/bondProperties.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/DIALOGS/bondProperties.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/VIEW/DIALOGS/bondProperties.h:12, from /<>/source/VIEW/DIALOGS/bondProperties.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/DIALOGS/bondProperties.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/VIEW/DIALOGS/bondProperties.h:12, from /<>/source/VIEW/DIALOGS/bondProperties.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o -c /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.C:10: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/contourSurfaceDialog.C.o -c /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h:12, from /<>/source/VIEW/DIALOGS/contourSurfaceDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/coloringSettingsDialog.C.o -c /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h:17, from /<>/source/VIEW/DIALOGS/coloringSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/compositeProperties.C.o -c /<>/source/VIEW/DIALOGS/compositeProperties.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:18, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:15, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:18, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:15, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/build/include/BALL/VIEW/UIC/ui_compositeProperties.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:18, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/DIALOGS/compositeProperties.h:15, from /<>/source/VIEW/DIALOGS/compositeProperties.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/clippingDialog.C.o -c /<>/source/VIEW/DIALOGS/clippingDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/clippingDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/clippingDialog.h:13, from /<>/source/VIEW/DIALOGS/clippingDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/clippingDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/clippingDialog.h:13, from /<>/source/VIEW/DIALOGS/clippingDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/clippingDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/clippingDialog.h:13, from /<>/source/VIEW/DIALOGS/clippingDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/clippingDialog.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/clippingDialog.C:8: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockDialog.C.o -c /<>/source/VIEW/DIALOGS/dockDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/VIEW/DIALOGS/dockDialog.C:17: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/VIEW/DIALOGS/dockDialog.C:17: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/VIEW/DIALOGS/dockDialog.C:17: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockDialog.C:18: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/dockDialog.C:21: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/dockDialog.C:21: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C: In member function ‘const BALL::VIEW::DockDialog& BALL::VIEW::DockDialog::operator=(const BALL::VIEW::DockDialog&)’: /<>/source/VIEW/DIALOGS/dockDialog.C:140:42: warning: implicitly-declared ‘BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 140 | radius_rule_processor_ = dock_dialog.radius_rule_processor_; | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because ‘BALL::RadiusRuleProcessor’ has user-provided ‘BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)’ 43 | RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C:141:42: warning: implicitly-declared ‘BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 141 | charge_rule_processor_ = dock_dialog.charge_rule_processor_; | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:22, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because ‘BALL::ChargeRuleProcessor’ has user-provided ‘BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)’ 43 | ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:26, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/STRUCTURE/defaultProcessors.h: In member function ‘BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(const BALL::AssignRadiusProcessor&)’: /<>/include/BALL/STRUCTURE/defaultProcessors.h:62:20: warning: implicitly-declared ‘BALL::UnaryProcessor& BALL::UnaryProcessor::operator=(const BALL::UnaryProcessor&)’ is deprecated [-Wdeprecated-copy] 62 | class BALL_EXPORT AssignRadiusProcessor | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/stringHashMap.h:23, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:14, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/processor.h:75:3: note: because ‘BALL::UnaryProcessor’ has user-provided ‘BALL::UnaryProcessor::UnaryProcessor(const BALL::UnaryProcessor&) [with T = BALL::Atom]’ 75 | UnaryProcessor | ^~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C: In member function ‘const BALL::VIEW::DockDialog& BALL::VIEW::DockDialog::operator=(const BALL::VIEW::DockDialog&)’: /<>/source/VIEW/DIALOGS/dockDialog.C:142:37: note: synthesized method ‘BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(const BALL::AssignRadiusProcessor&)’ first required here 142 | radius_processor_ = dock_dialog.radius_processor_; | ^~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C: In member function ‘bool BALL::VIEW::DockDialog::applyProcessors_()’: /<>/source/VIEW/DIALOGS/dockDialog.C:533:59: warning: implicitly-declared ‘BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 533 | charge_rule_processor_ = ChargeRuleProcessor(inifile); | ^ In file included from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:22, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because ‘BALL::ChargeRuleProcessor’ has user-provided ‘BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)’ 43 | ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C:549:59: warning: implicitly-declared ‘BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 549 | radius_rule_processor_ = RadiusRuleProcessor(inifile); | ^ In file included from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because ‘BALL::RadiusRuleProcessor’ has user-provided ‘BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)’ 43 | RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C: In member function ‘void BALL::VIEW::DockDialog::okPressed()’: /<>/source/VIEW/DIALOGS/dockDialog.C:763:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 763 | for (it = docking_partner1_->beginAtomContainer(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockDialog.C: In member function ‘void BALL::VIEW::DockDialog::okPressed()’: /<>/source/VIEW/DIALOGS/dockDialog.C:763:52: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ first required here 763 | for (it = docking_partner1_->beginAtomContainer(); +it; ++it) | ^ /<>/source/VIEW/DIALOGS/dockDialog.C:767:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 767 | for (it = docking_partner2_->beginAtomContainer(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/source/VIEW/DIALOGS/dockDialog.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockProgressDialog.C.o -c /<>/source/VIEW/DIALOGS/dockProgressDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:18, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/DIALOGS/dockProgressDialog.h:14, from /<>/source/VIEW/DIALOGS/dockProgressDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/dockResultDialog.C.o -c /<>/source/VIEW/DIALOGS/dockResultDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockResultDialog.C: In member function ‘void BALL::VIEW::DockResultDialog::redock_()’: /<>/source/VIEW/DIALOGS/dockResultDialog.C:490:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 490 | it = redock_partner2_->beginAtomContainer(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/include/BALL/VIEW/DIALOGS/dockResultDialog.h:14, from /<>/source/VIEW/DIALOGS/dockResultDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/dockResultDialog.C: In member function ‘void BALL::VIEW::DockResultDialog::redock_()’: /<>/source/VIEW/DIALOGS/dockResultDialog.C:490:46: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ first required here 490 | it = redock_partner2_->beginAtomContainer(); | ^ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadPDBFile.C.o -c /<>/source/VIEW/DIALOGS/downloadPDBFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:11: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/downloadPDBFile.C:11: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadElectronDensity.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/downloadElectronDensity.C.o -c /<>/source/VIEW/DIALOGS/downloadElectronDensity.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:14: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/downloadElectronDensity.C:14: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSettings.C.o -c /<>/source/VIEW/DIALOGS/editSettings.C [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/editSingleShortcut.C.o -c /<>/source/VIEW/DIALOGS/editSingleShortcut.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/editSingleShortcut.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/displayProperties.C.o -c /<>/source/VIEW/DIALOGS/displayProperties.C In file included from /<>/source/VIEW/DIALOGS/displayProperties.C:15: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/displayProperties.C:15: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/displayProperties.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/displayProperties.h:19, from /<>/source/VIEW/DIALOGS/displayProperties.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/displayProperties.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/displayProperties.h:19, from /<>/source/VIEW/DIALOGS/displayProperties.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/displayProperties.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/displayProperties.h:19, from /<>/source/VIEW/DIALOGS/displayProperties.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/fieldLinesDialog.C.o -c /<>/source/VIEW/DIALOGS/fieldLinesDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h:13, from /<>/source/VIEW/DIALOGS/fieldLinesDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/FDPBDialog.C.o -c /<>/source/VIEW/DIALOGS/FDPBDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/FDPBDialog.C:6: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ /<>/source/VIEW/DIALOGS/FDPBDialog.C: In member function ‘bool BALL::VIEW::FDPBDialog::applyProcessors_()’: /<>/source/VIEW/DIALOGS/FDPBDialog.C:311:59: warning: implicitly-declared ‘BALL::ChargeRuleProcessor& BALL::ChargeRuleProcessor::operator=(const BALL::ChargeRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 311 | charge_rule_processor_ = ChargeRuleProcessor(inifile); | ^ In file included from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:28, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/MOLMEC/COMMON/chargeRuleProcessor.h:43:3: note: because ‘BALL::ChargeRuleProcessor’ has user-provided ‘BALL::ChargeRuleProcessor::ChargeRuleProcessor(const BALL::ChargeRuleProcessor&)’ 43 | ChargeRuleProcessor(const ChargeRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/FDPBDialog.C:326:59: warning: implicitly-declared ‘BALL::RadiusRuleProcessor& BALL::RadiusRuleProcessor::operator=(const BALL::RadiusRuleProcessor&)’ is deprecated [-Wdeprecated-copy] 326 | radius_rule_processor_ = RadiusRuleProcessor(inifile); | ^ In file included from /<>/include/BALL/VIEW/DIALOGS/FDPBDialog.h:24, from /<>/source/VIEW/DIALOGS/FDPBDialog.C:5: /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:43:3: note: because ‘BALL::RadiusRuleProcessor’ has user-provided ‘BALL::RadiusRuleProcessor::RadiusRuleProcessor(const BALL::RadiusRuleProcessor&)’ 43 | RadiusRuleProcessor(const RadiusRuleProcessor& rule_processor); | ^~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/generateCrystalDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/generateCrystalDialog.C.o -c /<>/source/VIEW/DIALOGS/generateCrystalDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h:18, from /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/generateCrystalDialog.C: In member function ‘bool BALL::VIEW::GenerateCrystalDialog::initSpaceGroupList()’: /<>/source/VIEW/DIALOGS/generateCrystalDialog.C:80:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 80 | if (space_group_combobox->count() != sg_list_.getNumberOfKeys()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/gridVisualizationDialog.C.o -c /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h:13, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:8: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/gridVisualizationDialog.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/labelDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/labelDialog.C.o -c /<>/source/VIEW/DIALOGS/labelDialog.C In file included from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/VIEW/DIALOGS/labelDialog.C:11: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/VIEW/DIALOGS/labelDialog.C:11: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/DIALOGS/labelDialog.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/VIEW/DIALOGS/labelDialog.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/DIALOGS/labelDialog.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/VIEW/DIALOGS/labelDialog.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/DIALOGS/labelDialog.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/VIEW/DIALOGS/labelDialog.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/lightSettings.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/lightSettings.C.o -c /<>/source/VIEW/DIALOGS/lightSettings.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/lightSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/mainControlPreferences.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/mainControlPreferences.C.o -c /<>/source/VIEW/DIALOGS/mainControlPreferences.C [ 75%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/materialSettings.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/materialSettings.C.o -c /<>/source/VIEW/DIALOGS/materialSettings.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/materialSettings.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/DIALOGS/materialSettings.C: In member function ‘virtual void BALL::VIEW::MaterialSettings::editAmbientColor()’: /<>/source/VIEW/DIALOGS/materialSettings.C:257:11: warning: variable ‘color’ set but not used [-Wunused-but-set-variable] 257 | QColor color = VIEW::chooseColor(ambient_color_label); | ^~~~~ /<>/source/VIEW/DIALOGS/materialSettings.C: In member function ‘virtual void BALL::VIEW::MaterialSettings::editSpecularityColor()’: /<>/source/VIEW/DIALOGS/materialSettings.C:265:11: warning: variable ‘color’ set but not used [-Wunused-but-set-variable] 265 | QColor color = VIEW::chooseColor(specularity_color_label); | ^~~~~ /<>/source/VIEW/DIALOGS/materialSettings.C: In member function ‘virtual void BALL::VIEW::MaterialSettings::editReflectivenessColor()’: /<>/source/VIEW/DIALOGS/materialSettings.C:273:11: warning: variable ‘color’ set but not used [-Wunused-but-set-variable] 273 | QColor color = VIEW::chooseColor(reflectiveness_color_label); | ^~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/minimizationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/minimizationDialog.C.o -c /<>/source/VIEW/DIALOGS/minimizationDialog.C [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modelSettingsDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modelSettingsDialog.C.o -c /<>/source/VIEW/DIALOGS/modelSettingsDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h:13, from /<>/source/VIEW/DIALOGS/modelSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modifyRepresentationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/modifyRepresentationDialog.C.o -c /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C In file included from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:6: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:21: /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C: In member function ‘void BALL::VIEW::ModifyRepresentationDialog::calculateIncludedVertices_(std::vector&, const BALL::VIEW::Mesh&, BALL::HashSet&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:710:6: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 710 | BALL_FOREACH_ATOM(*acont, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h:13, from /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularDynamicsDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularDynamicsDialog.C.o -c /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularFileDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/molecularFileDialog.C.o -c /<>/source/VIEW/DIALOGS/molecularFileDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/molecularFileDialog.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C.o -c /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/stringHashMap.h:11, from /<>/include/BALL/FORMAT/INIFile.h:11, from /<>/include/BALL/VIEW/KERNEL/preferencesEntry.h:11, from /<>/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h:13, from /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/networkPreferences.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/networkPreferences.C.o -c /<>/source/VIEW/DIALOGS/networkPreferences.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/networkPreferences.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/networkPreferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/networkPreferences.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/networkPreferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/networkPreferences.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/DIALOGS/networkPreferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/openSavePreferences.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/openSavePreferences.C.o -c /<>/source/VIEW/DIALOGS/openSavePreferences.C [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/parsedFunctionDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/parsedFunctionDialog.C.o -c /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/parsedFunctionDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/peptideDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/peptideDialog.C.o -c /<>/source/VIEW/DIALOGS/peptideDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/include/BALL/VIEW/DIALOGS/peptideDialog.h:13, from /<>/source/VIEW/DIALOGS/peptideDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pluginDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pluginDialog.C.o -c /<>/source/VIEW/DIALOGS/pluginDialog.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/pluginDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/pluginDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/pluginDialog.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/pluginDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/preferences.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/preferences.C.o -c /<>/source/VIEW/DIALOGS/preferences.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/DIALOGS/preferences.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/exportGeometryDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/exportGeometryDialog.C.o -c /<>/source/VIEW/DIALOGS/exportGeometryDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h:9, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/exportGeometryDialog.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/PTEDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/PTEDialog.C.o -c /<>/source/VIEW/DIALOGS/PTEDialog.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/PTEDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pubchemDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/pubchemDialog.C.o -c /<>/source/VIEW/DIALOGS/pubchemDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/VIEW/DIALOGS/pubchemDialog.h:17, from /<>/source/VIEW/DIALOGS/pubchemDialog.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C.o -c /<>/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.C [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setCamera.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setCamera.C.o -c /<>/source/VIEW/DIALOGS/setCamera.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setCamera.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setCamera.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setCamera.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/setCamera.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setClippingPlane.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/setClippingPlane.C.o -c /<>/source/VIEW/DIALOGS/setClippingPlane.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/clippingPlane.h:15, from /<>/include/BALL/VIEW/DIALOGS/setClippingPlane.h:13, from /<>/source/VIEW/DIALOGS/setClippingPlane.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/serverPreferences.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/serverPreferences.C.o -c /<>/source/VIEW/DIALOGS/serverPreferences.C [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/shortcutDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/shortcutDialog.C.o -c /<>/source/VIEW/DIALOGS/shortcutDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5, from /<>/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24, from /<>/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5, from /<>/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24, from /<>/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/shortcutTableView.h:5, from /<>/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h:24, from /<>/include/BALL/VIEW/DIALOGS/shortcutDialog.h:20, from /<>/source/VIEW/DIALOGS/shortcutDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/snapShotVisualisation.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/snapShotVisualisation.C.o -c /<>/source/VIEW/DIALOGS/snapShotVisualisation.C In file included from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:2: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:2: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/snapShotVisualisation.C:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stageSettings.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stageSettings.C.o -c /<>/source/VIEW/DIALOGS/stageSettings.C In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stageSettings.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:17, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stageSettings.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:17, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stageSettings.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/DIALOGS/stageSettings.h:17, from /<>/source/VIEW/DIALOGS/stageSettings.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/DIALOGS/stageSettings.C: In member function ‘void BALL::VIEW::StageSettings::stereoScreenChanged(int)’: /<>/source/VIEW/DIALOGS/stageSettings.C:378:47: warning: unused parameter ‘new_screen’ [-Wunused-parameter] 378 | void StageSettings::stereoScreenChanged(int new_screen) | ~~~~^~~~~~~~~~ /<>/source/VIEW/DIALOGS/stageSettings.C: In member function ‘void BALL::VIEW::StageSettings::stereoModeChanged()’: /<>/source/VIEW/DIALOGS/stageSettings.C:433:20: warning: unused variable ‘desktop’ [-Wunused-variable] 433 | QDesktopWidget* desktop = QApplication::desktop(); | ^~~~~~~ /<>/source/VIEW/DIALOGS/stageSettings.C: In member function ‘void BALL::VIEW::StageSettings::screenCountChanged(int)’: /<>/source/VIEW/DIALOGS/stageSettings.C:600:8: warning: unused variable ‘old_control’ [-Wunused-variable] 600 | int old_control = controlScreen_comboBox->currentIndex(); | ^~~~~~~~~~~ /<>/source/VIEW/DIALOGS/stageSettings.C:601:8: warning: unused variable ‘old_left’ [-Wunused-variable] 601 | int old_left = leftEyeScreen_comboBox->currentIndex(); | ^~~~~~~~ /<>/source/VIEW/DIALOGS/stageSettings.C:602:8: warning: unused variable ‘old_right’ [-Wunused-variable] 602 | int old_right = rightEyeScreen_comboBox->currentIndex(); | ^~~~~~~~~ [ 78%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stereoSettingsDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/stereoSettingsDialog.C.o -c /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DIALOGS/stereoSettingsDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/undoManagerDialog.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/undoManagerDialog.C.o -c /<>/source/VIEW/DIALOGS/undoManagerDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/include/BALL/VIEW/DIALOGS/undoManagerDialog.h:17, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DIALOGS/undoManagerDialog.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorExtensions.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorExtensions.C.o -c /<>/source/VIEW/DATATYPE/colorExtensions.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorHSV.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorHSV.C.o -c /<>/source/VIEW/DATATYPE/colorHSV.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorRGBA.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorRGBA.C.o -c /<>/source/VIEW/DATATYPE/colorRGBA.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorMap.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorMap.C.o -c /<>/source/VIEW/DATATYPE/colorMap.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnit.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnit.C.o -c /<>/source/VIEW/DATATYPE/colorUnit.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnitHue.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/colorUnitHue.C.o -c /<>/source/VIEW/DATATYPE/colorUnitHue.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex1.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex1.C.o -c /<>/source/VIEW/DATATYPE/vertex1.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex2.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/vertex2.C.o -c /<>/source/VIEW/DATATYPE/vertex2.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/dataset.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/dataset.C.o -c /<>/source/VIEW/DATATYPE/dataset.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/dataset.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/DATATYPE/dataset.C:9: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/DATATYPE/dataset.C:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/raytraceableGrid.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/raytraceableGrid.C.o -c /<>/source/VIEW/DATATYPE/raytraceableGrid.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/standardDatasets.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/DATATYPE/standardDatasets.C.o -c /<>/source/VIEW/DATATYPE/standardDatasets.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/standardDatasets.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/source/VIEW/DATATYPE/standardDatasets.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/standardDatasets.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/source/VIEW/DATATYPE/standardDatasets.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/DATATYPE/standardDatasets.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/source/VIEW/DATATYPE/standardDatasets.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/DATATYPE/standardDatasets.C:10: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/DATATYPE/standardDatasets.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/editMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/editMode.C.o -c /<>/source/VIEW/KERNEL/MODES/editMode.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/source/VIEW/KERNEL/MODES/editMode.C:18: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/VIEW/KERNEL/MODES/editMode.C:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/source/VIEW/KERNEL/MODES/editMode.C:18: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/VIEW/KERNEL/MODES/editMode.C:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/source/VIEW/KERNEL/MODES/editMode.C:18: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/VIEW/KERNEL/MODES/editMode.C:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/KERNEL/MODES/editMode.C:24: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/editMode.C:22: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionMode.C.o -c /<>/source/VIEW/KERNEL/MODES/interactionMode.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionMode.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionModeManager.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/interactionModeManager.C.o -c /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/interactionModeManager.C:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/moveMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/moveMode.C.o -c /<>/source/VIEW/KERNEL/MODES/moveMode.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/KERNEL/MODES/moveMode.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/moveMode.C:5: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/pickingMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/pickingMode.C.o -c /<>/source/VIEW/KERNEL/MODES/pickingMode.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/pickingMode.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/rotateMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/MODES/rotateMode.C.o -c /<>/source/VIEW/KERNEL/MODES/rotateMode.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/KERNEL/MODES/rotateMode.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/clippingPlane.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/clippingPlane.C.o -c /<>/source/VIEW/KERNEL/clippingPlane.C [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/common.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/common.C.o -c /<>/source/VIEW/KERNEL/common.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/common.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/KERNEL/common.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/common.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/KERNEL/common.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/common.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/KERNEL/common.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/common.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/common.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/common.C:8: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/compositeManager.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/compositeManager.C.o -c /<>/source/VIEW/KERNEL/compositeManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/KERNEL/compositeManager.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/source/VIEW/KERNEL/compositeManager.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/KERNEL/compositeManager.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/source/VIEW/KERNEL/compositeManager.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/KERNEL/compositeManager.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/source/VIEW/KERNEL/compositeManager.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/connectionObject.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/connectionObject.C.o -c /<>/source/VIEW/KERNEL/connectionObject.C In file included from /<>/source/VIEW/KERNEL/connectionObject.C:6: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/connectionObject.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 81%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/editOperation.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/editOperation.C.o -c /<>/source/VIEW/KERNEL/editOperation.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/geometricObject.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/geometricObject.C.o -c /<>/source/VIEW/KERNEL/geometricObject.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/iconLoader.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/iconLoader.C.o -c /<>/source/VIEW/KERNEL/iconLoader.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/mainControl.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/mainControl.C.o -c /<>/source/VIEW/KERNEL/mainControl.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/mainControl.C:15: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:15: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/KERNEL/mainControl.C:33: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:34: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/KERNEL/mainControl.C:42: /<>/source/VIEW/KERNEL/mainControl.C: In member function ‘void BALL::VIEW::MainControl::selectCompositeRecursive(BALL::Composite*, bool)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/KERNEL/mainControl.C:1334:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1334 | BALL_FOREACH_ATOM_BOND(*atom, bi) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/mainControl.C:42: /<>/source/VIEW/KERNEL/mainControl.C: In member function ‘void BALL::VIEW::MainControl::selectCompositeRecursive(BALL::Composite*, bool)’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/KERNEL/mainControl.C:1334:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1334 | BALL_FOREACH_ATOM_BOND(*atom, bi) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/KERNEL/mainControl.C: In member function ‘void BALL::VIEW::MainControl::deselectCompositeRecursive(BALL::Composite*, bool)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/KERNEL/mainControl.C:1405:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1405 | BALL_FOREACH_ATOM_BOND(*atom, bi) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/mainControl.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/KERNEL/mainControl.C: In member function ‘void BALL::VIEW::MainControl::loadBALLViewProjectFile(const BALL::String&)’: /<>/source/VIEW/KERNEL/mainControl.C:2066:46: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 2066 | stage = *Scene::getInstance(0)->getStage(); | ^ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/mainControl.C:15: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/message.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/message.C.o -c /<>/source/VIEW/KERNEL/message.C In file included from /<>/source/VIEW/KERNEL/message.C:5: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/message.C:5: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modelInformation.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modelInformation.C.o -c /<>/source/VIEW/KERNEL/modelInformation.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modularWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/modularWidget.C.o -c /<>/source/VIEW/KERNEL/modularWidget.C In file included from /<>/source/VIEW/KERNEL/modularWidget.C:6: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/modularWidget.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/modularWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/modularWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/modularWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/modularWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/modularWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/modularWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/preferencesEntry.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/preferencesEntry.C.o -c /<>/source/VIEW/KERNEL/preferencesEntry.C In file included from /<>/source/VIEW/KERNEL/preferencesEntry.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/preferencesEntry.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/preferencesEntry.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/preferencesEntry.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/preferencesEntry.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/preferencesEntry.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/preferencesEntry.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/preferencesEntry.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representationManager.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representationManager.C.o -c /<>/source/VIEW/KERNEL/representationManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representationManager.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/source/VIEW/KERNEL/representationManager.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representationManager.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/source/VIEW/KERNEL/representationManager.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representationManager.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/source/VIEW/KERNEL/representationManager.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/representationManager.C:9: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/representationManager.C:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representation.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/representation.C.o -c /<>/source/VIEW/KERNEL/representation.C In file included from /<>/source/VIEW/KERNEL/representation.C:9: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/representation.C:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representation.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/source/VIEW/KERNEL/representation.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representation.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/source/VIEW/KERNEL/representation.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/representation.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/source/VIEW/KERNEL/representation.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/serverWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/serverWidget.C.o -c /<>/source/VIEW/KERNEL/serverWidget.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/serverWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/VIEW/KERNEL/serverWidget.h:21, from /<>/source/VIEW/KERNEL/serverWidget.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/serverWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/VIEW/KERNEL/serverWidget.h:21, from /<>/source/VIEW/KERNEL/serverWidget.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/serverWidget.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/VIEW/KERNEL/serverWidget.h:21, from /<>/source/VIEW/KERNEL/serverWidget.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/serverWidget.C:10: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/serverWidget.C:10: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/shortcutRegistry.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/shortcutRegistry.C.o -c /<>/source/VIEW/KERNEL/shortcutRegistry.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/snapshotManagerInterface.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/snapshotManagerInterface.C.o -c /<>/source/VIEW/KERNEL/snapshotManagerInterface.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h:4, from /<>/source/VIEW/KERNEL/snapshotManagerInterface.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/stage.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/stage.C.o -c /<>/source/VIEW/KERNEL/stage.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/threads.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/threads.C.o -c /<>/source/VIEW/KERNEL/threads.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/threads.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/KERNEL/threads.h:5, from /<>/source/VIEW/KERNEL/threads.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/threads.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/KERNEL/threads.h:5, from /<>/source/VIEW/KERNEL/threads.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/KERNEL/threads.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/KERNEL/threads.h:5, from /<>/source/VIEW/KERNEL/threads.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/KERNEL/threads.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/KERNEL/threads.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/KERNEL/UIOperationMode.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/KERNEL/UIOperationMode.C.o -c /<>/source/VIEW/KERNEL/UIOperationMode.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/atomBondModelBaseProcessor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/atomBondModelBaseProcessor.C.o -c /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:8: /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function ‘void BALL::VIEW::AtomBondModelBaseProcessor::buildBondModels_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:96:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 96 | BALL_FOREACH_ATOM_BOND(**atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:8: /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function ‘void BALL::VIEW::AtomBondModelBaseProcessor::buildBondModels_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:96:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 96 | BALL_FOREACH_ATOM_BOND(**atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::VIEW::AtomBondModelBaseProcessor::operator()(BALL::Composite&)’: /<>/source/VIEW/MODELS/atomBondModelBaseProcessor.C:160:39: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 160 | catch (Exception::GeneralException e) | ^ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/backboneModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/backboneModel.C.o -c /<>/source/VIEW/MODELS/backboneModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/backboneModel.C:11: /<>/source/VIEW/MODELS/backboneModel.C: In member function ‘virtual bool BALL::VIEW::AddBackboneModel::collectPositions(std::vector)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/backboneModel.C:133:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 133 | BALL_FOREACH_ATOM(residue, it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/backboneModel.C:11: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/backboneModel.C:217:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 217 | BALL_FOREACH_ATOM(residue, it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/source/VIEW/MODELS/backboneModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/ballAndStickModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/ballAndStickModel.C.o -c /<>/source/VIEW/MODELS/ballAndStickModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/ballAndStickModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/ballAndStickModel.h:11, from /<>/source/VIEW/MODELS/ballAndStickModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/ballAndStickModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/ballAndStickModel.h:11, from /<>/source/VIEW/MODELS/ballAndStickModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/ballAndStickModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/ballAndStickModel.h:11, from /<>/source/VIEW/MODELS/ballAndStickModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/ballAndStickModel.C:10: /<>/source/VIEW/MODELS/ballAndStickModel.C: In member function ‘void BALL::VIEW::AddBallAndStickModel::collectRingBonds_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/MODELS/ballAndStickModel.C:457:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 457 | BALL_FOREACH_ATOM_BOND(**atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/VIEW/MODELS/ballAndStickModel.h:15, from /<>/source/VIEW/MODELS/ballAndStickModel.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/ballAndStickModel.h:11, from /<>/source/VIEW/MODELS/ballAndStickModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/ballAndStickModel.C:10: /<>/source/VIEW/MODELS/ballAndStickModel.C: In member function ‘void BALL::VIEW::AddBallAndStickModel::collectRingBonds_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/VIEW/MODELS/ballAndStickModel.C:457:5: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 457 | BALL_FOREACH_ATOM_BOND(**atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/cartoonModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/cartoonModel.C.o -c /<>/source/VIEW/MODELS/cartoonModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/cartoonModel.C:18: /<>/source/VIEW/MODELS/cartoonModel.C: In member function ‘bool BALL::VIEW::AddCartoonModel::assignNucleotideAtoms_(BALL::Residue&, BALL::Size, BALL::String*, BALL::Atom**)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/cartoonModel.C:937:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 937 | BALL_FOREACH_ATOM(r, it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/cartoonModel.C:18: /<>/source/VIEW/MODELS/cartoonModel.C: In member function ‘bool BALL::VIEW::AddCartoonModel::assignNucleotideAtoms_(BALL::Residue&, BALL::Size, BALL::String*, BALL::Atom**)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/cartoonModel.C:937:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 937 | BALL_FOREACH_ATOM(r, it) | ^~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/cartoonModel.C: In member function ‘void BALL::VIEW::AddCartoonModel::createSimpleNucleicAcid_(BALL::Position, BALL::Position)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/cartoonModel.C:1045:4: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1045 | BALL_FOREACH_ATOM(*res, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/cartoonModel.C:18: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/cartoonModel.C:1082:3: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1082 | BALL_FOREACH_ATOM(*partner, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/source/VIEW/MODELS/cartoonModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorByGridProcessor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorByGridProcessor.C.o -c /<>/source/VIEW/MODELS/colorByGridProcessor.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorProcessor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/colorProcessor.C.o -c /<>/source/VIEW/MODELS/colorProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/colorProcessor.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/source/VIEW/MODELS/colorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/colorProcessor.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/source/VIEW/MODELS/colorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/colorProcessor.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/source/VIEW/MODELS/colorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/colorProcessor.C:12: /<>/source/VIEW/MODELS/colorProcessor.C: In member function ‘virtual void BALL::VIEW::ColorProcessor::createAtomGrid(const BALL::Composite*)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/colorProcessor.C:227:7: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 227 | BALL_FOREACH_ATOM(*acont, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/source/VIEW/MODELS/colorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/colorProcessor.C:12: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/colorProcessor.C:246:6: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 246 | BALL_FOREACH_ATOM(*acont, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/source/VIEW/MODELS/colorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/fieldLineCreator.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/fieldLineCreator.C.o -c /<>/source/VIEW/MODELS/fieldLineCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/fieldLineCreator.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/source/VIEW/MODELS/fieldLineCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/fieldLineCreator.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/source/VIEW/MODELS/fieldLineCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/fieldLineCreator.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/MODELS/fieldLineCreator.h:11, from /<>/source/VIEW/MODELS/fieldLineCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/fieldLineCreator.C: In member function ‘void BALL::VIEW::FieldLineCreator::calculateLinePoints_(BALL::Vector3, std::vector >&, float)’: /<>/source/VIEW/MODELS/fieldLineCreator.C:289:47: warning: variable ‘size’ set but not used [-Wunused-but-set-variable] 289 | TRegularData3D::IndexType size = vector_grid_->getSize(); | ^~~~ [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/forceModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/forceModel.C.o -c /<>/source/VIEW/MODELS/forceModel.C [ 84%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/HBondModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/HBondModel.C.o -c /<>/source/VIEW/MODELS/HBondModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/HBondModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/HBondModel.h:11, from /<>/source/VIEW/MODELS/HBondModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/HBondModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/HBondModel.h:11, from /<>/source/VIEW/MODELS/HBondModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/HBondModel.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/HBondModel.h:11, from /<>/source/VIEW/MODELS/HBondModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/labelModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/labelModel.C.o -c /<>/source/VIEW/MODELS/labelModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/labelModel.h:9, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/labelModel.h:9, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/include/BALL/VIEW/MODELS/labelModel.h:17, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/labelModel.h:9, from /<>/source/VIEW/MODELS/labelModel.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/lineModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/lineModel.C.o -c /<>/source/VIEW/MODELS/lineModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/lineModel.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/lineModel.h:11, from /<>/source/VIEW/MODELS/lineModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/lineModel.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/lineModel.h:11, from /<>/source/VIEW/MODELS/lineModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/VIEW/MODELS/lineModel.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/lineModel.h:11, from /<>/source/VIEW/MODELS/lineModel.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/modelProcessor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/modelProcessor.C.o -c /<>/source/VIEW/MODELS/modelProcessor.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/standardColorProcessor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/standardColorProcessor.C.o -c /<>/source/VIEW/MODELS/standardColorProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:19, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/standardColorProcessor.C: In member function ‘virtual bool BALL::VIEW::ResidueNumberColorProcessor::start()’: /<>/source/VIEW/MODELS/standardColorProcessor.C:328:25: warning: implicitly-declared ‘BALL::VIEW::ColorMap& BALL::VIEW::ColorMap::operator=(const BALL::VIEW::ColorMap&)’ is deprecated [-Wdeprecated-copy] 328 | table_ = ColorMap(500); | ^ In file included from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:15, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/VIEW/DATATYPE/colorMap.h:54:4: note: because ‘BALL::VIEW::ColorMap’ has user-provided ‘BALL::VIEW::ColorMap::ColorMap(const BALL::VIEW::ColorMap&)’ 54 | ColorMap(const ColorMap& color_Map); | ^~~~~~~~ /<>/source/VIEW/MODELS/standardColorProcessor.C:343:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 343 | res_it = ((System*)*it)->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/standardColorProcessor.C: In member function ‘virtual bool BALL::VIEW::ResidueNumberColorProcessor::start()’: /<>/source/VIEW/MODELS/standardColorProcessor.C:343:44: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 343 | res_it = ((System*)*it)->beginResidue(); | ^ /<>/source/VIEW/MODELS/standardColorProcessor.C:347:45: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 347 | res_it = ((Protein*)*it)->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/standardColorProcessor.C:351:43: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 351 | res_it = ((Chain*)*it)->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/MODELS/standardColorProcessor.C:355:56: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 355 | res_it = ((SecondaryStructure*)*it)->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/standardColorProcessor.C:16: /<>/source/VIEW/MODELS/standardColorProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::VIEW::AtomDistanceColorProcessor::operator()(BALL::VIEW::GeometricObject*&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/standardColorProcessor.C:666:7: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 666 | BALL_FOREACH_ATOM(*acont, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/MODELS/colorProcessor.h:15, from /<>/include/BALL/VIEW/MODELS/standardColorProcessor.h:11, from /<>/source/VIEW/MODELS/standardColorProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/standardColorProcessor.C:16: /<>/source/VIEW/MODELS/standardColorProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::VIEW::AtomDistanceColorProcessor::operator()(BALL::VIEW::GeometricObject*&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/standardColorProcessor.C:666:7: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 666 | BALL_FOREACH_ATOM(*acont, ait) | ^~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/surfaceModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/surfaceModel.C.o -c /<>/source/VIEW/MODELS/surfaceModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/surfaceModel.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/surfaceModel.h:11, from /<>/source/VIEW/MODELS/surfaceModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/surfaceModel.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/surfaceModel.h:11, from /<>/source/VIEW/MODELS/surfaceModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/MODELS/surfaceModel.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/surfaceModel.h:11, from /<>/source/VIEW/MODELS/surfaceModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/surfaceModel.C:11: /<>/source/VIEW/MODELS/surfaceModel.C: In member function ‘virtual BALL::Processor::Result BALL::VIEW::AddSurfaceModel::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/surfaceModel.C:54:5: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 54 | BALL_FOREACH_ATOM(*(AtomContainer*) &composite, it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/surfaceModel.h:11, from /<>/source/VIEW/MODELS/surfaceModel.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/MODELS/surfaceModel.C:11: /<>/source/VIEW/MODELS/surfaceModel.C: In member function ‘virtual BALL::Processor::Result BALL::VIEW::AddSurfaceModel::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/MODELS/surfaceModel.C:54:5: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 54 | BALL_FOREACH_ATOM(*(AtomContainer*) &composite, it) | ^~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/MODELS/vanDerWaalsModel.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/MODELS/vanDerWaalsModel.C.o -c /<>/source/VIEW/MODELS/vanDerWaalsModel.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/box.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/box.C.o -c /<>/source/VIEW/PRIMITIVES/box.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/disc.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/disc.C.o -c /<>/source/VIEW/PRIMITIVES/disc.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/gridVisualisation.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/gridVisualisation.C.o -c /<>/source/VIEW/PRIMITIVES/gridVisualisation.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/label.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/label.C.o -c /<>/source/VIEW/PRIMITIVES/label.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/PRIMITIVES/label.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/PRIMITIVES/label.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/VIEW/DATATYPE/colorRGBA.h:13, from /<>/include/BALL/VIEW/KERNEL/geometricObject.h:11, from /<>/include/BALL/VIEW/PRIMITIVES/label.h:9, from /<>/source/VIEW/PRIMITIVES/label.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/line.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/line.C.o -c /<>/source/VIEW/PRIMITIVES/line.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/mesh.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK 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-pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/mesh.C.o -c /<>/source/VIEW/PRIMITIVES/mesh.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/multiLine.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/multiLine.C.o -c /<>/source/VIEW/PRIMITIVES/multiLine.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/quadMesh.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/quadMesh.C.o -c /<>/source/VIEW/PRIMITIVES/quadMesh.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/point.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/point.C.o -c /<>/source/VIEW/PRIMITIVES/point.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/simpleBox.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/simpleBox.C.o -c /<>/source/VIEW/PRIMITIVES/simpleBox.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/sphere.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/sphere.C.o -c /<>/source/VIEW/PRIMITIVES/sphere.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/tube.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/tube.C.o -c /<>/source/VIEW/PRIMITIVES/tube.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredLine.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredLine.C.o -c /<>/source/VIEW/PRIMITIVES/twoColoredLine.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredTube.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PRIMITIVES/twoColoredTube.C.o -c /<>/source/VIEW/PRIMITIVES/twoColoredTube.C [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/glRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/glRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/glRenderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/renderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/renderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/renderer.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function ‘virtual void BALL::VIEW::Renderer::setupEnvironmentMap(const QImage&)’: /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:165:52: warning: unused parameter ‘image’ [-Wunused-parameter] 165 | void Renderer::setupEnvironmentMap(const QImage& image) | ~~~~~~~~~~~~~~^~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function ‘virtual void BALL::VIEW::Renderer::pickObjects(BALL::Position, BALL::Position, BALL::Position, BALL::Position, std::__cxx11::list&)’: /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:253:39: warning: unused parameter ‘x1’ [-Wunused-parameter] 253 | void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2, | ~~~~~~~~~^~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:253:52: warning: unused parameter ‘y1’ [-Wunused-parameter] 253 | void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2, | ~~~~~~~~~^~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:253:65: warning: unused parameter ‘x2’ [-Wunused-parameter] 253 | void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2, | ~~~~~~~~~^~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:253:78: warning: unused parameter ‘y2’ [-Wunused-parameter] 253 | void Renderer::pickObjects(Position x1, Position y1, Position x2, Position y2, | ~~~~~~~~~^~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:254:58: warning: unused parameter ‘objects’ [-Wunused-parameter] 254 | std::list& objects) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C: In member function ‘virtual void BALL::VIEW::Renderer::getFrustum(float&, float&, float&, float&, float&, float&)’: /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:36: warning: unused parameter ‘near_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:51: warning: unused parameter ‘far_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:65: warning: unused parameter ‘left_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:80: warning: unused parameter ‘right_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:96: warning: unused parameter ‘top_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~ /<>/source/VIEW/RENDERING/RENDERERS/renderer.C:259:110: warning: unused parameter ‘bottom_f’ [-Wunused-parameter] 259 | void Renderer::getFrustum(float& near_f, float& far_f, float& left_f, float& right_f, float& top_f, float& bottom_f) | ~~~~~~~^~~~~~~~ [ 87%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/POVRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/POVRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/POVRenderer.h:11, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/POVRenderer.C:12: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/STLRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/STLRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/STLRenderer.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/tilingRenderer.h:13, from /<>/source/VIEW/RENDERING/RENDERERS/tilingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/VRMLRenderer.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/bufferedRenderer.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/raytracingRenderer.h:17, from /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C: In member function ‘virtual BALL::VIEW::Resolution BALL::VIEW::RaytracingRenderer::getSupportedResolution(const BALL::VIEW::Resolution&, const BALL::VIEW::Resolution&, const BALL::VIEW::PixelFormat&) const’: /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:18:22: warning: unused parameter ‘min’ [-Wunused-parameter] 18 | const Resolution &min, const Resolution &max, | ~~~~~~~~~~~~~~~~~~^~~ /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C: In member function ‘virtual std::vector BALL::VIEW::RaytracingRenderer::intersectRaysWithGeometry(const std::vector >&, const std::vector >&)’: /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:33:96: warning: unused parameter ‘origins’ [-Wunused-parameter] 33 | std::vector RaytracingRenderer::intersectRaysWithGeometry(const std::vector& origins, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /<>/source/VIEW/RENDERING/RENDERERS/raytracingRenderer.C:34:96: warning: unused parameter ‘directions’ [-Wunused-parameter] 34 | const std::vector& directions) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C.o -c /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/XML3DRenderer.h:9, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/RENDERING/RENDERERS/XML3DRenderer.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/camera.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/camera.C.o -c /<>/source/VIEW/RENDERING/camera.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glDisplayList.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glDisplayList.C.o -c /<>/source/VIEW/RENDERING/glDisplayList.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderSetup.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderSetup.C.o -c /<>/source/VIEW/RENDERING/renderSetup.C In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13, from /<>/source/VIEW/RENDERING/renderSetup.C:1: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/RENDERING/renderSetup.C: In copy constructor ‘BALL::VIEW::RenderSetup::RenderSetup(const BALL::VIEW::RenderSetup&)’: /<>/source/VIEW/RENDERING/renderSetup.C:55:3: warning: base class ‘class boost::enable_shared_from_this’ should be explicitly initialized in the copy constructor [-Wextra] 55 | RenderSetup::RenderSetup(const RenderSetup& rs) | ^~~~~~~~~~~ /<>/source/VIEW/RENDERING/renderSetup.C: In member function ‘bool BALL::VIEW::RenderSetup::exportPNG(const BALL::String&)’: /<>/source/VIEW/RENDERING/renderSetup.C:445:11: warning: unused variable ‘line_width’ [-Wunused-variable] 445 | Size line_width = width*3; | ^~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/vertexBuffer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/vertexBuffer.C.o -c /<>/source/VIEW/RENDERING/vertexBuffer.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glRenderWindow.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glRenderWindow.C.o -c /<>/source/VIEW/RENDERING/glRenderWindow.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glRenderWindow.h:17, from /<>/source/VIEW/RENDERING/glRenderWindow.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/glRenderWindow.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/RENDERING/glRenderWindow.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/glRenderWindow.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/RENDERING/glRenderWindow.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/RENDERING/glRenderWindow.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/source/VIEW/RENDERING/glRenderWindow.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glOffscreenTarget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/glOffscreenTarget.C.o -c /<>/source/VIEW/RENDERING/glOffscreenTarget.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/RENDERING/glOffscreenTarget.h:13, from /<>/source/VIEW/RENDERING/glOffscreenTarget.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderWindow.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/renderWindow.C.o -c /<>/source/VIEW/RENDERING/renderWindow.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/RENDERING/renderWindow.C: In instantiation of ‘BALL::VIEW::TRenderWindow::TRenderWindow() [with taPixelDatatype = char]’: /<>/source/VIEW/RENDERING/renderWindow.C:102:18: required from here /<>/source/VIEW/RENDERING/renderWindow.C:20:24: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 20 | do_not_resize_(false) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/source/VIEW/RENDERING/renderWindow.C: In instantiation of ‘BALL::VIEW::TRenderWindow::TRenderWindow() [with taPixelDatatype = float]’: /<>/source/VIEW/RENDERING/renderWindow.C:103:18: required from here /<>/source/VIEW/RENDERING/renderWindow.C:20:24: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 20 | do_not_resize_(false) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/source/VIEW/RENDERING/renderWindow.C:9: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/RENDERING/pixelFormat.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/RENDERING/pixelFormat.C.o -c /<>/source/VIEW/RENDERING/pixelFormat.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorButton.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorButton.C.o -c /<>/source/VIEW/WIDGETS/colorButton.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorTable.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/colorTable.C.o -c /<>/source/VIEW/WIDGETS/colorTable.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/datasetControl.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/datasetControl.C.o -c /<>/source/VIEW/WIDGETS/datasetControl.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/datasetControl.h:11, from /<>/source/VIEW/WIDGETS/datasetControl.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/datasetControl.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/datasetControl.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockingController.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockingController.C.o -c /<>/source/VIEW/WIDGETS/dockingController.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/radiusRuleProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/dockDialog.h:18, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:15, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/dockingController.C:6: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/dockingController.h:11, from /<>/source/VIEW/WIDGETS/dockingController.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/dockingController.C:13: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/dockingController.C:13: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ /<>/source/VIEW/WIDGETS/dockingController.C: In member function ‘virtual void BALL::VIEW::DockingController::initializeWidget(BALL::VIEW::MainControl&)’: /<>/source/VIEW/WIDGETS/dockingController.C:146:57: warning: unused parameter ‘main_control’ [-Wunused-parameter] 146 | void DockingController::initializeWidget(MainControl& main_control) | ~~~~~~~~~~~~~^~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/dockWidget.C.o -c /<>/source/VIEW/WIDGETS/dockWidget.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/dockWidget.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/dockWidget.C:7: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/dockWidget.C:7: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/fileObserver.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/fileObserver.C.o -c /<>/source/VIEW/WIDGETS/fileObserver.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/fileObserver.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/fileObserver.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/fileObserver.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/fileObserver.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/fileObserver.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/fileObserver.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/genericControl.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/genericControl.C.o -c /<>/source/VIEW/WIDGETS/genericControl.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/genericControl.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/genericControl.C:9: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/genericControl.C:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/geometricControl.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/geometricControl.C.o -c /<>/source/VIEW/WIDGETS/geometricControl.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/geometricControl.C:12: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/geometricControl.C:11: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/geometricControl.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/geometricControl.h:17, from /<>/source/VIEW/WIDGETS/geometricControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/geometricControl.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/geometricControl.h:17, from /<>/source/VIEW/WIDGETS/geometricControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/geometricControl.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/WIDGETS/geometricControl.h:17, from /<>/source/VIEW/WIDGETS/geometricControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/gridColorWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/gridColorWidget.C.o -c /<>/source/VIEW/WIDGETS/gridColorWidget.C [ 90%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/helpViewer.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/helpViewer.C.o -c /<>/source/VIEW/WIDGETS/helpViewer.C In file included from /<>/source/VIEW/WIDGETS/helpViewer.C:6: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/helpViewer.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/helpViewer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/helpViewer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/helpViewer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/helpViewer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/helpViewer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/stage.h:9, from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/helpViewer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/logView.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/logView.C.o -c /<>/source/VIEW/WIDGETS/logView.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/WIDGETS/logView.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/logView.C:13: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/source/VIEW/WIDGETS/logView.C:13: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularControl.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularControl.C.o -c /<>/source/VIEW/WIDGETS/molecularControl.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/molecularControl.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularControl.h:13, from /<>/source/VIEW/WIDGETS/molecularControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/molecularControl.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularControl.h:13, from /<>/source/VIEW/WIDGETS/molecularControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/molecularControl.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularControl.h:13, from /<>/source/VIEW/WIDGETS/molecularControl.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/molecularControl.C:13: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/molecularControl.C:11: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularStructure.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/molecularStructure.C.o -c /<>/source/VIEW/WIDGETS/molecularStructure.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:9, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/molecularStructure.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ /<>/source/VIEW/WIDGETS/molecularStructure.C: In member function ‘virtual void BALL::VIEW::MolecularStructure::calculateRMSD()’: /<>/source/VIEW/WIDGETS/molecularStructure.C:979:24: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 979 | ait = a2->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/WIDGETS/molecularStructure.C: In member function ‘virtual void BALL::VIEW::MolecularStructure::calculateRMSD()’: /<>/source/VIEW/WIDGETS/molecularStructure.C:979:24: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 979 | ait = a2->beginAtom(); | ^ In file included from /<>/source/VIEW/WIDGETS/molecularStructure.C:27: /<>/source/VIEW/WIDGETS/molecularStructure.C: In member function ‘void BALL::VIEW::MolecularStructure::calculateHBonds()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1206 | BALL_FOREACH_BOND(*system, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/molecularStructure.C:27: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1206 | BALL_FOREACH_BOND(*system, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:13, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/molecularStructure.C:5: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/molecularStructure.C:27: /<>/source/VIEW/WIDGETS/molecularStructure.C: In member function ‘void BALL::VIEW::MolecularStructure::calculateHBonds()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/VIEW/WIDGETS/molecularStructure.C:1206:4: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1206 | BALL_FOREACH_BOND(*system, ait, bit) | ^~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/propertyEditor.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/propertyEditor.C.o -c /<>/source/VIEW/WIDGETS/propertyEditor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/include/BALL/VIEW/WIDGETS/propertyEditor.h:17, from /<>/source/VIEW/WIDGETS/propertyEditor.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/scene.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/scene.C.o -c /<>/source/VIEW/WIDGETS/scene.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h:14, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:37, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:9, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/VIEW/WIDGETS/scene.C:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:9, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/VIEW/WIDGETS/scene.C:13: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/VIEW/WIDGETS/scene.C:10: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ /<>/source/VIEW/WIDGETS/scene.C: In member function ‘void BALL::VIEW::Scene::switchRenderer(BALL::VIEW::RenderSetup::RendererType)’: /<>/source/VIEW/WIDGETS/scene.C:2429:26: warning: comparison of integer expressions of different signedness: ‘BALL::Index’ {aka ‘int’} and ‘BALL::Position’ {aka ‘unsigned int’} [-Wsign-compare] 2429 | if (stereo_left_eye_ > main_renderer_) stereo_left_eye_--; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /<>/source/VIEW/WIDGETS/scene.C:2430:26: warning: comparison of integer expressions of different signedness: ‘BALL::Index’ {aka ‘int’} and ‘BALL::Position’ {aka ‘unsigned int’} [-Wsign-compare] 2430 | if (stereo_right_eye_ > main_renderer_) stereo_right_eye_--; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/shortcutTableView.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/shortcutTableView.C.o -c /<>/source/VIEW/WIDGETS/shortcutTableView.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/WIDGETS/shortcutTableView.C:15: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/SDWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/SDWidget.C.o -c /<>/source/VIEW/WIDGETS/SDWidget.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:12, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/VIEW/WIDGETS/SDWidget.h:9, from /<>/source/VIEW/WIDGETS/SDWidget.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/testFramework.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/testFramework.C.o -c /<>/source/VIEW/WIDGETS/testFramework.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/testFramework.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/testFramework.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/testFramework.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/testFramework.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/WIDGETS/testFramework.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/VIEW/KERNEL/common.h:15, from /<>/include/BALL/VIEW/DIALOGS/molecularFileDialog.h:17, from /<>/source/VIEW/WIDGETS/testFramework.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/VIEW/WIDGETS/testFramework.C: In member function ‘virtual void BALL::VIEW::TestFramework::timeOut()’: /<>/source/VIEW/WIDGETS/testFramework.C:542:10: warning: variable ‘org_p’ set but not used [-Wunused-but-set-variable] 542 | QPoint org_p = local; | ^~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/textEditorWidget.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/WIDGETS/textEditorWidget.C.o -c /<>/source/VIEW/WIDGETS/textEditorWidget.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/deviceEvent.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/deviceEvent.C.o -c /<>/source/VIEW/INPUT/deviceEvent.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/transformationEvent6D.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/transformationEvent6D.C.o -c /<>/source/VIEW/INPUT/transformationEvent6D.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o -c /<>/source/VIEW/INPUT/headTrackingEvent.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o -c /<>/source/VIEW/INPUT/motionTrackingEvent.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o -c /<>/source/VIEW/INPUT/notificationEvent.C In file included from /<>/include/BALL/VIEW/INPUT/notificationEvent.h:6, from /<>/source/VIEW/INPUT/notificationEvent.C:1: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9, from /<>/include/BALL/VIEW/INPUT/notificationEvent.h:6, from /<>/source/VIEW/INPUT/notificationEvent.C:1: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o -c /<>/source/VIEW/INPUT/buttonEvent.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o -c /<>/source/VIEW/INPUT/inputDeviceDriver.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/INPUT/inputDeviceDriver.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o -c /<>/source/VIEW/PLUGIN/modularWidgetPlugin.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o -c /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/VIEW/PLUGIN/modularWidgetPluginHandler.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o -c /<>/source/VIEW/PLUGIN/VIEWPlugin.C [ 93%] Building CXX object CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o -c /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/VIEW/PLUGIN/inputDevPluginHandler.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [ 93%] Linking CXX shared library lib/libVIEW.so /usr/bin/cmake -E cmake_link_script CMakeFiles/VIEW.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libVIEW.so.1.5 -o lib/libVIEW.so.1.5 CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/assignBondOrderResultsDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/atomOverview.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/amberConfigurationDialog.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/bondProperties.C.o CMakeFiles/VIEW.dir/source/VIEW/DIALOGS/charmmConfigurationDialog.C.o 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CMakeFiles/VIEW.dir/source/VIEW/INPUT/headTrackingEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/motionTrackingEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/notificationEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/buttonEvent.C.o CMakeFiles/VIEW.dir/source/VIEW/INPUT/inputDeviceDriver.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPlugin.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/modularWidgetPluginHandler.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/VIEWPlugin.C.o CMakeFiles/VIEW.dir/source/VIEW/PLUGIN/inputDevPluginHandler.C.o -Wl,-rpath,/<>/build/lib: lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 -lGL -lGLU /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 /usr/bin/cmake -E cmake_symlink_library lib/libVIEW.so.1.5 lib/libVIEW.so.1.5 lib/libVIEW.so make[5]: Leaving directory '/<>/build' [100%] Built target VIEW make[4]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[3]: Leaving directory '/<>/build' make -f CMakeFiles/Makefile2 BALLView make[3]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 33 make -f CMakeFiles/Makefile2 source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/all make[4]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[5]: Entering directory '/<>/build' [ 0%] Automatic MOC for target BALL /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 3%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/BALL.dir/build'. make[5]: Leaving directory '/<>/build' [ 63%] Built target BALL make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target VIEW /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 72%] Built target VIEW_autogen make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/VIEW.dir/build'. make[5]: Leaving directory '/<>/build' [100%] Built target VIEW make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/BALLVIEW /<>/build /<>/build/source/APPLICATIONS/BALLVIEW /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BALLView_autogen make[5]: Leaving directory '/<>/build' make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target BALLView cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target BALLView_autogen make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/depend make[5]: Entering directory '/<>/build' [100%] Generating ui_demoTutorialDialog.h cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/lib/qt5/bin/uic -o /<>/build/source/APPLICATIONS/BALLVIEW/ui_demoTutorialDialog.h /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.ui [100%] Generating ui_aboutDialog.h cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/lib/qt5/bin/uic -o /<>/build/source/APPLICATIONS/BALLVIEW/ui_aboutDialog.h /<>/source/APPLICATIONS/BALLVIEW/aboutDialog.ui cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/BALLVIEW /<>/build /<>/build/source/APPLICATIONS/BALLVIEW /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/DependInfo.cmake --color= Scanning dependencies of target BALLView make[5]: Leaving directory '/<>/build' make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_demoTutorialDialog.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:2: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/../../../../../../source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/EWIEGA46WW/moc_mainframe.cpp:9, from /<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/mocs_compilation.cpp:3: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/demoTutorialDialog.C.o cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/demoTutorialDialog.C.o -c /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/include/BALL/VIEW/PRIMITIVES/mesh.h:11, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:14, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:8: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:6: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/modularWidget.h:9, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.h:10, from /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C: In member function ‘void BALL::VIEW::DemoTutorialDialog::nextStepDemo_()’: /<>/source/APPLICATIONS/BALLVIEW/demoTutorialDialog.C:595:33: warning: catching polymorphic type ‘class BALL::Exception::FileNotFound’ by value [-Wcatch-value=] 595 | catch(Exception::FileNotFound e) | ^ [100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/icons.C.o cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/icons.C.o -c /<>/source/APPLICATIONS/BALLVIEW/icons.C [100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/main.C.o cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/main.C.o -c /<>/source/APPLICATIONS/BALLVIEW/main.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/main.C:10: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ [100%] Building CXX object source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/mainframe.C.o cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/BALLVIEW/BALLView_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/BALLVIEW -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BALLView.dir/mainframe.C.o -c /<>/source/APPLICATIONS/BALLVIEW/mainframe.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:49, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/VIEW/KERNEL/representation.h:9, from /<>/include/BALL/VIEW/KERNEL/representationManager.h:10, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:38: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:30: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16, from /<>/include/BALL/VIEW/RENDERING/renderWindow.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:17: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/embeddable.h:9, from /<>/include/BALL/VIEW/KERNEL/mainControl.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:9, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:20: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:15: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/renderer.h:17, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:9, from /<>/include/BALL/VIEW/WIDGETS/scene.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.h:13, from /<>/source/APPLICATIONS/BALLVIEW/mainframe.C:5: /<>/include/BALL/VIEW/KERNEL/stage.h:301:4: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ [100%] Linking CXX executable ../../../bin/BALLView cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_link_script CMakeFiles/BALLView.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BALLView.dir/BALLView_autogen/mocs_compilation.cpp.o CMakeFiles/BALLView.dir/demoTutorialDialog.C.o CMakeFiles/BALLView.dir/icons.C.o CMakeFiles/BALLView.dir/main.C.o CMakeFiles/BALLView.dir/mainframe.C.o -o ../../../bin/BALLView -Wl,-rpath,/<>/build/lib: ../../../lib/libVIEW.so.1.5 -lpthread -lX11 -lGLEW ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [100%] Built target BALLView make[4]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[3]: Leaving directory '/<>/build' make -f CMakeFiles/Makefile2 build_tests make[3]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 86 make -f CMakeFiles/Makefile2 test/CMakeFiles/build_tests.dir/all make[4]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[5]: Entering directory '/<>/build' [ 0%] Automatic MOC for target BALL /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 1%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/BALL.dir/build'. make[5]: Leaving directory '/<>/build' [ 24%] Built target BALL make -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target UhligCavFreeEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 24%] Automatic MOC for target UhligCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 24%] Built target UhligCavFreeEnergyProcessor_test_autogen make -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target UhligCavFreeEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 24%] Building CXX object test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/UhligCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp [ 24%] Building CXX object test/CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/UhligCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o -c /<>/test/UhligCavFreeEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/test/UhligCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 24%] Linking CXX executable ../bin/TEST/UhligCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/UhligCavFreeEnergyProcessor_test.dir/UhligCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/UhligCavFreeEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 24%] Built target UhligCavFreeEnergyProcessor_test make -f test/CMakeFiles/Vector3_test_autogen.dir/build.make test/CMakeFiles/Vector3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Vector3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Vector3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Vector3_test_autogen.dir/build.make test/CMakeFiles/Vector3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 24%] Automatic MOC for target Vector3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Vector3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 24%] Built target Vector3_test_autogen make -f test/CMakeFiles/Vector3_test.dir/build.make test/CMakeFiles/Vector3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Vector3_test.dir/DependInfo.cmake --color= Scanning dependencies of target Vector3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Vector3_test.dir/build.make test/CMakeFiles/Vector3_test.dir/build make[5]: Entering directory '/<>/build' [ 24%] Building CXX object test/CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Vector3_test_autogen/mocs_compilation.cpp [ 24%] Building CXX object test/CMakeFiles/Vector3_test.dir/Vector3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector3_test.dir/Vector3_test.C.o -c /<>/test/Vector3_test.C /<>/test/Vector3_test.C: In function ‘int main(int, char**)’: /<>/test/Vector3_test.C:292:8: warning: variable ‘x’ set but not used [-Wunused-but-set-variable] 292 | float x = 5; | ^ [ 24%] Linking CXX executable ../bin/TEST/Vector3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector3_test.dir/Vector3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector3_test.dir/Vector3_test.C.o -o ../bin/TEST/Vector3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 24%] Built target Vector3_test make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build make[5]: Entering directory '/<>/build' [ 24%] Automatic MOC for target VIEW /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 27%] Built target VIEW_autogen make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color= make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/VIEW.dir/build'. make[5]: Leaving directory '/<>/build' [ 38%] Built target VIEW make -f test/CMakeFiles/HBondModel_test_autogen.dir/build.make test/CMakeFiles/HBondModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HBondModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HBondModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HBondModel_test_autogen.dir/build.make test/CMakeFiles/HBondModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target HBondModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HBondModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target HBondModel_test_autogen make -f test/CMakeFiles/HBondModel_test.dir/build.make test/CMakeFiles/HBondModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HBondModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target HBondModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HBondModel_test.dir/build.make test/CMakeFiles/HBondModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/HBondModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HBondModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/HBondModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o -c /<>/test/HBondModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/HBondModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/HBondModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HBondModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HBondModel_test.dir/HBondModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/HBondModel_test.dir/HBondModel_test.C.o -o ../bin/TEST/HBondModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 38%] Built target HBondModel_test make -f test/CMakeFiles/LabelModel_test_autogen.dir/build.make test/CMakeFiles/LabelModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LabelModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LabelModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LabelModel_test_autogen.dir/build.make test/CMakeFiles/LabelModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target LabelModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LabelModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target LabelModel_test_autogen make -f test/CMakeFiles/LabelModel_test.dir/build.make test/CMakeFiles/LabelModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LabelModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target LabelModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LabelModel_test.dir/build.make test/CMakeFiles/LabelModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/LabelModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/LabelModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/LabelModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o -c /<>/test/LabelModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LabelModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/LabelModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabelModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LabelModel_test.dir/LabelModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LabelModel_test.dir/LabelModel_test.C.o -o ../bin/TEST/LabelModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 38%] Built target LabelModel_test make -f test/CMakeFiles/BallAndStickModel_test_autogen.dir/build.make test/CMakeFiles/BallAndStickModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BallAndStickModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BallAndStickModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BallAndStickModel_test_autogen.dir/build.make test/CMakeFiles/BallAndStickModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target BallAndStickModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BallAndStickModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target BallAndStickModel_test_autogen make -f test/CMakeFiles/BallAndStickModel_test.dir/build.make test/CMakeFiles/BallAndStickModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BallAndStickModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target BallAndStickModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BallAndStickModel_test.dir/build.make test/CMakeFiles/BallAndStickModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/BallAndStickModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BallAndStickModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/BallAndStickModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o -c /<>/test/BallAndStickModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BallAndStickModel_test.C:8: /<>/test/BallAndStickModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/BallAndStickModel_test.C:117:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 117 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BallAndStickModel_test.C:8: /<>/test/BallAndStickModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:141:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/BallAndStickModel_test.C:117:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 117 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/BallAndStickModel_test.C:117:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 117 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BallAndStickModel_test.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BallAndStickModel_test.C:8: /<>/test/BallAndStickModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/BallAndStickModel_test.C:117:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 117 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/BallAndStickModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BallAndStickModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/BallAndStickModel_test.dir/BallAndStickModel_test.C.o -o ../bin/TEST/BallAndStickModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 38%] Built target BallAndStickModel_test make -f test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target XDRPersistenceManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target XDRPersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/XDRPersistenceManager_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target XDRPersistenceManager_test_autogen make -f test/CMakeFiles/XDRPersistenceManager_test.dir/build.make test/CMakeFiles/XDRPersistenceManager_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/XDRPersistenceManager_test.dir/DependInfo.cmake --color= Scanning dependencies of target XDRPersistenceManager_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/XDRPersistenceManager_test.dir/build.make test/CMakeFiles/XDRPersistenceManager_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/XDRPersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/XDRPersistenceManager_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/XDRPersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o -c /<>/test/XDRPersistenceManager_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/XDRPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/XDRPersistenceManager.h:9, from /<>/test/XDRPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/XDRPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/XDRPersistenceManager.h:9, from /<>/test/XDRPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/XDRPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/XDRPersistenceManager.h:9, from /<>/test/XDRPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/XDRPersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/XDRPersistenceManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/XDRPersistenceManager_test.dir/XDRPersistenceManager_test.C.o -o ../bin/TEST/XDRPersistenceManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target XDRPersistenceManager_test make -f test/CMakeFiles/SNBModel_test_autogen.dir/build.make test/CMakeFiles/SNBModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SNBModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SNBModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SNBModel_test_autogen.dir/build.make test/CMakeFiles/SNBModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target SNBModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SNBModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target SNBModel_test_autogen make -f test/CMakeFiles/SNBModel_test.dir/build.make test/CMakeFiles/SNBModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SNBModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target SNBModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SNBModel_test.dir/build.make test/CMakeFiles/SNBModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SNBModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SNBModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SNBModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o -c /<>/test/SNBModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/SNBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/SNBModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SNBModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SNBModel_test.dir/SNBModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/SNBModel_test.dir/SNBModel_test.C.o -o ../bin/TEST/SNBModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target SNBModel_test make -f test/CMakeFiles/RRModel_test_autogen.dir/build.make test/CMakeFiles/RRModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RRModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RRModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RRModel_test_autogen.dir/build.make test/CMakeFiles/RRModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target RRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RRModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target RRModel_test_autogen make -f test/CMakeFiles/RRModel_test.dir/build.make test/CMakeFiles/RRModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RRModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target RRModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RRModel_test.dir/build.make test/CMakeFiles/RRModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RRModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/RRModel_test.dir/RRModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RRModel_test.dir/RRModel_test.C.o -c /<>/test/RRModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/RRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/RRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RRModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RRModel_test.dir/RRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/RRModel_test.dir/RRModel_test.C.o -o ../bin/TEST/RRModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target RRModel_test make -f test/CMakeFiles/PCRModel_test_autogen.dir/build.make test/CMakeFiles/PCRModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PCRModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PCRModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PCRModel_test_autogen.dir/build.make test/CMakeFiles/PCRModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target PCRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PCRModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target PCRModel_test_autogen make -f test/CMakeFiles/PCRModel_test.dir/build.make test/CMakeFiles/PCRModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PCRModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target PCRModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PCRModel_test.dir/build.make test/CMakeFiles/PCRModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PCRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PCRModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PCRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o -c /<>/test/PCRModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/PCRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCRModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PCRModel_test.dir/PCRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/PCRModel_test.dir/PCRModel_test.C.o -o ../bin/TEST/PCRModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target PCRModel_test make -f test/CMakeFiles/LDAModel_test_autogen.dir/build.make test/CMakeFiles/LDAModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LDAModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LDAModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LDAModel_test_autogen.dir/build.make test/CMakeFiles/LDAModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target LDAModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LDAModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target LDAModel_test_autogen make -f test/CMakeFiles/LDAModel_test.dir/build.make test/CMakeFiles/LDAModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LDAModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target LDAModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LDAModel_test.dir/build.make test/CMakeFiles/LDAModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LDAModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/LDAModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LDAModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o -c /<>/test/LDAModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/LDAModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/LDAModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LDAModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LDAModel_test.dir/LDAModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LDAModel_test.dir/LDAModel_test.C.o -o ../bin/TEST/LDAModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target LDAModel_test make -f test/CMakeFiles/PLSModel_test_autogen.dir/build.make test/CMakeFiles/PLSModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PLSModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PLSModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PLSModel_test_autogen.dir/build.make test/CMakeFiles/PLSModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target PLSModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PLSModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target PLSModel_test_autogen make -f test/CMakeFiles/PLSModel_test.dir/build.make test/CMakeFiles/PLSModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PLSModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target PLSModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PLSModel_test.dir/build.make test/CMakeFiles/PLSModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PLSModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PLSModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PLSModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o -c /<>/test/PLSModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/PLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/PLSModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PLSModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PLSModel_test.dir/PLSModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/PLSModel_test.dir/PLSModel_test.C.o -o ../bin/TEST/PLSModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target PLSModel_test make -f test/CMakeFiles/KPCRModel_test_autogen.dir/build.make test/CMakeFiles/KPCRModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KPCRModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target KPCRModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KPCRModel_test_autogen.dir/build.make test/CMakeFiles/KPCRModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target KPCRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/KPCRModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target KPCRModel_test_autogen make -f test/CMakeFiles/KPCRModel_test.dir/build.make test/CMakeFiles/KPCRModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KPCRModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target KPCRModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KPCRModel_test.dir/build.make test/CMakeFiles/KPCRModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KPCRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/KPCRModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KPCRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o -c /<>/test/KPCRModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPCRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/KPCRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KPCRModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KPCRModel_test.dir/KPCRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KPCRModel_test.dir/KPCRModel_test.C.o -o ../bin/TEST/KPCRModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target KPCRModel_test make -f test/CMakeFiles/KNNModel_test_autogen.dir/build.make test/CMakeFiles/KNNModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KNNModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target KNNModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KNNModel_test_autogen.dir/build.make test/CMakeFiles/KNNModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 38%] Automatic MOC for target KNNModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/KNNModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 38%] Built target KNNModel_test_autogen make -f test/CMakeFiles/KNNModel_test.dir/build.make test/CMakeFiles/KNNModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KNNModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target KNNModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KNNModel_test.dir/build.make test/CMakeFiles/KNNModel_test.dir/build make[5]: Entering directory '/<>/build' [ 38%] Building CXX object test/CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KNNModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/KNNModel_test_autogen/mocs_compilation.cpp [ 38%] Building CXX object test/CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KNNModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o -c /<>/test/KNNModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KNNModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 38%] Linking CXX executable ../bin/TEST/KNNModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KNNModel_test.dir/KNNModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KNNModel_test.dir/KNNModel_test.C.o -o ../bin/TEST/KNNModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 38%] Built target KNNModel_test make -f test/CMakeFiles/GPModel_test_autogen.dir/build.make test/CMakeFiles/GPModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GPModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GPModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GPModel_test_autogen.dir/build.make test/CMakeFiles/GPModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 39%] Automatic MOC for target GPModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/GPModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 39%] Built target GPModel_test_autogen make -f test/CMakeFiles/GPModel_test.dir/build.make test/CMakeFiles/GPModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GPModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target GPModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GPModel_test.dir/build.make test/CMakeFiles/GPModel_test.dir/build make[5]: Entering directory '/<>/build' [ 39%] Building CXX object test/CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GPModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/GPModel_test_autogen/mocs_compilation.cpp [ 39%] Building CXX object test/CMakeFiles/GPModel_test.dir/GPModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GPModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GPModel_test.dir/GPModel_test.C.o -c /<>/test/GPModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/GPModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 39%] Linking CXX executable ../bin/TEST/GPModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GPModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GPModel_test.dir/GPModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/GPModel_test.dir/GPModel_test.C.o -o ../bin/TEST/GPModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 39%] Built target GPModel_test make -f test/CMakeFiles/FeatureSelection_test_autogen.dir/build.make test/CMakeFiles/FeatureSelection_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FeatureSelection_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FeatureSelection_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FeatureSelection_test_autogen.dir/build.make test/CMakeFiles/FeatureSelection_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 39%] Automatic MOC for target FeatureSelection_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/FeatureSelection_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 39%] Built target FeatureSelection_test_autogen make -f test/CMakeFiles/FeatureSelection_test.dir/build.make test/CMakeFiles/FeatureSelection_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FeatureSelection_test.dir/DependInfo.cmake --color= Scanning dependencies of target FeatureSelection_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FeatureSelection_test.dir/build.make test/CMakeFiles/FeatureSelection_test.dir/build make[5]: Entering directory '/<>/build' [ 39%] Building CXX object test/CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FeatureSelection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/FeatureSelection_test_autogen/mocs_compilation.cpp [ 39%] Building CXX object test/CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FeatureSelection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o -c /<>/test/FeatureSelection_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/FeatureSelection_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 39%] Linking CXX executable ../bin/TEST/FeatureSelection_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureSelection_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test_autogen/mocs_compilation.cpp.o CMakeFiles/FeatureSelection_test.dir/FeatureSelection_test.C.o -o ../bin/TEST/FeatureSelection_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 39%] Built target FeatureSelection_test make -f test/CMakeFiles/ALLModel_test_autogen.dir/build.make test/CMakeFiles/ALLModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ALLModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ALLModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ALLModel_test_autogen.dir/build.make test/CMakeFiles/ALLModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 39%] Automatic MOC for target ALLModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ALLModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 39%] Built target ALLModel_test_autogen make -f test/CMakeFiles/ALLModel_test.dir/build.make test/CMakeFiles/ALLModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ALLModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target ALLModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ALLModel_test.dir/build.make test/CMakeFiles/ALLModel_test.dir/build make[5]: Entering directory '/<>/build' [ 39%] Building CXX object test/CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ALLModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ALLModel_test_autogen/mocs_compilation.cpp [ 39%] Building CXX object test/CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ALLModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o -c /<>/test/ALLModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/ALLModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 39%] Linking CXX executable ../bin/TEST/ALLModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ALLModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ALLModel_test.dir/ALLModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/ALLModel_test.dir/ALLModel_test.C.o -o ../bin/TEST/ALLModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 39%] Built target ALLModel_test make -f test/CMakeFiles/SurfaceBase_test_autogen.dir/build.make test/CMakeFiles/SurfaceBase_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceBase_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceBase_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceBase_test_autogen.dir/build.make test/CMakeFiles/SurfaceBase_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 40%] Automatic MOC for target SurfaceBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SurfaceBase_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 40%] Built target SurfaceBase_test_autogen make -f test/CMakeFiles/SurfaceBase_test.dir/build.make test/CMakeFiles/SurfaceBase_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceBase_test.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceBase_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceBase_test.dir/build.make test/CMakeFiles/SurfaceBase_test.dir/build make[5]: Entering directory '/<>/build' [ 40%] Building CXX object test/CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SurfaceBase_test_autogen/mocs_compilation.cpp [ 40%] Building CXX object test/CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o -c /<>/test/SurfaceBase_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/test/SurfaceBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 40%] Linking CXX executable ../bin/TEST/SurfaceBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceBase_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceBase_test.dir/SurfaceBase_test.C.o -o ../bin/TEST/SurfaceBase_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 40%] Built target SurfaceBase_test make -f test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build.make test/CMakeFiles/SimpleDescriptors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleDescriptors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleDescriptors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build.make test/CMakeFiles/SimpleDescriptors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 40%] Automatic MOC for target SimpleDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SimpleDescriptors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 40%] Built target SimpleDescriptors_test_autogen make -f test/CMakeFiles/SimpleDescriptors_test.dir/build.make test/CMakeFiles/SimpleDescriptors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleDescriptors_test.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleDescriptors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleDescriptors_test.dir/build.make test/CMakeFiles/SimpleDescriptors_test.dir/build make[5]: Entering directory '/<>/build' [ 40%] Building CXX object test/CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SimpleDescriptors_test_autogen/mocs_compilation.cpp [ 40%] Building CXX object test/CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o -c /<>/test/SimpleDescriptors_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/SimpleDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 40%] Linking CXX executable ../bin/TEST/SimpleDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleDescriptors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleDescriptors_test.dir/SimpleDescriptors_test.C.o -o ../bin/TEST/SimpleDescriptors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 40%] Built target SimpleDescriptors_test make -f test/CMakeFiles/SimpleBase_test_autogen.dir/build.make test/CMakeFiles/SimpleBase_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleBase_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleBase_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleBase_test_autogen.dir/build.make test/CMakeFiles/SimpleBase_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 40%] Automatic MOC for target SimpleBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SimpleBase_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 40%] Built target SimpleBase_test_autogen make -f test/CMakeFiles/SimpleBase_test.dir/build.make test/CMakeFiles/SimpleBase_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleBase_test.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleBase_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleBase_test.dir/build.make test/CMakeFiles/SimpleBase_test.dir/build make[5]: Entering directory '/<>/build' [ 41%] Building CXX object test/CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SimpleBase_test_autogen/mocs_compilation.cpp [ 41%] Building CXX object test/CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o -c /<>/test/SimpleBase_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/test/SimpleBase_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 41%] Linking CXX executable ../bin/TEST/SimpleBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleBase_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleBase_test.dir/SimpleBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleBase_test.dir/SimpleBase_test.C.o -o ../bin/TEST/SimpleBase_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 41%] Built target SimpleBase_test make -f test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RingPerceptionProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 41%] Automatic MOC for target RingPerceptionProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RingPerceptionProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 41%] Built target RingPerceptionProcessor_test_autogen make -f test/CMakeFiles/RingPerceptionProcessor_test.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RingPerceptionProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target RingPerceptionProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RingPerceptionProcessor_test.dir/build.make test/CMakeFiles/RingPerceptionProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 43%] Building CXX object test/CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RingPerceptionProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp [ 43%] Building CXX object test/CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RingPerceptionProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o -c /<>/test/RingPerceptionProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/RingPerceptionProcessor_test.C: In function ‘int main(int, char**)’: /<>/test/RingPerceptionProcessor_test.C:61:30: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 61 | a_it = molecule->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/RingPerceptionProcessor_test.C:16: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 63 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/RingPerceptionProcessor_test.C:16: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 63 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/test/RingPerceptionProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/RingPerceptionProcessor_test.C:16: /<>/test/RingPerceptionProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/RingPerceptionProcessor_test.C:63:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 63 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 43%] Linking CXX executable ../bin/TEST/RingPerceptionProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RingPerceptionProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/RingPerceptionProcessor_test.dir/RingPerceptionProcessor_test.C.o -o ../bin/TEST/RingPerceptionProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 43%] Built target RingPerceptionProcessor_test make -f test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargeDescriptors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 43%] Automatic MOC for target PartialChargeDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PartialChargeDescriptors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 43%] Built target PartialChargeDescriptors_test_autogen make -f test/CMakeFiles/PartialChargeDescriptors_test.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PartialChargeDescriptors_test.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargeDescriptors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PartialChargeDescriptors_test.dir/build.make test/CMakeFiles/PartialChargeDescriptors_test.dir/build make[5]: Entering directory '/<>/build' [ 43%] Building CXX object test/CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp [ 43%] Building CXX object test/CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o -c /<>/test/PartialChargeDescriptors_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/test/PartialChargeDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Linking CXX executable ../bin/TEST/PartialChargeDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeDescriptors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeDescriptors_test.dir/PartialChargeDescriptors_test.C.o -o ../bin/TEST/PartialChargeDescriptors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 43%] Built target PartialChargeDescriptors_test make -f test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build.make test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargeProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build.make test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 43%] Automatic MOC for target PartialChargeProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PartialChargeProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 43%] Built target PartialChargeProcessor_test_autogen make -f test/CMakeFiles/PartialChargeProcessor_test.dir/build.make test/CMakeFiles/PartialChargeProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PartialChargeProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargeProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PartialChargeProcessor_test.dir/build.make test/CMakeFiles/PartialChargeProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 43%] Building CXX object test/CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PartialChargeProcessor_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o -c /<>/test/PartialChargeProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/PartialChargeProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/PartialChargeProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/PartialChargeProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/PartialChargeProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/PartialChargeProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/PartialChargeProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/PartialChargeProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeProcessor_test.dir/PartialChargeProcessor_test.C.o -o ../bin/TEST/PartialChargeProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target PartialChargeProcessor_test make -f test/CMakeFiles/Descriptors_test_autogen.dir/build.make test/CMakeFiles/Descriptors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Descriptors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Descriptors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Descriptors_test_autogen.dir/build.make test/CMakeFiles/Descriptors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target Descriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Descriptors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target Descriptors_test_autogen make -f test/CMakeFiles/Descriptors_test.dir/build.make test/CMakeFiles/Descriptors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Descriptors_test.dir/DependInfo.cmake --color= Scanning dependencies of target Descriptors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Descriptors_test.dir/build.make test/CMakeFiles/Descriptors_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Descriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Descriptors_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Descriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o -c /<>/test/Descriptors_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/Descriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/Descriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Descriptors_test.dir/Descriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/Descriptors_test.dir/Descriptors_test.C.o -o ../bin/TEST/Descriptors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target Descriptors_test make -f test/CMakeFiles/ConnectivityBase_test_autogen.dir/build.make test/CMakeFiles/ConnectivityBase_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectivityBase_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectivityBase_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectivityBase_test_autogen.dir/build.make test/CMakeFiles/ConnectivityBase_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target ConnectivityBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConnectivityBase_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target ConnectivityBase_test_autogen make -f test/CMakeFiles/ConnectivityBase_test.dir/build.make test/CMakeFiles/ConnectivityBase_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectivityBase_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectivityBase_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectivityBase_test.dir/build.make test/CMakeFiles/ConnectivityBase_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectivityBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConnectivityBase_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectivityBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o -c /<>/test/ConnectivityBase_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/test/ConnectivityBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/ConnectivityBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectivityBase_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectivityBase_test.dir/ConnectivityBase_test.C.o -o ../bin/TEST/ConnectivityBase_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target ConnectivityBase_test make -f test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build.make test/CMakeFiles/AromaticityProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AromaticityProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AromaticityProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build.make test/CMakeFiles/AromaticityProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target AromaticityProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AromaticityProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target AromaticityProcessor_test_autogen make -f test/CMakeFiles/AromaticityProcessor_test.dir/build.make test/CMakeFiles/AromaticityProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AromaticityProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target AromaticityProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AromaticityProcessor_test.dir/build.make test/CMakeFiles/AromaticityProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AromaticityProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AromaticityProcessor_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AromaticityProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o -c /<>/test/AromaticityProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/AromaticityProcessor_test.C: In function ‘int main(int, char**)’: /<>/test/AromaticityProcessor_test.C:62:30: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 62 | a_it = molecule->beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AromaticityProcessor_test.C:15: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 65 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AromaticityProcessor_test.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 65 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/test/AromaticityProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AromaticityProcessor_test.C:15: /<>/test/AromaticityProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AromaticityProcessor_test.C:65:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 65 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/AromaticityProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AromaticityProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AromaticityProcessor_test.dir/AromaticityProcessor_test.C.o -o ../bin/TEST/AromaticityProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target AromaticityProcessor_test make -f test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PairExpRDFIntegrator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target PairExpRDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PairExpRDFIntegrator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target PairExpRDFIntegrator_test_autogen make -f test/CMakeFiles/PairExpRDFIntegrator_test.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PairExpRDFIntegrator_test.dir/DependInfo.cmake --color= Scanning dependencies of target PairExpRDFIntegrator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PairExpRDFIntegrator_test.dir/build.make test/CMakeFiles/PairExpRDFIntegrator_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PairExpRDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PairExpRDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o -c /<>/test/PairExpRDFIntegrator_test.C [ 44%] Linking CXX executable ../bin/TEST/PairExpRDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PairExpRDFIntegrator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/PairExpRDFIntegrator_test.dir/PairExpRDFIntegrator_test.C.o -o ../bin/TEST/PairExpRDFIntegrator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target PairExpRDFIntegrator_test make -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Pair6_12InteractionEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target Pair6_12InteractionEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target Pair6_12InteractionEnergyProcessor_test_autogen make -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target Pair6_12InteractionEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Pair6_12InteractionEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o -c /<>/test/Pair6_12InteractionEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Pair6_12InteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/Pair6_12InteractionEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/Pair6_12InteractionEnergyProcessor_test.dir/Pair6_12InteractionEnergyProcessor_test.C.o -o ../bin/TEST/Pair6_12InteractionEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target Pair6_12InteractionEnergyProcessor_test make -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PierottiCavFreeEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target PierottiCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target PierottiCavFreeEnergyProcessor_test_autogen make -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target PierottiCavFreeEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PierottiCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PierottiCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o -c /<>/test/PierottiCavFreeEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/test/PierottiCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/PierottiCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PierottiCavFreeEnergyProcessor_test.dir/PierottiCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/PierottiCavFreeEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target PierottiCavFreeEnergyProcessor_test make -f test/CMakeFiles/Composite_test3_autogen.dir/build.make test/CMakeFiles/Composite_test3_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test3_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test3_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test3_autogen.dir/build.make test/CMakeFiles/Composite_test3_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target Composite_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test3_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target Composite_test3_autogen make -f test/CMakeFiles/Composite_test3.dir/build.make test/CMakeFiles/Composite_test3.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test3.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test3 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test3.dir/build.make test/CMakeFiles/Composite_test3.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test3_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/Composite_test3.dir/Composite_test3.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test3.dir/Composite_test3.C.o -c /<>/test/Composite_test3.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/Composite_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/Composite_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/Composite_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/Composite_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test3.dir/Composite_test3_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test3.dir/Composite_test3.C.o -o ../bin/TEST/Composite_test3 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target Composite_test3 make -f test/CMakeFiles/NucleicAcid_test_autogen.dir/build.make test/CMakeFiles/NucleicAcid_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NucleicAcid_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NucleicAcid_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NucleicAcid_test_autogen.dir/build.make test/CMakeFiles/NucleicAcid_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target NucleicAcid_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NucleicAcid_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target NucleicAcid_test_autogen make -f test/CMakeFiles/NucleicAcid_test.dir/build.make test/CMakeFiles/NucleicAcid_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NucleicAcid_test.dir/DependInfo.cmake --color= Scanning dependencies of target NucleicAcid_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NucleicAcid_test.dir/build.make test/CMakeFiles/NucleicAcid_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NucleicAcid_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NucleicAcid_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NucleicAcid_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o -c /<>/test/NucleicAcid_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/test/NucleicAcid_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 44%] Linking CXX executable ../bin/TEST/NucleicAcid_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcid_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test_autogen/mocs_compilation.cpp.o CMakeFiles/NucleicAcid_test.dir/NucleicAcid_test.C.o -o ../bin/TEST/NucleicAcid_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target NucleicAcid_test make -f test/CMakeFiles/ContourLine_test_autogen.dir/build.make test/CMakeFiles/ContourLine_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ContourLine_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ContourLine_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ContourLine_test_autogen.dir/build.make test/CMakeFiles/ContourLine_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target ContourLine_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ContourLine_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target ContourLine_test_autogen make -f test/CMakeFiles/ContourLine_test.dir/build.make test/CMakeFiles/ContourLine_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ContourLine_test.dir/DependInfo.cmake --color= Scanning dependencies of target ContourLine_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ContourLine_test.dir/build.make test/CMakeFiles/ContourLine_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ContourLine_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ContourLine_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ContourLine_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o -c /<>/test/ContourLine_test.C [ 44%] Linking CXX executable ../bin/TEST/ContourLine_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ContourLine_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ContourLine_test.dir/ContourLine_test_autogen/mocs_compilation.cpp.o CMakeFiles/ContourLine_test.dir/ContourLine_test.C.o -o ../bin/TEST/ContourLine_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target ContourLine_test make -f test/CMakeFiles/Parameters_test_autogen.dir/build.make test/CMakeFiles/Parameters_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Parameters_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Parameters_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Parameters_test_autogen.dir/build.make test/CMakeFiles/Parameters_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target Parameters_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Parameters_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target Parameters_test_autogen make -f test/CMakeFiles/Parameters_test.dir/build.make test/CMakeFiles/Parameters_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Parameters_test.dir/DependInfo.cmake --color= Scanning dependencies of target Parameters_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Parameters_test.dir/build.make test/CMakeFiles/Parameters_test.dir/build make[5]: Entering directory '/<>/build' [ 44%] Building CXX object test/CMakeFiles/Parameters_test.dir/Parameters_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Parameters_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Parameters_test.dir/Parameters_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Parameters_test_autogen/mocs_compilation.cpp [ 44%] Building CXX object test/CMakeFiles/Parameters_test.dir/Parameters_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Parameters_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Parameters_test.dir/Parameters_test.C.o -c /<>/test/Parameters_test.C [ 44%] Linking CXX executable ../bin/TEST/Parameters_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Parameters_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Parameters_test.dir/Parameters_test_autogen/mocs_compilation.cpp.o CMakeFiles/Parameters_test.dir/Parameters_test.C.o -o ../bin/TEST/Parameters_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 44%] Built target Parameters_test make -f test/CMakeFiles/Chain_test_autogen.dir/build.make test/CMakeFiles/Chain_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Chain_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Chain_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Chain_test_autogen.dir/build.make test/CMakeFiles/Chain_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 44%] Automatic MOC for target Chain_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Chain_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 44%] Built target Chain_test_autogen make -f test/CMakeFiles/Chain_test.dir/build.make test/CMakeFiles/Chain_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Chain_test.dir/DependInfo.cmake --color= Scanning dependencies of target Chain_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Chain_test.dir/build.make test/CMakeFiles/Chain_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Chain_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Chain_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/Chain_test.dir/Chain_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Chain_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Chain_test.dir/Chain_test.C.o -c /<>/test/Chain_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Chain_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 45%] Linking CXX executable ../bin/TEST/Chain_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Chain_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Chain_test.dir/Chain_test_autogen/mocs_compilation.cpp.o CMakeFiles/Chain_test.dir/Chain_test.C.o -o ../bin/TEST/Chain_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target Chain_test make -f test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target ShiftedLVMMMinimizer_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target ShiftedLVMMMinimizer_test2_autogen make -f test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o -c /<>/test/ShiftedLVMMMinimizer_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test2.C: In function ‘int main(int, char**)’: /<>/test/ShiftedLVMMMinimizer_test2.C:358:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 358 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test2.C: In function ‘int main(int, char**)’: /<>/test/ShiftedLVMMMinimizer_test2.C:358:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 358 | for (atit = S.beginAtom(); +atit; ++atit) | ^ /<>/test/ShiftedLVMMMinimizer_test2.C:429:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 429 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test2.C:500:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 500 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 45%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test2.dir/ShiftedLVMMMinimizer_test2.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target ShiftedLVMMMinimizer_test2 make -f test/CMakeFiles/Object_test_autogen.dir/build.make test/CMakeFiles/Object_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Object_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Object_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Object_test_autogen.dir/build.make test/CMakeFiles/Object_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target Object_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Object_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target Object_test_autogen make -f test/CMakeFiles/Object_test.dir/build.make test/CMakeFiles/Object_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Object_test.dir/DependInfo.cmake --color= Scanning dependencies of target Object_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Object_test.dir/build.make test/CMakeFiles/Object_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Object_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Object_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/Object_test.dir/Object_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Object_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Object_test.dir/Object_test.C.o -c /<>/test/Object_test.C [ 45%] Linking CXX executable ../bin/TEST/Object_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Object_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Object_test.dir/Object_test_autogen/mocs_compilation.cpp.o CMakeFiles/Object_test.dir/Object_test.C.o -o ../bin/TEST/Object_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target Object_test make -f test/CMakeFiles/UCK_test_autogen.dir/build.make test/CMakeFiles/UCK_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/UCK_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target UCK_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/UCK_test_autogen.dir/build.make test/CMakeFiles/UCK_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target UCK_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/UCK_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target UCK_test_autogen make -f test/CMakeFiles/UCK_test.dir/build.make test/CMakeFiles/UCK_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/UCK_test.dir/DependInfo.cmake --color= Scanning dependencies of target UCK_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/UCK_test.dir/build.make test/CMakeFiles/UCK_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/UCK_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/UCK_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/UCK_test.dir/UCK_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/UCK_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/UCK_test.dir/UCK_test.C.o -c /<>/test/UCK_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/UCK_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/UCK_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/UCK_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/UCK_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/UCK_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/UCK_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 45%] Linking CXX executable ../bin/TEST/UCK_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/UCK_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/UCK_test.dir/UCK_test_autogen/mocs_compilation.cpp.o CMakeFiles/UCK_test.dir/UCK_test.C.o -o ../bin/TEST/UCK_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target UCK_test make -f test/CMakeFiles/ConformationSet_test_autogen.dir/build.make test/CMakeFiles/ConformationSet_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConformationSet_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConformationSet_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConformationSet_test_autogen.dir/build.make test/CMakeFiles/ConformationSet_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target ConformationSet_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConformationSet_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target ConformationSet_test_autogen make -f test/CMakeFiles/ConformationSet_test.dir/build.make test/CMakeFiles/ConformationSet_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConformationSet_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConformationSet_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConformationSet_test.dir/build.make test/CMakeFiles/ConformationSet_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConformationSet_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConformationSet_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConformationSet_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o -c /<>/test/ConformationSet_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/test/ConformationSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 45%] Linking CXX executable ../bin/TEST/ConformationSet_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConformationSet_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConformationSet_test.dir/ConformationSet_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConformationSet_test.dir/ConformationSet_test.C.o -o ../bin/TEST/ConformationSet_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target ConformationSet_test make -f test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build.make test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PiecewisePolynomial_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build.make test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target PiecewisePolynomial_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PiecewisePolynomial_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target PiecewisePolynomial_test_autogen make -f test/CMakeFiles/PiecewisePolynomial_test.dir/build.make test/CMakeFiles/PiecewisePolynomial_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PiecewisePolynomial_test.dir/DependInfo.cmake --color= Scanning dependencies of target PiecewisePolynomial_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PiecewisePolynomial_test.dir/build.make test/CMakeFiles/PiecewisePolynomial_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PiecewisePolynomial_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PiecewisePolynomial_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PiecewisePolynomial_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o -c /<>/test/PiecewisePolynomial_test.C [ 45%] Linking CXX executable ../bin/TEST/PiecewisePolynomial_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PiecewisePolynomial_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test_autogen/mocs_compilation.cpp.o CMakeFiles/PiecewisePolynomial_test.dir/PiecewisePolynomial_test.C.o -o ../bin/TEST/PiecewisePolynomial_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target PiecewisePolynomial_test make -f test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/RandomAccessIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RandomAccessIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RandomAccessIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/RandomAccessIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target RandomAccessIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RandomAccessIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target RandomAccessIterator_test_autogen make -f test/CMakeFiles/RandomAccessIterator_test.dir/build.make test/CMakeFiles/RandomAccessIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RandomAccessIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target RandomAccessIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RandomAccessIterator_test.dir/build.make test/CMakeFiles/RandomAccessIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 45%] Building CXX object test/CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RandomAccessIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RandomAccessIterator_test_autogen/mocs_compilation.cpp [ 45%] Building CXX object test/CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RandomAccessIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o -c /<>/test/RandomAccessIterator_test.C [ 45%] Linking CXX executable ../bin/TEST/RandomAccessIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomAccessIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RandomAccessIterator_test.dir/RandomAccessIterator_test.C.o -o ../bin/TEST/RandomAccessIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 45%] Built target RandomAccessIterator_test make -f test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConstRandomAccessIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 45%] Automatic MOC for target ConstRandomAccessIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConstRandomAccessIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 45%] Built target ConstRandomAccessIterator_test_autogen make -f test/CMakeFiles/ConstRandomAccessIterator_test.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstRandomAccessIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConstRandomAccessIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstRandomAccessIterator_test.dir/build.make test/CMakeFiles/ConstRandomAccessIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 46%] Building CXX object test/CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstRandomAccessIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp [ 46%] Building CXX object test/CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstRandomAccessIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o -c /<>/test/ConstRandomAccessIterator_test.C /<>/test/ConstRandomAccessIterator_test.C: In function ‘int main(int, char**)’: /<>/test/ConstRandomAccessIterator_test.C:387:10: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 387 | p = m + 2; | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, float, int, VectorIteratorTraits_ >& BALL::ConstBidirectionalIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstBidirectionalIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/randomAccessIterator.h:13, from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C: In function ‘int main(int, char**)’: /<>/test/ConstRandomAccessIterator_test.C:387:10: note: synthesized method ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ first required here 387 | p = m + 2; | ^ /<>/test/ConstRandomAccessIterator_test.C:389:10: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 389 | p = m + 4; | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:402:10: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 402 | p = m - 2; | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:404:10: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 404 | p = m - 5; | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:422:24: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 422 | m1 = MyIterator::end(v); | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:441:38: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 441 | m1 = MyIterator(MyIterator::begin(v)); | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:459:38: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 459 | m1 = MyIterator(MyIterator::begin(v)); | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:480:38: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 480 | m1 = MyIterator(MyIterator::begin(v)); | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConstRandomAccessIterator_test.C:496:38: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >& BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >::operator=(const BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >&)’ is deprecated [-Wdeprecated-copy] 496 | m1 = MyIterator(MyIterator::begin(v)); | ^ In file included from /<>/test/ConstRandomAccessIterator_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator, float, int, VectorIteratorTraits_ >’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = std::vector; DataType = float; Position = int; Traits = VectorIteratorTraits_]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Linking CXX executable ../bin/TEST/ConstRandomAccessIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstRandomAccessIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstRandomAccessIterator_test.dir/ConstRandomAccessIterator_test.C.o -o ../bin/TEST/ConstRandomAccessIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 46%] Built target ConstRandomAccessIterator_test make -f test/CMakeFiles/SnapShotManager_test_autogen.dir/build.make test/CMakeFiles/SnapShotManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SnapShotManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SnapShotManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SnapShotManager_test_autogen.dir/build.make test/CMakeFiles/SnapShotManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 46%] Automatic MOC for target SnapShotManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SnapShotManager_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 46%] Built target SnapShotManager_test_autogen make -f test/CMakeFiles/SnapShotManager_test.dir/build.make test/CMakeFiles/SnapShotManager_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SnapShotManager_test.dir/DependInfo.cmake --color= Scanning dependencies of target SnapShotManager_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SnapShotManager_test.dir/build.make test/CMakeFiles/SnapShotManager_test.dir/build make[5]: Entering directory '/<>/build' [ 46%] Building CXX object test/CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SnapShotManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SnapShotManager_test_autogen/mocs_compilation.cpp [ 46%] Building CXX object test/CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SnapShotManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o -c /<>/test/SnapShotManager_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SnapShotManager_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/test/SnapShotManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SnapShotManager_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/test/SnapShotManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SnapShotManager_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/test/SnapShotManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/SnapShotManager_test.C: In function ‘int main(int, char**)’: /<>/test/SnapShotManager_test.C:83:7: warning: unused variable ‘nr_of_atoms’ [-Wunused-variable] 83 | Size nr_of_atoms = system.countAtoms(); | ^~~~~~~~~~~ [ 46%] Linking CXX executable ../bin/TEST/SnapShotManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SnapShotManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/SnapShotManager_test.dir/SnapShotManager_test.C.o -o ../bin/TEST/SnapShotManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 46%] Built target SnapShotManager_test make -f test/CMakeFiles/Expression_test_autogen.dir/build.make test/CMakeFiles/Expression_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Expression_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Expression_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Expression_test_autogen.dir/build.make test/CMakeFiles/Expression_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 46%] Automatic MOC for target Expression_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Expression_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 46%] Built target Expression_test_autogen make -f test/CMakeFiles/Expression_test.dir/build.make test/CMakeFiles/Expression_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Expression_test.dir/DependInfo.cmake --color= Scanning dependencies of target Expression_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Expression_test.dir/build.make test/CMakeFiles/Expression_test.dir/build make[5]: Entering directory '/<>/build' [ 46%] Building CXX object test/CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Expression_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Expression_test_autogen/mocs_compilation.cpp [ 46%] Building CXX object test/CMakeFiles/Expression_test.dir/Expression_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Expression_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Expression_test.dir/Expression_test.C.o -c /<>/test/Expression_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/Expression_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Expression_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/Expression_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Expression_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/Expression_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Expression_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 46%] Linking CXX executable ../bin/TEST/Expression_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Expression_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Expression_test.dir/Expression_test_autogen/mocs_compilation.cpp.o CMakeFiles/Expression_test.dir/Expression_test.C.o -o ../bin/TEST/Expression_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 46%] Built target Expression_test make -f test/CMakeFiles/Embeddable_test_autogen.dir/build.make test/CMakeFiles/Embeddable_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Embeddable_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Embeddable_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Embeddable_test_autogen.dir/build.make test/CMakeFiles/Embeddable_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 46%] Automatic MOC for target Embeddable_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Embeddable_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 46%] Built target Embeddable_test_autogen make -f test/CMakeFiles/Embeddable_test.dir/build.make test/CMakeFiles/Embeddable_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Embeddable_test.dir/DependInfo.cmake --color= Scanning dependencies of target Embeddable_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Embeddable_test.dir/build.make test/CMakeFiles/Embeddable_test.dir/build make[5]: Entering directory '/<>/build' [ 46%] Building CXX object test/CMakeFiles/Embeddable_test.dir/Embeddable_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Embeddable_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Embeddable_test.dir/Embeddable_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Embeddable_test_autogen/mocs_compilation.cpp [ 46%] Building CXX object test/CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Embeddable_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o -c /<>/test/Embeddable_test.C [ 46%] Linking CXX executable ../bin/TEST/Embeddable_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Embeddable_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Embeddable_test.dir/Embeddable_test_autogen/mocs_compilation.cpp.o CMakeFiles/Embeddable_test.dir/Embeddable_test.C.o -o ../bin/TEST/Embeddable_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 46%] Built target Embeddable_test make -f test/CMakeFiles/AtomTypes_test_autogen.dir/build.make test/CMakeFiles/AtomTypes_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomTypes_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomTypes_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomTypes_test_autogen.dir/build.make test/CMakeFiles/AtomTypes_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 46%] Automatic MOC for target AtomTypes_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomTypes_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 46%] Built target AtomTypes_test_autogen make -f test/CMakeFiles/AtomTypes_test.dir/build.make test/CMakeFiles/AtomTypes_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomTypes_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomTypes_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomTypes_test.dir/build.make test/CMakeFiles/AtomTypes_test.dir/build make[5]: Entering directory '/<>/build' [ 46%] Building CXX object test/CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomTypes_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomTypes_test_autogen/mocs_compilation.cpp [ 46%] Building CXX object test/CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomTypes_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o -c /<>/test/AtomTypes_test.C [ 46%] Linking CXX executable ../bin/TEST/AtomTypes_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomTypes_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomTypes_test.dir/AtomTypes_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomTypes_test.dir/AtomTypes_test.C.o -o ../bin/TEST/AtomTypes_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 46%] Built target AtomTypes_test make -f test/CMakeFiles/ForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ForwardIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test 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-isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ForwardIterator_test_autogen/mocs_compilation.cpp [ 47%] Building CXX object test/CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ForwardIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test.C.o -c /<>/test/ForwardIterator_test.C [ 47%] Linking CXX executable ../bin/TEST/ForwardIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForwardIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForwardIterator_test.dir/ForwardIterator_test_autogen/mocs_compilation.cpp.o 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-isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test2.dir/Matrix44_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/Matrix44_test2_autogen/mocs_compilation.cpp [ 47%] Building CXX object test/CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Matrix44_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o -c /<>/test/Matrix44_test2.C [ 47%] Linking CXX executable ../bin/TEST/Matrix44_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Matrix44_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Matrix44_test2.dir/Matrix44_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Matrix44_test2.dir/Matrix44_test2.C.o -o ../bin/TEST/Matrix44_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 47%] Built target Matrix44_test2 make -f test/CMakeFiles/BaseIterator_test_autogen.dir/build.make test/CMakeFiles/BaseIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test 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'/<>/build' make -f test/CMakeFiles/BaseIterator_test.dir/build.make test/CMakeFiles/BaseIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 47%] Building CXX object test/CMakeFiles/BaseIterator_test.dir/BaseIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BaseIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 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/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BaseIterator_test.dir/BaseIterator_test.C.o -c /<>/test/BaseIterator_test.C [ 47%] Linking CXX executable ../bin/TEST/BaseIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BaseIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BaseIterator_test.dir/BaseIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/BaseIterator_test.dir/BaseIterator_test.C.o -o ../bin/TEST/BaseIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 47%] Built target BaseIterator_test make -f test/CMakeFiles/Debug_test_autogen.dir/build.make test/CMakeFiles/Debug_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build 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test/CMakeFiles/Debug_test.dir/build make[5]: Entering directory '/<>/build' [ 47%] Building CXX object test/CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Debug_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Debug_test_autogen/mocs_compilation.cpp [ 47%] Building CXX object test/CMakeFiles/Debug_test.dir/Debug_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Debug_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Debug_test.dir/Debug_test.C.o -c /<>/test/Debug_test.C [ 48%] Linking CXX executable ../bin/TEST/Debug_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Debug_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Debug_test.dir/Debug_test_autogen/mocs_compilation.cpp.o CMakeFiles/Debug_test.dir/Debug_test.C.o -o ../bin/TEST/Debug_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target Debug_test make -f test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeAncestorIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target CompositeAncestorIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target CompositeAncestorIteratorTraits_test_autogen make -f test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeAncestorIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeAncestorIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeAncestorIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o -c /<>/test/CompositeAncestorIteratorTraits_test.C In file included from /<>/test/CompositeAncestorIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeAncestorIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeAncestorIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeAncestorIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeAncestorIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeAncestorIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 48%] Linking CXX executable ../bin/TEST/CompositeAncestorIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeAncestorIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeAncestorIteratorTraits_test.dir/CompositeAncestorIteratorTraits_test.C.o -o ../bin/TEST/CompositeAncestorIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target CompositeAncestorIteratorTraits_test make -f test/CMakeFiles/Composite_test6_autogen.dir/build.make test/CMakeFiles/Composite_test6_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test6_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test6_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test6_autogen.dir/build.make test/CMakeFiles/Composite_test6_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target Composite_test6 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test6_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target Composite_test6_autogen make -f test/CMakeFiles/Composite_test6.dir/build.make test/CMakeFiles/Composite_test6.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test6.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test6 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test6.dir/build.make test/CMakeFiles/Composite_test6.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test6_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test6_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/Composite_test6.dir/Composite_test6.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test6_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test6.dir/Composite_test6.C.o -c /<>/test/Composite_test6.C [ 48%] Linking CXX executable ../bin/TEST/Composite_test6 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test6.dir/Composite_test6_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test6.dir/Composite_test6.C.o -o ../bin/TEST/Composite_test6 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target Composite_test6 make -f test/CMakeFiles/Bond_test_autogen.dir/build.make test/CMakeFiles/Bond_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bond_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Bond_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bond_test_autogen.dir/build.make test/CMakeFiles/Bond_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target Bond_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Bond_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target Bond_test_autogen make -f test/CMakeFiles/Bond_test.dir/build.make test/CMakeFiles/Bond_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bond_test.dir/DependInfo.cmake --color= Scanning dependencies of target Bond_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bond_test.dir/build.make test/CMakeFiles/Bond_test.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bond_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Bond_test_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/Bond_test.dir/Bond_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bond_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bond_test.dir/Bond_test.C.o -c /<>/test/Bond_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Bond_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/test/Bond_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Bond_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/test/Bond_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Bond_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/test/Bond_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 48%] Linking CXX executable ../bin/TEST/Bond_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bond_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bond_test.dir/Bond_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bond_test.dir/Bond_test.C.o -o ../bin/TEST/Bond_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target Bond_test make -f test/CMakeFiles/PoseClustering_test2_autogen.dir/build.make test/CMakeFiles/PoseClustering_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test2_autogen.dir/build.make test/CMakeFiles/PoseClustering_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target PoseClustering_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PoseClustering_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target PoseClustering_test2_autogen make -f test/CMakeFiles/PoseClustering_test2.dir/build.make test/CMakeFiles/PoseClustering_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test2.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test2.dir/build.make test/CMakeFiles/PoseClustering_test2.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/PoseClustering_test2_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o -c /<>/test/PoseClustering_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 48%] Linking CXX executable ../bin/TEST/PoseClustering_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test2.dir/PoseClustering_test2.C.o -o ../bin/TEST/PoseClustering_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target PoseClustering_test2 make -f test/CMakeFiles/Socket_test_autogen.dir/build.make test/CMakeFiles/Socket_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Socket_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Socket_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Socket_test_autogen.dir/build.make test/CMakeFiles/Socket_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target Socket_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Socket_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target Socket_test_autogen make -f test/CMakeFiles/Socket_test.dir/build.make test/CMakeFiles/Socket_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Socket_test.dir/DependInfo.cmake --color= Scanning dependencies of target Socket_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Socket_test.dir/build.make test/CMakeFiles/Socket_test.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Socket_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Socket_test_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/Socket_test.dir/Socket_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Socket_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Socket_test.dir/Socket_test.C.o -c /<>/test/Socket_test.C [ 48%] Linking CXX executable ../bin/TEST/Socket_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Socket_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Socket_test.dir/Socket_test_autogen/mocs_compilation.cpp.o CMakeFiles/Socket_test.dir/Socket_test.C.o -o ../bin/TEST/Socket_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target Socket_test make -f test/CMakeFiles/StructureMapper_test_autogen.dir/build.make test/CMakeFiles/StructureMapper_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StructureMapper_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StructureMapper_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StructureMapper_test_autogen.dir/build.make test/CMakeFiles/StructureMapper_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target StructureMapper_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StructureMapper_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target StructureMapper_test_autogen make -f test/CMakeFiles/StructureMapper_test.dir/build.make test/CMakeFiles/StructureMapper_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StructureMapper_test.dir/DependInfo.cmake --color= Scanning dependencies of target StructureMapper_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StructureMapper_test.dir/build.make test/CMakeFiles/StructureMapper_test.dir/build make[5]: Entering directory '/<>/build' [ 48%] Building CXX object test/CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StructureMapper_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/StructureMapper_test_autogen/mocs_compilation.cpp [ 48%] Building CXX object test/CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StructureMapper_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o -c /<>/test/StructureMapper_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17, from /<>/test/StructureMapper_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 48%] Linking CXX executable ../bin/TEST/StructureMapper_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructureMapper_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StructureMapper_test.dir/StructureMapper_test_autogen/mocs_compilation.cpp.o CMakeFiles/StructureMapper_test.dir/StructureMapper_test.C.o -o ../bin/TEST/StructureMapper_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 48%] Built target StructureMapper_test make -f test/CMakeFiles/MLRModel_test_autogen.dir/build.make test/CMakeFiles/MLRModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MLRModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MLRModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MLRModel_test_autogen.dir/build.make test/CMakeFiles/MLRModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 48%] Automatic MOC for target MLRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MLRModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 48%] Built target MLRModel_test_autogen make -f test/CMakeFiles/MLRModel_test.dir/build.make test/CMakeFiles/MLRModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MLRModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target MLRModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MLRModel_test.dir/build.make test/CMakeFiles/MLRModel_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MLRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MLRModel_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MLRModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o -c /<>/test/MLRModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/MLRModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/MLRModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MLRModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MLRModel_test.dir/MLRModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/MLRModel_test.dir/MLRModel_test.C.o -o ../bin/TEST/MLRModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target MLRModel_test make -f test/CMakeFiles/Composite_test5_autogen.dir/build.make test/CMakeFiles/Composite_test5_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test5_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test5_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test5_autogen.dir/build.make test/CMakeFiles/Composite_test5_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target Composite_test5 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test5_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target Composite_test5_autogen make -f test/CMakeFiles/Composite_test5.dir/build.make test/CMakeFiles/Composite_test5.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test5.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test5 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test5.dir/build.make test/CMakeFiles/Composite_test5.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test5_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test5_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/Composite_test5.dir/Composite_test5.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test5_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test5.dir/Composite_test5.C.o -c /<>/test/Composite_test5.C /<>/test/Composite_test5.C: In function ‘int main(int, char**)’: /<>/test/Composite_test5.C:31:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 31 | sub_it = a.endChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test5.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test5.C: In function ‘int main(int, char**)’: /<>/test/Composite_test5.C:31:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 31 | sub_it = a.endChildComposite(); | ^ /<>/test/Composite_test5.C:56:62: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 56 | sub_it = const_cast(a).endChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test5.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/Composite_test5 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test5.dir/Composite_test5_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test5.dir/Composite_test5.C.o -o ../bin/TEST/Composite_test5 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target Composite_test5 make -f test/CMakeFiles/Enumerator_test_autogen.dir/build.make test/CMakeFiles/Enumerator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Enumerator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Enumerator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Enumerator_test_autogen.dir/build.make test/CMakeFiles/Enumerator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target Enumerator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Enumerator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target Enumerator_test_autogen make -f test/CMakeFiles/Enumerator_test.dir/build.make test/CMakeFiles/Enumerator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Enumerator_test.dir/DependInfo.cmake --color= Scanning dependencies of target Enumerator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Enumerator_test.dir/build.make test/CMakeFiles/Enumerator_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Enumerator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Enumerator_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Enumerator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o -c /<>/test/Enumerator_test.C In file included from /<>/test/Enumerator_test.C:9: /<>/include/BALL/CONCEPT/enumerator.h: In instantiation of ‘BALL::BaseIterator::BaseIterator(const BALL::BaseIterator&) [with Container = BALL::Enumerator >, char>; DataType = BALL::String; Position = BALL::EnumeratorIndex*; Traits = BALL::Enumerator >, char>::IteratorTraits_]’: /<>/include/BALL/CONCEPT/forwardIterator.h:48:66: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const BALL::ConstForwardIterator&) [with Container = BALL::Enumerator >, char>; DataType = BALL::String; Position = BALL::EnumeratorIndex*; Traits = BALL::Enumerator >, char>::IteratorTraits_]’ /<>/test/Enumerator_test.C:135:84: required from here /<>/include/BALL/CONCEPT/enumerator.h:426:9: warning: implicitly-declared ‘BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)’ is deprecated [-Wdeprecated-copy] 426 | class IteratorTraits_ | ^~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/enumerator.h:91:26: note: because ‘BALL::EnumeratorIndex’ has user-provided ‘const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)’ 91 | const EnumeratorIndex& operator = (const EnumeratorIndex& rhs); | ^~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/Enumerator_test.C:5: /<>/include/BALL/CONCEPT/baseIterator.h:93:30: note: synthesized method ‘BALL::Enumerator >, char>::IteratorTraits_::IteratorTraits_(const BALL::Enumerator >, char>::IteratorTraits_&)’ first required here 93 | : traits_(iterator.traits_) | ^ [ 50%] Linking CXX executable ../bin/TEST/Enumerator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Enumerator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Enumerator_test.dir/Enumerator_test_autogen/mocs_compilation.cpp.o CMakeFiles/Enumerator_test.dir/Enumerator_test.C.o -o ../bin/TEST/Enumerator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target Enumerator_test make -f test/CMakeFiles/Composite_test4_autogen.dir/build.make test/CMakeFiles/Composite_test4_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test4_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test4_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test4_autogen.dir/build.make test/CMakeFiles/Composite_test4_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target Composite_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test4_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target Composite_test4_autogen make -f test/CMakeFiles/Composite_test4.dir/build.make test/CMakeFiles/Composite_test4.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test4.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test4 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test4.dir/build.make test/CMakeFiles/Composite_test4.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test4_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/Composite_test4.dir/Composite_test4.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test4.dir/Composite_test4.C.o -c /<>/test/Composite_test4.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/Composite_test4.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test4.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/Composite_test4.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test4.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/Composite_test4.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test4.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/Composite_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test4.dir/Composite_test4_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test4.dir/Composite_test4.C.o -o ../bin/TEST/Composite_test4 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target Composite_test4 make -f test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SideChainPlacementProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target SideChainPlacementProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SideChainPlacementProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target SideChainPlacementProcessor_test_autogen make -f test/CMakeFiles/SideChainPlacementProcessor_test.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SideChainPlacementProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target SideChainPlacementProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SideChainPlacementProcessor_test.dir/build.make test/CMakeFiles/SideChainPlacementProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SideChainPlacementProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SideChainPlacementProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o -c /<>/test/SideChainPlacementProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/sideChainPlacementProcessor.h:9, from /<>/test/SideChainPlacementProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/SideChainPlacementProcessor_test.C: In function ‘int main(int, char**)’: /<>/test/SideChainPlacementProcessor_test.C:119:11: warning: unused variable ‘prot’ [-Wunused-variable] 119 | Protein* prot = sys.getProtein(0); | ^~~~ /<>/test/SideChainPlacementProcessor_test.C:128:9: warning: unused variable ‘chain3’ [-Wunused-variable] 128 | Chain* chain3 = (sys.getProtein(0)->getChain(2)); | ^~~~~~ [ 50%] Linking CXX executable ../bin/TEST/SideChainPlacementProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SideChainPlacementProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SideChainPlacementProcessor_test.dir/SideChainPlacementProcessor_test.C.o -o ../bin/TEST/SideChainPlacementProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target SideChainPlacementProcessor_test make -f test/CMakeFiles/PersistenceManager_test_autogen.dir/build.make test/CMakeFiles/PersistenceManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PersistenceManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PersistenceManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PersistenceManager_test_autogen.dir/build.make test/CMakeFiles/PersistenceManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target PersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PersistenceManager_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target PersistenceManager_test_autogen make -f test/CMakeFiles/PersistenceManager_test.dir/build.make test/CMakeFiles/PersistenceManager_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PersistenceManager_test.dir/DependInfo.cmake --color= Scanning dependencies of target PersistenceManager_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PersistenceManager_test.dir/build.make test/CMakeFiles/PersistenceManager_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PersistenceManager_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o -c /<>/test/PersistenceManager_test.C [ 50%] Linking CXX executable ../bin/TEST/PersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PersistenceManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/PersistenceManager_test.dir/PersistenceManager_test.C.o -o ../bin/TEST/PersistenceManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target PersistenceManager_test make -f test/CMakeFiles/PropertyManager_test_autogen.dir/build.make test/CMakeFiles/PropertyManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PropertyManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PropertyManager_test_autogen.dir/build.make test/CMakeFiles/PropertyManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target PropertyManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PropertyManager_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target PropertyManager_test_autogen make -f test/CMakeFiles/PropertyManager_test.dir/build.make test/CMakeFiles/PropertyManager_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PropertyManager_test.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyManager_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PropertyManager_test.dir/build.make test/CMakeFiles/PropertyManager_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PropertyManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PropertyManager_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PropertyManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o -c /<>/test/PropertyManager_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/PropertyManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/PropertyManager_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/PropertyManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/PropertyManager_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/PropertyManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/PropertyManager_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/PropertyManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyManager_test.dir/PropertyManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyManager_test.dir/PropertyManager_test.C.o -o ../bin/TEST/PropertyManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target PropertyManager_test make -f test/CMakeFiles/Factory_test_autogen.dir/build.make test/CMakeFiles/Factory_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Factory_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Factory_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Factory_test_autogen.dir/build.make test/CMakeFiles/Factory_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target Factory_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Factory_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target Factory_test_autogen make -f test/CMakeFiles/Factory_test.dir/build.make test/CMakeFiles/Factory_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Factory_test.dir/DependInfo.cmake --color= Scanning dependencies of target Factory_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Factory_test.dir/build.make test/CMakeFiles/Factory_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Factory_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Factory_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/Factory_test.dir/Factory_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Factory_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Factory_test.dir/Factory_test.C.o -c /<>/test/Factory_test.C [ 50%] Linking CXX executable ../bin/TEST/Factory_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Factory_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Factory_test.dir/Factory_test_autogen/mocs_compilation.cpp.o CMakeFiles/Factory_test.dir/Factory_test.C.o -o ../bin/TEST/Factory_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target 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-I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AutoDeletable_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AutoDeletable_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o -c /<>/test/AutoDeletable_test.C [ 50%] Linking CXX executable ../bin/TEST/AutoDeletable_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoDeletable_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test_autogen/mocs_compilation.cpp.o CMakeFiles/AutoDeletable_test.dir/AutoDeletable_test.C.o -o ../bin/TEST/AutoDeletable_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target AutoDeletable_test make -f test/CMakeFiles/StandardPredicates_test1_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test1_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target StandardPredicates_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StandardPredicates_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target StandardPredicates_test1_autogen make -f test/CMakeFiles/StandardPredicates_test1.dir/build.make test/CMakeFiles/StandardPredicates_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test1.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test1.dir/build.make test/CMakeFiles/StandardPredicates_test1.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/StandardPredicates_test1_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o -c /<>/test/StandardPredicates_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test1.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/StandardPredicates_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test1.dir/StandardPredicates_test1.C.o -o ../bin/TEST/StandardPredicates_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target StandardPredicates_test1 make -f test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HaighMallionShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target HaighMallionShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HaighMallionShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target HaighMallionShiftProcessor_test_autogen make -f test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HaighMallionShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target HaighMallionShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build.make test/CMakeFiles/HaighMallionShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HaighMallionShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HaighMallionShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o -c /<>/test/HaighMallionShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/test/HaighMallionShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/HaighMallionShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HaighMallionShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/HaighMallionShiftProcessor_test.dir/HaighMallionShiftProcessor_test.C.o -o ../bin/TEST/HaighMallionShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target HaighMallionShiftProcessor_test make -f test/CMakeFiles/PoseClustering_test3_autogen.dir/build.make test/CMakeFiles/PoseClustering_test3_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test3_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test3_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test3_autogen.dir/build.make test/CMakeFiles/PoseClustering_test3_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target PoseClustering_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PoseClustering_test3_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target PoseClustering_test3_autogen make -f test/CMakeFiles/PoseClustering_test3.dir/build.make test/CMakeFiles/PoseClustering_test3.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test3.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test3 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test3.dir/build.make test/CMakeFiles/PoseClustering_test3.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o -c /<>/build/test/PoseClustering_test3_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o -c /<>/test/PoseClustering_test3.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test3.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/PoseClustering_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test3.dir/PoseClustering_test3.C.o -o ../bin/TEST/PoseClustering_test3 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target PoseClustering_test3 make -f test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeCompositeIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target CompositeCompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target CompositeCompositeIteratorTraits_test_autogen make -f test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeCompositeIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeCompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeCompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o -c /<>/test/CompositeCompositeIteratorTraits_test.C [ 50%] Linking CXX executable ../bin/TEST/CompositeCompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeCompositeIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeCompositeIteratorTraits_test.dir/CompositeCompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeCompositeIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target CompositeCompositeIteratorTraits_test make -f test/CMakeFiles/PoseClustering_test1_autogen.dir/build.make test/CMakeFiles/PoseClustering_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test1_autogen.dir/build.make test/CMakeFiles/PoseClustering_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target PoseClustering_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PoseClustering_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target PoseClustering_test1_autogen make -f test/CMakeFiles/PoseClustering_test1.dir/build.make test/CMakeFiles/PoseClustering_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoseClustering_test1.dir/DependInfo.cmake --color= Scanning dependencies of target PoseClustering_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoseClustering_test1.dir/build.make test/CMakeFiles/PoseClustering_test1.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/PoseClustering_test1_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoseClustering_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o -c /<>/test/PoseClustering_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/test/PoseClustering_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/PoseClustering_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseClustering_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1_autogen/mocs_compilation.cpp.o CMakeFiles/PoseClustering_test1.dir/PoseClustering_test1.C.o -o ../bin/TEST/PoseClustering_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target PoseClustering_test1 make -f test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectivityDescriptors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target ConnectivityDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConnectivityDescriptors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target ConnectivityDescriptors_test_autogen make -f test/CMakeFiles/ConnectivityDescriptors_test.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectivityDescriptors_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectivityDescriptors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectivityDescriptors_test.dir/build.make test/CMakeFiles/ConnectivityDescriptors_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectivityDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectivityDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o -c /<>/test/ConnectivityDescriptors_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/test/ConnectivityDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/ConnectivityDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectivityDescriptors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectivityDescriptors_test.dir/ConnectivityDescriptors_test.C.o -o ../bin/TEST/ConnectivityDescriptors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target ConnectivityDescriptors_test make -f test/CMakeFiles/RegularData2D_test2_autogen.dir/build.make test/CMakeFiles/RegularData2D_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData2D_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData2D_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData2D_test2_autogen.dir/build.make test/CMakeFiles/RegularData2D_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target RegularData2D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData2D_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target RegularData2D_test2_autogen make -f test/CMakeFiles/RegularData2D_test2.dir/build.make test/CMakeFiles/RegularData2D_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData2D_test2.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData2D_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData2D_test2.dir/build.make test/CMakeFiles/RegularData2D_test2.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData2D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData2D_test2_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData2D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o -c /<>/test/RegularData2D_test2.C [ 50%] Linking CXX executable ../bin/TEST/RegularData2D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData2D_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData2D_test2.dir/RegularData2D_test2.C.o -o ../bin/TEST/RegularData2D_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target RegularData2D_test2 make -f test/CMakeFiles/SurfaceModel_test_autogen.dir/build.make test/CMakeFiles/SurfaceModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceModel_test_autogen.dir/build.make test/CMakeFiles/SurfaceModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target SurfaceModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SurfaceModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target SurfaceModel_test_autogen make -f test/CMakeFiles/SurfaceModel_test.dir/build.make test/CMakeFiles/SurfaceModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceModel_test.dir/build.make test/CMakeFiles/SurfaceModel_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/SurfaceModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SurfaceModel_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/SurfaceModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o -c /<>/test/SurfaceModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/SurfaceModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/TEST/SurfaceModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceModel_test.dir/SurfaceModel_test.C.o -o ../bin/TEST/SurfaceModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 50%] Built target SurfaceModel_test make -f test/CMakeFiles/RegularData2D_test1_autogen.dir/build.make test/CMakeFiles/RegularData2D_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData2D_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData2D_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData2D_test1_autogen.dir/build.make test/CMakeFiles/RegularData2D_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target RegularData2D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData2D_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target RegularData2D_test1_autogen make -f test/CMakeFiles/RegularData2D_test1.dir/build.make test/CMakeFiles/RegularData2D_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData2D_test1.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData2D_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData2D_test1.dir/build.make test/CMakeFiles/RegularData2D_test1.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData2D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData2D_test1_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData2D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o -c /<>/test/RegularData2D_test1.C [ 50%] Linking CXX executable ../bin/TEST/RegularData2D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData2D_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData2D_test1.dir/RegularData2D_test1.C.o -o ../bin/TEST/RegularData2D_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target RegularData2D_test1 make -f test/CMakeFiles/ExpressionTree_test_autogen.dir/build.make test/CMakeFiles/ExpressionTree_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionTree_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionTree_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionTree_test_autogen.dir/build.make test/CMakeFiles/ExpressionTree_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target ExpressionTree_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ExpressionTree_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target ExpressionTree_test_autogen make -f test/CMakeFiles/ExpressionTree_test.dir/build.make test/CMakeFiles/ExpressionTree_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionTree_test.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionTree_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionTree_test.dir/build.make test/CMakeFiles/ExpressionTree_test.dir/build make[5]: Entering directory '/<>/build' [ 50%] Building CXX object test/CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionTree_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ExpressionTree_test_autogen/mocs_compilation.cpp [ 50%] Building CXX object test/CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionTree_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o -c /<>/test/ExpressionTree_test.C [ 50%] Linking CXX executable ../bin/TEST/ExpressionTree_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionTree_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionTree_test.dir/ExpressionTree_test.C.o -o ../bin/TEST/ExpressionTree_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 50%] Built target ExpressionTree_test make -f test/CMakeFiles/Triple_test_autogen.dir/build.make test/CMakeFiles/Triple_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Triple_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Triple_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Triple_test_autogen.dir/build.make test/CMakeFiles/Triple_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 50%] Automatic MOC for target Triple_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Triple_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 50%] Built target Triple_test_autogen make -f test/CMakeFiles/Triple_test.dir/build.make test/CMakeFiles/Triple_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Triple_test.dir/DependInfo.cmake --color= Scanning dependencies of target Triple_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Triple_test.dir/build.make test/CMakeFiles/Triple_test.dir/build make[5]: Entering directory '/<>/build' [ 51%] Building CXX object test/CMakeFiles/Triple_test.dir/Triple_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Triple_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Triple_test.dir/Triple_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Triple_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/Triple_test.dir/Triple_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Triple_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Triple_test.dir/Triple_test.C.o -c /<>/test/Triple_test.C [ 51%] Linking CXX executable ../bin/TEST/Triple_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Triple_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Triple_test.dir/Triple_test_autogen/mocs_compilation.cpp.o CMakeFiles/Triple_test.dir/Triple_test.C.o -o ../bin/TEST/Triple_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target 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test/CMakeFiles/PersistentObject_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PersistentObject_test.dir/DependInfo.cmake --color= Scanning dependencies of target PersistentObject_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PersistentObject_test.dir/build.make test/CMakeFiles/PersistentObject_test.dir/build make[5]: Entering directory '/<>/build' [ 51%] Building CXX object test/CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PersistentObject_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PersistentObject_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PersistentObject_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o -c /<>/test/PersistentObject_test.C [ 51%] Linking CXX executable ../bin/TEST/PersistentObject_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PersistentObject_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PersistentObject_test.dir/PersistentObject_test_autogen/mocs_compilation.cpp.o CMakeFiles/PersistentObject_test.dir/PersistentObject_test.C.o -o ../bin/TEST/PersistentObject_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target PersistentObject_test make -f test/CMakeFiles/Substring_test_autogen.dir/build.make test/CMakeFiles/Substring_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Substring_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Substring_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Substring_test_autogen.dir/build.make test/CMakeFiles/Substring_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 51%] Automatic MOC for target Substring_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Substring_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 51%] 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-DQT_XML_LIB -I/<>/build/test/Substring_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Substring_test.dir/Substring_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Substring_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/Substring_test.dir/Substring_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Substring_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Substring_test.dir/Substring_test.C.o -c /<>/test/Substring_test.C [ 51%] Linking CXX executable ../bin/TEST/Substring_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Substring_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Substring_test.dir/Substring_test_autogen/mocs_compilation.cpp.o CMakeFiles/Substring_test.dir/Substring_test.C.o -o ../bin/TEST/Substring_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target Substring_test make -f test/CMakeFiles/String_test4_autogen.dir/build.make test/CMakeFiles/String_test4_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test4_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test4_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test4_autogen.dir/build.make test/CMakeFiles/String_test4_autogen.dir/build make[5]: Entering directory '/<>/build' [ 51%] Automatic MOC for target String_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test4_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 51%] Built target String_test4_autogen make -f test/CMakeFiles/String_test4.dir/build.make test/CMakeFiles/String_test4.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test4.dir/DependInfo.cmake --color= Scanning dependencies of target String_test4 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test4.dir/build.make test/CMakeFiles/String_test4.dir/build make[5]: Entering directory '/<>/build' [ 51%] Building CXX object test/CMakeFiles/String_test4.dir/String_test4_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test4.dir/String_test4_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test4_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/String_test4.dir/String_test4.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test4.dir/String_test4.C.o -c /<>/test/String_test4.C [ 51%] Linking CXX executable ../bin/TEST/String_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test4.dir/String_test4_autogen/mocs_compilation.cpp.o CMakeFiles/String_test4.dir/String_test4.C.o -o ../bin/TEST/String_test4 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target String_test4 make -f test/CMakeFiles/ParameterSection_test_autogen.dir/build.make test/CMakeFiles/ParameterSection_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ParameterSection_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ParameterSection_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ParameterSection_test_autogen.dir/build.make test/CMakeFiles/ParameterSection_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 51%] Automatic MOC for target ParameterSection_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ParameterSection_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 51%] Built target ParameterSection_test_autogen make -f test/CMakeFiles/ParameterSection_test.dir/build.make test/CMakeFiles/ParameterSection_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test 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-isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ParameterSection_test.dir/ParameterSection_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ParameterSection_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ParameterSection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o -c /<>/test/ParameterSection_test.C [ 51%] Linking CXX executable ../bin/TEST/ParameterSection_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParameterSection_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ParameterSection_test.dir/ParameterSection_test_autogen/mocs_compilation.cpp.o CMakeFiles/ParameterSection_test.dir/ParameterSection_test.C.o -o ../bin/TEST/ParameterSection_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target ParameterSection_test make -f test/CMakeFiles/Sphere3_test_autogen.dir/build.make test/CMakeFiles/Sphere3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Sphere3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Sphere3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Sphere3_test_autogen.dir/build.make test/CMakeFiles/Sphere3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 51%] Automatic MOC for target Sphere3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Sphere3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 51%] Built target Sphere3_test_autogen make -f test/CMakeFiles/Sphere3_test.dir/build.make test/CMakeFiles/Sphere3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix 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/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sphere3_test.dir/Sphere3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Sphere3_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Sphere3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o -c /<>/test/Sphere3_test.C [ 51%] Linking CXX executable ../bin/TEST/Sphere3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Sphere3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Sphere3_test.dir/Sphere3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Sphere3_test.dir/Sphere3_test.C.o -o ../bin/TEST/Sphere3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target Sphere3_test make -f test/CMakeFiles/PartialChargeBase_test_autogen.dir/build.make test/CMakeFiles/PartialChargeBase_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix 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/<>/build/test/CMakeFiles/PartialChargeBase_test.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargeBase_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PartialChargeBase_test.dir/build.make test/CMakeFiles/PartialChargeBase_test.dir/build make[5]: Entering directory '/<>/build' [ 51%] Building CXX object test/CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PartialChargeBase_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PartialChargeBase_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o -c /<>/test/PartialChargeBase_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/test/PartialChargeBase_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 51%] Linking CXX executable ../bin/TEST/PartialChargeBase_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargeBase_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargeBase_test.dir/PartialChargeBase_test.C.o -o ../bin/TEST/PartialChargeBase_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 51%] Built target PartialChargeBase_test make -f test/CMakeFiles/Molecule_test_autogen.dir/build.make test/CMakeFiles/Molecule_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Molecule_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Molecule_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Molecule_test_autogen.dir/build.make test/CMakeFiles/Molecule_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 51%] Automatic MOC for target Molecule_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Molecule_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 51%] Built target Molecule_test_autogen make -f test/CMakeFiles/Molecule_test.dir/build.make test/CMakeFiles/Molecule_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Molecule_test.dir/DependInfo.cmake --color= Scanning dependencies of target Molecule_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Molecule_test.dir/build.make test/CMakeFiles/Molecule_test.dir/build make[5]: Entering directory '/<>/build' [ 51%] Building CXX object test/CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Molecule_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Molecule_test_autogen/mocs_compilation.cpp [ 51%] Building CXX object test/CMakeFiles/Molecule_test.dir/Molecule_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Molecule_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Molecule_test.dir/Molecule_test.C.o -c /<>/test/Molecule_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/Molecule_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Molecule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/Molecule_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Molecule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/Molecule_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Molecule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 52%] Linking CXX executable ../bin/TEST/Molecule_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Molecule_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Molecule_test.dir/Molecule_test_autogen/mocs_compilation.cpp.o CMakeFiles/Molecule_test.dir/Molecule_test.C.o -o ../bin/TEST/Molecule_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 52%] Built target Molecule_test make -f test/CMakeFiles/Composite_test2_autogen.dir/build.make test/CMakeFiles/Composite_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test2_autogen.dir/build.make test/CMakeFiles/Composite_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 52%] Automatic MOC for target Composite_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 52%] Built target Composite_test2_autogen make -f test/CMakeFiles/Composite_test2.dir/build.make test/CMakeFiles/Composite_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test2.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test2.dir/build.make test/CMakeFiles/Composite_test2.dir/build make[5]: Entering directory '/<>/build' [ 52%] Building CXX object test/CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test2_autogen/mocs_compilation.cpp [ 53%] Building CXX object test/CMakeFiles/Composite_test2.dir/Composite_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test2.dir/Composite_test2.C.o -c /<>/test/Composite_test2.C /<>/test/Composite_test2.C: In function ‘int main(int, char**)’: /<>/test/Composite_test2.C:29:59: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 29 | sub_it = const_cast(a).beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:50:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 50 | sub_it = const_cast(f).beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:61:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 61 | sub_it = const_cast(h).beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:80:27: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 80 | sub_it = a.endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C: In function ‘int main(int, char**)’: /<>/test/Composite_test2.C:80:27: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 80 | sub_it = a.endComposite(); | ^ /<>/test/Composite_test2.C:111:57: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 111 | sub_it = const_cast(a).endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:305:34: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 305 | sub_it = a.beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C: In function ‘int main(int, char**)’: /<>/test/Composite_test2.C:305:34: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 305 | sub_it = a.beginChildComposite(); | ^ /<>/test/Composite_test2.C:320:33: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 320 | sub_it = f.beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:328:33: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 328 | sub_it = h.beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:344:64: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 344 | sub_it = const_cast(a).beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:359:63: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 359 | sub_it = const_cast(f).beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test2.C:367:63: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 367 | sub_it = const_cast(h).beginChildComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test2.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Linking CXX executable ../bin/TEST/Composite_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test2.dir/Composite_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test2.dir/Composite_test2.C.o -o ../bin/TEST/Composite_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 53%] Built target Composite_test2 make -f test/CMakeFiles/Timer_test_autogen.dir/build.make test/CMakeFiles/Timer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Timer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Timer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Timer_test_autogen.dir/build.make test/CMakeFiles/Timer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 53%] Automatic MOC for target Timer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Timer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 53%] Built target Timer_test_autogen make -f test/CMakeFiles/Timer_test.dir/build.make test/CMakeFiles/Timer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Timer_test.dir/DependInfo.cmake --color= Scanning dependencies of target Timer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Timer_test.dir/build.make test/CMakeFiles/Timer_test.dir/build make[5]: Entering directory '/<>/build' [ 53%] Building CXX object test/CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Timer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Timer_test_autogen/mocs_compilation.cpp [ 53%] Building CXX object test/CMakeFiles/Timer_test.dir/Timer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Timer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Timer_test.dir/Timer_test.C.o -c /<>/test/Timer_test.C [ 53%] Linking CXX executable ../bin/TEST/Timer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Timer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Timer_test.dir/Timer_test_autogen/mocs_compilation.cpp.o CMakeFiles/Timer_test.dir/Timer_test.C.o -o ../bin/TEST/Timer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 53%] Built target Timer_test make -f test/CMakeFiles/StandardPredicates_test4_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test4_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test4_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test4_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test4_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test4_autogen.dir/build make[5]: Entering directory '/<>/build' [ 53%] Automatic MOC for target StandardPredicates_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StandardPredicates_test4_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 53%] Built target StandardPredicates_test4_autogen make -f test/CMakeFiles/StandardPredicates_test4.dir/build.make test/CMakeFiles/StandardPredicates_test4.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test4.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test4 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test4.dir/build.make test/CMakeFiles/StandardPredicates_test4.dir/build make[5]: Entering directory '/<>/build' [ 53%] Building CXX object test/CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o -c /<>/build/test/StandardPredicates_test4_autogen/mocs_compilation.cpp [ 53%] Building CXX object test/CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test4_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o -c /<>/test/StandardPredicates_test4.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test4.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 53%] Linking CXX executable ../bin/TEST/StandardPredicates_test4 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test4.dir/StandardPredicates_test4.C.o -o ../bin/TEST/StandardPredicates_test4 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 53%] Built target StandardPredicates_test4 make -f test/CMakeFiles/SnapShot_test_autogen.dir/build.make test/CMakeFiles/SnapShot_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SnapShot_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SnapShot_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SnapShot_test_autogen.dir/build.make test/CMakeFiles/SnapShot_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 53%] Automatic MOC for target SnapShot_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SnapShot_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 53%] Built target SnapShot_test_autogen make -f test/CMakeFiles/SnapShot_test.dir/build.make test/CMakeFiles/SnapShot_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SnapShot_test.dir/DependInfo.cmake --color= Scanning dependencies of target SnapShot_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SnapShot_test.dir/build.make test/CMakeFiles/SnapShot_test.dir/build make[5]: Entering directory '/<>/build' [ 53%] Building CXX object test/CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SnapShot_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SnapShot_test_autogen/mocs_compilation.cpp [ 53%] Building CXX object test/CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SnapShot_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o -c /<>/test/SnapShot_test.C [ 53%] Linking CXX executable ../bin/TEST/SnapShot_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SnapShot_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SnapShot_test.dir/SnapShot_test_autogen/mocs_compilation.cpp.o CMakeFiles/SnapShot_test.dir/SnapShot_test.C.o -o ../bin/TEST/SnapShot_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 53%] Built target SnapShot_test make -f test/CMakeFiles/PiecewiseFunction_test_autogen.dir/build.make test/CMakeFiles/PiecewiseFunction_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PiecewiseFunction_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PiecewiseFunction_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PiecewiseFunction_test_autogen.dir/build.make test/CMakeFiles/PiecewiseFunction_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 54%] Automatic MOC for target PiecewiseFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PiecewiseFunction_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 54%] Built target PiecewiseFunction_test_autogen make -f test/CMakeFiles/PiecewiseFunction_test.dir/build.make test/CMakeFiles/PiecewiseFunction_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PiecewiseFunction_test.dir/DependInfo.cmake --color= Scanning dependencies of target PiecewiseFunction_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PiecewiseFunction_test.dir/build.make test/CMakeFiles/PiecewiseFunction_test.dir/build make[5]: Entering directory '/<>/build' [ 54%] Building CXX object test/CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PiecewiseFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PiecewiseFunction_test_autogen/mocs_compilation.cpp [ 54%] Building CXX object test/CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PiecewiseFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o -c /<>/test/PiecewiseFunction_test.C [ 54%] Linking CXX executable ../bin/TEST/PiecewiseFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PiecewiseFunction_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/PiecewiseFunction_test.dir/PiecewiseFunction_test.C.o -o ../bin/TEST/PiecewiseFunction_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 54%] Built target PiecewiseFunction_test make -f test/CMakeFiles/Line3_test_autogen.dir/build.make test/CMakeFiles/Line3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Line3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Line3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Line3_test_autogen.dir/build.make test/CMakeFiles/Line3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 54%] Automatic MOC for target Line3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Line3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 54%] Built target Line3_test_autogen make -f test/CMakeFiles/Line3_test.dir/build.make test/CMakeFiles/Line3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Line3_test.dir/DependInfo.cmake --color= Scanning dependencies of target Line3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Line3_test.dir/build.make test/CMakeFiles/Line3_test.dir/build make[5]: Entering directory '/<>/build' [ 54%] Building CXX object test/CMakeFiles/Line3_test.dir/Line3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Line3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Line3_test.dir/Line3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Line3_test_autogen/mocs_compilation.cpp [ 54%] Building CXX object test/CMakeFiles/Line3_test.dir/Line3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK 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-fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Line3_test.dir/Line3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Line3_test.dir/Line3_test.C.o -o ../bin/TEST/Line3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread 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-DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleBox3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test.C.o -c /<>/test/SimpleBox3_test.C [ 54%] Linking CXX executable ../bin/TEST/SimpleBox3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleBox3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleBox3_test.dir/SimpleBox3_test.C.o -o ../bin/TEST/SimpleBox3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 54%] Built target SimpleBox3_test make -f 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/usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quadruple_test.dir/Quadruple_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Quadruple_test_autogen/mocs_compilation.cpp [ 55%] Building CXX object test/CMakeFiles/Quadruple_test.dir/Quadruple_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Quadruple_test_autogen/include -I/<>/include 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test/CMakeFiles/StandardPredicates_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test2_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 55%] Automatic MOC for target StandardPredicates_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StandardPredicates_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 55%] Built target StandardPredicates_test2_autogen make -f test/CMakeFiles/StandardPredicates_test2.dir/build.make test/CMakeFiles/StandardPredicates_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test2.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test2.dir/build.make test/CMakeFiles/StandardPredicates_test2.dir/build make[5]: Entering directory '/<>/build' [ 55%] Building CXX object test/CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/StandardPredicates_test2_autogen/mocs_compilation.cpp [ 56%] Building CXX object test/CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o -c /<>/test/StandardPredicates_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test2.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 56%] Linking CXX executable ../bin/TEST/StandardPredicates_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test2.dir/StandardPredicates_test2.C.o -o ../bin/TEST/StandardPredicates_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 56%] Built target StandardPredicates_test2 make -f test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build.make test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PoissonBoltzmann_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build.make test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 56%] Automatic MOC for target PoissonBoltzmann_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PoissonBoltzmann_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 56%] Built target PoissonBoltzmann_test_autogen make -f test/CMakeFiles/PoissonBoltzmann_test.dir/build.make test/CMakeFiles/PoissonBoltzmann_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PoissonBoltzmann_test.dir/DependInfo.cmake --color= Scanning dependencies of target PoissonBoltzmann_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PoissonBoltzmann_test.dir/build.make test/CMakeFiles/PoissonBoltzmann_test.dir/build make[5]: Entering directory '/<>/build' [ 56%] Building CXX object test/CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoissonBoltzmann_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PoissonBoltzmann_test_autogen/mocs_compilation.cpp [ 56%] Building CXX object test/CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PoissonBoltzmann_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o -c /<>/test/PoissonBoltzmann_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17, from /<>/test/PoissonBoltzmann_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 58%] Linking CXX executable ../bin/TEST/PoissonBoltzmann_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoissonBoltzmann_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test_autogen/mocs_compilation.cpp.o CMakeFiles/PoissonBoltzmann_test.dir/PoissonBoltzmann_test.C.o -o ../bin/TEST/PoissonBoltzmann_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 58%] Built target PoissonBoltzmann_test make -f test/CMakeFiles/String_test6_autogen.dir/build.make test/CMakeFiles/String_test6_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test6_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test6_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test6_autogen.dir/build.make test/CMakeFiles/String_test6_autogen.dir/build make[5]: Entering directory '/<>/build' [ 58%] Automatic MOC for target String_test6 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test6_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 58%] Built target String_test6_autogen make -f test/CMakeFiles/String_test6.dir/build.make test/CMakeFiles/String_test6.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test6.dir/DependInfo.cmake --color= Scanning dependencies of target String_test6 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test6.dir/build.make test/CMakeFiles/String_test6.dir/build make[5]: Entering directory '/<>/build' [ 59%] Building CXX object test/CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test6_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test6_autogen/mocs_compilation.cpp [ 59%] Building CXX object test/CMakeFiles/String_test6.dir/String_test6.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test6_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test6.dir/String_test6.C.o -c /<>/test/String_test6.C [ 59%] Linking CXX executable ../bin/TEST/String_test6 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test6.dir/String_test6_autogen/mocs_compilation.cpp.o CMakeFiles/String_test6.dir/String_test6.C.o -o ../bin/TEST/String_test6 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 59%] Built target String_test6 make -f test/CMakeFiles/String_test7_autogen.dir/build.make test/CMakeFiles/String_test7_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test7_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test7_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test7_autogen.dir/build.make test/CMakeFiles/String_test7_autogen.dir/build make[5]: Entering directory '/<>/build' [ 59%] Automatic MOC for target String_test7 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test7_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 59%] Built target String_test7_autogen make -f test/CMakeFiles/String_test7.dir/build.make test/CMakeFiles/String_test7.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test7.dir/DependInfo.cmake --color= Scanning dependencies of target String_test7 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test7.dir/build.make test/CMakeFiles/String_test7.dir/build make[5]: Entering directory '/<>/build' [ 59%] Building CXX object test/CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test7_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test7_autogen/mocs_compilation.cpp [ 59%] Building CXX object test/CMakeFiles/String_test7.dir/String_test7.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test7_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test7.dir/String_test7.C.o -c /<>/test/String_test7.C /<>/test/String_test7.C: In function ‘int main(int, char**)’: /<>/test/String_test7.C:22:9: warning: unused variable ‘s2’ [-Wunused-variable] 22 | String* s2; | ^~ [ 59%] Linking CXX executable ../bin/TEST/String_test7 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test7.dir/String_test7_autogen/mocs_compilation.cpp.o CMakeFiles/String_test7.dir/String_test7.C.o -o ../bin/TEST/String_test7 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 59%] Built target String_test7 make -f test/CMakeFiles/RingAnalyser_test_autogen.dir/build.make test/CMakeFiles/RingAnalyser_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RingAnalyser_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RingAnalyser_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RingAnalyser_test_autogen.dir/build.make test/CMakeFiles/RingAnalyser_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 59%] Automatic MOC for target RingAnalyser_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RingAnalyser_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 59%] Built target RingAnalyser_test_autogen make -f test/CMakeFiles/RingAnalyser_test.dir/build.make test/CMakeFiles/RingAnalyser_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RingAnalyser_test.dir/DependInfo.cmake --color= Scanning dependencies of target RingAnalyser_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RingAnalyser_test.dir/build.make test/CMakeFiles/RingAnalyser_test.dir/build make[5]: Entering directory '/<>/build' [ 59%] Building CXX object test/CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RingAnalyser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RingAnalyser_test_autogen/mocs_compilation.cpp [ 59%] Building CXX object test/CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RingAnalyser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o -c /<>/test/RingAnalyser_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/test/RingAnalyser_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 59%] Linking CXX executable ../bin/TEST/RingAnalyser_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RingAnalyser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test_autogen/mocs_compilation.cpp.o CMakeFiles/RingAnalyser_test.dir/RingAnalyser_test.C.o -o ../bin/TEST/RingAnalyser_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 59%] Built target RingAnalyser_test make -f test/CMakeFiles/Box3_test_autogen.dir/build.make test/CMakeFiles/Box3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Box3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Box3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Box3_test_autogen.dir/build.make test/CMakeFiles/Box3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 59%] Automatic MOC for target Box3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Box3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 59%] Built target Box3_test_autogen make -f test/CMakeFiles/Box3_test.dir/build.make test/CMakeFiles/Box3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Box3_test.dir/DependInfo.cmake --color= Scanning dependencies of target Box3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Box3_test.dir/build.make test/CMakeFiles/Box3_test.dir/build make[5]: Entering directory '/<>/build' [ 59%] Building CXX object test/CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Box3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Box3_test_autogen/mocs_compilation.cpp [ 59%] Building CXX object test/CMakeFiles/Box3_test.dir/Box3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Box3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Box3_test.dir/Box3_test.C.o -c /<>/test/Box3_test.C [ 59%] Linking CXX executable ../bin/TEST/Box3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Box3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Box3_test.dir/Box3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Box3_test.dir/Box3_test.C.o -o ../bin/TEST/Box3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 59%] Built target Box3_test make -f test/CMakeFiles/Atom_test1_autogen.dir/build.make test/CMakeFiles/Atom_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Atom_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Atom_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Atom_test1_autogen.dir/build.make test/CMakeFiles/Atom_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 59%] Automatic MOC for target Atom_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Atom_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 59%] Built target Atom_test1_autogen make -f test/CMakeFiles/Atom_test1.dir/build.make test/CMakeFiles/Atom_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Atom_test1.dir/DependInfo.cmake --color= Scanning dependencies of target Atom_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Atom_test1.dir/build.make test/CMakeFiles/Atom_test1.dir/build make[5]: Entering directory '/<>/build' [ 60%] Building CXX object test/CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Atom_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/Atom_test1_autogen/mocs_compilation.cpp [ 60%] Building CXX object test/CMakeFiles/Atom_test1.dir/Atom_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Atom_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test1.dir/Atom_test1.C.o -c /<>/test/Atom_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 60%] Linking CXX executable ../bin/TEST/Atom_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Atom_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Atom_test1.dir/Atom_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Atom_test1.dir/Atom_test1.C.o -o ../bin/TEST/Atom_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 60%] Built target Atom_test1 make -f test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build.make test/CMakeFiles/NumericalIntegrator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NumericalIntegrator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NumericalIntegrator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build.make test/CMakeFiles/NumericalIntegrator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 60%] Automatic MOC for target NumericalIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NumericalIntegrator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 60%] Built target NumericalIntegrator_test_autogen make -f test/CMakeFiles/NumericalIntegrator_test.dir/build.make test/CMakeFiles/NumericalIntegrator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NumericalIntegrator_test.dir/DependInfo.cmake --color= Scanning dependencies of target NumericalIntegrator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NumericalIntegrator_test.dir/build.make test/CMakeFiles/NumericalIntegrator_test.dir/build make[5]: Entering directory '/<>/build' [ 60%] Building CXX object test/CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NumericalIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NumericalIntegrator_test_autogen/mocs_compilation.cpp [ 60%] Building CXX object test/CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NumericalIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o -c /<>/test/NumericalIntegrator_test.C [ 60%] Linking CXX executable ../bin/TEST/NumericalIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumericalIntegrator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/NumericalIntegrator_test.dir/NumericalIntegrator_test.C.o -o ../bin/TEST/NumericalIntegrator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 60%] Built target NumericalIntegrator_test make -f test/CMakeFiles/PeptideBuilder_test_autogen.dir/build.make test/CMakeFiles/PeptideBuilder_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeptideBuilder_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideBuilder_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeptideBuilder_test_autogen.dir/build.make test/CMakeFiles/PeptideBuilder_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 60%] Automatic MOC for target PeptideBuilder_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PeptideBuilder_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 60%] Built target PeptideBuilder_test_autogen make -f test/CMakeFiles/PeptideBuilder_test.dir/build.make test/CMakeFiles/PeptideBuilder_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeptideBuilder_test.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideBuilder_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeptideBuilder_test.dir/build.make test/CMakeFiles/PeptideBuilder_test.dir/build make[5]: Entering directory '/<>/build' [ 61%] Building CXX object test/CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeptideBuilder_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PeptideBuilder_test_autogen/mocs_compilation.cpp [ 61%] Building CXX object test/CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeptideBuilder_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o -c /<>/test/PeptideBuilder_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/PeptideBuilder_test.C: In function ‘int main(int, char**)’: /<>/test/PeptideBuilder_test.C:160:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 160 | res_it = prot->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PeptideBuilder_test.C: In function ‘int main(int, char**)’: /<>/test/PeptideBuilder_test.C:160:30: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 160 | res_it = prot->beginResidue(); | ^ /<>/test/PeptideBuilder_test.C:183:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 183 | res_it = prot->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/PeptideBuilder_test.C:202:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 202 | res_it = prot->beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/test/PeptideBuilder_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 61%] Linking CXX executable ../bin/TEST/PeptideBuilder_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideBuilder_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideBuilder_test.dir/PeptideBuilder_test.C.o -o ../bin/TEST/PeptideBuilder_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 61%] Built target PeptideBuilder_test make -f test/CMakeFiles/Matrix44_test1_autogen.dir/build.make test/CMakeFiles/Matrix44_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Matrix44_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Matrix44_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Matrix44_test1_autogen.dir/build.make test/CMakeFiles/Matrix44_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 62%] Automatic MOC for target Matrix44_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Matrix44_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 62%] Built target Matrix44_test1_autogen make -f test/CMakeFiles/Matrix44_test1.dir/build.make test/CMakeFiles/Matrix44_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Matrix44_test1.dir/DependInfo.cmake --color= Scanning dependencies of target Matrix44_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Matrix44_test1.dir/build.make test/CMakeFiles/Matrix44_test1.dir/build make[5]: Entering directory '/<>/build' [ 62%] Building CXX object test/CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Matrix44_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/Matrix44_test1_autogen/mocs_compilation.cpp [ 62%] Building CXX object test/CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Matrix44_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o -c /<>/test/Matrix44_test1.C [ 62%] Linking CXX executable ../bin/TEST/Matrix44_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Matrix44_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Matrix44_test1.dir/Matrix44_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Matrix44_test1.dir/Matrix44_test1.C.o -o ../bin/TEST/Matrix44_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 62%] Built target Matrix44_test1 make -f test/CMakeFiles/SecondaryStructure_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructure_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SecondaryStructure_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SecondaryStructure_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SecondaryStructure_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructure_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 62%] Automatic MOC for target SecondaryStructure_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SecondaryStructure_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 62%] Built target SecondaryStructure_test_autogen make -f test/CMakeFiles/SecondaryStructure_test.dir/build.make test/CMakeFiles/SecondaryStructure_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SecondaryStructure_test.dir/DependInfo.cmake --color= Scanning dependencies of target SecondaryStructure_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SecondaryStructure_test.dir/build.make test/CMakeFiles/SecondaryStructure_test.dir/build make[5]: Entering directory '/<>/build' [ 62%] Building CXX object test/CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SecondaryStructure_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SecondaryStructure_test_autogen/mocs_compilation.cpp [ 62%] Building CXX object test/CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SecondaryStructure_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o -c /<>/test/SecondaryStructure_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/SecondaryStructure_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 63%] Linking CXX executable ../bin/TEST/SecondaryStructure_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SecondaryStructure_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test_autogen/mocs_compilation.cpp.o CMakeFiles/SecondaryStructure_test.dir/SecondaryStructure_test.C.o -o ../bin/TEST/SecondaryStructure_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target SecondaryStructure_test make -f test/CMakeFiles/Hash_test_autogen.dir/build.make test/CMakeFiles/Hash_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Hash_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Hash_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Hash_test_autogen.dir/build.make test/CMakeFiles/Hash_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target Hash_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Hash_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target Hash_test_autogen make -f test/CMakeFiles/Hash_test.dir/build.make test/CMakeFiles/Hash_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Hash_test.dir/DependInfo.cmake --color= Scanning dependencies of target Hash_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Hash_test.dir/build.make test/CMakeFiles/Hash_test.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Hash_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Hash_test_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/Hash_test.dir/Hash_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Hash_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Hash_test.dir/Hash_test.C.o -c /<>/test/Hash_test.C /<>/test/Hash_test.C: In function ‘int main(int, char**)’: /<>/test/Hash_test.C:17:11: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 17 | char* c = "abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789"; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 63%] Linking CXX executable ../bin/TEST/Hash_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Hash_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Hash_test.dir/Hash_test_autogen/mocs_compilation.cpp.o CMakeFiles/Hash_test.dir/Hash_test.C.o -o ../bin/TEST/Hash_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target Hash_test make -f test/CMakeFiles/Selector_test_autogen.dir/build.make test/CMakeFiles/Selector_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Selector_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Selector_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Selector_test_autogen.dir/build.make test/CMakeFiles/Selector_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target Selector_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Selector_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target Selector_test_autogen make -f test/CMakeFiles/Selector_test.dir/build.make test/CMakeFiles/Selector_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Selector_test.dir/DependInfo.cmake --color= Scanning dependencies of target Selector_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Selector_test.dir/build.make test/CMakeFiles/Selector_test.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Selector_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Selector_test_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/Selector_test.dir/Selector_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Selector_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selector_test.dir/Selector_test.C.o -c /<>/test/Selector_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/Selector_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/KERNEL/selector.h:11, from /<>/test/Selector_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/Selector_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/KERNEL/selector.h:11, from /<>/test/Selector_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/Selector_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/KERNEL/selector.h:11, from /<>/test/Selector_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 63%] Linking CXX executable ../bin/TEST/Selector_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selector_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Selector_test.dir/Selector_test_autogen/mocs_compilation.cpp.o CMakeFiles/Selector_test.dir/Selector_test.C.o -o ../bin/TEST/Selector_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target Selector_test make -f test/CMakeFiles/RegularData3D_test2_autogen.dir/build.make test/CMakeFiles/RegularData3D_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData3D_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData3D_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData3D_test2_autogen.dir/build.make test/CMakeFiles/RegularData3D_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target RegularData3D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData3D_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target RegularData3D_test2_autogen make -f test/CMakeFiles/RegularData3D_test2.dir/build.make test/CMakeFiles/RegularData3D_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData3D_test2.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData3D_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData3D_test2.dir/build.make test/CMakeFiles/RegularData3D_test2.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData3D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData3D_test2_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData3D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o -c /<>/test/RegularData3D_test2.C /<>/test/RegularData3D_test2.C: In function ‘int main(int, char**)’: /<>/test/RegularData3D_test2.C:18:16: warning: unused variable ‘grid’ [-Wunused-variable] 18 | RegularData3D* grid; | ^~~~ [ 63%] Linking CXX executable ../bin/TEST/RegularData3D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData3D_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData3D_test2.dir/RegularData3D_test2.C.o -o ../bin/TEST/RegularData3D_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target RegularData3D_test2 make -f test/CMakeFiles/LineSearch_test_autogen.dir/build.make test/CMakeFiles/LineSearch_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineSearch_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LineSearch_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineSearch_test_autogen.dir/build.make test/CMakeFiles/LineSearch_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target LineSearch_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LineSearch_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target LineSearch_test_autogen make -f test/CMakeFiles/LineSearch_test.dir/build.make test/CMakeFiles/LineSearch_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineSearch_test.dir/DependInfo.cmake --color= Scanning dependencies of target LineSearch_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineSearch_test.dir/build.make test/CMakeFiles/LineSearch_test.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LineSearch_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/LineSearch_test_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LineSearch_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o -c /<>/test/LineSearch_test.C [ 63%] Linking CXX executable ../bin/TEST/LineSearch_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineSearch_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineSearch_test.dir/LineSearch_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineSearch_test.dir/LineSearch_test.C.o -o ../bin/TEST/LineSearch_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target LineSearch_test make -f test/CMakeFiles/String_test1_autogen.dir/build.make test/CMakeFiles/String_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test1_autogen.dir/build.make test/CMakeFiles/String_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target String_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target String_test1_autogen make -f test/CMakeFiles/String_test1.dir/build.make test/CMakeFiles/String_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test1.dir/DependInfo.cmake --color= Scanning dependencies of target String_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test1.dir/build.make test/CMakeFiles/String_test1.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test1_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/String_test1.dir/String_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test1.dir/String_test1.C.o -c /<>/test/String_test1.C [ 63%] Linking CXX executable ../bin/TEST/String_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test1.dir/String_test1_autogen/mocs_compilation.cpp.o CMakeFiles/String_test1.dir/String_test1.C.o -o ../bin/TEST/String_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 63%] Built target String_test1 make -f test/CMakeFiles/LineModel_test_autogen.dir/build.make test/CMakeFiles/LineModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LineModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineModel_test_autogen.dir/build.make test/CMakeFiles/LineModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 63%] Automatic MOC for target LineModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LineModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 63%] Built target LineModel_test_autogen make -f test/CMakeFiles/LineModel_test.dir/build.make test/CMakeFiles/LineModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target LineModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineModel_test.dir/build.make test/CMakeFiles/LineModel_test.dir/build make[5]: Entering directory '/<>/build' [ 63%] Building CXX object test/CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/LineModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/LineModel_test_autogen/mocs_compilation.cpp [ 63%] Building CXX object test/CMakeFiles/LineModel_test.dir/LineModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/LineModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineModel_test.dir/LineModel_test.C.o -c /<>/test/LineModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LineModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LineModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LineModel_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/LineModel_test.C:8: /<>/test/LineModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/LineModel_test.C:48:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 48 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/LineModel_test.C:8: /<>/test/LineModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:141:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/LineModel_test.C:48:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 48 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/LineModel_test.C:48:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 48 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/LineModel_test.C:7: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/LineModel_test.C:8: /<>/test/LineModel_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/LineModel_test.C:48:1: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 48 | BALL_FOREACH_INTRABOND(system, ait, abit) | ^~~~~~~~~~~~~~~~~~~~~~ [ 63%] Linking CXX executable ../bin/TEST/LineModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineModel_test.dir/LineModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineModel_test.dir/LineModel_test.C.o -o ../bin/TEST/LineModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 63%] Built target LineModel_test make -f test/CMakeFiles/BidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/BidirectionalIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BidirectionalIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BidirectionalIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/BidirectionalIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 65%] Automatic MOC for target BidirectionalIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BidirectionalIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 65%] Built target BidirectionalIterator_test_autogen make -f test/CMakeFiles/BidirectionalIterator_test.dir/build.make test/CMakeFiles/BidirectionalIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BidirectionalIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target BidirectionalIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BidirectionalIterator_test.dir/build.make test/CMakeFiles/BidirectionalIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 65%] Building CXX object test/CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BidirectionalIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BidirectionalIterator_test_autogen/mocs_compilation.cpp [ 65%] Building CXX object test/CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BidirectionalIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o -c /<>/test/BidirectionalIterator_test.C [ 65%] Linking CXX executable ../bin/TEST/BidirectionalIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BidirectionalIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/BidirectionalIterator_test.dir/BidirectionalIterator_test.C.o -o ../bin/TEST/BidirectionalIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 65%] Built target BidirectionalIterator_test make -f test/CMakeFiles/OoiEnergy_test_autogen.dir/build.make test/CMakeFiles/OoiEnergy_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/OoiEnergy_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target OoiEnergy_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/OoiEnergy_test_autogen.dir/build.make test/CMakeFiles/OoiEnergy_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 65%] Automatic MOC for target OoiEnergy_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/OoiEnergy_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 65%] Built target OoiEnergy_test_autogen make -f test/CMakeFiles/OoiEnergy_test.dir/build.make test/CMakeFiles/OoiEnergy_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/OoiEnergy_test.dir/DependInfo.cmake --color= Scanning dependencies of target OoiEnergy_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/OoiEnergy_test.dir/build.make test/CMakeFiles/OoiEnergy_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/OoiEnergy_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/OoiEnergy_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/OoiEnergy_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o -c /<>/test/OoiEnergy_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/OoiEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/test/OoiEnergy_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/OoiEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/test/OoiEnergy_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/OoiEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/test/OoiEnergy_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Linking CXX executable ../bin/TEST/OoiEnergy_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/OoiEnergy_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test_autogen/mocs_compilation.cpp.o CMakeFiles/OoiEnergy_test.dir/OoiEnergy_test.C.o -o ../bin/TEST/OoiEnergy_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target OoiEnergy_test make -f test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build.make test/CMakeFiles/ExpressionPredicate_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionPredicate_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionPredicate_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build.make test/CMakeFiles/ExpressionPredicate_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target ExpressionPredicate_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ExpressionPredicate_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target ExpressionPredicate_test_autogen make -f test/CMakeFiles/ExpressionPredicate_test.dir/build.make test/CMakeFiles/ExpressionPredicate_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionPredicate_test.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionPredicate_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionPredicate_test.dir/build.make test/CMakeFiles/ExpressionPredicate_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionPredicate_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ExpressionPredicate_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionPredicate_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o -c /<>/test/ExpressionPredicate_test.C [ 66%] Linking CXX executable ../bin/TEST/ExpressionPredicate_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionPredicate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionPredicate_test.dir/ExpressionPredicate_test.C.o -o ../bin/TEST/ExpressionPredicate_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target ExpressionPredicate_test make -f test/CMakeFiles/AtomContainer_test2_autogen.dir/build.make test/CMakeFiles/AtomContainer_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomContainer_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomContainer_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomContainer_test2_autogen.dir/build.make test/CMakeFiles/AtomContainer_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target AtomContainer_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomContainer_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target AtomContainer_test2_autogen make -f test/CMakeFiles/AtomContainer_test2.dir/build.make test/CMakeFiles/AtomContainer_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomContainer_test2.dir/DependInfo.cmake --color= Scanning dependencies of target AtomContainer_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomContainer_test2.dir/build.make test/CMakeFiles/AtomContainer_test2.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomContainer_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomContainer_test2_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomContainer_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o -c /<>/test/AtomContainer_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 66%] Linking CXX executable ../bin/TEST/AtomContainer_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomContainer_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2_autogen/mocs_compilation.cpp.o CMakeFiles/AtomContainer_test2.dir/AtomContainer_test2.C.o -o ../bin/TEST/AtomContainer_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target AtomContainer_test2 make -f test/CMakeFiles/GlobalKernel_test_autogen.dir/build.make test/CMakeFiles/GlobalKernel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GlobalKernel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GlobalKernel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GlobalKernel_test_autogen.dir/build.make test/CMakeFiles/GlobalKernel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target GlobalKernel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/GlobalKernel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target GlobalKernel_test_autogen make -f test/CMakeFiles/GlobalKernel_test.dir/build.make test/CMakeFiles/GlobalKernel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GlobalKernel_test.dir/DependInfo.cmake --color= Scanning dependencies of target GlobalKernel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GlobalKernel_test.dir/build.make test/CMakeFiles/GlobalKernel_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GlobalKernel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/GlobalKernel_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GlobalKernel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o -c /<>/test/GlobalKernel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/KERNEL/global.h: In instantiation of ‘void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = BALL::Chain]’: /<>/test/GlobalKernel_test.C:52:19: required from here /<>/include/BALL/KERNEL/global.h:79:19: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 79 | for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/global.h:11, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11, from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/GlobalKernel_test.C:8: /<>/include/BALL/KERNEL/global.h:79:19: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 79 | for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Linking CXX executable ../bin/TEST/GlobalKernel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GlobalKernel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test_autogen/mocs_compilation.cpp.o CMakeFiles/GlobalKernel_test.dir/GlobalKernel_test.C.o -o ../bin/TEST/GlobalKernel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target GlobalKernel_test make -f test/CMakeFiles/GlobalTypes_test_autogen.dir/build.make test/CMakeFiles/GlobalTypes_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GlobalTypes_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GlobalTypes_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GlobalTypes_test_autogen.dir/build.make test/CMakeFiles/GlobalTypes_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target GlobalTypes_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/GlobalTypes_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target GlobalTypes_test_autogen make -f test/CMakeFiles/GlobalTypes_test.dir/build.make test/CMakeFiles/GlobalTypes_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GlobalTypes_test.dir/DependInfo.cmake --color= Scanning dependencies of target GlobalTypes_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GlobalTypes_test.dir/build.make test/CMakeFiles/GlobalTypes_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GlobalTypes_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/GlobalTypes_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GlobalTypes_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o -c /<>/test/GlobalTypes_test.C [ 66%] Linking CXX executable ../bin/TEST/GlobalTypes_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GlobalTypes_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test_autogen/mocs_compilation.cpp.o CMakeFiles/GlobalTypes_test.dir/GlobalTypes_test.C.o -o ../bin/TEST/GlobalTypes_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target GlobalTypes_test make -f test/CMakeFiles/RotamerLibrary_test_autogen.dir/build.make test/CMakeFiles/RotamerLibrary_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RotamerLibrary_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RotamerLibrary_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RotamerLibrary_test_autogen.dir/build.make test/CMakeFiles/RotamerLibrary_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target RotamerLibrary_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RotamerLibrary_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target RotamerLibrary_test_autogen make -f test/CMakeFiles/RotamerLibrary_test.dir/build.make test/CMakeFiles/RotamerLibrary_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RotamerLibrary_test.dir/DependInfo.cmake --color= Scanning dependencies of target RotamerLibrary_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RotamerLibrary_test.dir/build.make test/CMakeFiles/RotamerLibrary_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RotamerLibrary_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RotamerLibrary_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RotamerLibrary_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o -c /<>/test/RotamerLibrary_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/RotamerLibrary_test.C: In function ‘int main(int, char**)’: /<>/test/RotamerLibrary_test.C:154:30: warning: implicitly-declared ‘BALL::Rotamer& BALL::Rotamer::operator=(const BALL::Rotamer&)’ is deprecated [-Wdeprecated-copy] 154 | rotamer = rrs->getRotamer(0); | ^ In file included from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:13, from /<>/test/RotamerLibrary_test.C:10: /<>/include/BALL/STRUCTURE/residueRotamerSet.h:48:3: note: because ‘BALL::Rotamer’ has user-provided ‘BALL::Rotamer::Rotamer(const BALL::Rotamer&)’ 48 | Rotamer(const Rotamer& rotamer); | ^~~~~~~ [ 66%] Linking CXX executable ../bin/TEST/RotamerLibrary_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RotamerLibrary_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test_autogen/mocs_compilation.cpp.o CMakeFiles/RotamerLibrary_test.dir/RotamerLibrary_test.C.o -o ../bin/TEST/RotamerLibrary_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target RotamerLibrary_test make -f test/CMakeFiles/Quaternion_test_autogen.dir/build.make test/CMakeFiles/Quaternion_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Quaternion_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Quaternion_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Quaternion_test_autogen.dir/build.make test/CMakeFiles/Quaternion_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target Quaternion_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Quaternion_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target Quaternion_test_autogen make -f test/CMakeFiles/Quaternion_test.dir/build.make test/CMakeFiles/Quaternion_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Quaternion_test.dir/DependInfo.cmake --color= Scanning dependencies of target Quaternion_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Quaternion_test.dir/build.make test/CMakeFiles/Quaternion_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Quaternion_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Quaternion_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Quaternion_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o -c /<>/test/Quaternion_test.C [ 66%] Linking CXX executable ../bin/TEST/Quaternion_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Quaternion_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Quaternion_test.dir/Quaternion_test_autogen/mocs_compilation.cpp.o CMakeFiles/Quaternion_test.dir/Quaternion_test.C.o -o ../bin/TEST/Quaternion_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target Quaternion_test make -f test/CMakeFiles/DockResultFile_test_autogen.dir/build.make test/CMakeFiles/DockResultFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DockResultFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DockResultFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DockResultFile_test_autogen.dir/build.make test/CMakeFiles/DockResultFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 66%] Automatic MOC for target DockResultFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/DockResultFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 66%] Built target DockResultFile_test_autogen make -f test/CMakeFiles/DockResultFile_test.dir/build.make test/CMakeFiles/DockResultFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DockResultFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target DockResultFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DockResultFile_test.dir/build.make test/CMakeFiles/DockResultFile_test.dir/build make[5]: Entering directory '/<>/build' [ 66%] Building CXX object test/CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DockResultFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/DockResultFile_test_autogen/mocs_compilation.cpp [ 66%] Building CXX object test/CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DockResultFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o -c /<>/test/DockResultFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/test/DockResultFile_test.C: In function ‘bool compareMolecules(BALL::Molecule&, BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/DockResultFile_test.C:42:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 42 | BALL_FOREACH_ATOM(mol1, ai) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/test/DockResultFile_test.C: In function ‘bool compareMolecules(BALL::Molecule&, BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/DockResultFile_test.C:42:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 42 | BALL_FOREACH_ATOM(mol1, ai) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/DockResultFile_test.C:50:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(mol2, ai) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/DockResultFile_test.C:73:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 73 | BALL_FOREACH_BOND(mol1, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/DockResultFile_test.C:73:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 73 | BALL_FOREACH_BOND(mol1, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/test/DockResultFile_test.C: In function ‘bool compareMolecules(BALL::Molecule&, BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/DockResultFile_test.C:73:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 73 | BALL_FOREACH_BOND(mol1, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/DockResultFile_test.C:83:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 83 | BALL_FOREACH_BOND(mol2, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/DockResultFile_test.C:83:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 83 | BALL_FOREACH_BOND(mol2, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/test/DockResultFile_test.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 66%] Linking CXX executable ../bin/TEST/DockResultFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResultFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResultFile_test.dir/DockResultFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/DockResultFile_test.dir/DockResultFile_test.C.o -o ../bin/TEST/DockResultFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 66%] Built target DockResultFile_test make -f test/CMakeFiles/ClassTest_test_autogen.dir/build.make test/CMakeFiles/ClassTest_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClassTest_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ClassTest_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClassTest_test_autogen.dir/build.make test/CMakeFiles/ClassTest_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target ClassTest_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ClassTest_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target ClassTest_test_autogen make -f test/CMakeFiles/ClassTest_test.dir/build.make test/CMakeFiles/ClassTest_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClassTest_test.dir/DependInfo.cmake --color= Scanning dependencies of target ClassTest_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClassTest_test.dir/build.make test/CMakeFiles/ClassTest_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/ClassTest_test.dir/ClassTest_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClassTest_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClassTest_test.dir/ClassTest_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ClassTest_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClassTest_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o -c /<>/test/ClassTest_test.C [ 67%] Linking CXX executable ../bin/TEST/ClassTest_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClassTest_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ClassTest_test.dir/ClassTest_test_autogen/mocs_compilation.cpp.o CMakeFiles/ClassTest_test.dir/ClassTest_test.C.o -o ../bin/TEST/ClassTest_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target ClassTest_test make -f test/CMakeFiles/RTTI_test_autogen.dir/build.make test/CMakeFiles/RTTI_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RTTI_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RTTI_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RTTI_test_autogen.dir/build.make test/CMakeFiles/RTTI_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target RTTI_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RTTI_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target RTTI_test_autogen make -f test/CMakeFiles/RTTI_test.dir/build.make test/CMakeFiles/RTTI_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RTTI_test.dir/DependInfo.cmake --color= Scanning dependencies of target RTTI_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RTTI_test.dir/build.make test/CMakeFiles/RTTI_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RTTI_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RTTI_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/RTTI_test.dir/RTTI_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RTTI_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RTTI_test.dir/RTTI_test.C.o -c /<>/test/RTTI_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/RTTI_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/RTTI_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTTI_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RTTI_test.dir/RTTI_test_autogen/mocs_compilation.cpp.o CMakeFiles/RTTI_test.dir/RTTI_test.C.o -o ../bin/TEST/RTTI_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target RTTI_test make -f test/CMakeFiles/HMOFile_test_autogen.dir/build.make test/CMakeFiles/HMOFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HMOFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HMOFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HMOFile_test_autogen.dir/build.make test/CMakeFiles/HMOFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target HMOFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HMOFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target HMOFile_test_autogen make -f test/CMakeFiles/HMOFile_test.dir/build.make test/CMakeFiles/HMOFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HMOFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target HMOFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HMOFile_test.dir/build.make test/CMakeFiles/HMOFile_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HMOFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HMOFile_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HMOFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o -c /<>/test/HMOFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/test/HMOFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/HMOFile_test.C: In function ‘int main(int, char**)’: /<>/test/HMOFile_test.C:157:29: warning: unused variable ‘comments’ [-Wunused-variable] 157 | std::vector const& comments = f_const.getComments(); | ^~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/HMOFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HMOFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HMOFile_test.dir/HMOFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/HMOFile_test.dir/HMOFile_test.C.o -o ../bin/TEST/HMOFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target HMOFile_test make -f test/CMakeFiles/Surface_test_autogen.dir/build.make test/CMakeFiles/Surface_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Surface_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Surface_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Surface_test_autogen.dir/build.make test/CMakeFiles/Surface_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target Surface_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Surface_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target Surface_test_autogen make -f test/CMakeFiles/Surface_test.dir/build.make test/CMakeFiles/Surface_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Surface_test.dir/DependInfo.cmake --color= Scanning dependencies of target Surface_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Surface_test.dir/build.make test/CMakeFiles/Surface_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Surface_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Surface_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/Surface_test.dir/Surface_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Surface_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Surface_test.dir/Surface_test.C.o -c /<>/test/Surface_test.C [ 67%] Linking CXX executable ../bin/TEST/Surface_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Surface_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Surface_test.dir/Surface_test_autogen/mocs_compilation.cpp.o CMakeFiles/Surface_test.dir/Surface_test.C.o -o ../bin/TEST/Surface_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target Surface_test make -f test/CMakeFiles/Function_test_autogen.dir/build.make test/CMakeFiles/Function_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Function_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Function_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Function_test_autogen.dir/build.make test/CMakeFiles/Function_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target Function_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Function_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target Function_test_autogen make -f test/CMakeFiles/Function_test.dir/build.make test/CMakeFiles/Function_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Function_test.dir/DependInfo.cmake --color= Scanning dependencies of target Function_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Function_test.dir/build.make test/CMakeFiles/Function_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Function_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Function_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/Function_test.dir/Function_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Function_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Function_test.dir/Function_test.C.o -c /<>/test/Function_test.C [ 67%] Linking CXX executable ../bin/TEST/Function_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Function_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Function_test.dir/Function_test_autogen/mocs_compilation.cpp.o CMakeFiles/Function_test.dir/Function_test.C.o -o ../bin/TEST/Function_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target Function_test make -f test/CMakeFiles/ConstForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ConstForwardIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstForwardIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConstForwardIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstForwardIterator_test_autogen.dir/build.make test/CMakeFiles/ConstForwardIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target ConstForwardIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConstForwardIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target ConstForwardIterator_test_autogen make -f test/CMakeFiles/ConstForwardIterator_test.dir/build.make test/CMakeFiles/ConstForwardIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstForwardIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConstForwardIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstForwardIterator_test.dir/build.make test/CMakeFiles/ConstForwardIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstForwardIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConstForwardIterator_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstForwardIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o -c /<>/test/ConstForwardIterator_test.C [ 67%] Linking CXX executable ../bin/TEST/ConstForwardIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstForwardIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstForwardIterator_test.dir/ConstForwardIterator_test.C.o -o ../bin/TEST/ConstForwardIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target ConstForwardIterator_test make -f test/CMakeFiles/TranslationProcessor_test_autogen.dir/build.make test/CMakeFiles/TranslationProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TranslationProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TranslationProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TranslationProcessor_test_autogen.dir/build.make test/CMakeFiles/TranslationProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target TranslationProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/TranslationProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target TranslationProcessor_test_autogen make -f test/CMakeFiles/TranslationProcessor_test.dir/build.make test/CMakeFiles/TranslationProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TranslationProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target TranslationProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TranslationProcessor_test.dir/build.make test/CMakeFiles/TranslationProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TranslationProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TranslationProcessor_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TranslationProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o -c /<>/test/TranslationProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TranslationProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TranslationProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TranslationProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TranslationProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TranslationProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TranslationProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/TranslationProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TranslationProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/TranslationProcessor_test.dir/TranslationProcessor_test.C.o -o ../bin/TEST/TranslationProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target TranslationProcessor_test make -f test/CMakeFiles/DCDFile_test_autogen.dir/build.make test/CMakeFiles/DCDFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DCDFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DCDFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DCDFile_test_autogen.dir/build.make test/CMakeFiles/DCDFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target DCDFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/DCDFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target DCDFile_test_autogen make -f test/CMakeFiles/DCDFile_test.dir/build.make test/CMakeFiles/DCDFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DCDFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target DCDFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DCDFile_test.dir/build.make test/CMakeFiles/DCDFile_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DCDFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/DCDFile_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DCDFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o -c /<>/test/DCDFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/DCDFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/DCDFile.h:9, from /<>/test/DCDFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/DCDFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/DCDFile.h:9, from /<>/test/DCDFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/DCDFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/DCDFile.h:9, from /<>/test/DCDFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/DCDFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DCDFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DCDFile_test.dir/DCDFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/DCDFile_test.dir/DCDFile_test.C.o -o ../bin/TEST/DCDFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target DCDFile_test make -f test/CMakeFiles/ScoringFunction_test_autogen.dir/build.make test/CMakeFiles/ScoringFunction_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ScoringFunction_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ScoringFunction_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ScoringFunction_test_autogen.dir/build.make test/CMakeFiles/ScoringFunction_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target ScoringFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ScoringFunction_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target ScoringFunction_test_autogen make -f test/CMakeFiles/ScoringFunction_test.dir/build.make test/CMakeFiles/ScoringFunction_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ScoringFunction_test.dir/DependInfo.cmake --color= Scanning dependencies of target ScoringFunction_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ScoringFunction_test.dir/build.make test/CMakeFiles/ScoringFunction_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ScoringFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ScoringFunction_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ScoringFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o -c /<>/test/ScoringFunction_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/test/ScoringFunction_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/ScoringFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScoringFunction_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/ScoringFunction_test.dir/ScoringFunction_test.C.o -o ../bin/TEST/ScoringFunction_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target ScoringFunction_test make -f test/CMakeFiles/DockResult_test_autogen.dir/build.make test/CMakeFiles/DockResult_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DockResult_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DockResult_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DockResult_test_autogen.dir/build.make test/CMakeFiles/DockResult_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target DockResult_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/DockResult_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target DockResult_test_autogen make -f test/CMakeFiles/DockResult_test.dir/build.make test/CMakeFiles/DockResult_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DockResult_test.dir/DependInfo.cmake --color= Scanning dependencies of target DockResult_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DockResult_test.dir/build.make test/CMakeFiles/DockResult_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DockResult_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/DockResult_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/DockResult_test.dir/DockResult_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DockResult_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DockResult_test.dir/DockResult_test.C.o -c /<>/test/DockResult_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:15, from /<>/test/DockResult_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:11, from /<>/test/DockResult_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:15, from /<>/test/DockResult_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:11, from /<>/test/DockResult_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:15, from /<>/test/DockResult_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockResult.h:11, from /<>/test/DockResult_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/DockResult_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResult_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResult_test.dir/DockResult_test_autogen/mocs_compilation.cpp.o CMakeFiles/DockResult_test.dir/DockResult_test.C.o -o ../bin/TEST/DockResult_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target DockResult_test make -f test/CMakeFiles/Composite_test1_autogen.dir/build.make test/CMakeFiles/Composite_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test1_autogen.dir/build.make test/CMakeFiles/Composite_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target Composite_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Composite_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target Composite_test1_autogen make -f test/CMakeFiles/Composite_test1.dir/build.make test/CMakeFiles/Composite_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Composite_test1.dir/DependInfo.cmake --color= Scanning dependencies of target Composite_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Composite_test1.dir/build.make test/CMakeFiles/Composite_test1.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/Composite_test1_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/Composite_test1.dir/Composite_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Composite_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Composite_test1.dir/Composite_test1.C.o -c /<>/test/Composite_test1.C /<>/test/Composite_test1.C: In function ‘int main(int, char**)’: /<>/test/Composite_test1.C:249:29: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 249 | sub_it = a.beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test1.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test1.C: In function ‘int main(int, char**)’: /<>/test/Composite_test1.C:249:29: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 249 | sub_it = a.beginComposite(); | ^ /<>/test/Composite_test1.C:270:28: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 270 | sub_it = f.beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test1.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/Composite_test1.C:281:28: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 281 | sub_it = h.beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/Composite_test1.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/Composite_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Composite_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Composite_test1.dir/Composite_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Composite_test1.dir/Composite_test1.C.o -o ../bin/TEST/Composite_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target Composite_test1 make -f test/CMakeFiles/JCAMPFile_test_autogen.dir/build.make test/CMakeFiles/JCAMPFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/JCAMPFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target JCAMPFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/JCAMPFile_test_autogen.dir/build.make test/CMakeFiles/JCAMPFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target JCAMPFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/JCAMPFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target JCAMPFile_test_autogen make -f test/CMakeFiles/JCAMPFile_test.dir/build.make test/CMakeFiles/JCAMPFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/JCAMPFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target JCAMPFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/JCAMPFile_test.dir/build.make test/CMakeFiles/JCAMPFile_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/JCAMPFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/JCAMPFile_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/JCAMPFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o -c /<>/test/JCAMPFile_test.C [ 67%] Linking CXX executable ../bin/TEST/JCAMPFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/JCAMPFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/JCAMPFile_test.dir/JCAMPFile_test.C.o -o ../bin/TEST/JCAMPFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target JCAMPFile_test make -f test/CMakeFiles/EnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/EnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target EnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/EnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target EnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/EnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target EnergyProcessor_test_autogen make -f test/CMakeFiles/EnergyProcessor_test.dir/build.make test/CMakeFiles/EnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target EnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnergyProcessor_test.dir/build.make test/CMakeFiles/EnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/EnergyProcessor_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o -c /<>/test/EnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/EnergyProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/EnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/EnergyProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/EnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/EnergyProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/EnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/EnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnergyProcessor_test.dir/EnergyProcessor_test.C.o -o ../bin/TEST/EnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target EnergyProcessor_test make -f test/CMakeFiles/HashSet_test1_autogen.dir/build.make test/CMakeFiles/HashSet_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashSet_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashSet_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashSet_test1_autogen.dir/build.make test/CMakeFiles/HashSet_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target HashSet_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashSet_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target HashSet_test1_autogen make -f test/CMakeFiles/HashSet_test1.dir/build.make test/CMakeFiles/HashSet_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashSet_test1.dir/DependInfo.cmake --color= Scanning dependencies of target HashSet_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashSet_test1.dir/build.make test/CMakeFiles/HashSet_test1.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashSet_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashSet_test1_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashSet_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o -c /<>/test/HashSet_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test1.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/HashSet_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashSet_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashSet_test1.dir/HashSet_test1_autogen/mocs_compilation.cpp.o CMakeFiles/HashSet_test1.dir/HashSet_test1.C.o -o ../bin/TEST/HashSet_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target HashSet_test1 make -f test/CMakeFiles/String_test3_autogen.dir/build.make test/CMakeFiles/String_test3_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test3_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test3_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test3_autogen.dir/build.make test/CMakeFiles/String_test3_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target String_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test3_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target String_test3_autogen make -f test/CMakeFiles/String_test3.dir/build.make test/CMakeFiles/String_test3.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test3.dir/DependInfo.cmake --color= Scanning dependencies of target String_test3 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test3.dir/build.make test/CMakeFiles/String_test3.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test3_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/String_test3.dir/String_test3.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test3.dir/String_test3.C.o -c /<>/test/String_test3.C /<>/test/String_test3.C: In function ‘int main(int, char**)’: /<>/test/String_test3.C:147:37: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 147 | catch (Exception::GeneralException e) | ^ /<>/test/String_test3.C:137:8: warning: variable ‘x’ set but not used [-Wunused-but-set-variable] 137 | short x = 0; | ^ [ 67%] Linking CXX executable ../bin/TEST/String_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test3.dir/String_test3_autogen/mocs_compilation.cpp.o CMakeFiles/String_test3.dir/String_test3.C.o -o ../bin/TEST/String_test3 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target String_test3 make -f test/CMakeFiles/File_test2_autogen.dir/build.make test/CMakeFiles/File_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/File_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target File_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/File_test2_autogen.dir/build.make test/CMakeFiles/File_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target 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-DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/File_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test2.dir/File_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/File_test2_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/File_test2.dir/File_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/File_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test2.dir/File_test2.C.o -c /<>/test/File_test2.C [ 67%] Linking CXX executable ../bin/TEST/File_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/File_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/File_test2.dir/File_test2_autogen/mocs_compilation.cpp.o CMakeFiles/File_test2.dir/File_test2.C.o -o ../bin/TEST/File_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target File_test2 make -f test/CMakeFiles/Sysinfo_test_autogen.dir/build.make test/CMakeFiles/Sysinfo_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Sysinfo_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Sysinfo_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Sysinfo_test_autogen.dir/build.make test/CMakeFiles/Sysinfo_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target Sysinfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Sysinfo_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target Sysinfo_test_autogen make -f 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-I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sysinfo_test.dir/Sysinfo_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Sysinfo_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Sysinfo_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o -c /<>/test/Sysinfo_test.C [ 67%] Linking CXX executable ../bin/TEST/Sysinfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Sysinfo_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Sysinfo_test.dir/Sysinfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/Sysinfo_test.dir/Sysinfo_test.C.o -o ../bin/TEST/Sysinfo_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target Sysinfo_test make -f test/CMakeFiles/ShiftModel_test_autogen.dir/build.make test/CMakeFiles/ShiftModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftModel_test_autogen.dir/build.make test/CMakeFiles/ShiftModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target ShiftModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ShiftModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target ShiftModel_test_autogen make -f test/CMakeFiles/ShiftModel_test.dir/build.make test/CMakeFiles/ShiftModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftModel_test.dir/build.make test/CMakeFiles/ShiftModel_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ShiftModel_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o -c /<>/test/ShiftModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/test/ShiftModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/ShiftModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftModel_test.dir/ShiftModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftModel_test.dir/ShiftModel_test.C.o -o ../bin/TEST/ShiftModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target ShiftModel_test make -f test/CMakeFiles/ContourSurface_test_autogen.dir/build.make test/CMakeFiles/ContourSurface_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ContourSurface_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ContourSurface_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ContourSurface_test_autogen.dir/build.make test/CMakeFiles/ContourSurface_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target ContourSurface_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ContourSurface_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target ContourSurface_test_autogen make -f test/CMakeFiles/ContourSurface_test.dir/build.make test/CMakeFiles/ContourSurface_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ContourSurface_test.dir/DependInfo.cmake --color= Scanning dependencies of target ContourSurface_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ContourSurface_test.dir/build.make test/CMakeFiles/ContourSurface_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ContourSurface_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ContourSurface_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ContourSurface_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o -c /<>/test/ContourSurface_test.C [ 67%] Linking CXX executable ../bin/TEST/ContourSurface_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ContourSurface_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ContourSurface_test.dir/ContourSurface_test_autogen/mocs_compilation.cpp.o CMakeFiles/ContourSurface_test.dir/ContourSurface_test.C.o -o ../bin/TEST/ContourSurface_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target ContourSurface_test make -f test/CMakeFiles/GeometricProperties_test_autogen.dir/build.make test/CMakeFiles/GeometricProperties_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GeometricProperties_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GeometricProperties_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GeometricProperties_test_autogen.dir/build.make test/CMakeFiles/GeometricProperties_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target GeometricProperties_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/GeometricProperties_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target GeometricProperties_test_autogen make -f test/CMakeFiles/GeometricProperties_test.dir/build.make test/CMakeFiles/GeometricProperties_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GeometricProperties_test.dir/DependInfo.cmake --color= Scanning dependencies of target GeometricProperties_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GeometricProperties_test.dir/build.make test/CMakeFiles/GeometricProperties_test.dir/build make[5]: Entering directory '/<>/build' [ 67%] Building CXX object test/CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GeometricProperties_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/GeometricProperties_test_autogen/mocs_compilation.cpp [ 67%] Building CXX object test/CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GeometricProperties_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o -c /<>/test/GeometricProperties_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13, from /<>/test/GeometricProperties_test.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Linking CXX executable ../bin/TEST/GeometricProperties_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GeometricProperties_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test_autogen/mocs_compilation.cpp.o CMakeFiles/GeometricProperties_test.dir/GeometricProperties_test.C.o -o ../bin/TEST/GeometricProperties_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 67%] Built target GeometricProperties_test make -f test/CMakeFiles/StringHashMap_test_autogen.dir/build.make test/CMakeFiles/StringHashMap_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StringHashMap_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StringHashMap_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StringHashMap_test_autogen.dir/build.make test/CMakeFiles/StringHashMap_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 67%] Automatic MOC for target StringHashMap_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StringHashMap_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 67%] Built target StringHashMap_test_autogen make -f test/CMakeFiles/StringHashMap_test.dir/build.make test/CMakeFiles/StringHashMap_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StringHashMap_test.dir/DependInfo.cmake --color= Scanning dependencies of target StringHashMap_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StringHashMap_test.dir/build.make test/CMakeFiles/StringHashMap_test.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StringHashMap_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/StringHashMap_test_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StringHashMap_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o -c /<>/test/StringHashMap_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/StringHashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Linking CXX executable ../bin/TEST/StringHashMap_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StringHashMap_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StringHashMap_test.dir/StringHashMap_test_autogen/mocs_compilation.cpp.o CMakeFiles/StringHashMap_test.dir/StringHashMap_test.C.o -o ../bin/TEST/StringHashMap_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target StringHashMap_test make -f test/CMakeFiles/FileSystem_test_autogen.dir/build.make test/CMakeFiles/FileSystem_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FileSystem_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FileSystem_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FileSystem_test_autogen.dir/build.make test/CMakeFiles/FileSystem_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target FileSystem_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/FileSystem_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target FileSystem_test_autogen make -f test/CMakeFiles/FileSystem_test.dir/build.make test/CMakeFiles/FileSystem_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FileSystem_test.dir/DependInfo.cmake --color= Scanning dependencies of target FileSystem_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FileSystem_test.dir/build.make test/CMakeFiles/FileSystem_test.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/FileSystem_test.dir/FileSystem_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FileSystem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FileSystem_test.dir/FileSystem_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/FileSystem_test_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/FileSystem_test.dir/FileSystem_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FileSystem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FileSystem_test.dir/FileSystem_test.C.o -c /<>/test/FileSystem_test.C [ 68%] Linking CXX executable ../bin/TEST/FileSystem_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileSystem_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FileSystem_test.dir/FileSystem_test_autogen/mocs_compilation.cpp.o CMakeFiles/FileSystem_test.dir/FileSystem_test.C.o -o ../bin/TEST/FileSystem_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target FileSystem_test make -f test/CMakeFiles/MathsCommon_test_autogen.dir/build.make test/CMakeFiles/MathsCommon_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MathsCommon_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MathsCommon_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MathsCommon_test_autogen.dir/build.make test/CMakeFiles/MathsCommon_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target MathsCommon_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MathsCommon_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target MathsCommon_test_autogen make -f test/CMakeFiles/MathsCommon_test.dir/build.make test/CMakeFiles/MathsCommon_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MathsCommon_test.dir/DependInfo.cmake --color= Scanning dependencies of target MathsCommon_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MathsCommon_test.dir/build.make test/CMakeFiles/MathsCommon_test.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MathsCommon_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MathsCommon_test_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MathsCommon_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o -c /<>/test/MathsCommon_test.C [ 68%] Linking CXX executable ../bin/TEST/MathsCommon_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MathsCommon_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MathsCommon_test.dir/MathsCommon_test_autogen/mocs_compilation.cpp.o CMakeFiles/MathsCommon_test.dir/MathsCommon_test.C.o -o ../bin/TEST/MathsCommon_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target MathsCommon_test make -f test/CMakeFiles/Angle_test_autogen.dir/build.make test/CMakeFiles/Angle_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Angle_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Angle_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Angle_test_autogen.dir/build.make test/CMakeFiles/Angle_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target Angle_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Angle_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target Angle_test_autogen make -f test/CMakeFiles/Angle_test.dir/build.make test/CMakeFiles/Angle_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Angle_test.dir/DependInfo.cmake --color= Scanning dependencies of target Angle_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Angle_test.dir/build.make test/CMakeFiles/Angle_test.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Angle_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Angle_test_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/Angle_test.dir/Angle_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Angle_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Angle_test.dir/Angle_test.C.o -c /<>/test/Angle_test.C [ 68%] Linking CXX executable ../bin/TEST/Angle_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Angle_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Angle_test.dir/Angle_test_autogen/mocs_compilation.cpp.o CMakeFiles/Angle_test.dir/Angle_test.C.o -o ../bin/TEST/Angle_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target Angle_test make -f test/CMakeFiles/HashSet_test2_autogen.dir/build.make test/CMakeFiles/HashSet_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashSet_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashSet_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashSet_test2_autogen.dir/build.make test/CMakeFiles/HashSet_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target HashSet_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashSet_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target HashSet_test2_autogen make -f test/CMakeFiles/HashSet_test2.dir/build.make test/CMakeFiles/HashSet_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashSet_test2.dir/DependInfo.cmake --color= Scanning dependencies of target HashSet_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashSet_test2.dir/build.make test/CMakeFiles/HashSet_test2.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashSet_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashSet_test2_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashSet_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o -c /<>/test/HashSet_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashSet_test2.C:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Linking CXX executable ../bin/TEST/HashSet_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashSet_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashSet_test2.dir/HashSet_test2_autogen/mocs_compilation.cpp.o CMakeFiles/HashSet_test2.dir/HashSet_test2.C.o -o ../bin/TEST/HashSet_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target HashSet_test2 make -f test/CMakeFiles/PeakList_test_autogen.dir/build.make test/CMakeFiles/PeakList_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeakList_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PeakList_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeakList_test_autogen.dir/build.make test/CMakeFiles/PeakList_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target PeakList_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PeakList_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target PeakList_test_autogen make -f test/CMakeFiles/PeakList_test.dir/build.make test/CMakeFiles/PeakList_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeakList_test.dir/DependInfo.cmake --color= Scanning dependencies of target PeakList_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeakList_test.dir/build.make test/CMakeFiles/PeakList_test.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeakList_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PeakList_test_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/PeakList_test.dir/PeakList_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeakList_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeakList_test.dir/PeakList_test.C.o -c /<>/test/PeakList_test.C [ 68%] Linking CXX executable ../bin/TEST/PeakList_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakList_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeakList_test.dir/PeakList_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeakList_test.dir/PeakList_test.C.o -o ../bin/TEST/PeakList_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 68%] Built target PeakList_test make -f test/CMakeFiles/RegularData3D_test1_autogen.dir/build.make test/CMakeFiles/RegularData3D_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData3D_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData3D_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData3D_test1_autogen.dir/build.make test/CMakeFiles/RegularData3D_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 68%] Automatic MOC for target RegularData3D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData3D_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 68%] Built target RegularData3D_test1_autogen make -f test/CMakeFiles/RegularData3D_test1.dir/build.make test/CMakeFiles/RegularData3D_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData3D_test1.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData3D_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData3D_test1.dir/build.make test/CMakeFiles/RegularData3D_test1.dir/build make[5]: Entering directory '/<>/build' [ 68%] Building CXX object test/CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData3D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData3D_test1_autogen/mocs_compilation.cpp [ 68%] Building CXX object test/CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData3D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o -c /<>/test/RegularData3D_test1.C [ 69%] Linking CXX executable ../bin/TEST/RegularData3D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData3D_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData3D_test1.dir/RegularData3D_test1.C.o -o ../bin/TEST/RegularData3D_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 69%] Built target RegularData3D_test1 make -f test/CMakeFiles/FragmentDB_test_autogen.dir/build.make test/CMakeFiles/FragmentDB_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FragmentDB_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FragmentDB_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FragmentDB_test_autogen.dir/build.make test/CMakeFiles/FragmentDB_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 69%] Automatic MOC for target FragmentDB_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/FragmentDB_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 69%] Built target FragmentDB_test_autogen make -f test/CMakeFiles/FragmentDB_test.dir/build.make test/CMakeFiles/FragmentDB_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/FragmentDB_test.dir/DependInfo.cmake --color= Scanning dependencies of target FragmentDB_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/FragmentDB_test.dir/build.make test/CMakeFiles/FragmentDB_test.dir/build make[5]: Entering directory '/<>/build' [ 69%] Building CXX object test/CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FragmentDB_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/FragmentDB_test_autogen/mocs_compilation.cpp [ 69%] Building CXX object test/CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/FragmentDB_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o -c /<>/test/FragmentDB_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/test/FragmentDB_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/FragmentDB_test.C:90:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 90 | BALL_FOREACH_BOND(*res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:90:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 90 | BALL_FOREACH_BOND(*res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/test/FragmentDB_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:90:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 90 | BALL_FOREACH_BOND(*res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/FragmentDB_test.C:124:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 124 | BALL_FOREACH_BOND(res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/test/FragmentDB_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/FragmentDB_test.C:124:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 124 | BALL_FOREACH_BOND(res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:124:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 124 | BALL_FOREACH_BOND(res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/test/FragmentDB_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:124:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 124 | BALL_FOREACH_BOND(res, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/FragmentDB_test.C:158:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 158 | BALL_FOREACH_BOND(*res_it, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:158:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 158 | BALL_FOREACH_BOND(*res_it, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/test/FragmentDB_test.C:166:24: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 166 | atom_it = S.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/FragmentDB_test.C:177:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 177 | for (res_it = S.beginResidue(); +res_it; ++res_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/FragmentDB_test.C: In function ‘int main(int, char**)’: /<>/test/FragmentDB_test.C:177:31: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 177 | for (res_it = S.beginResidue(); +res_it; ++res_it) | ^ In file included from /<>/test/FragmentDB_test.C:15: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/FragmentDB_test.C:180:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 180 | BALL_FOREACH_BOND(*res_it, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/FragmentDB_test.C:15: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/FragmentDB_test.C:180:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 180 | BALL_FOREACH_BOND(*res_it, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/FragmentDB_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 69%] Linking CXX executable ../bin/TEST/FragmentDB_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragmentDB_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FragmentDB_test.dir/FragmentDB_test_autogen/mocs_compilation.cpp.o CMakeFiles/FragmentDB_test.dir/FragmentDB_test.C.o -o ../bin/TEST/FragmentDB_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 69%] Built target FragmentDB_test make -f test/CMakeFiles/Vector4_test_autogen.dir/build.make test/CMakeFiles/Vector4_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Vector4_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Vector4_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Vector4_test_autogen.dir/build.make test/CMakeFiles/Vector4_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 69%] Automatic MOC for target Vector4_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Vector4_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 69%] Built target Vector4_test_autogen make -f test/CMakeFiles/Vector4_test.dir/build.make test/CMakeFiles/Vector4_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Vector4_test.dir/DependInfo.cmake --color= Scanning dependencies of target Vector4_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Vector4_test.dir/build.make test/CMakeFiles/Vector4_test.dir/build make[5]: Entering directory '/<>/build' [ 69%] Building CXX object test/CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector4_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Vector4_test_autogen/mocs_compilation.cpp [ 69%] Building CXX object test/CMakeFiles/Vector4_test.dir/Vector4_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector4_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector4_test.dir/Vector4_test.C.o -c /<>/test/Vector4_test.C [ 69%] Linking CXX executable ../bin/TEST/Vector4_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector4_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector4_test.dir/Vector4_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector4_test.dir/Vector4_test.C.o -o ../bin/TEST/Vector4_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 69%] Built target Vector4_test make -f test/CMakeFiles/PARSE_test_autogen.dir/build.make test/CMakeFiles/PARSE_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PARSE_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PARSE_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PARSE_test_autogen.dir/build.make test/CMakeFiles/PARSE_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 69%] Automatic MOC for target PARSE_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PARSE_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 69%] Built target PARSE_test_autogen make -f test/CMakeFiles/PARSE_test.dir/build.make test/CMakeFiles/PARSE_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PARSE_test.dir/DependInfo.cmake --color= Scanning dependencies of target PARSE_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PARSE_test.dir/build.make test/CMakeFiles/PARSE_test.dir/build make[5]: Entering directory '/<>/build' [ 69%] Building CXX object test/CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PARSE_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PARSE_test_autogen/mocs_compilation.cpp [ 69%] Building CXX object test/CMakeFiles/PARSE_test.dir/PARSE_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PARSE_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PARSE_test.dir/PARSE_test.C.o -c /<>/test/PARSE_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PARSE_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PARSE_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PARSE_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C: In function ‘int main(int, char**)’: /<>/test/PARSE_test.C:54:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 54 | for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:62:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 62 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:62:72: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 62 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:79:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 79 | for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:88:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 88 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:88:72: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 88 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:105:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 105 | for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:114:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 114 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:114:72: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 114 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:131:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 131 | for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:140:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 140 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:140:72: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 140 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:158:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 158 | for (atom_it = system.beginAtom(), total_charge = 0.0f; +atom_it; ++atom_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:167:34: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 167 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/PARSE_test.C:167:72: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 167 | for (atom_it = system.beginAtom(), ref_atom_it = ref_system.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PARSE_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Linking CXX executable ../bin/TEST/PARSE_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PARSE_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PARSE_test.dir/PARSE_test_autogen/mocs_compilation.cpp.o CMakeFiles/PARSE_test.dir/PARSE_test.C.o -o ../bin/TEST/PARSE_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 69%] Built target PARSE_test make -f test/CMakeFiles/Bruker2DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker2DFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bruker2DFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Bruker2DFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bruker2DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker2DFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 69%] Automatic MOC for target Bruker2DFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Bruker2DFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 69%] Built target Bruker2DFile_test_autogen make -f test/CMakeFiles/Bruker2DFile_test.dir/build.make test/CMakeFiles/Bruker2DFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bruker2DFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target Bruker2DFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bruker2DFile_test.dir/build.make test/CMakeFiles/Bruker2DFile_test.dir/build make[5]: Entering directory '/<>/build' [ 69%] Building CXX object test/CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bruker2DFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Bruker2DFile_test_autogen/mocs_compilation.cpp [ 70%] Building CXX object test/CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bruker2DFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o -c /<>/test/Bruker2DFile_test.C [ 70%] Linking CXX executable ../bin/TEST/Bruker2DFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bruker2DFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bruker2DFile_test.dir/Bruker2DFile_test.C.o -o ../bin/TEST/Bruker2DFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 70%] Built target Bruker2DFile_test make -f test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AssignBondOrderProcessor_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 70%] Automatic MOC for target AssignBondOrderProcessor_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 70%] Built target AssignBondOrderProcessor_test2_autogen make -f test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test2.dir/DependInfo.cmake --color= Scanning dependencies of target AssignBondOrderProcessor_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test2.dir/build make[5]: Entering directory '/<>/build' [ 70%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AssignBondOrderProcessor_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp [ 70%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AssignBondOrderProcessor_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o -c /<>/test/AssignBondOrderProcessor_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void deleteBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:39:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 39 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:39:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 39 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void storeHBonds(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:50:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(sys, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test2.C:53:29: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 53 | for (b_it=a_it->beginBond(); b_it != a_it->endBond(); b_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘void deleteHBonds(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:67:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 67 | BALL_FOREACH_ATOM(sys, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘bool compareBondOrder(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:83:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 83 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:83:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 83 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test2.C:17: /<>/test/AssignBondOrderProcessor_test2.C: In function ‘bool compareHBonds(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test2.C:100:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 100 | BALL_FOREACH_ATOM(sys, a_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test2.C:103:29: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 103 | for (b_it=a_it->beginBond(); b_it != a_it->endBond(); b_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test2.C: In function ‘int main(int, char**)’: /<>/test/AssignBondOrderProcessor_test2.C:955:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 955 | for (a_it = sys40.beginAtom(); a_it != sys40.endAtom(); a_it++) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test2.C:957:31: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 957 | for (b_it = a_it->beginBond(); (b_it != a_it->endBond()) && (counter < 7); b_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test2.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 70%] Linking CXX executable ../bin/TEST/AssignBondOrderProcessor_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssignBondOrderProcessor_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2_autogen/mocs_compilation.cpp.o CMakeFiles/AssignBondOrderProcessor_test2.dir/AssignBondOrderProcessor_test2.C.o -o ../bin/TEST/AssignBondOrderProcessor_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 70%] Built target AssignBondOrderProcessor_test2 make -f test/CMakeFiles/AtomContainer_test1_autogen.dir/build.make test/CMakeFiles/AtomContainer_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomContainer_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomContainer_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomContainer_test1_autogen.dir/build.make test/CMakeFiles/AtomContainer_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 70%] Automatic MOC for target AtomContainer_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomContainer_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 70%] Built target AtomContainer_test1_autogen make -f test/CMakeFiles/AtomContainer_test1.dir/build.make test/CMakeFiles/AtomContainer_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomContainer_test1.dir/DependInfo.cmake --color= Scanning dependencies of target AtomContainer_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomContainer_test1.dir/build.make test/CMakeFiles/AtomContainer_test1.dir/build make[5]: Entering directory '/<>/build' [ 70%] Building CXX object test/CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomContainer_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomContainer_test1_autogen/mocs_compilation.cpp [ 70%] Building CXX object test/CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomContainer_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o -c /<>/test/AtomContainer_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomContainer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 70%] Linking CXX executable ../bin/TEST/AtomContainer_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomContainer_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1_autogen/mocs_compilation.cpp.o CMakeFiles/AtomContainer_test1.dir/AtomContainer_test1.C.o -o ../bin/TEST/AtomContainer_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 70%] Built target AtomContainer_test1 make -f test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/build.make test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideCapProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/build.make test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 70%] Automatic MOC for target PeptideCapProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PeptideCapProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 70%] Built target PeptideCapProcessor_test_autogen make -f test/CMakeFiles/PeptideCapProcessor_test.dir/build.make test/CMakeFiles/PeptideCapProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PeptideCapProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideCapProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PeptideCapProcessor_test.dir/build.make test/CMakeFiles/PeptideCapProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 70%] Building CXX object test/CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeptideCapProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PeptideCapProcessor_test_autogen/mocs_compilation.cpp [ 70%] Building CXX object test/CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PeptideCapProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o -c /<>/test/PeptideCapProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13, from /<>/test/PeptideCapProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 70%] Linking CXX executable ../bin/TEST/PeptideCapProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideCapProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideCapProcessor_test.dir/PeptideCapProcessor_test.C.o -o ../bin/TEST/PeptideCapProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 70%] Built target PeptideCapProcessor_test make -f test/CMakeFiles/BitVector_test2_autogen.dir/build.make test/CMakeFiles/BitVector_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BitVector_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BitVector_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BitVector_test2_autogen.dir/build.make test/CMakeFiles/BitVector_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 70%] Automatic MOC for target BitVector_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BitVector_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 70%] Built target BitVector_test2_autogen make -f test/CMakeFiles/BitVector_test2.dir/build.make test/CMakeFiles/BitVector_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BitVector_test2.dir/DependInfo.cmake --color= Scanning dependencies of target BitVector_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BitVector_test2.dir/build.make test/CMakeFiles/BitVector_test2.dir/build make[5]: Entering directory '/<>/build' [ 70%] Building CXX object test/CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BitVector_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/BitVector_test2_autogen/mocs_compilation.cpp [ 70%] Building CXX object test/CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BitVector_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o -c /<>/test/BitVector_test2.C [ 72%] Linking CXX executable ../bin/TEST/BitVector_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BitVector_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BitVector_test2.dir/BitVector_test2_autogen/mocs_compilation.cpp.o CMakeFiles/BitVector_test2.dir/BitVector_test2.C.o -o ../bin/TEST/BitVector_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 72%] Built target BitVector_test2 make -f test/CMakeFiles/Extractors_test_autogen.dir/build.make test/CMakeFiles/Extractors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Extractors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Extractors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Extractors_test_autogen.dir/build.make test/CMakeFiles/Extractors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 72%] Automatic MOC for target Extractors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Extractors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 72%] Built target Extractors_test_autogen make -f test/CMakeFiles/Extractors_test.dir/build.make test/CMakeFiles/Extractors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Extractors_test.dir/DependInfo.cmake --color= Scanning dependencies of target Extractors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Extractors_test.dir/build.make test/CMakeFiles/Extractors_test.dir/build make[5]: Entering directory '/<>/build' [ 72%] Building CXX object test/CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Extractors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Extractors_test_autogen/mocs_compilation.cpp [ 72%] Building CXX object test/CMakeFiles/Extractors_test.dir/Extractors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Extractors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Extractors_test.dir/Extractors_test.C.o -c /<>/test/Extractors_test.C [ 72%] Linking CXX executable ../bin/TEST/Extractors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Extractors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Extractors_test.dir/Extractors_test_autogen/mocs_compilation.cpp.o CMakeFiles/Extractors_test.dir/Extractors_test.C.o -o ../bin/TEST/Extractors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 72%] Built target Extractors_test make -f test/CMakeFiles/HashMap_test_autogen.dir/build.make test/CMakeFiles/HashMap_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashMap_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashMap_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashMap_test_autogen.dir/build.make test/CMakeFiles/HashMap_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 72%] Automatic MOC for target HashMap_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashMap_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 72%] Built target HashMap_test_autogen make -f test/CMakeFiles/HashMap_test.dir/build.make test/CMakeFiles/HashMap_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashMap_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashMap_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashMap_test.dir/build.make test/CMakeFiles/HashMap_test.dir/build make[5]: Entering directory '/<>/build' [ 72%] Building CXX object test/CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashMap_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashMap_test_autogen/mocs_compilation.cpp [ 73%] Building CXX object test/CMakeFiles/HashMap_test.dir/HashMap_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashMap_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashMap_test.dir/HashMap_test.C.o -c /<>/test/HashMap_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/HashMap_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable ../bin/TEST/HashMap_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashMap_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashMap_test.dir/HashMap_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashMap_test.dir/HashMap_test.C.o -o ../bin/TEST/HashMap_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 73%] Built target HashMap_test make -f test/CMakeFiles/Directory_test_autogen.dir/build.make test/CMakeFiles/Directory_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Directory_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Directory_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Directory_test_autogen.dir/build.make test/CMakeFiles/Directory_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 73%] Automatic MOC for target Directory_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Directory_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 73%] Built target Directory_test_autogen make -f test/CMakeFiles/Directory_test.dir/build.make test/CMakeFiles/Directory_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Directory_test.dir/DependInfo.cmake --color= Scanning dependencies of target Directory_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Directory_test.dir/build.make test/CMakeFiles/Directory_test.dir/build make[5]: Entering directory '/<>/build' [ 73%] Building CXX object test/CMakeFiles/Directory_test.dir/Directory_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Directory_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Directory_test.dir/Directory_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Directory_test_autogen/mocs_compilation.cpp [ 73%] Building CXX object test/CMakeFiles/Directory_test.dir/Directory_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Directory_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Directory_test.dir/Directory_test.C.o -c /<>/test/Directory_test.C [ 73%] Linking CXX executable ../bin/TEST/Directory_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Directory_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Directory_test.dir/Directory_test_autogen/mocs_compilation.cpp.o CMakeFiles/Directory_test.dir/Directory_test.C.o -o ../bin/TEST/Directory_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 73%] Built target Directory_test make -f test/CMakeFiles/VersionInfo_test_autogen.dir/build.make test/CMakeFiles/VersionInfo_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/VersionInfo_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target VersionInfo_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/VersionInfo_test_autogen.dir/build.make test/CMakeFiles/VersionInfo_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 73%] Automatic MOC for target VersionInfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/VersionInfo_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 73%] Built target VersionInfo_test_autogen make -f test/CMakeFiles/VersionInfo_test.dir/build.make test/CMakeFiles/VersionInfo_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/VersionInfo_test.dir/DependInfo.cmake --color= Scanning dependencies of target VersionInfo_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/VersionInfo_test.dir/build.make test/CMakeFiles/VersionInfo_test.dir/build make[5]: Entering directory '/<>/build' [ 73%] Building CXX object test/CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/VersionInfo_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/VersionInfo_test_autogen/mocs_compilation.cpp [ 74%] Building CXX object test/CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/VersionInfo_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o -c /<>/test/VersionInfo_test.C [ 74%] Linking CXX executable ../bin/TEST/VersionInfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/VersionInfo_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/VersionInfo_test.dir/VersionInfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/VersionInfo_test.dir/VersionInfo_test.C.o -o ../bin/TEST/VersionInfo_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 74%] Built target VersionInfo_test make -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ReissCavFreeEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 74%] Automatic MOC for target ReissCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 74%] Built target ReissCavFreeEnergyProcessor_test_autogen make -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target ReissCavFreeEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 74%] Building CXX object test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ReissCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp [ 74%] Building CXX object test/CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ReissCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o -c /<>/test/ReissCavFreeEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/test/ReissCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX executable ../bin/TEST/ReissCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ReissCavFreeEnergyProcessor_test.dir/ReissCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/ReissCavFreeEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 74%] Built target ReissCavFreeEnergyProcessor_test make -f test/CMakeFiles/LineBasedFile_test_autogen.dir/build.make test/CMakeFiles/LineBasedFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineBasedFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LineBasedFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineBasedFile_test_autogen.dir/build.make test/CMakeFiles/LineBasedFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 74%] Automatic MOC for target LineBasedFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LineBasedFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 74%] Built target LineBasedFile_test_autogen make -f test/CMakeFiles/LineBasedFile_test.dir/build.make test/CMakeFiles/LineBasedFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LineBasedFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target LineBasedFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LineBasedFile_test.dir/build.make test/CMakeFiles/LineBasedFile_test.dir/build make[5]: Entering directory '/<>/build' [ 74%] Building CXX object test/CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LineBasedFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/LineBasedFile_test_autogen/mocs_compilation.cpp [ 74%] Building CXX object test/CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/LineBasedFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o -c /<>/test/LineBasedFile_test.C [ 74%] Linking CXX executable ../bin/TEST/LineBasedFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineBasedFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/LineBasedFile_test.dir/LineBasedFile_test.C.o -o ../bin/TEST/LineBasedFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 74%] Built target LineBasedFile_test make -f test/CMakeFiles/Plane3_test_autogen.dir/build.make test/CMakeFiles/Plane3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Plane3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Plane3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Plane3_test_autogen.dir/build.make test/CMakeFiles/Plane3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 74%] Automatic MOC for target Plane3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Plane3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 74%] Built target Plane3_test_autogen make -f test/CMakeFiles/Plane3_test.dir/build.make test/CMakeFiles/Plane3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Plane3_test.dir/DependInfo.cmake --color= Scanning dependencies of target Plane3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Plane3_test.dir/build.make test/CMakeFiles/Plane3_test.dir/build make[5]: Entering directory '/<>/build' [ 74%] Building CXX object test/CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Plane3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Plane3_test_autogen/mocs_compilation.cpp [ 74%] Building CXX object test/CMakeFiles/Plane3_test.dir/Plane3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Plane3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Plane3_test.dir/Plane3_test.C.o -c /<>/test/Plane3_test.C [ 74%] Linking CXX executable ../bin/TEST/Plane3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Plane3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Plane3_test.dir/Plane3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Plane3_test.dir/Plane3_test.C.o -o ../bin/TEST/Plane3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 74%] Built target Plane3_test make -f test/CMakeFiles/System_test_autogen.dir/build.make test/CMakeFiles/System_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/System_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target System_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/System_test_autogen.dir/build.make test/CMakeFiles/System_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 74%] Automatic MOC for target System_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/System_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 74%] Built target System_test_autogen make -f test/CMakeFiles/System_test.dir/build.make test/CMakeFiles/System_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/System_test.dir/DependInfo.cmake --color= Scanning dependencies of target System_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/System_test.dir/build.make test/CMakeFiles/System_test.dir/build make[5]: Entering directory '/<>/build' [ 74%] Building CXX object test/CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/System_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/System_test_autogen/mocs_compilation.cpp [ 74%] Building CXX object test/CMakeFiles/System_test.dir/System_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/System_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/System_test.dir/System_test.C.o -c /<>/test/System_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/System_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX executable ../bin/TEST/System_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/System_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/System_test.dir/System_test_autogen/mocs_compilation.cpp.o CMakeFiles/System_test.dir/System_test.C.o -o ../bin/TEST/System_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 75%] Built target System_test make -f test/CMakeFiles/Contour_test_autogen.dir/build.make test/CMakeFiles/Contour_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Contour_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Contour_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Contour_test_autogen.dir/build.make test/CMakeFiles/Contour_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 76%] Automatic MOC for target Contour_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Contour_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 76%] Built target Contour_test_autogen make -f test/CMakeFiles/Contour_test.dir/build.make test/CMakeFiles/Contour_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Contour_test.dir/DependInfo.cmake --color= Scanning dependencies of target Contour_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Contour_test.dir/build.make test/CMakeFiles/Contour_test.dir/build make[5]: Entering directory '/<>/build' [ 76%] Building CXX object test/CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Contour_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Contour_test_autogen/mocs_compilation.cpp [ 76%] Building CXX object test/CMakeFiles/Contour_test.dir/Contour_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK 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--verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Contour_test.dir/Contour_test_autogen/mocs_compilation.cpp.o CMakeFiles/Contour_test.dir/Contour_test.C.o -o ../bin/TEST/Contour_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 76%] Built target Contour_test make -f test/CMakeFiles/ResidueChecker_test_autogen.dir/build.make test/CMakeFiles/ResidueChecker_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ResidueChecker_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ResidueChecker_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ResidueChecker_test_autogen.dir/build.make test/CMakeFiles/ResidueChecker_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 76%] Automatic MOC for target ResidueChecker_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ResidueChecker_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 76%] Built target 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/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueChecker_test.dir/ResidueChecker_test.C.o -o ../bin/TEST/ResidueChecker_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target ResidueChecker_test make -f test/CMakeFiles/PreciseTime_test_autogen.dir/build.make test/CMakeFiles/PreciseTime_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PreciseTime_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PreciseTime_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PreciseTime_test_autogen.dir/build.make test/CMakeFiles/PreciseTime_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target PreciseTime_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PreciseTime_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory 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-DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PreciseTime_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PreciseTime_test.dir/PreciseTime_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PreciseTime_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PreciseTime_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o -c /<>/test/PreciseTime_test.C [ 77%] Linking CXX executable ../bin/TEST/PreciseTime_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PreciseTime_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PreciseTime_test.dir/PreciseTime_test_autogen/mocs_compilation.cpp.o CMakeFiles/PreciseTime_test.dir/PreciseTime_test.C.o -o ../bin/TEST/PreciseTime_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target PreciseTime_test make -f test/CMakeFiles/PDBFile_test_autogen.dir/build.make test/CMakeFiles/PDBFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBFile_test_autogen.dir/build.make test/CMakeFiles/PDBFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target PDBFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PDBFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target PDBFile_test_autogen make -f test/CMakeFiles/PDBFile_test.dir/build.make test/CMakeFiles/PDBFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target PDBFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBFile_test.dir/build.make test/CMakeFiles/PDBFile_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PDBFile_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o -c /<>/test/PDBFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/PDBFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../bin/TEST/PDBFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBFile_test.dir/PDBFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBFile_test.dir/PDBFile_test.C.o -o ../bin/TEST/PDBFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target PDBFile_test make -f test/CMakeFiles/RegularData1D_test1_autogen.dir/build.make test/CMakeFiles/RegularData1D_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData1D_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData1D_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData1D_test1_autogen.dir/build.make test/CMakeFiles/RegularData1D_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target RegularData1D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData1D_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target RegularData1D_test1_autogen make -f test/CMakeFiles/RegularData1D_test1.dir/build.make test/CMakeFiles/RegularData1D_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData1D_test1.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData1D_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData1D_test1.dir/build.make test/CMakeFiles/RegularData1D_test1.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData1D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData1D_test1_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData1D_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o -c /<>/test/RegularData1D_test1.C [ 77%] Linking CXX executable ../bin/TEST/RegularData1D_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData1D_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData1D_test1.dir/RegularData1D_test1.C.o -o ../bin/TEST/RegularData1D_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target RegularData1D_test1 make -f test/CMakeFiles/INIFile_test1_autogen.dir/build.make test/CMakeFiles/INIFile_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/INIFile_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target INIFile_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/INIFile_test1_autogen.dir/build.make test/CMakeFiles/INIFile_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target INIFile_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/INIFile_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target INIFile_test1_autogen make -f test/CMakeFiles/INIFile_test1.dir/build.make test/CMakeFiles/INIFile_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/INIFile_test1.dir/DependInfo.cmake --color= Scanning dependencies of target INIFile_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/INIFile_test1.dir/build.make test/CMakeFiles/INIFile_test1.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/INIFile_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/INIFile_test1_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/INIFile_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o -c /<>/test/INIFile_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../bin/TEST/INIFile_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFile_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/INIFile_test1.dir/INIFile_test1_autogen/mocs_compilation.cpp.o CMakeFiles/INIFile_test1.dir/INIFile_test1.C.o -o ../bin/TEST/INIFile_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target INIFile_test1 make -f test/CMakeFiles/LogStream_test_autogen.dir/build.make test/CMakeFiles/LogStream_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/LogStream_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LogStream_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/LogStream_test_autogen.dir/build.make test/CMakeFiles/LogStream_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target LogStream_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/LogStream_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target LogStream_test_autogen make -f test/CMakeFiles/LogStream_test.dir/build.make test/CMakeFiles/LogStream_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E 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CMakeFiles/LogStream_test.dir/LogStream_test_autogen/mocs_compilation.cpp.o CMakeFiles/LogStream_test.dir/LogStream_test.C.o -o ../bin/TEST/LogStream_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target LogStream_test make -f test/CMakeFiles/Vector2_test_autogen.dir/build.make 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/<>/build/test/CMakeFiles/Vector2_test.dir/DependInfo.cmake --color= Scanning dependencies of target Vector2_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Vector2_test.dir/build.make test/CMakeFiles/Vector2_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector2_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Vector2_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/Vector2_test.dir/Vector2_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Vector2_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Vector2_test.dir/Vector2_test.C.o -c /<>/test/Vector2_test.C [ 77%] Linking CXX executable ../bin/TEST/Vector2_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vector2_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Vector2_test.dir/Vector2_test_autogen/mocs_compilation.cpp.o CMakeFiles/Vector2_test.dir/Vector2_test.C.o -o ../bin/TEST/Vector2_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target Vector2_test make -f test/CMakeFiles/NamedProperty_test_autogen.dir/build.make test/CMakeFiles/NamedProperty_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NamedProperty_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NamedProperty_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NamedProperty_test_autogen.dir/build.make test/CMakeFiles/NamedProperty_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target NamedProperty_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NamedProperty_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target NamedProperty_test_autogen make -f test/CMakeFiles/NamedProperty_test.dir/build.make test/CMakeFiles/NamedProperty_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NamedProperty_test.dir/DependInfo.cmake --color= Scanning dependencies of target NamedProperty_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NamedProperty_test.dir/build.make test/CMakeFiles/NamedProperty_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NamedProperty_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NamedProperty_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NamedProperty_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o -c /<>/test/NamedProperty_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/NamedProperty_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/NamedProperty_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/NamedProperty_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/NamedProperty_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/test/NamedProperty_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/test/NamedProperty_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../bin/TEST/NamedProperty_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NamedProperty_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NamedProperty_test.dir/NamedProperty_test_autogen/mocs_compilation.cpp.o CMakeFiles/NamedProperty_test.dir/NamedProperty_test.C.o -o ../bin/TEST/NamedProperty_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target NamedProperty_test make -f test/CMakeFiles/String_test2_autogen.dir/build.make test/CMakeFiles/String_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test2_autogen.dir/build.make test/CMakeFiles/String_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target String_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target String_test2_autogen make -f test/CMakeFiles/String_test2.dir/build.make test/CMakeFiles/String_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test2.dir/DependInfo.cmake --color= Scanning dependencies of target String_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test2.dir/build.make test/CMakeFiles/String_test2.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test2_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/String_test2.dir/String_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test2.dir/String_test2.C.o -c /<>/test/String_test2.C /<>/test/String_test2.C: In function ‘int main(int, char**)’: /<>/test/String_test2.C:21:9: warning: unused variable ‘s’ [-Wunused-variable] 21 | String* s; | ^ [ 77%] Linking CXX executable ../bin/TEST/String_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test2.dir/String_test2_autogen/mocs_compilation.cpp.o CMakeFiles/String_test2.dir/String_test2.C.o -o ../bin/TEST/String_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target String_test2 make -f test/CMakeFiles/String_test8_autogen.dir/build.make test/CMakeFiles/String_test8_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test8_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test8_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test8_autogen.dir/build.make test/CMakeFiles/String_test8_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target String_test8 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test8_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target String_test8_autogen make -f test/CMakeFiles/String_test8.dir/build.make test/CMakeFiles/String_test8.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test8.dir/DependInfo.cmake --color= Scanning dependencies of target String_test8 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test8.dir/build.make test/CMakeFiles/String_test8.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test8_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test8_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/String_test8.dir/String_test8.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test8_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test8.dir/String_test8.C.o -c /<>/test/String_test8.C [ 77%] Linking CXX executable ../bin/TEST/String_test8 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test8.dir/String_test8_autogen/mocs_compilation.cpp.o CMakeFiles/String_test8.dir/String_test8.C.o -o ../bin/TEST/String_test8 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target String_test8 make -f test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/TextPersistenceManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TextPersistenceManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TextPersistenceManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build.make test/CMakeFiles/TextPersistenceManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target TextPersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/TextPersistenceManager_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target TextPersistenceManager_test_autogen make -f test/CMakeFiles/TextPersistenceManager_test.dir/build.make test/CMakeFiles/TextPersistenceManager_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TextPersistenceManager_test.dir/DependInfo.cmake --color= Scanning dependencies of target TextPersistenceManager_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TextPersistenceManager_test.dir/build.make test/CMakeFiles/TextPersistenceManager_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TextPersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TextPersistenceManager_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TextPersistenceManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o -c /<>/test/TextPersistenceManager_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/TextPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/textPersistenceManager.h:11, from /<>/test/TextPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/TextPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/textPersistenceManager.h:11, from /<>/test/TextPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/TextPersistenceManager_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/CONCEPT/textPersistenceManager.h:11, from /<>/test/TextPersistenceManager_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../bin/TEST/TextPersistenceManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextPersistenceManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/TextPersistenceManager_test.dir/TextPersistenceManager_test.C.o -o ../bin/TEST/TextPersistenceManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target TextPersistenceManager_test make -f test/CMakeFiles/HashGrid3_test_autogen.dir/build.make test/CMakeFiles/HashGrid3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3_test_autogen.dir/build.make test/CMakeFiles/HashGrid3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target HashGrid3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGrid3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target HashGrid3_test_autogen make -f test/CMakeFiles/HashGrid3_test.dir/build.make test/CMakeFiles/HashGrid3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3_test.dir/build.make test/CMakeFiles/HashGrid3_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGrid3_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o -c /<>/test/HashGrid3_test.C [ 77%] Linking CXX executable ../bin/TEST/HashGrid3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3_test.dir/HashGrid3_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3_test.dir/HashGrid3_test.C.o -o ../bin/TEST/HashGrid3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target HashGrid3_test make -f test/CMakeFiles/RegularData1D_test2_autogen.dir/build.make test/CMakeFiles/RegularData1D_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData1D_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData1D_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData1D_test2_autogen.dir/build.make test/CMakeFiles/RegularData1D_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target RegularData1D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularData1D_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target RegularData1D_test2_autogen make -f test/CMakeFiles/RegularData1D_test2.dir/build.make test/CMakeFiles/RegularData1D_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularData1D_test2.dir/DependInfo.cmake --color= Scanning dependencies of target RegularData1D_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularData1D_test2.dir/build.make test/CMakeFiles/RegularData1D_test2.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData1D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularData1D_test2_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularData1D_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o -c /<>/test/RegularData1D_test2.C [ 77%] Linking CXX executable ../bin/TEST/RegularData1D_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularData1D_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2_autogen/mocs_compilation.cpp.o CMakeFiles/RegularData1D_test2.dir/RegularData1D_test2.C.o -o ../bin/TEST/RegularData1D_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target RegularData1D_test2 make 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test/CMakeFiles/BinaryFileAdaptor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BinaryFileAdaptor_test.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryFileAdaptor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BinaryFileAdaptor_test.dir/build.make test/CMakeFiles/BinaryFileAdaptor_test.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BinaryFileAdaptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BinaryFileAdaptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o -c /<>/test/BinaryFileAdaptor_test.C [ 77%] Linking CXX executable ../bin/TEST/BinaryFileAdaptor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryFileAdaptor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BinaryFileAdaptor_test.dir/BinaryFileAdaptor_test.C.o -o ../bin/TEST/BinaryFileAdaptor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target BinaryFileAdaptor_test make -f test/CMakeFiles/TransformationManager_test_autogen.dir/build.make test/CMakeFiles/TransformationManager_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TransformationManager_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TransformationManager_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TransformationManager_test_autogen.dir/build.make test/CMakeFiles/TransformationManager_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target TransformationManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen 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-DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TransformationManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationManager_test.dir/TransformationManager_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TransformationManager_test_autogen/mocs_compilation.cpp [ 77%] Building CXX object test/CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TransformationManager_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o -c /<>/test/TransformationManager_test.C [ 77%] Linking CXX executable ../bin/TEST/TransformationManager_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationManager_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TransformationManager_test.dir/TransformationManager_test_autogen/mocs_compilation.cpp.o CMakeFiles/TransformationManager_test.dir/TransformationManager_test.C.o -o ../bin/TEST/TransformationManager_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 77%] Built target TransformationManager_test make -f test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 77%] Automatic MOC for target ShiftedLVMMMinimizer_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 77%] Built target ShiftedLVMMMinimizer_test1_autogen make -f test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/build make[5]: Entering directory '/<>/build' [ 77%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp [ 79%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o -c /<>/test/ShiftedLVMMMinimizer_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 79%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test1.dir/ShiftedLVMMMinimizer_test1.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 79%] Built target ShiftedLVMMMinimizer_test1 make -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeChildcompositeIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 79%] Automatic MOC for target CompositeChildcompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 79%] Built target CompositeChildcompositeIteratorTraits_test_autogen make -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeChildcompositeIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 79%] Building CXX object test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeChildcompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp [ 79%] Building CXX object test/CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeChildcompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o -c /<>/test/CompositeChildcompositeIteratorTraits_test.C In file included from /<>/test/CompositeChildcompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeChildcompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeChildcompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeChildcompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeChildcompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeChildcompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/CompositeChildcompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeChildcompositeIteratorTraits_test.dir/CompositeChildcompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeChildcompositeIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target CompositeChildcompositeIteratorTraits_test make -f test/CMakeFiles/HashGridBox3_test_autogen.dir/build.make test/CMakeFiles/HashGridBox3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGridBox3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGridBox3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGridBox3_test_autogen.dir/build.make test/CMakeFiles/HashGridBox3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target HashGridBox3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGridBox3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target HashGridBox3_test_autogen make -f test/CMakeFiles/HashGridBox3_test.dir/build.make test/CMakeFiles/HashGridBox3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGridBox3_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGridBox3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGridBox3_test.dir/build.make test/CMakeFiles/HashGridBox3_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGridBox3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGridBox3_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGridBox3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o -c /<>/test/HashGridBox3_test.C [ 80%] Linking CXX executable ../bin/TEST/HashGridBox3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGridBox3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGridBox3_test.dir/HashGridBox3_test.C.o -o ../bin/TEST/HashGridBox3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target HashGridBox3_test make -f test/CMakeFiles/RegularExpression_test_autogen.dir/build.make test/CMakeFiles/RegularExpression_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularExpression_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RegularExpression_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularExpression_test_autogen.dir/build.make test/CMakeFiles/RegularExpression_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target RegularExpression_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RegularExpression_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target RegularExpression_test_autogen make -f test/CMakeFiles/RegularExpression_test.dir/build.make test/CMakeFiles/RegularExpression_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RegularExpression_test.dir/DependInfo.cmake --color= Scanning dependencies of target RegularExpression_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RegularExpression_test.dir/build.make test/CMakeFiles/RegularExpression_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularExpression_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RegularExpression_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RegularExpression_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o -c /<>/test/RegularExpression_test.C [ 80%] Linking CXX executable ../bin/TEST/RegularExpression_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularExpression_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RegularExpression_test.dir/RegularExpression_test_autogen/mocs_compilation.cpp.o CMakeFiles/RegularExpression_test.dir/RegularExpression_test.C.o -o ../bin/TEST/RegularExpression_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target RegularExpression_test make -f test/CMakeFiles/AnalyticalSES_test_autogen.dir/build.make test/CMakeFiles/AnalyticalSES_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnalyticalSES_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AnalyticalSES_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnalyticalSES_test_autogen.dir/build.make test/CMakeFiles/AnalyticalSES_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target AnalyticalSES_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AnalyticalSES_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target AnalyticalSES_test_autogen make -f test/CMakeFiles/AnalyticalSES_test.dir/build.make test/CMakeFiles/AnalyticalSES_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnalyticalSES_test.dir/DependInfo.cmake --color= Scanning dependencies of target AnalyticalSES_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnalyticalSES_test.dir/build.make test/CMakeFiles/AnalyticalSES_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnalyticalSES_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AnalyticalSES_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnalyticalSES_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o -c /<>/test/AnalyticalSES_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/AnalyticalSES_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/AnalyticalSES_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnalyticalSES_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnalyticalSES_test.dir/AnalyticalSES_test.C.o -o ../bin/TEST/AnalyticalSES_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target AnalyticalSES_test make -f test/CMakeFiles/PDBAtom_test_autogen.dir/build.make test/CMakeFiles/PDBAtom_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBAtom_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBAtom_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBAtom_test_autogen.dir/build.make test/CMakeFiles/PDBAtom_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target PDBAtom_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PDBAtom_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target PDBAtom_test_autogen make -f test/CMakeFiles/PDBAtom_test.dir/build.make test/CMakeFiles/PDBAtom_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBAtom_test.dir/DependInfo.cmake --color= Scanning dependencies of target PDBAtom_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBAtom_test.dir/build.make test/CMakeFiles/PDBAtom_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBAtom_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PDBAtom_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBAtom_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o -c /<>/test/PDBAtom_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/PDBAtom_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/test/PDBAtom_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/PDBAtom_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/test/PDBAtom_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/test/PDBAtom_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/test/PDBAtom_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/PDBAtom_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBAtom_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBAtom_test.dir/PDBAtom_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBAtom_test.dir/PDBAtom_test.C.o -o ../bin/TEST/PDBAtom_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target PDBAtom_test make -f test/CMakeFiles/Spectrum_test_autogen.dir/build.make test/CMakeFiles/Spectrum_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Spectrum_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Spectrum_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Spectrum_test_autogen.dir/build.make test/CMakeFiles/Spectrum_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target Spectrum_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Spectrum_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target Spectrum_test_autogen make -f test/CMakeFiles/Spectrum_test.dir/build.make test/CMakeFiles/Spectrum_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Spectrum_test.dir/DependInfo.cmake --color= Scanning dependencies of target Spectrum_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Spectrum_test.dir/build.make test/CMakeFiles/Spectrum_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Spectrum_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Spectrum_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Spectrum_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o -c /<>/test/Spectrum_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Spectrum_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/Spectrum_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Spectrum_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/Spectrum_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Spectrum_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/Spectrum_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/NMR/spectrum.h:335, from /<>/test/Spectrum_test.C:12: /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float; BALL::Spectrum::PositionType = float]’: /<>/include/BALL/NMR/spectrum.iC:20:31: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 20 | catch (Exception::OutOfGrid e) | ^ In file included from /<>/include/BALL/NMR/spectrum.h:335, from /<>/test/Spectrum_test.C:12: /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2; BALL::Spectrum::PositionType = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:46:31: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 46 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:135:32: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 135 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:177:32: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 177 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/Spectrum_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spectrum_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Spectrum_test.dir/Spectrum_test_autogen/mocs_compilation.cpp.o CMakeFiles/Spectrum_test.dir/Spectrum_test.C.o -o ../bin/TEST/Spectrum_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target Spectrum_test make -f test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build.make test/CMakeFiles/RMSDMinimizer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RMSDMinimizer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RMSDMinimizer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build.make test/CMakeFiles/RMSDMinimizer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target RMSDMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RMSDMinimizer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target RMSDMinimizer_test_autogen make -f test/CMakeFiles/RMSDMinimizer_test.dir/build.make test/CMakeFiles/RMSDMinimizer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RMSDMinimizer_test.dir/DependInfo.cmake --color= Scanning dependencies of target RMSDMinimizer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RMSDMinimizer_test.dir/build.make test/CMakeFiles/RMSDMinimizer_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RMSDMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RMSDMinimizer_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RMSDMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o -c /<>/test/RMSDMinimizer_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/test/RMSDMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/RMSDMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RMSDMinimizer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/RMSDMinimizer_test.dir/RMSDMinimizer_test.C.o -o ../bin/TEST/RMSDMinimizer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target RMSDMinimizer_test make -f test/CMakeFiles/Atom_test2_autogen.dir/build.make test/CMakeFiles/Atom_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Atom_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Atom_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Atom_test2_autogen.dir/build.make test/CMakeFiles/Atom_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target Atom_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Atom_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target Atom_test2_autogen make -f test/CMakeFiles/Atom_test2.dir/build.make test/CMakeFiles/Atom_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Atom_test2.dir/DependInfo.cmake --color= Scanning dependencies of target Atom_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Atom_test2.dir/build.make test/CMakeFiles/Atom_test2.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Atom_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/Atom_test2_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/Atom_test2.dir/Atom_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Atom_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Atom_test2.dir/Atom_test2.C.o -c /<>/test/Atom_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/Atom_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/Atom_test2.C: In function ‘int main(int, char**)’: /<>/test/Atom_test2.C:229:21: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 229 | it = a1->beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/test/Atom_test2.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/test/Atom_test2.C: In function ‘int main(int, char**)’: /<>/test/Atom_test2.C:229:21: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 229 | it = a1->beginBond(); | ^ [ 80%] Linking CXX executable ../bin/TEST/Atom_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Atom_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Atom_test2.dir/Atom_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Atom_test2.dir/Atom_test2.C.o -o ../bin/TEST/Atom_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target Atom_test2 make -f test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test3_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target ShiftedLVMMMinimizer_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target ShiftedLVMMMinimizer_test3_autogen make -f test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftedLVMMMinimizer_test3 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build.make test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o -c /<>/build/test/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftedLVMMMinimizer_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o -c /<>/test/ShiftedLVMMMinimizer_test3.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ShiftedLVMMMinimizer_test3.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C: In function ‘int main(int, char**)’: /<>/test/ShiftedLVMMMinimizer_test3.C:69:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 69 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C: In function ‘int main(int, char**)’: /<>/test/ShiftedLVMMMinimizer_test3.C:69:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 69 | for (atit = S.beginAtom(); +atit; ++atit) | ^ /<>/test/ShiftedLVMMMinimizer_test3.C:140:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 140 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C:211:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 211 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C:282:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 282 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C:353:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 353 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C:424:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 424 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ShiftedLVMMMinimizer_test3.C:495:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 495 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/test/ShiftedLVMMMinimizer_test3.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/ShiftedLVMMMinimizer_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftedLVMMMinimizer_test3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftedLVMMMinimizer_test3.dir/ShiftedLVMMMinimizer_test3.C.o -o ../bin/TEST/ShiftedLVMMMinimizer_test3 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target ShiftedLVMMMinimizer_test3 make -f test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Pair6_12RDFIntegrator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target Pair6_12RDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Pair6_12RDFIntegrator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target Pair6_12RDFIntegrator_test_autogen make -f test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/DependInfo.cmake --color= Scanning dependencies of target Pair6_12RDFIntegrator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build.make test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Pair6_12RDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Pair6_12RDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o -c /<>/test/Pair6_12RDFIntegrator_test.C [ 80%] Linking CXX executable ../bin/TEST/Pair6_12RDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Pair6_12RDFIntegrator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/Pair6_12RDFIntegrator_test.dir/Pair6_12RDFIntegrator_test.C.o -o ../bin/TEST/Pair6_12RDFIntegrator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target Pair6_12RDFIntegrator_test make -f test/CMakeFiles/KernelPredicate_test_autogen.dir/build.make test/CMakeFiles/KernelPredicate_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KernelPredicate_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target KernelPredicate_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KernelPredicate_test_autogen.dir/build.make test/CMakeFiles/KernelPredicate_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target KernelPredicate_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/KernelPredicate_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target KernelPredicate_test_autogen make -f test/CMakeFiles/KernelPredicate_test.dir/build.make test/CMakeFiles/KernelPredicate_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KernelPredicate_test.dir/DependInfo.cmake --color= Scanning dependencies of target KernelPredicate_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KernelPredicate_test.dir/build.make test/CMakeFiles/KernelPredicate_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KernelPredicate_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/KernelPredicate_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KernelPredicate_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o -c /<>/test/KernelPredicate_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/KernelPredicate_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/predicate.h:19, from /<>/test/KernelPredicate_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/KernelPredicate_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/predicate.h:19, from /<>/test/KernelPredicate_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/KernelPredicate_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/predicate.h:19, from /<>/test/KernelPredicate_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../bin/TEST/KernelPredicate_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KernelPredicate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test_autogen/mocs_compilation.cpp.o CMakeFiles/KernelPredicate_test.dir/KernelPredicate_test.C.o -o ../bin/TEST/KernelPredicate_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 80%] Built target KernelPredicate_test make -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3BoxIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 80%] Automatic MOC for target HashGrid3BoxIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 80%] Built target HashGrid3BoxIteratorTraits_test_autogen make -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3BoxIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 80%] Building CXX object test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3BoxIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp [ 80%] Building CXX object test/CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3BoxIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o -c /<>/test/HashGrid3BoxIteratorTraits_test.C [ 81%] Linking CXX executable ../bin/TEST/HashGrid3BoxIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3BoxIteratorTraits_test.dir/HashGrid3BoxIteratorTraits_test.C.o -o ../bin/TEST/HashGrid3BoxIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target HashGrid3BoxIteratorTraits_test make -f test/CMakeFiles/RuleEvaluator_test_autogen.dir/build.make test/CMakeFiles/RuleEvaluator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RuleEvaluator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RuleEvaluator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RuleEvaluator_test_autogen.dir/build.make test/CMakeFiles/RuleEvaluator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target RuleEvaluator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RuleEvaluator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target RuleEvaluator_test_autogen make -f test/CMakeFiles/RuleEvaluator_test.dir/build.make test/CMakeFiles/RuleEvaluator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RuleEvaluator_test.dir/DependInfo.cmake --color= Scanning dependencies of target RuleEvaluator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RuleEvaluator_test.dir/build.make test/CMakeFiles/RuleEvaluator_test.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RuleEvaluator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RuleEvaluator_test_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RuleEvaluator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o -c /<>/test/RuleEvaluator_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/RuleEvaluator_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/test/RuleEvaluator_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/RuleEvaluator_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/test/RuleEvaluator_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/RuleEvaluator_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/test/RuleEvaluator_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Linking CXX executable ../bin/TEST/RuleEvaluator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RuleEvaluator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RuleEvaluator_test.dir/RuleEvaluator_test.C.o -o ../bin/TEST/RuleEvaluator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target RuleEvaluator_test make -f test/CMakeFiles/StandardPredicates_test3_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test3_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test3_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test3_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test3_autogen.dir/build.make test/CMakeFiles/StandardPredicates_test3_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target StandardPredicates_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StandardPredicates_test3_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target StandardPredicates_test3_autogen make -f test/CMakeFiles/StandardPredicates_test3.dir/build.make test/CMakeFiles/StandardPredicates_test3.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StandardPredicates_test3.dir/DependInfo.cmake --color= Scanning dependencies of target StandardPredicates_test3 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StandardPredicates_test3.dir/build.make test/CMakeFiles/StandardPredicates_test3.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o -c /<>/build/test/StandardPredicates_test3_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StandardPredicates_test3_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o -c /<>/test/StandardPredicates_test3.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/StandardPredicates_test3.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Linking CXX executable ../bin/TEST/StandardPredicates_test3 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardPredicates_test3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3_autogen/mocs_compilation.cpp.o CMakeFiles/StandardPredicates_test3.dir/StandardPredicates_test3.C.o -o ../bin/TEST/StandardPredicates_test3 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target StandardPredicates_test3 make -f test/CMakeFiles/DefaultProcessors_test_autogen.dir/build.make test/CMakeFiles/DefaultProcessors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DefaultProcessors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DefaultProcessors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DefaultProcessors_test_autogen.dir/build.make test/CMakeFiles/DefaultProcessors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target DefaultProcessors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/DefaultProcessors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target DefaultProcessors_test_autogen make -f test/CMakeFiles/DefaultProcessors_test.dir/build.make test/CMakeFiles/DefaultProcessors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DefaultProcessors_test.dir/DependInfo.cmake --color= Scanning dependencies of target DefaultProcessors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DefaultProcessors_test.dir/build.make test/CMakeFiles/DefaultProcessors_test.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DefaultProcessors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/DefaultProcessors_test_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DefaultProcessors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o -c /<>/test/DefaultProcessors_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/DefaultProcessors_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/DefaultProcessors_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/DefaultProcessors_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/DefaultProcessors_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/DefaultProcessors_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/DefaultProcessors_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/DefaultProcessors_test.C:10: /<>/include/BALL/STRUCTURE/defaultProcessors.h: In member function ‘BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(BALL::AssignRadiusProcessor&&)’: /<>/include/BALL/STRUCTURE/defaultProcessors.h:62:20: warning: implicitly-declared ‘BALL::UnaryProcessor& BALL::UnaryProcessor::operator=(const BALL::UnaryProcessor&)’ is deprecated [-Wdeprecated-copy] 62 | class BALL_EXPORT AssignRadiusProcessor | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/hashSet.h:33, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/DefaultProcessors_test.C:5: /<>/include/BALL/CONCEPT/processor.h:75:3: note: because ‘BALL::UnaryProcessor’ has user-provided ‘BALL::UnaryProcessor::UnaryProcessor(const BALL::UnaryProcessor&) [with T = BALL::Atom]’ 75 | UnaryProcessor | ^~~~~~~~~~~~~~ In file included from /<>/test/DefaultProcessors_test.C:10: /<>/include/BALL/STRUCTURE/defaultProcessors.h: In member function ‘BALL::AssignChargeProcessor& BALL::AssignChargeProcessor::operator=(BALL::AssignChargeProcessor&&)’: /<>/include/BALL/STRUCTURE/defaultProcessors.h:144:20: note: synthesized method ‘BALL::AssignRadiusProcessor& BALL::AssignRadiusProcessor::operator=(BALL::AssignRadiusProcessor&&)’ first required here 144 | class BALL_EXPORT AssignChargeProcessor | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/DefaultProcessors_test.C: In function ‘int main(int, char**)’: /<>/test/DefaultProcessors_test.C:150:74: note: synthesized method ‘BALL::AssignChargeProcessor& BALL::AssignChargeProcessor::operator=(BALL::AssignChargeProcessor&&)’ first required here 150 | acp = AssignChargeProcessor(BALL_TEST_DATA_PATH(DefaultProcessor_test.1)); | ^ [ 81%] Linking CXX executable ../bin/TEST/DefaultProcessors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DefaultProcessors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test_autogen/mocs_compilation.cpp.o CMakeFiles/DefaultProcessors_test.dir/DefaultProcessors_test.C.o -o ../bin/TEST/DefaultProcessors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target DefaultProcessors_test make -f test/CMakeFiles/String_test5_autogen.dir/build.make test/CMakeFiles/String_test5_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test5_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target String_test5_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test5_autogen.dir/build.make test/CMakeFiles/String_test5_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target String_test5 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/String_test5_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target String_test5_autogen make -f test/CMakeFiles/String_test5.dir/build.make test/CMakeFiles/String_test5.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/String_test5.dir/DependInfo.cmake --color= Scanning dependencies of target String_test5 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/String_test5.dir/build.make test/CMakeFiles/String_test5.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/String_test5.dir/String_test5_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test5_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test5.dir/String_test5_autogen/mocs_compilation.cpp.o -c /<>/build/test/String_test5_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/String_test5.dir/String_test5.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/String_test5_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/String_test5.dir/String_test5.C.o -c /<>/test/String_test5.C [ 81%] Linking CXX executable ../bin/TEST/String_test5 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/String_test5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/String_test5.dir/String_test5_autogen/mocs_compilation.cpp.o CMakeFiles/String_test5.dir/String_test5.C.o -o ../bin/TEST/String_test5 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target String_test5 make -f test/CMakeFiles/MolmecSupport_test_autogen.dir/build.make test/CMakeFiles/MolmecSupport_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MolmecSupport_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MolmecSupport_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MolmecSupport_test_autogen.dir/build.make test/CMakeFiles/MolmecSupport_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target MolmecSupport_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MolmecSupport_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target MolmecSupport_test_autogen make -f test/CMakeFiles/MolmecSupport_test.dir/build.make test/CMakeFiles/MolmecSupport_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MolmecSupport_test.dir/DependInfo.cmake --color= Scanning dependencies of target MolmecSupport_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MolmecSupport_test.dir/build.make test/CMakeFiles/MolmecSupport_test.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MolmecSupport_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MolmecSupport_test_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MolmecSupport_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o -c /<>/test/MolmecSupport_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16, from /<>/test/MolmecSupport_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Linking CXX executable ../bin/TEST/MolmecSupport_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolmecSupport_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test_autogen/mocs_compilation.cpp.o CMakeFiles/MolmecSupport_test.dir/MolmecSupport_test.C.o -o ../bin/TEST/MolmecSupport_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target MolmecSupport_test make -f test/CMakeFiles/KCFFile_test_autogen.dir/build.make test/CMakeFiles/KCFFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KCFFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target KCFFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KCFFile_test_autogen.dir/build.make test/CMakeFiles/KCFFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target KCFFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/KCFFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target KCFFile_test_autogen make -f test/CMakeFiles/KCFFile_test.dir/build.make test/CMakeFiles/KCFFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KCFFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target KCFFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KCFFile_test.dir/build.make test/CMakeFiles/KCFFile_test.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KCFFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/KCFFile_test_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KCFFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o -c /<>/test/KCFFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/KCFFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/test/KCFFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/KCFFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/test/KCFFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/KCFFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/test/KCFFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Linking CXX executable ../bin/TEST/KCFFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KCFFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KCFFile_test.dir/KCFFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/KCFFile_test.dir/KCFFile_test.C.o -o ../bin/TEST/KCFFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 81%] Built target KCFFile_test make -f test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RandomCoilShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 81%] Automatic MOC for target RandomCoilShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RandomCoilShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 81%] Built target RandomCoilShiftProcessor_test_autogen make -f test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RandomCoilShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target RandomCoilShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build.make test/CMakeFiles/RandomCoilShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 81%] Building CXX object test/CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RandomCoilShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp [ 81%] Building CXX object test/CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RandomCoilShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o -c /<>/test/RandomCoilShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/test/RandomCoilShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/TEST/RandomCoilShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomCoilShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/RandomCoilShiftProcessor_test.dir/RandomCoilShiftProcessor_test.C.o -o ../bin/TEST/RandomCoilShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target RandomCoilShiftProcessor_test make -f test/CMakeFiles/Fragment_test_autogen.dir/build.make test/CMakeFiles/Fragment_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Fragment_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Fragment_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Fragment_test_autogen.dir/build.make test/CMakeFiles/Fragment_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target Fragment_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Fragment_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target Fragment_test_autogen make -f test/CMakeFiles/Fragment_test.dir/build.make test/CMakeFiles/Fragment_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Fragment_test.dir/DependInfo.cmake --color= Scanning dependencies of target Fragment_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Fragment_test.dir/build.make test/CMakeFiles/Fragment_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Fragment_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Fragment_test_autogen/mocs_compilation.cpp [ 82%] Building CXX object test/CMakeFiles/Fragment_test.dir/Fragment_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Fragment_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Fragment_test.dir/Fragment_test.C.o -c /<>/test/Fragment_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/Fragment_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/TEST/Fragment_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fragment_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Fragment_test.dir/Fragment_test_autogen/mocs_compilation.cpp.o CMakeFiles/Fragment_test.dir/Fragment_test.C.o -o ../bin/TEST/Fragment_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target Fragment_test make -f test/CMakeFiles/ForEach_test_autogen.dir/build.make test/CMakeFiles/ForEach_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ForEach_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ForEach_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ForEach_test_autogen.dir/build.make test/CMakeFiles/ForEach_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target ForEach_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ForEach_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target ForEach_test_autogen make -f test/CMakeFiles/ForEach_test.dir/build.make test/CMakeFiles/ForEach_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ForEach_test.dir/DependInfo.cmake --color= Scanning dependencies of target ForEach_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ForEach_test.dir/build.make test/CMakeFiles/ForEach_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ForEach_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ForEach_test_autogen/mocs_compilation.cpp [ 82%] Building CXX object test/CMakeFiles/ForEach_test.dir/ForEach_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ForEach_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForEach_test.dir/ForEach_test.C.o -c /<>/test/ForEach_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:28:61: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 28 | for (molecule_iterator = (molecule_container).beginMolecule(); \ | ^ /<>/test/ForEach_test.C:103:2: note: in expansion of macro ‘BALL_FOREACH_MOLECULE’ 103 | BALL_FOREACH_MOLECULE(s1, mi) test += mi->getName(); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:28:61: note: synthesized method ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ first required here 28 | for (molecule_iterator = (molecule_container).beginMolecule(); \ | ^ /<>/test/ForEach_test.C:103:2: note: in expansion of macro ‘BALL_FOREACH_MOLECULE’ 103 | BALL_FOREACH_MOLECULE(s1, mi) test += mi->getName(); | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:40:61: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 40 | for (fragment_iterator = (fragment_container).beginFragment(); \ | ^ /<>/test/ForEach_test.C:111:2: note: in expansion of macro ‘BALL_FOREACH_FRAGMENT’ 111 | BALL_FOREACH_FRAGMENT(s1, fi) test += fi->getName(); | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Fragment; Position = BALL::BidirectionalIterator; Traits = BALL::FragmentIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::FragmentIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::FragmentIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::FragmentIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::FragmentIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Fragment; Position = BALL::BidirectionalIterator; Traits = BALL::FragmentIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:40:61: note: synthesized method ‘BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>& BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::FragmentIteratorTraits>&)’ first required here 40 | for (fragment_iterator = (fragment_container).beginFragment(); \ | ^ /<>/test/ForEach_test.C:111:2: note: in expansion of macro ‘BALL_FOREACH_FRAGMENT’ 111 | BALL_FOREACH_FRAGMENT(s1, fi) test += fi->getName(); | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:52:69: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 52 | for (atom_container_iterator = (atom_containers).beginAtomContainer(); \ | ^ /<>/test/ForEach_test.C:119:2: note: in expansion of macro ‘BALL_FOREACH_ATOMCONTAINER’ 119 | BALL_FOREACH_ATOMCONTAINER(s1, aci) test += aci->getName(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:52:69: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ first required here 52 | for (atom_container_iterator = (atom_containers).beginAtomContainer(); \ | ^ /<>/test/ForEach_test.C:119:2: note: in expansion of macro ‘BALL_FOREACH_ATOMCONTAINER’ 119 | BALL_FOREACH_ATOMCONTAINER(s1, aci) test += aci->getName(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:126:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 126 | BALL_FOREACH_ATOM(s1, ai1) test += ai1->getName(); | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:126:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 126 | BALL_FOREACH_ATOM(s1, ai1) test += ai1->getName(); | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/test/ForEach_test.C:132:2: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 132 | BALL_FOREACH_ATOM_BOND(a1, bi) test += bi->getName(); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/test/ForEach_test.C:132:2: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 132 | BALL_FOREACH_ATOM_BOND(a1, bi) test += bi->getName(); | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:139:2: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 139 | BALL_FOREACH_ATOM_PAIR(s1, ai1, ai2) { test += ai1->getName(); test += ai2->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:139:2: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 139 | BALL_FOREACH_ATOM_PAIR(s1, ai1, ai2) { test += ai1->getName(); test += ai2->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:146:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 146 | BALL_FOREACH_BOND(s1, ai1, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/ForEach_test.C:146:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 146 | BALL_FOREACH_BOND(s1, ai1, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:157:2: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 157 | BALL_FOREACH_INTERBOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/ForEach_test.C:157:2: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 157 | BALL_FOREACH_INTERBOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/ForEach_test.C:164:2: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 164 | BALL_FOREACH_INTRABOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/ForEach_test.C:164:2: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 164 | BALL_FOREACH_INTRABOND(s1, ai1, bi) { test += ai1->getName(); test += bi->getName(); } | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/include/BALL/KERNEL/forEach.h:156:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 156 | for (protein_iterator = (protein_container).beginProtein(); \ | ^ /<>/test/ForEach_test.C:172:2: note: in expansion of macro ‘BALL_FOREACH_PROTEIN’ 172 | BALL_FOREACH_PROTEIN(s1, pi) test += pi->getName(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Protein; Position = BALL::BidirectionalIterator; Traits = BALL::ProteinIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ProteinIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ProteinIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ProteinIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ProteinIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Protein; Position = BALL::BidirectionalIterator; Traits = BALL::ProteinIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:156:58: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>& BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ProteinIteratorTraits>&)’ first required here 156 | for (protein_iterator = (protein_container).beginProtein(); \ | ^ /<>/test/ForEach_test.C:172:2: note: in expansion of macro ‘BALL_FOREACH_PROTEIN’ 172 | BALL_FOREACH_PROTEIN(s1, pi) test += pi->getName(); | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:166:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 166 | for (chain_iterator = (chain_container).beginChain(); \ | ^ /<>/test/ForEach_test.C:180:2: note: in expansion of macro ‘BALL_FOREACH_CHAIN’ 180 | BALL_FOREACH_CHAIN(s1, ci) test += ci->getName(); | ^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:166:52: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ first required here 166 | for (chain_iterator = (chain_container).beginChain(); \ | ^ /<>/test/ForEach_test.C:180:2: note: in expansion of macro ‘BALL_FOREACH_CHAIN’ 180 | BALL_FOREACH_CHAIN(s1, ci) test += ci->getName(); | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:177:93: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 177 | for (secondary_structure_iterator = (secondary_structure_container).beginSecondaryStructure(); \ | ^ /<>/test/ForEach_test.C:188:2: note: in expansion of macro ‘BALL_FOREACH_SECONDARYSTRUCTURE’ 188 | BALL_FOREACH_SECONDARYSTRUCTURE(s1, ssi) test += ssi->getName(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::SecondaryStructure; Position = BALL::BidirectionalIterator; Traits = BALL::SecondaryStructureIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::SecondaryStructureIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::SecondaryStructureIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::SecondaryStructureIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::SecondaryStructure; Position = BALL::BidirectionalIterator; Traits = BALL::SecondaryStructureIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:177:93: note: synthesized method ‘BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>& BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::SecondaryStructureIteratorTraits>&)’ first required here 177 | for (secondary_structure_iterator = (secondary_structure_container).beginSecondaryStructure(); \ | ^ /<>/test/ForEach_test.C:188:2: note: in expansion of macro ‘BALL_FOREACH_SECONDARYSTRUCTURE’ 188 | BALL_FOREACH_SECONDARYSTRUCTURE(s1, ssi) test += ssi->getName(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/test/ForEach_test.C:196:2: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 196 | BALL_FOREACH_RESIDUE(s1, ri) test += ri->getName(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/test/ForEach_test.C:196:2: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 196 | BALL_FOREACH_RESIDUE(s1, ri) test += ri->getName(); | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:198:60: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 198 | for (pdb_atom_iterator = (pdb_atom_container).beginPDBAtom(); \ | ^ /<>/test/ForEach_test.C:204:2: note: in expansion of macro ‘BALL_FOREACH_PDBATOM’ 204 | BALL_FOREACH_PDBATOM(p1, pai) test += pai->getName(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/ForEach_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/ForEach_test.C:8: /<>/test/ForEach_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:198:60: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 198 | for (pdb_atom_iterator = (pdb_atom_container).beginPDBAtom(); \ | ^ /<>/test/ForEach_test.C:204:2: note: in expansion of macro ‘BALL_FOREACH_PDBATOM’ 204 | BALL_FOREACH_PDBATOM(p1, pai) test += pai->getName(); | ^~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/TEST/ForEach_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForEach_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForEach_test.dir/ForEach_test_autogen/mocs_compilation.cpp.o CMakeFiles/ForEach_test.dir/ForEach_test.C.o -o ../bin/TEST/ForEach_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target ForEach_test make -f test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target CompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CompositeIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target CompositeIteratorTraits_test_autogen make -f test/CMakeFiles/CompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CompositeIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CompositeIteratorTraits_test.dir/build.make test/CMakeFiles/CompositeIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp [ 82%] Building CXX object test/CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CompositeIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o -c /<>/test/CompositeIteratorTraits_test.C In file included from /<>/test/CompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/CompositeIteratorTraits_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/test/CompositeIteratorTraits_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/TEST/CompositeIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/CompositeIteratorTraits_test.dir/CompositeIteratorTraits_test.C.o -o ../bin/TEST/CompositeIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target CompositeIteratorTraits_test make -f test/CMakeFiles/MOL2File_test_autogen.dir/build.make test/CMakeFiles/MOL2File_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MOL2File_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MOL2File_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MOL2File_test_autogen.dir/build.make test/CMakeFiles/MOL2File_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target MOL2File_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MOL2File_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target MOL2File_test_autogen make -f test/CMakeFiles/MOL2File_test.dir/build.make test/CMakeFiles/MOL2File_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MOL2File_test.dir/DependInfo.cmake --color= Scanning dependencies of target MOL2File_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MOL2File_test.dir/build.make test/CMakeFiles/MOL2File_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MOL2File_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MOL2File_test_autogen/mocs_compilation.cpp [ 82%] Building CXX object test/CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MOL2File_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o -c /<>/test/MOL2File_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/test/MOL2File_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../bin/TEST/MOL2File_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MOL2File_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MOL2File_test.dir/MOL2File_test_autogen/mocs_compilation.cpp.o CMakeFiles/MOL2File_test.dir/MOL2File_test.C.o -o ../bin/TEST/MOL2File_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target MOL2File_test make -f test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConstBidirectionalIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target ConstBidirectionalIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConstBidirectionalIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target ConstBidirectionalIterator_test_autogen make -f test/CMakeFiles/ConstBidirectionalIterator_test.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConstBidirectionalIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConstBidirectionalIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConstBidirectionalIterator_test.dir/build.make test/CMakeFiles/ConstBidirectionalIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstBidirectionalIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp [ 82%] Building CXX object test/CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConstBidirectionalIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o -c /<>/test/ConstBidirectionalIterator_test.C [ 82%] Linking CXX executable ../bin/TEST/ConstBidirectionalIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstBidirectionalIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConstBidirectionalIterator_test.dir/ConstBidirectionalIterator_test.C.o -o ../bin/TEST/ConstBidirectionalIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 82%] Built target ConstBidirectionalIterator_test make -f test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomBondIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 82%] Automatic MOC for target AtomBondIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomBondIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 82%] Built target AtomBondIteratorTraits_test_autogen make -f test/CMakeFiles/AtomBondIteratorTraits_test.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomBondIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomBondIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomBondIteratorTraits_test.dir/build.make test/CMakeFiles/AtomBondIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 82%] Building CXX object test/CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomBondIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomBondIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o -c /<>/test/AtomBondIteratorTraits_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/AtomBondIteratorTraits_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/AtomBondIteratorTraits_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/AtomBondIteratorTraits_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/AtomBondIteratorTraits_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/AtomBondIteratorTraits_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/AtomBondIteratorTraits_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/AtomBondIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomBondIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomBondIteratorTraits_test.dir/AtomBondIteratorTraits_test.C.o -o ../bin/TEST/AtomBondIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target AtomBondIteratorTraits_test make -f test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build.make test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StdIteratorWrapper_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build.make test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target StdIteratorWrapper_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StdIteratorWrapper_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target StdIteratorWrapper_test_autogen make -f test/CMakeFiles/StdIteratorWrapper_test.dir/build.make test/CMakeFiles/StdIteratorWrapper_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StdIteratorWrapper_test.dir/DependInfo.cmake --color= Scanning dependencies of target StdIteratorWrapper_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StdIteratorWrapper_test.dir/build.make test/CMakeFiles/StdIteratorWrapper_test.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StdIteratorWrapper_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/StdIteratorWrapper_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StdIteratorWrapper_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o -c /<>/test/StdIteratorWrapper_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/StdIteratorWrapper_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/StdIteratorWrapper_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StdIteratorWrapper_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test_autogen/mocs_compilation.cpp.o CMakeFiles/StdIteratorWrapper_test.dir/StdIteratorWrapper_test.C.o -o ../bin/TEST/StdIteratorWrapper_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target StdIteratorWrapper_test make -f test/CMakeFiles/PTE_test_autogen.dir/build.make test/CMakeFiles/PTE_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PTE_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PTE_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PTE_test_autogen.dir/build.make test/CMakeFiles/PTE_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target PTE_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PTE_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target PTE_test_autogen make -f test/CMakeFiles/PTE_test.dir/build.make test/CMakeFiles/PTE_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PTE_test.dir/DependInfo.cmake --color= Scanning dependencies of target PTE_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PTE_test.dir/build.make test/CMakeFiles/PTE_test.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PTE_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PTE_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/PTE_test.dir/PTE_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PTE_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PTE_test.dir/PTE_test.C.o -c /<>/test/PTE_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/PTE_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/PTE_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTE_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PTE_test.dir/PTE_test_autogen/mocs_compilation.cpp.o CMakeFiles/PTE_test.dir/PTE_test.C.o -o ../bin/TEST/PTE_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target PTE_test make -f test/CMakeFiles/AtomVector_test_autogen.dir/build.make test/CMakeFiles/AtomVector_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomVector_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomVector_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomVector_test_autogen.dir/build.make test/CMakeFiles/AtomVector_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target AtomVector_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomVector_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target AtomVector_test_autogen make -f test/CMakeFiles/AtomVector_test.dir/build.make test/CMakeFiles/AtomVector_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomVector_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomVector_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomVector_test.dir/build.make test/CMakeFiles/AtomVector_test.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomVector_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomVector_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomVector_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o -c /<>/test/AtomVector_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/AtomVector_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/atomVector.h:15, from /<>/test/AtomVector_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/AtomVector_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/atomVector.h:15, from /<>/test/AtomVector_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/AtomVector_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/atomVector.h:15, from /<>/test/AtomVector_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/AtomVector_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomVector_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomVector_test.dir/AtomVector_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomVector_test.dir/AtomVector_test.C.o -o ../bin/TEST/AtomVector_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target AtomVector_test make -f test/CMakeFiles/HBondProcessor_test_autogen.dir/build.make test/CMakeFiles/HBondProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HBondProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HBondProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HBondProcessor_test_autogen.dir/build.make test/CMakeFiles/HBondProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target HBondProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HBondProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target HBondProcessor_test_autogen make -f test/CMakeFiles/HBondProcessor_test.dir/build.make test/CMakeFiles/HBondProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HBondProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target HBondProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HBondProcessor_test.dir/build.make test/CMakeFiles/HBondProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HBondProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HBondProcessor_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HBondProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o -c /<>/test/HBondProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/HBondProcessor_test.C:13: /<>/test/HBondProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/HBondProcessor_test.C:106:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 106 | BALL_FOREACH_BOND(sys, at_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/HBondProcessor_test.C:13: /<>/test/HBondProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/HBondProcessor_test.C:106:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 106 | BALL_FOREACH_BOND(sys, at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/HBondProcessor_test.C:106:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 106 | BALL_FOREACH_BOND(sys, at_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/test/HBondProcessor_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/HBondProcessor_test.C:13: /<>/test/HBondProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/HBondProcessor_test.C:106:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 106 | BALL_FOREACH_BOND(sys, at_it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/HBondProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HBondProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/HBondProcessor_test.dir/HBondProcessor_test.C.o -o ../bin/TEST/HBondProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target HBondProcessor_test make -f test/CMakeFiles/ForceField_test_autogen.dir/build.make test/CMakeFiles/ForceField_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ForceField_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ForceField_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ForceField_test_autogen.dir/build.make test/CMakeFiles/ForceField_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target ForceField_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ForceField_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target ForceField_test_autogen make -f test/CMakeFiles/ForceField_test.dir/build.make test/CMakeFiles/ForceField_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ForceField_test.dir/DependInfo.cmake --color= Scanning dependencies of target ForceField_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ForceField_test.dir/build.make test/CMakeFiles/ForceField_test.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ForceField_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ForceField_test_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/ForceField_test.dir/ForceField_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ForceField_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ForceField_test.dir/ForceField_test.C.o -c /<>/test/ForceField_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/test/ForceField_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/ForceField_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ForceField_test.dir/ForceField_test_autogen/mocs_compilation.cpp.o CMakeFiles/ForceField_test.dir/ForceField_test.C.o -o ../bin/TEST/ForceField_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target ForceField_test make -f test/CMakeFiles/CharmmFF_test2_autogen.dir/build.make test/CMakeFiles/CharmmFF_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CharmmFF_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CharmmFF_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CharmmFF_test2_autogen.dir/build.make test/CMakeFiles/CharmmFF_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 83%] Automatic MOC for target CharmmFF_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CharmmFF_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 83%] Built target CharmmFF_test2_autogen make -f test/CMakeFiles/CharmmFF_test2.dir/build.make test/CMakeFiles/CharmmFF_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CharmmFF_test2.dir/DependInfo.cmake --color= Scanning dependencies of target CharmmFF_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CharmmFF_test2.dir/build.make test/CMakeFiles/CharmmFF_test2.dir/build make[5]: Entering directory '/<>/build' [ 83%] Building CXX object test/CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CharmmFF_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/CharmmFF_test2_autogen/mocs_compilation.cpp [ 83%] Building CXX object test/CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CharmmFF_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o -c /<>/test/CharmmFF_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/test/CharmmFF_test2.C:13: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 83%] Linking CXX executable ../bin/TEST/CharmmFF_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CharmmFF_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2_autogen/mocs_compilation.cpp.o CMakeFiles/CharmmFF_test2.dir/CharmmFF_test2.C.o -o ../bin/TEST/CharmmFF_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 83%] Built target CharmmFF_test2 make -f test/CMakeFiles/AmberFF_test_autogen.dir/build.make test/CMakeFiles/AmberFF_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AmberFF_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AmberFF_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AmberFF_test_autogen.dir/build.make test/CMakeFiles/AmberFF_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target AmberFF_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AmberFF_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target AmberFF_test_autogen make -f test/CMakeFiles/AmberFF_test.dir/build.make test/CMakeFiles/AmberFF_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AmberFF_test.dir/DependInfo.cmake --color= Scanning dependencies of target AmberFF_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AmberFF_test.dir/build.make test/CMakeFiles/AmberFF_test.dir/build make[5]: Entering directory '/<>/build' [ 84%] Building CXX object test/CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AmberFF_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AmberFF_test_autogen/mocs_compilation.cpp [ 84%] Building CXX object test/CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AmberFF_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o -c /<>/test/AmberFF_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/AmberFF_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/test/AmberFF_test.C:12: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 84%] Linking CXX executable ../bin/TEST/AmberFF_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AmberFF_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AmberFF_test.dir/AmberFF_test_autogen/mocs_compilation.cpp.o CMakeFiles/AmberFF_test.dir/AmberFF_test.C.o -o ../bin/TEST/AmberFF_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 84%] Built target AmberFF_test make -f test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AssignBondOrderProcessor_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target AssignBondOrderProcessor_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target AssignBondOrderProcessor_test1_autogen make -f test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AssignBondOrderProcessor_test1.dir/DependInfo.cmake --color= Scanning dependencies of target AssignBondOrderProcessor_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build.make test/CMakeFiles/AssignBondOrderProcessor_test1.dir/build make[5]: Entering directory '/<>/build' [ 84%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AssignBondOrderProcessor_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp [ 84%] Building CXX object test/CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AssignBondOrderProcessor_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o -c /<>/test/AssignBondOrderProcessor_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test1.C:17: /<>/test/AssignBondOrderProcessor_test1.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test1.C:17: /<>/test/AssignBondOrderProcessor_test1.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test1.C:17: /<>/test/AssignBondOrderProcessor_test1.C: In function ‘void storeBondOrders(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:29:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 29 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/test/AssignBondOrderProcessor_test1.C: In function ‘bool compareBondOrder(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:42:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 42 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/AssignBondOrderProcessor_test1.C:17: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/AssignBondOrderProcessor_test1.C:42:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 42 | BALL_FOREACH_BOND(sys, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/test/AssignBondOrderProcessor_test1.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../bin/TEST/AssignBondOrderProcessor_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssignBondOrderProcessor_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1_autogen/mocs_compilation.cpp.o CMakeFiles/AssignBondOrderProcessor_test1.dir/AssignBondOrderProcessor_test1.C.o -o ../bin/TEST/AssignBondOrderProcessor_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 84%] Built target AssignBondOrderProcessor_test1 make -f test/CMakeFiles/MMFF94_test_autogen.dir/build.make test/CMakeFiles/MMFF94_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MMFF94_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MMFF94_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MMFF94_test_autogen.dir/build.make test/CMakeFiles/MMFF94_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target MMFF94_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MMFF94_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target MMFF94_test_autogen make -f test/CMakeFiles/MMFF94_test.dir/build.make test/CMakeFiles/MMFF94_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MMFF94_test.dir/DependInfo.cmake --color= Scanning dependencies of target MMFF94_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MMFF94_test.dir/build.make test/CMakeFiles/MMFF94_test.dir/build make[5]: Entering directory '/<>/build' [ 84%] Building CXX object test/CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MMFF94_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MMFF94_test_autogen/mocs_compilation.cpp [ 84%] Building CXX object test/CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MMFF94_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o -c /<>/test/MMFF94_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/CONCEPT/classTest.h:5, from /<>/test/MMFF94_test.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/test/MMFF94_test.C: In function ‘int main(int, char**)’: /<>/test/MMFF94_test.C:136:19: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 136 | it = s.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/test/MMFF94_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/MMFF94_test.C: In function ‘int main(int, char**)’: /<>/test/MMFF94_test.C:136:19: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 136 | it = s.beginAtom(); | ^ [ 84%] Linking CXX executable ../bin/TEST/MMFF94_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMFF94_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MMFF94_test.dir/MMFF94_test_autogen/mocs_compilation.cpp.o CMakeFiles/MMFF94_test.dir/MMFF94_test.C.o -o ../bin/TEST/MMFF94_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 84%] Built target MMFF94_test make -f test/CMakeFiles/CharmmFF_test1_autogen.dir/build.make test/CMakeFiles/CharmmFF_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CharmmFF_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CharmmFF_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CharmmFF_test1_autogen.dir/build.make test/CMakeFiles/CharmmFF_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target CharmmFF_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CharmmFF_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target CharmmFF_test1_autogen make -f test/CMakeFiles/CharmmFF_test1.dir/build.make test/CMakeFiles/CharmmFF_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CharmmFF_test1.dir/DependInfo.cmake --color= Scanning dependencies of target CharmmFF_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CharmmFF_test1.dir/build.make test/CMakeFiles/CharmmFF_test1.dir/build make[5]: Entering directory '/<>/build' [ 84%] Building CXX object test/CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CharmmFF_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/CharmmFF_test1_autogen/mocs_compilation.cpp [ 84%] Building CXX object test/CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CharmmFF_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o -c /<>/test/CharmmFF_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/test/CharmmFF_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/test/CharmmFF_test1.C:13: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:28: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:4: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 84%] Linking CXX executable ../bin/TEST/CharmmFF_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CharmmFF_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1_autogen/mocs_compilation.cpp.o CMakeFiles/CharmmFF_test1.dir/CharmmFF_test1.C.o -o ../bin/TEST/CharmmFF_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 84%] Built target CharmmFF_test1 make -f test/CMakeFiles/CCP4File_test_autogen.dir/build.make test/CMakeFiles/CCP4File_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CCP4File_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CCP4File_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CCP4File_test_autogen.dir/build.make test/CMakeFiles/CCP4File_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target CCP4File_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CCP4File_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target CCP4File_test_autogen make -f test/CMakeFiles/CCP4File_test.dir/build.make test/CMakeFiles/CCP4File_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CCP4File_test.dir/DependInfo.cmake --color= Scanning dependencies of target CCP4File_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CCP4File_test.dir/build.make test/CMakeFiles/CCP4File_test.dir/build make[5]: Entering directory '/<>/build' [ 84%] Building CXX object test/CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CCP4File_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CCP4File_test_autogen/mocs_compilation.cpp [ 84%] Building CXX object test/CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CCP4File_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o -c /<>/test/CCP4File_test.C [ 84%] Linking CXX executable ../bin/TEST/CCP4File_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CCP4File_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CCP4File_test.dir/CCP4File_test_autogen/mocs_compilation.cpp.o CMakeFiles/CCP4File_test.dir/CCP4File_test.C.o -o ../bin/TEST/CCP4File_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 84%] Built target CCP4File_test make -f test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build.make test/CMakeFiles/EnergyMinimizer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnergyMinimizer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target EnergyMinimizer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build.make test/CMakeFiles/EnergyMinimizer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 84%] Automatic MOC for target EnergyMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/EnergyMinimizer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 84%] Built target EnergyMinimizer_test_autogen make -f test/CMakeFiles/EnergyMinimizer_test.dir/build.make test/CMakeFiles/EnergyMinimizer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnergyMinimizer_test.dir/DependInfo.cmake --color= Scanning dependencies of target EnergyMinimizer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnergyMinimizer_test.dir/build.make test/CMakeFiles/EnergyMinimizer_test.dir/build make[5]: Entering directory '/<>/build' [ 86%] Building CXX object test/CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnergyMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/EnergyMinimizer_test_autogen/mocs_compilation.cpp [ 86%] Building CXX object test/CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnergyMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o -c /<>/test/EnergyMinimizer_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/EnergyMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/test/EnergyMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/EnergyMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/test/EnergyMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/EnergyMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/test/EnergyMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX executable ../bin/TEST/EnergyMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnergyMinimizer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnergyMinimizer_test.dir/EnergyMinimizer_test.C.o -o ../bin/TEST/EnergyMinimizer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 86%] Built target EnergyMinimizer_test make -f test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SteepestDescentMinimizer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 86%] Automatic MOC for target SteepestDescentMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SteepestDescentMinimizer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 86%] Built target SteepestDescentMinimizer_test_autogen make -f test/CMakeFiles/SteepestDescentMinimizer_test.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SteepestDescentMinimizer_test.dir/DependInfo.cmake --color= Scanning dependencies of target SteepestDescentMinimizer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SteepestDescentMinimizer_test.dir/build.make test/CMakeFiles/SteepestDescentMinimizer_test.dir/build make[5]: Entering directory '/<>/build' [ 86%] Building CXX object test/CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SteepestDescentMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp [ 86%] Building CXX object test/CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SteepestDescentMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o -c /<>/test/SteepestDescentMinimizer_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/SteepestDescentMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/test/SteepestDescentMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/SteepestDescentMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/test/SteepestDescentMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/SteepestDescentMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/test/SteepestDescentMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/SteepestDescentMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/SteepestDescentMinimizer_test.C:245:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 245 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/test/SteepestDescentMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/SteepestDescentMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/SteepestDescentMinimizer_test.C:245:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 245 | for (atit = S.beginAtom(); +atit; ++atit) | ^ [ 86%] Linking CXX executable ../bin/TEST/SteepestDescentMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SteepestDescentMinimizer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/SteepestDescentMinimizer_test.dir/SteepestDescentMinimizer_test.C.o -o ../bin/TEST/SteepestDescentMinimizer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 86%] Built target SteepestDescentMinimizer_test make -f test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConjugateGradientMinimizer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 86%] Automatic MOC for target ConjugateGradientMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConjugateGradientMinimizer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 86%] Built target ConjugateGradientMinimizer_test_autogen make -f test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConjugateGradientMinimizer_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConjugateGradientMinimizer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build.make test/CMakeFiles/ConjugateGradientMinimizer_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConjugateGradientMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConjugateGradientMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o -c /<>/test/ConjugateGradientMinimizer_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ConjugateGradientMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ConjugateGradientMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/ConjugateGradientMinimizer_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ConjugateGradientMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/ConjugateGradientMinimizer_test.C:410:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 410 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/ConjugateGradientMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/ConjugateGradientMinimizer_test.C:410:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 410 | for (atit = S.beginAtom(); +atit; ++atit) | ^ /<>/test/ConjugateGradientMinimizer_test.C:485:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 485 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/ConjugateGradientMinimizer_test.C:558:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 558 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/test/ConjugateGradientMinimizer_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/ConjugateGradientMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConjugateGradientMinimizer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConjugateGradientMinimizer_test.dir/ConjugateGradientMinimizer_test.C.o -o ../bin/TEST/ConjugateGradientMinimizer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target ConjugateGradientMinimizer_test make -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PCMCavFreeEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target PCMCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target PCMCavFreeEnergyProcessor_test_autogen make -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target PCMCavFreeEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build.make test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PCMCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PCMCavFreeEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o -c /<>/test/PCMCavFreeEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/test/PCMCavFreeEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/PCMCavFreeEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PCMCavFreeEnergyProcessor_test.dir/PCMCavFreeEnergyProcessor_test.C.o -o ../bin/TEST/PCMCavFreeEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target PCMCavFreeEnergyProcessor_test make -f test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target StrangLBFGSMinimizer_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target StrangLBFGSMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/StrangLBFGSMinimizer_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target StrangLBFGSMinimizer_test_autogen make -f test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/StrangLBFGSMinimizer_test.dir/DependInfo.cmake --color= Scanning dependencies of target StrangLBFGSMinimizer_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build.make test/CMakeFiles/StrangLBFGSMinimizer_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StrangLBFGSMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/StrangLBFGSMinimizer_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o -c /<>/test/StrangLBFGSMinimizer_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/StrangLBFGSMinimizer_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/test/StrangLBFGSMinimizer_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/StrangLBFGSMinimizer_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/test/StrangLBFGSMinimizer_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/test/StrangLBFGSMinimizer_test.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/test/StrangLBFGSMinimizer_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/test/StrangLBFGSMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/StrangLBFGSMinimizer_test.C:427:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 427 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/test/StrangLBFGSMinimizer_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/test/StrangLBFGSMinimizer_test.C: In function ‘int main(int, char**)’: /<>/test/StrangLBFGSMinimizer_test.C:427:26: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 427 | for (atit = S.beginAtom(); +atit; ++atit) | ^ /<>/test/StrangLBFGSMinimizer_test.C:496:26: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 496 | for (atit = S.beginAtom(); +atit; ++atit) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/test/StrangLBFGSMinimizer_test.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/StrangLBFGSMinimizer_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/StrangLBFGSMinimizer_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test_autogen/mocs_compilation.cpp.o CMakeFiles/StrangLBFGSMinimizer_test.dir/StrangLBFGSMinimizer_test.C.o -o ../bin/TEST/StrangLBFGSMinimizer_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target StrangLBFGSMinimizer_test make -f test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AnisotropyShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target AnisotropyShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AnisotropyShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target AnisotropyShiftProcessor_test_autogen make -f test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnisotropyShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target AnisotropyShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build.make test/CMakeFiles/AnisotropyShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnisotropyShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnisotropyShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o -c /<>/test/AnisotropyShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/test/AnisotropyShiftProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/AnisotropyShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnisotropyShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnisotropyShiftProcessor_test.dir/AnisotropyShiftProcessor_test.C.o -o ../bin/TEST/AnisotropyShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target AnisotropyShiftProcessor_test make -f test/CMakeFiles/Peak_test_autogen.dir/build.make test/CMakeFiles/Peak_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Peak_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Peak_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Peak_test_autogen.dir/build.make test/CMakeFiles/Peak_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target Peak_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Peak_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target Peak_test_autogen make -f test/CMakeFiles/Peak_test.dir/build.make test/CMakeFiles/Peak_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Peak_test.dir/DependInfo.cmake --color= Scanning dependencies of target Peak_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Peak_test.dir/build.make test/CMakeFiles/Peak_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Peak_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Peak_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/Peak_test.dir/Peak_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Peak_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peak_test.dir/Peak_test.C.o -c /<>/test/Peak_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Peak_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/test/Peak_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Peak_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/test/Peak_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/Peak_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/test/Peak_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/Peak_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Peak_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Peak_test.dir/Peak_test_autogen/mocs_compilation.cpp.o CMakeFiles/Peak_test.dir/Peak_test.C.o -o ../bin/TEST/Peak_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target Peak_test make -f test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3NeighborBoxItem_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target HashGrid3NeighborBoxItem_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target HashGrid3NeighborBoxItem_test_autogen make -f test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3NeighborBoxItem_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build.make test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3NeighborBoxItem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3NeighborBoxItem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o -c /<>/test/HashGrid3NeighborBoxItem_test.C [ 87%] Linking CXX executable ../bin/TEST/HashGrid3NeighborBoxItem_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3NeighborBoxItem_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3NeighborBoxItem_test.dir/HashGrid3NeighborBoxItem_test.C.o -o ../bin/TEST/HashGrid3NeighborBoxItem_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target HashGrid3NeighborBoxItem_test make -f test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ClearShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target ClearShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ClearShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target ClearShiftProcessor_test_autogen make -f test/CMakeFiles/ClearShiftProcessor_test.dir/build.make test/CMakeFiles/ClearShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClearShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target ClearShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClearShiftProcessor_test.dir/build.make test/CMakeFiles/ClearShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClearShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ClearShiftProcessor_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClearShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o -c /<>/test/ClearShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/test/ClearShiftProcessor_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/ClearShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClearShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ClearShiftProcessor_test.dir/ClearShiftProcessor_test.C.o -o ../bin/TEST/ClearShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target ClearShiftProcessor_test make -f test/CMakeFiles/NumericalSAS_test_autogen.dir/build.make test/CMakeFiles/NumericalSAS_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NumericalSAS_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NumericalSAS_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NumericalSAS_test_autogen.dir/build.make test/CMakeFiles/NumericalSAS_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target NumericalSAS_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NumericalSAS_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target NumericalSAS_test_autogen make -f test/CMakeFiles/NumericalSAS_test.dir/build.make test/CMakeFiles/NumericalSAS_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NumericalSAS_test.dir/DependInfo.cmake --color= Scanning dependencies of target NumericalSAS_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NumericalSAS_test.dir/build.make test/CMakeFiles/NumericalSAS_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NumericalSAS_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NumericalSAS_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NumericalSAS_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o -c /<>/test/NumericalSAS_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/NumericalSAS_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/test/NumericalSAS_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/NumericalSAS_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/test/NumericalSAS_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/NumericalSAS_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/test/NumericalSAS_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/NumericalSAS_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NumericalSAS_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test_autogen/mocs_compilation.cpp.o CMakeFiles/NumericalSAS_test.dir/NumericalSAS_test.C.o -o ../bin/TEST/NumericalSAS_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target NumericalSAS_test make -f test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build.make test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ResidueRotamerSet_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build.make test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target ResidueRotamerSet_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ResidueRotamerSet_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target ResidueRotamerSet_test_autogen make -f test/CMakeFiles/ResidueRotamerSet_test.dir/build.make test/CMakeFiles/ResidueRotamerSet_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ResidueRotamerSet_test.dir/DependInfo.cmake --color= Scanning dependencies of target ResidueRotamerSet_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ResidueRotamerSet_test.dir/build.make test/CMakeFiles/ResidueRotamerSet_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ResidueRotamerSet_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ResidueRotamerSet_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ResidueRotamerSet_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o -c /<>/test/ResidueRotamerSet_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/ResidueRotamerSet_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/test/ResidueRotamerSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/ResidueRotamerSet_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/test/ResidueRotamerSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/ResidueRotamerSet_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/test/ResidueRotamerSet_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/ResidueRotamerSet_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResidueRotamerSet_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueRotamerSet_test.dir/ResidueRotamerSet_test.C.o -o ../bin/TEST/ResidueRotamerSet_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target ResidueRotamerSet_test make -f test/CMakeFiles/Path_test_autogen.dir/build.make test/CMakeFiles/Path_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Path_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Path_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Path_test_autogen.dir/build.make test/CMakeFiles/Path_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target Path_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Path_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target Path_test_autogen make -f test/CMakeFiles/Path_test.dir/build.make test/CMakeFiles/Path_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Path_test.dir/DependInfo.cmake --color= Scanning dependencies of target Path_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Path_test.dir/build.make test/CMakeFiles/Path_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Path_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Path_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/Path_test.dir/Path_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Path_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Path_test.dir/Path_test.C.o -c /<>/test/Path_test.C [ 87%] Linking CXX executable ../bin/TEST/Path_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Path_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Path_test.dir/Path_test_autogen/mocs_compilation.cpp.o CMakeFiles/Path_test.dir/Path_test.C.o -o ../bin/TEST/Path_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target Path_test make -f test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/EFShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EFShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target EFShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/EFShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target EFShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/EFShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target EFShiftProcessor_test_autogen make -f test/CMakeFiles/EFShiftProcessor_test.dir/build.make test/CMakeFiles/EFShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EFShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target EFShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EFShiftProcessor_test.dir/build.make test/CMakeFiles/EFShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EFShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/EFShiftProcessor_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EFShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o -c /<>/test/EFShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/test/EFShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/EFShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EFShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/EFShiftProcessor_test.dir/EFShiftProcessor_test.C.o -o ../bin/TEST/EFShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target EFShiftProcessor_test make -f test/CMakeFiles/TrajectoryFile_test_autogen.dir/build.make test/CMakeFiles/TrajectoryFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TrajectoryFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TrajectoryFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TrajectoryFile_test_autogen.dir/build.make test/CMakeFiles/TrajectoryFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target TrajectoryFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/TrajectoryFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target TrajectoryFile_test_autogen make -f test/CMakeFiles/TrajectoryFile_test.dir/build.make test/CMakeFiles/TrajectoryFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TrajectoryFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target TrajectoryFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TrajectoryFile_test.dir/build.make test/CMakeFiles/TrajectoryFile_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TrajectoryFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TrajectoryFile_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TrajectoryFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o -c /<>/test/TrajectoryFile_test.C [ 87%] Linking CXX executable ../bin/TEST/TrajectoryFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TrajectoryFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/TrajectoryFile_test.dir/TrajectoryFile_test.C.o -o ../bin/TEST/TrajectoryFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target TrajectoryFile_test make -f test/CMakeFiles/Protein_test_autogen.dir/build.make test/CMakeFiles/Protein_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Protein_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Protein_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Protein_test_autogen.dir/build.make test/CMakeFiles/Protein_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 87%] Automatic MOC for target Protein_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Protein_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 87%] Built target Protein_test_autogen make -f test/CMakeFiles/Protein_test.dir/build.make test/CMakeFiles/Protein_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Protein_test.dir/DependInfo.cmake --color= Scanning dependencies of target Protein_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Protein_test.dir/build.make test/CMakeFiles/Protein_test.dir/build make[5]: Entering directory '/<>/build' [ 87%] Building CXX object test/CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Protein_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Protein_test_autogen/mocs_compilation.cpp [ 87%] Building CXX object test/CMakeFiles/Protein_test.dir/Protein_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Protein_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Protein_test.dir/Protein_test.C.o -c /<>/test/Protein_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Protein_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Linking CXX executable ../bin/TEST/Protein_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Protein_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Protein_test.dir/Protein_test_autogen/mocs_compilation.cpp.o CMakeFiles/Protein_test.dir/Protein_test.C.o -o ../bin/TEST/Protein_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 87%] Built target Protein_test make -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target JohnsonBoveyShiftProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target JohnsonBoveyShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target JohnsonBoveyShiftProcessor_test_autogen make -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target JohnsonBoveyShiftProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build.make test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/JohnsonBoveyShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/JohnsonBoveyShiftProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o -c /<>/test/JohnsonBoveyShiftProcessor_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12, from /<>/test/JohnsonBoveyShiftProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../bin/TEST/JohnsonBoveyShiftProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/JohnsonBoveyShiftProcessor_test.dir/JohnsonBoveyShiftProcessor_test.C.o -o ../bin/TEST/JohnsonBoveyShiftProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target JohnsonBoveyShiftProcessor_test make -f test/CMakeFiles/Descriptor_test_autogen.dir/build.make test/CMakeFiles/Descriptor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Descriptor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Descriptor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Descriptor_test_autogen.dir/build.make test/CMakeFiles/Descriptor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target Descriptor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Descriptor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target Descriptor_test_autogen make -f test/CMakeFiles/Descriptor_test.dir/build.make test/CMakeFiles/Descriptor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Descriptor_test.dir/DependInfo.cmake --color= Scanning dependencies of target Descriptor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Descriptor_test.dir/build.make test/CMakeFiles/Descriptor_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Descriptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Descriptor_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Descriptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o -c /<>/test/Descriptor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/test/Descriptor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../bin/TEST/Descriptor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Descriptor_test.dir/Descriptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/Descriptor_test.dir/Descriptor_test.C.o -o ../bin/TEST/Descriptor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target Descriptor_test make -f test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3DataItem_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target HashGrid3DataItem_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGrid3DataItem_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target HashGrid3DataItem_test_autogen make -f test/CMakeFiles/HashGrid3DataItem_test.dir/build.make test/CMakeFiles/HashGrid3DataItem_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3DataItem_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3DataItem_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3DataItem_test.dir/build.make test/CMakeFiles/HashGrid3DataItem_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3DataItem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGrid3DataItem_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3DataItem_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o -c /<>/test/HashGrid3DataItem_test.C [ 88%] Linking CXX executable ../bin/TEST/HashGrid3DataItem_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3DataItem_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3DataItem_test.dir/HashGrid3DataItem_test.C.o -o ../bin/TEST/HashGrid3DataItem_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target HashGrid3DataItem_test make -f test/CMakeFiles/ShiftModule_test_autogen.dir/build.make test/CMakeFiles/ShiftModule_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftModule_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftModule_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftModule_test_autogen.dir/build.make test/CMakeFiles/ShiftModule_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target ShiftModule_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ShiftModule_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target ShiftModule_test_autogen make -f test/CMakeFiles/ShiftModule_test.dir/build.make test/CMakeFiles/ShiftModule_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ShiftModule_test.dir/DependInfo.cmake --color= Scanning dependencies of target ShiftModule_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ShiftModule_test.dir/build.make test/CMakeFiles/ShiftModule_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftModule_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ShiftModule_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ShiftModule_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o -c /<>/test/ShiftModule_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/test/ShiftModule_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../bin/TEST/ShiftModule_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShiftModule_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ShiftModule_test.dir/ShiftModule_test_autogen/mocs_compilation.cpp.o CMakeFiles/ShiftModule_test.dir/ShiftModule_test.C.o -o ../bin/TEST/ShiftModule_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target ShiftModule_test make -f test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build.make test/CMakeFiles/SurfaceProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build.make test/CMakeFiles/SurfaceProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SurfaceProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SurfaceProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target SurfaceProcessor_test_autogen make -f test/CMakeFiles/SurfaceProcessor_test.dir/build.make test/CMakeFiles/SurfaceProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceProcessor_test.dir/build.make test/CMakeFiles/SurfaceProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SurfaceProcessor_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o -c /<>/test/SurfaceProcessor_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/SurfaceProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/STRUCTURE/reducedSurface.h:13, from /<>/include/BALL/STRUCTURE/surfaceProcessor.h:12, from /<>/test/SurfaceProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/SurfaceProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/STRUCTURE/reducedSurface.h:13, from /<>/include/BALL/STRUCTURE/surfaceProcessor.h:12, from /<>/test/SurfaceProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/test/SurfaceProcessor_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/STRUCTURE/reducedSurface.h:13, from /<>/include/BALL/STRUCTURE/surfaceProcessor.h:12, from /<>/test/SurfaceProcessor_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../bin/TEST/SurfaceProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceProcessor_test.dir/SurfaceProcessor_test.C.o -o ../bin/TEST/SurfaceProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target SurfaceProcessor_test make -f test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3DataIteratorTraits_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/build.make test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target HashGrid3DataIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HashGrid3DataIteratorTraits_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target HashGrid3DataIteratorTraits_test_autogen make -f test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/DependInfo.cmake --color= Scanning dependencies of target HashGrid3DataIteratorTraits_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/build.make test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3DataIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HashGrid3DataIteratorTraits_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test.C.o -c /<>/test/HashGrid3DataIteratorTraits_test.C [ 88%] Linking CXX executable ../bin/TEST/HashGrid3DataIteratorTraits_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HashGrid3DataIteratorTraits_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test_autogen/mocs_compilation.cpp.o CMakeFiles/HashGrid3DataIteratorTraits_test.dir/HashGrid3DataIteratorTraits_test.C.o -o ../bin/TEST/HashGrid3DataIteratorTraits_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target HashGrid3DataIteratorTraits_test make -f test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build.make test/CMakeFiles/AmiraMeshFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AmiraMeshFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AmiraMeshFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build.make test/CMakeFiles/AmiraMeshFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target AmiraMeshFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AmiraMeshFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target AmiraMeshFile_test_autogen make -f test/CMakeFiles/AmiraMeshFile_test.dir/build.make test/CMakeFiles/AmiraMeshFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AmiraMeshFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target AmiraMeshFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AmiraMeshFile_test.dir/build.make test/CMakeFiles/AmiraMeshFile_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AmiraMeshFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AmiraMeshFile_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AmiraMeshFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o -c /<>/test/AmiraMeshFile_test.C [ 88%] Linking CXX executable ../bin/TEST/AmiraMeshFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AmiraMeshFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/AmiraMeshFile_test.dir/AmiraMeshFile_test.C.o -o ../bin/TEST/AmiraMeshFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target AmiraMeshFile_test make -f test/CMakeFiles/Nucleotide_test_autogen.dir/build.make test/CMakeFiles/Nucleotide_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Nucleotide_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Nucleotide_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Nucleotide_test_autogen.dir/build.make test/CMakeFiles/Nucleotide_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target Nucleotide_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Nucleotide_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target Nucleotide_test_autogen make -f test/CMakeFiles/Nucleotide_test.dir/build.make test/CMakeFiles/Nucleotide_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Nucleotide_test.dir/DependInfo.cmake --color= Scanning dependencies of target Nucleotide_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Nucleotide_test.dir/build.make test/CMakeFiles/Nucleotide_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Nucleotide_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Nucleotide_test_autogen/mocs_compilation.cpp [ 88%] Building CXX object test/CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Nucleotide_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o -c /<>/test/Nucleotide_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/test/Nucleotide_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../bin/TEST/Nucleotide_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Nucleotide_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Nucleotide_test.dir/Nucleotide_test_autogen/mocs_compilation.cpp.o CMakeFiles/Nucleotide_test.dir/Nucleotide_test.C.o -o ../bin/TEST/Nucleotide_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 88%] Built target Nucleotide_test make -f test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/build.make test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NormalizeNamesProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/build.make test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 88%] Automatic MOC for target NormalizeNamesProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NormalizeNamesProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 88%] Built target NormalizeNamesProcessor_test_autogen make -f test/CMakeFiles/NormalizeNamesProcessor_test.dir/build.make test/CMakeFiles/NormalizeNamesProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NormalizeNamesProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target NormalizeNamesProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NormalizeNamesProcessor_test.dir/build.make test/CMakeFiles/NormalizeNamesProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 88%] Building CXX object test/CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NormalizeNamesProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp [ 89%] Building CXX object test/CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NormalizeNamesProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o -c /<>/test/NormalizeNamesProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NormalizeNamesProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 89%] Linking CXX executable ../bin/TEST/NormalizeNamesProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalizeNamesProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/NormalizeNamesProcessor_test.dir/NormalizeNamesProcessor_test.C.o -o ../bin/TEST/NormalizeNamesProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 89%] Built target NormalizeNamesProcessor_test make -f test/CMakeFiles/AntechamberFile_test_autogen.dir/build.make test/CMakeFiles/AntechamberFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AntechamberFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AntechamberFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AntechamberFile_test_autogen.dir/build.make test/CMakeFiles/AntechamberFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 89%] Automatic MOC for target AntechamberFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AntechamberFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 89%] Built target AntechamberFile_test_autogen make -f test/CMakeFiles/AntechamberFile_test.dir/build.make test/CMakeFiles/AntechamberFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AntechamberFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target AntechamberFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AntechamberFile_test.dir/build.make test/CMakeFiles/AntechamberFile_test.dir/build make[5]: Entering directory '/<>/build' [ 89%] Building CXX object test/CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AntechamberFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AntechamberFile_test_autogen/mocs_compilation.cpp [ 89%] Building CXX object test/CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AntechamberFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o -c /<>/test/AntechamberFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AntechamberFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 90%] Linking CXX executable ../bin/TEST/AntechamberFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AntechamberFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/AntechamberFile_test.dir/AntechamberFile_test.C.o -o ../bin/TEST/AntechamberFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 90%] Built target AntechamberFile_test make -f test/CMakeFiles/ExpressionParser_test_autogen.dir/build.make test/CMakeFiles/ExpressionParser_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionParser_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionParser_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionParser_test_autogen.dir/build.make test/CMakeFiles/ExpressionParser_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 91%] Automatic MOC for target ExpressionParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ExpressionParser_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 91%] Built target ExpressionParser_test_autogen make -f test/CMakeFiles/ExpressionParser_test.dir/build.make test/CMakeFiles/ExpressionParser_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ExpressionParser_test.dir/DependInfo.cmake --color= Scanning dependencies of target ExpressionParser_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ExpressionParser_test.dir/build.make test/CMakeFiles/ExpressionParser_test.dir/build make[5]: Entering directory '/<>/build' [ 91%] Building CXX object test/CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ExpressionParser_test_autogen/mocs_compilation.cpp [ 91%] Building CXX object test/CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ExpressionParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o -c /<>/test/ExpressionParser_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/ExpressionParser_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/ExpressionParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/ExpressionParser_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/ExpressionParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/test/ExpressionParser_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/test/ExpressionParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../bin/TEST/ExpressionParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpressionParser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/ExpressionParser_test.dir/ExpressionParser_test.C.o -o ../bin/TEST/ExpressionParser_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 91%] Built target ExpressionParser_test make -f test/CMakeFiles/Bruker1DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker1DFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bruker1DFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Bruker1DFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bruker1DFile_test_autogen.dir/build.make test/CMakeFiles/Bruker1DFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 91%] Automatic MOC for target Bruker1DFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Bruker1DFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 91%] Built target Bruker1DFile_test_autogen make -f test/CMakeFiles/Bruker1DFile_test.dir/build.make test/CMakeFiles/Bruker1DFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bruker1DFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target Bruker1DFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bruker1DFile_test.dir/build.make test/CMakeFiles/Bruker1DFile_test.dir/build make[5]: Entering directory '/<>/build' [ 91%] Building CXX object test/CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bruker1DFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Bruker1DFile_test_autogen/mocs_compilation.cpp [ 91%] Building CXX object test/CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bruker1DFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o -c /<>/test/Bruker1DFile_test.C [ 91%] Linking CXX executable ../bin/TEST/Bruker1DFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bruker1DFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bruker1DFile_test.dir/Bruker1DFile_test.C.o -o ../bin/TEST/Bruker1DFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 91%] Built target Bruker1DFile_test make -f test/CMakeFiles/INIFile_test2_autogen.dir/build.make test/CMakeFiles/INIFile_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/INIFile_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target INIFile_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/INIFile_test2_autogen.dir/build.make test/CMakeFiles/INIFile_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [ 91%] Automatic MOC for target INIFile_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/INIFile_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 91%] Built target INIFile_test2_autogen make -f test/CMakeFiles/INIFile_test2.dir/build.make test/CMakeFiles/INIFile_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/INIFile_test2.dir/DependInfo.cmake --color= Scanning dependencies of target INIFile_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/INIFile_test2.dir/build.make test/CMakeFiles/INIFile_test2.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/INIFile_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/INIFile_test2_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/INIFile_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o -c /<>/test/INIFile_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/ItemCollector.h:6, from /<>/test/INIFile_test2.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/INIFile_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFile_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/INIFile_test2.dir/INIFile_test2_autogen/mocs_compilation.cpp.o CMakeFiles/INIFile_test2.dir/INIFile_test2.C.o -o ../bin/TEST/INIFile_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target INIFile_test2 make -f test/CMakeFiles/ResourceFile_test_autogen.dir/build.make test/CMakeFiles/ResourceFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ResourceFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ResourceFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ResourceFile_test_autogen.dir/build.make test/CMakeFiles/ResourceFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target ResourceFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ResourceFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target ResourceFile_test_autogen make -f test/CMakeFiles/ResourceFile_test.dir/build.make test/CMakeFiles/ResourceFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ResourceFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target ResourceFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ResourceFile_test.dir/build.make test/CMakeFiles/ResourceFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ResourceFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ResourceFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ResourceFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o -c /<>/test/ResourceFile_test.C [ 93%] Linking CXX executable ../bin/TEST/ResourceFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResourceFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResourceFile_test.dir/ResourceFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/ResourceFile_test.dir/ResourceFile_test.C.o -o ../bin/TEST/ResourceFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target ResourceFile_test make -f test/CMakeFiles/GenericMolFile_test_autogen.dir/build.make test/CMakeFiles/GenericMolFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GenericMolFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GenericMolFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GenericMolFile_test_autogen.dir/build.make test/CMakeFiles/GenericMolFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target GenericMolFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/GenericMolFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target GenericMolFile_test_autogen make -f test/CMakeFiles/GenericMolFile_test.dir/build.make test/CMakeFiles/GenericMolFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/GenericMolFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target GenericMolFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/GenericMolFile_test.dir/build.make test/CMakeFiles/GenericMolFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GenericMolFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/GenericMolFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/GenericMolFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o -c /<>/test/GenericMolFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/GenericMolFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/GenericMolFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericMolFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/GenericMolFile_test.dir/GenericMolFile_test.C.o -o ../bin/TEST/GenericMolFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target GenericMolFile_test make -f test/CMakeFiles/Residue_test1_autogen.dir/build.make test/CMakeFiles/Residue_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Residue_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Residue_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Residue_test1_autogen.dir/build.make test/CMakeFiles/Residue_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Residue_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Residue_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Residue_test1_autogen make -f test/CMakeFiles/Residue_test1.dir/build.make test/CMakeFiles/Residue_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Residue_test1.dir/DependInfo.cmake --color= Scanning dependencies of target Residue_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Residue_test1.dir/build.make test/CMakeFiles/Residue_test1.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Residue_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/Residue_test1_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Residue_test1.dir/Residue_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Residue_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test1.dir/Residue_test1.C.o -c /<>/test/Residue_test1.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test1.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/Residue_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Residue_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Residue_test1.dir/Residue_test1_autogen/mocs_compilation.cpp.o CMakeFiles/Residue_test1.dir/Residue_test1.C.o -o ../bin/TEST/Residue_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Residue_test1 make -f test/CMakeFiles/TimeStamp_test_autogen.dir/build.make test/CMakeFiles/TimeStamp_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TimeStamp_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TimeStamp_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TimeStamp_test_autogen.dir/build.make test/CMakeFiles/TimeStamp_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target TimeStamp_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/TimeStamp_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target TimeStamp_test_autogen make -f test/CMakeFiles/TimeStamp_test.dir/build.make test/CMakeFiles/TimeStamp_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TimeStamp_test.dir/DependInfo.cmake --color= Scanning dependencies of target TimeStamp_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TimeStamp_test.dir/build.make test/CMakeFiles/TimeStamp_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TimeStamp_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TimeStamp_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TimeStamp_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o -c /<>/test/TimeStamp_test.C [ 93%] Linking CXX executable ../bin/TEST/TimeStamp_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TimeStamp_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TimeStamp_test.dir/TimeStamp_test_autogen/mocs_compilation.cpp.o CMakeFiles/TimeStamp_test.dir/TimeStamp_test.C.o -o ../bin/TEST/TimeStamp_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target TimeStamp_test make -f test/CMakeFiles/HINFile_test_autogen.dir/build.make test/CMakeFiles/HINFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HINFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target HINFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HINFile_test_autogen.dir/build.make test/CMakeFiles/HINFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target HINFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/HINFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target HINFile_test_autogen make -f test/CMakeFiles/HINFile_test.dir/build.make test/CMakeFiles/HINFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/HINFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target HINFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/HINFile_test.dir/build.make test/CMakeFiles/HINFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HINFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/HINFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/HINFile_test.dir/HINFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/HINFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/HINFile_test.dir/HINFile_test.C.o -c /<>/test/HINFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/HINFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/HINFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/HINFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/HINFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/HINFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/test/HINFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/HINFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/HINFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/HINFile_test.dir/HINFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/HINFile_test.dir/HINFile_test.C.o -o ../bin/TEST/HINFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target HINFile_test make -f test/CMakeFiles/MOLFile_test_autogen.dir/build.make test/CMakeFiles/MOLFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MOLFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MOLFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MOLFile_test_autogen.dir/build.make test/CMakeFiles/MOLFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target MOLFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/MOLFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target MOLFile_test_autogen make -f test/CMakeFiles/MOLFile_test.dir/build.make test/CMakeFiles/MOLFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/MOLFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target MOLFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/MOLFile_test.dir/build.make test/CMakeFiles/MOLFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MOLFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/MOLFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/MOLFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o -c /<>/test/MOLFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/MOLFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/test/MOLFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/MOLFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/test/MOLFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/MOLFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/test/MOLFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/MOLFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/MOLFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MOLFile_test.dir/MOLFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/MOLFile_test.dir/MOLFile_test.C.o -o ../bin/TEST/MOLFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target MOLFile_test make -f test/CMakeFiles/SmartsParser_test_autogen.dir/build.make test/CMakeFiles/SmartsParser_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmartsParser_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SmartsParser_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmartsParser_test_autogen.dir/build.make test/CMakeFiles/SmartsParser_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SmartsParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SmartsParser_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SmartsParser_test_autogen make -f test/CMakeFiles/SmartsParser_test.dir/build.make test/CMakeFiles/SmartsParser_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmartsParser_test.dir/DependInfo.cmake --color= Scanning dependencies of target SmartsParser_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmartsParser_test.dir/build.make test/CMakeFiles/SmartsParser_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmartsParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SmartsParser_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmartsParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o -c /<>/test/SmartsParser_test.C [ 93%] Linking CXX executable ../bin/TEST/SmartsParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmartsParser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmartsParser_test.dir/SmartsParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmartsParser_test.dir/SmartsParser_test.C.o -o ../bin/TEST/SmartsParser_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SmartsParser_test make -f test/CMakeFiles/SDFile_test_autogen.dir/build.make test/CMakeFiles/SDFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SDFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SDFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SDFile_test_autogen.dir/build.make test/CMakeFiles/SDFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SDFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SDFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SDFile_test_autogen make -f test/CMakeFiles/SDFile_test.dir/build.make test/CMakeFiles/SDFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SDFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target SDFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SDFile_test.dir/build.make test/CMakeFiles/SDFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SDFile_test.dir/SDFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SDFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDFile_test.dir/SDFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SDFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SDFile_test.dir/SDFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SDFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDFile_test.dir/SDFile_test.C.o -c /<>/test/SDFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/SDFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SDFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/SDFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SDFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/test/SDFile_test.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SDFile_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/SDFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SDFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SDFile_test.dir/SDFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/SDFile_test.dir/SDFile_test.C.o -o ../bin/TEST/SDFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SDFile_test make -f test/CMakeFiles/Gradient_test_autogen.dir/build.make test/CMakeFiles/Gradient_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Gradient_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Gradient_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Gradient_test_autogen.dir/build.make test/CMakeFiles/Gradient_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Gradient_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Gradient_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Gradient_test_autogen make -f test/CMakeFiles/Gradient_test.dir/build.make test/CMakeFiles/Gradient_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Gradient_test.dir/DependInfo.cmake --color= Scanning dependencies of target Gradient_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Gradient_test.dir/build.make test/CMakeFiles/Gradient_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Gradient_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Gradient_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Gradient_test.dir/Gradient_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Gradient_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Gradient_test.dir/Gradient_test.C.o -c /<>/test/Gradient_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Gradient_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/gradient.h:20, from /<>/test/Gradient_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Gradient_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/gradient.h:20, from /<>/test/Gradient_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/Gradient_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/gradient.h:20, from /<>/test/Gradient_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/Gradient_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Gradient_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Gradient_test.dir/Gradient_test_autogen/mocs_compilation.cpp.o CMakeFiles/Gradient_test.dir/Gradient_test.C.o -o ../bin/TEST/Gradient_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Gradient_test make -f test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build.make test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BuildBondsProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build.make test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target BuildBondsProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BuildBondsProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target BuildBondsProcessor_test_autogen make -f test/CMakeFiles/BuildBondsProcessor_test.dir/build.make test/CMakeFiles/BuildBondsProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BuildBondsProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target BuildBondsProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BuildBondsProcessor_test.dir/build.make test/CMakeFiles/BuildBondsProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BuildBondsProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BuildBondsProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BuildBondsProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o -c /<>/test/BuildBondsProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BuildBondsProcessor_test.C:12: /<>/test/BuildBondsProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 91 | BALL_FOREACH_BOND(*mit, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BuildBondsProcessor_test.C:12: /<>/test/BuildBondsProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 91 | BALL_FOREACH_BOND(*mit, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 91 | BALL_FOREACH_BOND(*mit, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/test/BuildBondsProcessor_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/BuildBondsProcessor_test.C:12: /<>/test/BuildBondsProcessor_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/test/BuildBondsProcessor_test.C:91:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 91 | BALL_FOREACH_BOND(*mit, ait, bit) | ^~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/BuildBondsProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BuildBondsProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BuildBondsProcessor_test.dir/BuildBondsProcessor_test.C.o -o ../bin/TEST/BuildBondsProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target BuildBondsProcessor_test make -f test/CMakeFiles/NMRStarFile_test_autogen.dir/build.make test/CMakeFiles/NMRStarFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NMRStarFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NMRStarFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NMRStarFile_test_autogen.dir/build.make test/CMakeFiles/NMRStarFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target NMRStarFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NMRStarFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target NMRStarFile_test_autogen make -f test/CMakeFiles/NMRStarFile_test.dir/build.make test/CMakeFiles/NMRStarFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NMRStarFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target NMRStarFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NMRStarFile_test.dir/build.make test/CMakeFiles/NMRStarFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NMRStarFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NMRStarFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NMRStarFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o -c /<>/test/NMRStarFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/test/NMRStarFile_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/NMRStarFile_test.C:5: /<>/test/NMRStarFile_test.C: In function ‘int main(int, char**)’: /<>/include/BALL/CONCEPT/classTest.h:326:2: warning: macro expands to multiple statements [-Wmultistatement-macros] 326 | TEST::this_test = fabs((a) - (b)) < TEST::precision; \ | ^~~~ /<>/test/NMRStarFile_test.C:464:5: note: in expansion of macro ‘TEST_REAL_EQUAL’ 464 | TEST_REAL_EQUAL(atom->getProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT).getFloat(), 4.804f) | ^~~~~~~~~~~~~~~ /<>/test/NMRStarFile_test.C:463:4: note: some parts of macro expansion are not guarded by this ‘if’ clause 463 | if (atom->hasProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT)) | ^~ In file included from /<>/test/NMRStarFile_test.C:5: /<>/include/BALL/CONCEPT/classTest.h:326:2: warning: macro expands to multiple statements [-Wmultistatement-macros] 326 | TEST::this_test = fabs((a) - (b)) < TEST::precision; \ | ^~~~ /<>/test/NMRStarFile_test.C:478:5: note: in expansion of macro ‘TEST_REAL_EQUAL’ 478 | TEST_REAL_EQUAL(atom2->getProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT).getFloat(), 118.691f) | ^~~~~~~~~~~~~~~ /<>/test/NMRStarFile_test.C:477:4: note: some parts of macro expansion are not guarded by this ‘if’ clause 477 | if (atom2->hasProperty(ShiftModule::PROPERTY__EXPERIMENTAL__SHIFT)) | ^~ [ 93%] Linking CXX executable ../bin/TEST/NMRStarFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NMRStarFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/NMRStarFile_test.dir/NMRStarFile_test.C.o -o ../bin/TEST/NMRStarFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target NMRStarFile_test make -f test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build.make test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceDescriptors_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build.make test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SurfaceDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SurfaceDescriptors_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SurfaceDescriptors_test_autogen make -f test/CMakeFiles/SurfaceDescriptors_test.dir/build.make test/CMakeFiles/SurfaceDescriptors_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SurfaceDescriptors_test.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceDescriptors_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SurfaceDescriptors_test.dir/build.make test/CMakeFiles/SurfaceDescriptors_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SurfaceDescriptors_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SurfaceDescriptors_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o -c /<>/test/SurfaceDescriptors_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/test/SurfaceDescriptors_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/SurfaceDescriptors_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceDescriptors_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test_autogen/mocs_compilation.cpp.o CMakeFiles/SurfaceDescriptors_test.dir/SurfaceDescriptors_test.C.o -o ../bin/TEST/SurfaceDescriptors_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SurfaceDescriptors_test make -f test/CMakeFiles/PDBInfo_test_autogen.dir/build.make test/CMakeFiles/PDBInfo_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBInfo_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBInfo_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBInfo_test_autogen.dir/build.make test/CMakeFiles/PDBInfo_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target PDBInfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PDBInfo_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target PDBInfo_test_autogen make -f test/CMakeFiles/PDBInfo_test.dir/build.make test/CMakeFiles/PDBInfo_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBInfo_test.dir/DependInfo.cmake --color= Scanning dependencies of target PDBInfo_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBInfo_test.dir/build.make test/CMakeFiles/PDBInfo_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/PDBInfo_test.dir/PDBInfo_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBInfo_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBInfo_test.dir/PDBInfo_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PDBInfo_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBInfo_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o -c /<>/test/PDBInfo_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12, from /<>/test/PDBInfo_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/PDBInfo_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBInfo_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBInfo_test.dir/PDBInfo_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBInfo_test.dir/PDBInfo_test.C.o -o ../bin/TEST/PDBInfo_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target PDBInfo_test make -f test/CMakeFiles/XYZFile_test_autogen.dir/build.make test/CMakeFiles/XYZFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/XYZFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target XYZFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/XYZFile_test_autogen.dir/build.make test/CMakeFiles/XYZFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target XYZFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/XYZFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target XYZFile_test_autogen make -f test/CMakeFiles/XYZFile_test.dir/build.make test/CMakeFiles/XYZFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/XYZFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target XYZFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/XYZFile_test.dir/build.make test/CMakeFiles/XYZFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/XYZFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/XYZFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/XYZFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o -c /<>/test/XYZFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/XYZFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/XYZFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/XYZFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/XYZFile_test.dir/XYZFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/XYZFile_test.dir/XYZFile_test.C.o -o ../bin/TEST/XYZFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target XYZFile_test make -f test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SCWRLRotamerFile_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SCWRLRotamerFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SCWRLRotamerFile_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SCWRLRotamerFile_test_autogen make -f test/CMakeFiles/SCWRLRotamerFile_test.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SCWRLRotamerFile_test.dir/DependInfo.cmake --color= Scanning dependencies of target SCWRLRotamerFile_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SCWRLRotamerFile_test.dir/build.make test/CMakeFiles/SCWRLRotamerFile_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SCWRLRotamerFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SCWRLRotamerFile_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o -c /<>/test/SCWRLRotamerFile_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/test/SCWRLRotamerFile_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/SCWRLRotamerFile_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SCWRLRotamerFile_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test_autogen/mocs_compilation.cpp.o CMakeFiles/SCWRLRotamerFile_test.dir/SCWRLRotamerFile_test.C.o -o ../bin/TEST/SCWRLRotamerFile_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SCWRLRotamerFile_test make -f test/CMakeFiles/AddCartoonModel_test_autogen.dir/build.make test/CMakeFiles/AddCartoonModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AddCartoonModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AddCartoonModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AddCartoonModel_test_autogen.dir/build.make test/CMakeFiles/AddCartoonModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target AddCartoonModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AddCartoonModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target AddCartoonModel_test_autogen make -f test/CMakeFiles/AddCartoonModel_test.dir/build.make test/CMakeFiles/AddCartoonModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AddCartoonModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target AddCartoonModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AddCartoonModel_test.dir/build.make test/CMakeFiles/AddCartoonModel_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/AddCartoonModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AddCartoonModel_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/<>/build/test/AddCartoonModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -isystem /usr/include/riscv64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/riscv64-linux-gnu/qt5/QtWidgets -isystem /usr/include/riscv64-linux-gnu/qt5/QtGui -isystem /usr/include/riscv64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/riscv64-linux-gnu/qt5/QtTest -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o -c /<>/test/AddCartoonModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:19, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/VIEW/MODELS/modelProcessor.h:11, from /<>/include/BALL/VIEW/MODELS/backboneModel.h:11, from /<>/include/BALL/VIEW/MODELS/cartoonModel.h:11, from /<>/test/AddCartoonModel_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/AddCartoonModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddCartoonModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/AddCartoonModel_test.dir/AddCartoonModel_test.C.o -o ../bin/TEST/AddCartoonModel_test -Wl,-rpath,/<>/build/lib ../lib/libVIEW.so.1.5 -lpthread -lGLEW ../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 -lpython3.8 -lpthread /usr/lib/riscv64-linux-gnu/libQt5OpenGL.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5PrintSupport.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Test.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Widgets.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Gui.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lGL -lGLU make[5]: Leaving directory '/<>/build' [ 93%] Built target AddCartoonModel_test make -f test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build.make test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomicContactEnergy_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build.make test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target AtomicContactEnergy_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomicContactEnergy_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target AtomicContactEnergy_test_autogen make -f test/CMakeFiles/AtomicContactEnergy_test.dir/build.make test/CMakeFiles/AtomicContactEnergy_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomicContactEnergy_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomicContactEnergy_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomicContactEnergy_test.dir/build.make test/CMakeFiles/AtomicContactEnergy_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomicContactEnergy_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomicContactEnergy_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomicContactEnergy_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o -c /<>/test/AtomicContactEnergy_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/AtomicContactEnergy_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/AtomicContactEnergy_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomicContactEnergy_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomicContactEnergy_test.dir/AtomicContactEnergy_test.C.o -o ../bin/TEST/AtomicContactEnergy_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target AtomicContactEnergy_test make -f test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ComposedEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target ComposedEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ComposedEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target ComposedEnergyProcessor_test_autogen make -f test/CMakeFiles/ComposedEnergyProcessor_test.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ComposedEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target ComposedEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ComposedEnergyProcessor_test.dir/build.make test/CMakeFiles/ComposedEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ComposedEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ComposedEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o -c /<>/test/ComposedEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/test/ComposedEnergyProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/ComposedEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ComposedEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ComposedEnergyProcessor_test.dir/ComposedEnergyProcessor_test.C.o -o ../bin/TEST/ComposedEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target ComposedEnergyProcessor_test make -f test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AddHydrogenProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target AddHydrogenProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AddHydrogenProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target AddHydrogenProcessor_test_autogen make -f test/CMakeFiles/AddHydrogenProcessor_test.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AddHydrogenProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target AddHydrogenProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AddHydrogenProcessor_test.dir/build.make test/CMakeFiles/AddHydrogenProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AddHydrogenProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AddHydrogenProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o -c /<>/test/AddHydrogenProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/AddHydrogenProcessor_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/AddHydrogenProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddHydrogenProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/AddHydrogenProcessor_test.dir/AddHydrogenProcessor_test.C.o -o ../bin/TEST/AddHydrogenProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target AddHydrogenProcessor_test make -f test/CMakeFiles/Selectable_test_autogen.dir/build.make test/CMakeFiles/Selectable_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Selectable_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Selectable_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Selectable_test_autogen.dir/build.make test/CMakeFiles/Selectable_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Selectable_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Selectable_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Selectable_test_autogen make -f test/CMakeFiles/Selectable_test.dir/build.make test/CMakeFiles/Selectable_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Selectable_test.dir/DependInfo.cmake --color= Scanning dependencies of target Selectable_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Selectable_test.dir/build.make test/CMakeFiles/Selectable_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Selectable_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Selectable_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Selectable_test.dir/Selectable_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Selectable_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Selectable_test.dir/Selectable_test.C.o -c /<>/test/Selectable_test.C [ 93%] Linking CXX executable ../bin/TEST/Selectable_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selectable_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Selectable_test.dir/Selectable_test_autogen/mocs_compilation.cpp.o CMakeFiles/Selectable_test.dir/Selectable_test.C.o -o ../bin/TEST/Selectable_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Selectable_test make -f test/CMakeFiles/AtomBijection_test_autogen.dir/build.make test/CMakeFiles/AtomBijection_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomBijection_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomBijection_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomBijection_test_autogen.dir/build.make test/CMakeFiles/AtomBijection_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target AtomBijection_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomBijection_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target AtomBijection_test_autogen make -f test/CMakeFiles/AtomBijection_test.dir/build.make test/CMakeFiles/AtomBijection_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomBijection_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomBijection_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomBijection_test.dir/build.make test/CMakeFiles/AtomBijection_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomBijection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomBijection_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomBijection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o -c /<>/test/AtomBijection_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/test/AtomBijection_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/AtomBijection_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomBijection_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomBijection_test.dir/AtomBijection_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomBijection_test.dir/AtomBijection_test.C.o -o ../bin/TEST/AtomBijection_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target AtomBijection_test make -f test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryFingerprintMethods_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target BinaryFingerprintMethods_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BinaryFingerprintMethods_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target BinaryFingerprintMethods_test_autogen make -f test/CMakeFiles/BinaryFingerprintMethods_test.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BinaryFingerprintMethods_test.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryFingerprintMethods_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BinaryFingerprintMethods_test.dir/build.make test/CMakeFiles/BinaryFingerprintMethods_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BinaryFingerprintMethods_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BinaryFingerprintMethods_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o -c /<>/test/BinaryFingerprintMethods_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/BinaryFingerprintMethods_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/BinaryFingerprintMethods_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/BinaryFingerprintMethods_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/BinaryFingerprintMethods_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/test/BinaryFingerprintMethods_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/BinaryFingerprintMethods_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/BinaryFingerprintMethods_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryFingerprintMethods_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test_autogen/mocs_compilation.cpp.o CMakeFiles/BinaryFingerprintMethods_test.dir/BinaryFingerprintMethods_test.C.o -o ../bin/TEST/BinaryFingerprintMethods_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target BinaryFingerprintMethods_test make -f test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build.make test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BindingPocketProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build.make test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target BindingPocketProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BindingPocketProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target BindingPocketProcessor_test_autogen make -f test/CMakeFiles/BindingPocketProcessor_test.dir/build.make test/CMakeFiles/BindingPocketProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BindingPocketProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target BindingPocketProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BindingPocketProcessor_test.dir/build.make test/CMakeFiles/BindingPocketProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BindingPocketProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/BindingPocketProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BindingPocketProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o -c /<>/test/BindingPocketProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/test/BindingPocketProcessor_test.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/BindingPocketProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BindingPocketProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/BindingPocketProcessor_test.dir/BindingPocketProcessor_test.C.o -o ../bin/TEST/BindingPocketProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target BindingPocketProcessor_test make -f test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build.make test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AnalyticalGeometry_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build.make test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target AnalyticalGeometry_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AnalyticalGeometry_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target AnalyticalGeometry_test_autogen make -f test/CMakeFiles/AnalyticalGeometry_test.dir/build.make test/CMakeFiles/AnalyticalGeometry_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AnalyticalGeometry_test.dir/DependInfo.cmake --color= Scanning dependencies of target AnalyticalGeometry_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AnalyticalGeometry_test.dir/build.make test/CMakeFiles/AnalyticalGeometry_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnalyticalGeometry_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AnalyticalGeometry_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AnalyticalGeometry_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o -c /<>/test/AnalyticalGeometry_test.C [ 93%] Linking CXX executable ../bin/TEST/AnalyticalGeometry_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AnalyticalGeometry_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test_autogen/mocs_compilation.cpp.o CMakeFiles/AnalyticalGeometry_test.dir/AnalyticalGeometry_test.C.o -o ../bin/TEST/AnalyticalGeometry_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target AnalyticalGeometry_test make -f test/CMakeFiles/TransformationProcessor_test_autogen.dir/build.make test/CMakeFiles/TransformationProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TransformationProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TransformationProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TransformationProcessor_test_autogen.dir/build.make test/CMakeFiles/TransformationProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target TransformationProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/TransformationProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target TransformationProcessor_test_autogen make -f test/CMakeFiles/TransformationProcessor_test.dir/build.make test/CMakeFiles/TransformationProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/TransformationProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target TransformationProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/TransformationProcessor_test.dir/build.make test/CMakeFiles/TransformationProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TransformationProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/TransformationProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/TransformationProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o -c /<>/test/TransformationProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TransformationProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TransformationProcessor_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TransformationProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TransformationProcessor_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/test/TransformationProcessor_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/test/TransformationProcessor_test.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/TransformationProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/TransformationProcessor_test.dir/TransformationProcessor_test.C.o -o ../bin/TEST/TransformationProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target TransformationProcessor_test make -f test/CMakeFiles/KPLSModel_test_autogen.dir/build.make test/CMakeFiles/KPLSModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KPLSModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target KPLSModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KPLSModel_test_autogen.dir/build.make test/CMakeFiles/KPLSModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target KPLSModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/KPLSModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target KPLSModel_test_autogen make -f test/CMakeFiles/KPLSModel_test.dir/build.make test/CMakeFiles/KPLSModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/KPLSModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target KPLSModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/KPLSModel_test.dir/build.make test/CMakeFiles/KPLSModel_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KPLSModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/KPLSModel_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/KPLSModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o -c /<>/test/KPLSModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/KPLSModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/KPLSModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/KPLSModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/KPLSModel_test.dir/KPLSModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/KPLSModel_test.dir/KPLSModel_test.C.o -o ../bin/TEST/KPLSModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target KPLSModel_test make -f test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectedComponentsProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target ConnectedComponentsProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ConnectedComponentsProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target ConnectedComponentsProcessor_test_autogen make -f test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ConnectedComponentsProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectedComponentsProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build.make test/CMakeFiles/ConnectedComponentsProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectedComponentsProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ConnectedComponentsProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o -c /<>/test/ConnectedComponentsProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/test/ConnectedComponentsProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/ConnectedComponentsProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectedComponentsProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ConnectedComponentsProcessor_test.dir/ConnectedComponentsProcessor_test.C.o -o ../bin/TEST/ConnectedComponentsProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target ConnectedComponentsProcessor_test make -f test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DisulfidBondProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target DisulfidBondProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/DisulfidBondProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target DisulfidBondProcessor_test_autogen make -f test/CMakeFiles/DisulfidBondProcessor_test.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/DisulfidBondProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target DisulfidBondProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/DisulfidBondProcessor_test.dir/build.make test/CMakeFiles/DisulfidBondProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DisulfidBondProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/DisulfidBondProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o -c /<>/test/DisulfidBondProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/test/DisulfidBondProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/DisulfidBondProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DisulfidBondProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/DisulfidBondProcessor_test.dir/DisulfidBondProcessor_test.C.o -o ../bin/TEST/DisulfidBondProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target DisulfidBondProcessor_test make -f test/CMakeFiles/Options_test_autogen.dir/build.make test/CMakeFiles/Options_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Options_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Options_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Options_test_autogen.dir/build.make test/CMakeFiles/Options_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Options_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Options_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Options_test_autogen make -f test/CMakeFiles/Options_test.dir/build.make test/CMakeFiles/Options_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Options_test.dir/DependInfo.cmake --color= Scanning dependencies of target Options_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Options_test.dir/build.make test/CMakeFiles/Options_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Options_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Options_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Options_test.dir/Options_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Options_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Options_test.dir/Options_test.C.o -c /<>/test/Options_test.C [ 93%] Linking CXX executable ../bin/TEST/Options_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Options_test.dir/Options_test_autogen/mocs_compilation.cpp.o CMakeFiles/Options_test.dir/Options_test.C.o -o ../bin/TEST/Options_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Options_test make -f test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build.make test/CMakeFiles/EnumeratorIndex_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnumeratorIndex_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target EnumeratorIndex_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build.make test/CMakeFiles/EnumeratorIndex_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target EnumeratorIndex_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/EnumeratorIndex_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target EnumeratorIndex_test_autogen make -f test/CMakeFiles/EnumeratorIndex_test.dir/build.make test/CMakeFiles/EnumeratorIndex_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/EnumeratorIndex_test.dir/DependInfo.cmake --color= Scanning dependencies of target EnumeratorIndex_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/EnumeratorIndex_test.dir/build.make test/CMakeFiles/EnumeratorIndex_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnumeratorIndex_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/EnumeratorIndex_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/EnumeratorIndex_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o -c /<>/test/EnumeratorIndex_test.C /<>/test/EnumeratorIndex_test.C: In function ‘int main(int, char**)’: /<>/test/EnumeratorIndex_test.C:222:24: warning: implicitly-declared ‘BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)’ is deprecated [-Wdeprecated-copy] 222 | EnumeratorIndex ei2(ei); | ^ In file included from /<>/test/EnumeratorIndex_test.C:9: /<>/include/BALL/CONCEPT/enumerator.h:91:26: note: because ‘BALL::EnumeratorIndex’ has user-provided ‘const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)’ 91 | const EnumeratorIndex& operator = (const EnumeratorIndex& rhs); | ^~~~~~~~ /<>/test/EnumeratorIndex_test.C:280:24: warning: implicitly-declared ‘BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)’ is deprecated [-Wdeprecated-copy] 280 | EnumeratorIndex ei2(ei); | ^ In file included from /<>/test/EnumeratorIndex_test.C:9: /<>/include/BALL/CONCEPT/enumerator.h:91:26: note: because ‘BALL::EnumeratorIndex’ has user-provided ‘const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)’ 91 | const EnumeratorIndex& operator = (const EnumeratorIndex& rhs); | ^~~~~~~~ /<>/test/EnumeratorIndex_test.C:336:28: warning: implicitly-declared ‘BALL::EnumeratorIndex::EnumeratorIndex(const BALL::EnumeratorIndex&)’ is deprecated [-Wdeprecated-copy] 336 | EnumeratorIndex ei_equal(ei); | ^ In file included from /<>/test/EnumeratorIndex_test.C:9: /<>/include/BALL/CONCEPT/enumerator.h:91:26: note: because ‘BALL::EnumeratorIndex’ has user-provided ‘const BALL::EnumeratorIndex& BALL::EnumeratorIndex::operator=(const BALL::EnumeratorIndex&)’ 91 | const EnumeratorIndex& operator = (const EnumeratorIndex& rhs); | ^~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/EnumeratorIndex_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/EnumeratorIndex_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test_autogen/mocs_compilation.cpp.o CMakeFiles/EnumeratorIndex_test.dir/EnumeratorIndex_test.C.o -o ../bin/TEST/EnumeratorIndex_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target EnumeratorIndex_test make -f test/CMakeFiles/NBModel_test_autogen.dir/build.make test/CMakeFiles/NBModel_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NBModel_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target NBModel_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NBModel_test_autogen.dir/build.make test/CMakeFiles/NBModel_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target NBModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/NBModel_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target NBModel_test_autogen make -f test/CMakeFiles/NBModel_test.dir/build.make test/CMakeFiles/NBModel_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/NBModel_test.dir/DependInfo.cmake --color= Scanning dependencies of target NBModel_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/NBModel_test.dir/build.make test/CMakeFiles/NBModel_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NBModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/NBModel_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/NBModel_test.dir/NBModel_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/NBModel_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/NBModel_test.dir/NBModel_test.C.o -c /<>/test/NBModel_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/test/NBModel_test.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/NBModel_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/NBModel_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/NBModel_test.dir/NBModel_test_autogen/mocs_compilation.cpp.o CMakeFiles/NBModel_test.dir/NBModel_test.C.o -o ../bin/TEST/NBModel_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target NBModel_test make -f test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SecondaryStructureProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SecondaryStructureProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SecondaryStructureProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SecondaryStructureProcessor_test_autogen make -f test/CMakeFiles/SecondaryStructureProcessor_test.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SecondaryStructureProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target SecondaryStructureProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SecondaryStructureProcessor_test.dir/build.make test/CMakeFiles/SecondaryStructureProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SecondaryStructureProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SecondaryStructureProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o -c /<>/test/SecondaryStructureProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SecondaryStructureProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/test/SecondaryStructureProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SecondaryStructureProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/test/SecondaryStructureProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SecondaryStructureProcessor_test.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/test/SecondaryStructureProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/SecondaryStructureProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SecondaryStructureProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SecondaryStructureProcessor_test.dir/SecondaryStructureProcessor_test.C.o -o ../bin/TEST/SecondaryStructureProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SecondaryStructureProcessor_test make -f test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleMolecularGraph_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target SimpleMolecularGraph_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SimpleMolecularGraph_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target SimpleMolecularGraph_test_autogen make -f test/CMakeFiles/SimpleMolecularGraph_test.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SimpleMolecularGraph_test.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleMolecularGraph_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SimpleMolecularGraph_test.dir/build.make test/CMakeFiles/SimpleMolecularGraph_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleMolecularGraph_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SimpleMolecularGraph_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o -c /<>/test/SimpleMolecularGraph_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:13, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:13, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:13, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of ‘BALL::TSimpleMolecularGraph::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]’: /<>/test/SimpleMolecularGraph_test.C:55:27: required from here /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:11: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 228 | for (ai = molecule.beginAtom(); +ai; ++ai) | ~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 230 | for (bi = ai->beginBond(); +bi; ++bi) | ~~~^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:9, from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/test/SimpleMolecularGraph_test.C:9: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:12: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 230 | for (bi = ai->beginBond(); +bi; ++bi) | ~~~^~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/SimpleMolecularGraph_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleMolecularGraph_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleMolecularGraph_test.dir/SimpleMolecularGraph_test.C.o -o ../bin/TEST/SimpleMolecularGraph_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target SimpleMolecularGraph_test make -f test/CMakeFiles/Circle3_test_autogen.dir/build.make test/CMakeFiles/Circle3_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Circle3_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Circle3_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Circle3_test_autogen.dir/build.make test/CMakeFiles/Circle3_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Circle3_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Circle3_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Circle3_test_autogen make -f test/CMakeFiles/Circle3_test.dir/build.make test/CMakeFiles/Circle3_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Circle3_test.dir/DependInfo.cmake --color= Scanning dependencies of target Circle3_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Circle3_test.dir/build.make test/CMakeFiles/Circle3_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Circle3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Circle3_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Circle3_test.dir/Circle3_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Circle3_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Circle3_test.dir/Circle3_test.C.o -c /<>/test/Circle3_test.C [ 93%] Linking CXX executable ../bin/TEST/Circle3_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Circle3_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Circle3_test.dir/Circle3_test_autogen/mocs_compilation.cpp.o CMakeFiles/Circle3_test.dir/Circle3_test.C.o -o ../bin/TEST/Circle3_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Circle3_test make -f test/CMakeFiles/Peptides_test_autogen.dir/build.make test/CMakeFiles/Peptides_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Peptides_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Peptides_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Peptides_test_autogen.dir/build.make test/CMakeFiles/Peptides_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target Peptides_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Peptides_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target Peptides_test_autogen make -f test/CMakeFiles/Peptides_test.dir/build.make test/CMakeFiles/Peptides_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Peptides_test.dir/DependInfo.cmake --color= Scanning dependencies of target Peptides_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Peptides_test.dir/build.make test/CMakeFiles/Peptides_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Peptides_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Peptides_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/Peptides_test.dir/Peptides_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Peptides_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Peptides_test.dir/Peptides_test.C.o -c /<>/test/Peptides_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/test/Peptides_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/TEST/Peptides_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Peptides_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Peptides_test.dir/Peptides_test_autogen/mocs_compilation.cpp.o CMakeFiles/Peptides_test.dir/Peptides_test.C.o -o ../bin/TEST/Peptides_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target Peptides_test make -f test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build.make test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RadialDistributionFunction_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build.make test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 93%] Automatic MOC for target RadialDistributionFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RadialDistributionFunction_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 93%] Built target RadialDistributionFunction_test_autogen make -f test/CMakeFiles/RadialDistributionFunction_test.dir/build.make test/CMakeFiles/RadialDistributionFunction_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RadialDistributionFunction_test.dir/DependInfo.cmake --color= Scanning dependencies of target RadialDistributionFunction_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RadialDistributionFunction_test.dir/build.make test/CMakeFiles/RadialDistributionFunction_test.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RadialDistributionFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RadialDistributionFunction_test_autogen/mocs_compilation.cpp [ 93%] Building CXX object test/CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RadialDistributionFunction_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o -c /<>/test/RadialDistributionFunction_test.C [ 93%] Linking CXX executable ../bin/TEST/RadialDistributionFunction_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RadialDistributionFunction_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test_autogen/mocs_compilation.cpp.o CMakeFiles/RadialDistributionFunction_test.dir/RadialDistributionFunction_test.C.o -o ../bin/TEST/RadialDistributionFunction_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 93%] Built target RadialDistributionFunction_test make -f test/CMakeFiles/File_test1_autogen.dir/build.make test/CMakeFiles/File_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test 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test/CMakeFiles/File_test1.dir/build make[5]: Entering directory '/<>/build' [ 93%] Building CXX object test/CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/File_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/File_test1_autogen/mocs_compilation.cpp [ 94%] Building CXX object test/CMakeFiles/File_test1.dir/File_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/File_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/File_test1.dir/File_test1.C.o -c /<>/test/File_test1.C /<>/test/File_test1.C: In function ‘int main(int, char**)’: /<>/test/File_test1.C:41:8: warning: variable ‘f2’ set but not used [-Wunused-but-set-variable] 41 | File* f2; | ^~ [ 94%] Linking CXX executable ../bin/TEST/File_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/File_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/File_test1.dir/File_test1_autogen/mocs_compilation.cpp.o CMakeFiles/File_test1.dir/File_test1.C.o -o ../bin/TEST/File_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 94%] Built target File_test1 make -f test/CMakeFiles/PDBRecords_test_autogen.dir/build.make test/CMakeFiles/PDBRecords_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBRecords_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBRecords_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBRecords_test_autogen.dir/build.make test/CMakeFiles/PDBRecords_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 95%] Automatic MOC for target PDBRecords_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PDBRecords_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 95%] Built target PDBRecords_test_autogen make -f test/CMakeFiles/PDBRecords_test.dir/build.make test/CMakeFiles/PDBRecords_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PDBRecords_test.dir/DependInfo.cmake --color= Scanning dependencies of target PDBRecords_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PDBRecords_test.dir/build.make test/CMakeFiles/PDBRecords_test.dir/build make[5]: Entering directory '/<>/build' [ 95%] Building CXX object test/CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBRecords_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PDBRecords_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PDBRecords_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o -c /<>/test/PDBRecords_test.C [ 95%] Linking CXX executable ../bin/TEST/PDBRecords_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBRecords_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBRecords_test.dir/PDBRecords_test_autogen/mocs_compilation.cpp.o CMakeFiles/PDBRecords_test.dir/PDBRecords_test.C.o -o ../bin/TEST/PDBRecords_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target PDBRecords_test make -f test/CMakeFiles/RDFParameter_test_autogen.dir/build.make test/CMakeFiles/RDFParameter_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test 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-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFParameter_test.dir/RDFParameter_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RDFParameter_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RDFParameter_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o -c /<>/test/RDFParameter_test.C [ 95%] Linking CXX executable ../bin/TEST/RDFParameter_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFParameter_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFParameter_test.dir/RDFParameter_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFParameter_test.dir/RDFParameter_test.C.o -o ../bin/TEST/RDFParameter_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target RDFParameter_test make -f test/CMakeFiles/RDFSection_test_autogen.dir/build.make test/CMakeFiles/RDFSection_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build 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'/<>/build' make -f test/CMakeFiles/RDFSection_test.dir/build.make test/CMakeFiles/RDFSection_test.dir/build make[5]: Entering directory '/<>/build' [ 95%] Building CXX object test/CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RDFSection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RDFSection_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RDFSection_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o -c /<>/test/RDFSection_test.C [ 95%] Linking CXX executable ../bin/TEST/RDFSection_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFSection_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFSection_test.dir/RDFSection_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFSection_test.dir/RDFSection_test.C.o -o ../bin/TEST/RDFSection_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target RDFSection_test make -f test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ReconstructFragmentProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 95%] Automatic MOC for target ReconstructFragmentProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ReconstructFragmentProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 95%] Built target ReconstructFragmentProcessor_test_autogen make -f test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ReconstructFragmentProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target ReconstructFragmentProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build.make test/CMakeFiles/ReconstructFragmentProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 95%] Building CXX object test/CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ReconstructFragmentProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ReconstructFragmentProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o -c /<>/test/ReconstructFragmentProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19, from /<>/test/ReconstructFragmentProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../bin/TEST/ReconstructFragmentProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReconstructFragmentProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/ReconstructFragmentProcessor_test.dir/ReconstructFragmentProcessor_test.C.o -o ../bin/TEST/ReconstructFragmentProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target ReconstructFragmentProcessor_test make -f test/CMakeFiles/AtomIterator_test_autogen.dir/build.make test/CMakeFiles/AtomIterator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomIterator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AtomIterator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomIterator_test_autogen.dir/build.make test/CMakeFiles/AtomIterator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 95%] Automatic MOC for target AtomIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/AtomIterator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 95%] Built target AtomIterator_test_autogen make -f test/CMakeFiles/AtomIterator_test.dir/build.make test/CMakeFiles/AtomIterator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/AtomIterator_test.dir/DependInfo.cmake --color= Scanning dependencies of target AtomIterator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/AtomIterator_test.dir/build.make test/CMakeFiles/AtomIterator_test.dir/build make[5]: Entering directory '/<>/build' [ 95%] Building CXX object test/CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/AtomIterator_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/AtomIterator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o -c /<>/test/AtomIterator_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/test/AtomIterator_test.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../bin/TEST/AtomIterator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/AtomIterator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AtomIterator_test.dir/AtomIterator_test_autogen/mocs_compilation.cpp.o CMakeFiles/AtomIterator_test.dir/AtomIterator_test.C.o -o ../bin/TEST/AtomIterator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target AtomIterator_test make -f test/CMakeFiles/SmilesParser_test_autogen.dir/build.make test/CMakeFiles/SmilesParser_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmilesParser_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SmilesParser_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmilesParser_test_autogen.dir/build.make test/CMakeFiles/SmilesParser_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 95%] Automatic MOC for target SmilesParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SmilesParser_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 95%] Built target SmilesParser_test_autogen make -f test/CMakeFiles/SmilesParser_test.dir/build.make test/CMakeFiles/SmilesParser_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmilesParser_test.dir/DependInfo.cmake --color= Scanning dependencies of target SmilesParser_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmilesParser_test.dir/build.make test/CMakeFiles/SmilesParser_test.dir/build make[5]: Entering directory '/<>/build' [ 95%] Building CXX object test/CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmilesParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SmilesParser_test_autogen/mocs_compilation.cpp [ 95%] Building CXX object test/CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmilesParser_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o -c /<>/test/SmilesParser_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/test/SmilesParser_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../bin/TEST/SmilesParser_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmilesParser_test.dir/SmilesParser_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmilesParser_test.dir/SmilesParser_test.C.o -o ../bin/TEST/SmilesParser_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 95%] Built target SmilesParser_test make -f test/CMakeFiles/SmartsMatcher_test_autogen.dir/build.make test/CMakeFiles/SmartsMatcher_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmartsMatcher_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SmartsMatcher_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmartsMatcher_test_autogen.dir/build.make test/CMakeFiles/SmartsMatcher_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 96%] Automatic MOC for target SmartsMatcher_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SmartsMatcher_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 96%] Built target SmartsMatcher_test_autogen make -f test/CMakeFiles/SmartsMatcher_test.dir/build.make test/CMakeFiles/SmartsMatcher_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SmartsMatcher_test.dir/DependInfo.cmake --color= Scanning dependencies of target SmartsMatcher_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SmartsMatcher_test.dir/build.make test/CMakeFiles/SmartsMatcher_test.dir/build make[5]: Entering directory '/<>/build' [ 96%] Building CXX object test/CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmartsMatcher_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SmartsMatcher_test_autogen/mocs_compilation.cpp [ 96%] Building CXX object test/CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SmartsMatcher_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o -c /<>/test/SmartsMatcher_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SmartsMatcher_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SmartsMatcher_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SmartsMatcher_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SmartsMatcher_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/test/SmartsMatcher_test.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/test/SmartsMatcher_test.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 96%] Linking CXX executable ../bin/TEST/SmartsMatcher_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmartsMatcher_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test_autogen/mocs_compilation.cpp.o CMakeFiles/SmartsMatcher_test.dir/SmartsMatcher_test.C.o -o ../bin/TEST/SmartsMatcher_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 96%] Built target SmartsMatcher_test make -f test/CMakeFiles/BitVector_test1_autogen.dir/build.make test/CMakeFiles/BitVector_test1_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BitVector_test1_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BitVector_test1_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BitVector_test1_autogen.dir/build.make test/CMakeFiles/BitVector_test1_autogen.dir/build make[5]: Entering directory '/<>/build' [ 96%] Automatic MOC for target BitVector_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/BitVector_test1_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 96%] Built target BitVector_test1_autogen make -f test/CMakeFiles/BitVector_test1.dir/build.make test/CMakeFiles/BitVector_test1.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/BitVector_test1.dir/DependInfo.cmake --color= Scanning dependencies of target BitVector_test1 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/BitVector_test1.dir/build.make test/CMakeFiles/BitVector_test1.dir/build make[5]: Entering directory '/<>/build' [ 96%] Building CXX object test/CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BitVector_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o -c /<>/build/test/BitVector_test1_autogen/mocs_compilation.cpp [ 96%] Building CXX object test/CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/BitVector_test1_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o -c /<>/test/BitVector_test1.C [ 96%] Linking CXX executable ../bin/TEST/BitVector_test1 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/BitVector_test1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BitVector_test1.dir/BitVector_test1_autogen/mocs_compilation.cpp.o CMakeFiles/BitVector_test1.dir/BitVector_test1.C.o -o ../bin/TEST/BitVector_test1 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 96%] Built target BitVector_test1 make -f test/CMakeFiles/SDGenerator_test_autogen.dir/build.make test/CMakeFiles/SDGenerator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SDGenerator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SDGenerator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SDGenerator_test_autogen.dir/build.make test/CMakeFiles/SDGenerator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 97%] Automatic MOC for target SDGenerator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SDGenerator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 97%] Built target SDGenerator_test_autogen make -f test/CMakeFiles/SDGenerator_test.dir/build.make test/CMakeFiles/SDGenerator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SDGenerator_test.dir/DependInfo.cmake --color= Scanning dependencies of target SDGenerator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SDGenerator_test.dir/build.make test/CMakeFiles/SDGenerator_test.dir/build make[5]: Entering directory '/<>/build' [ 97%] Building CXX object test/CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SDGenerator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SDGenerator_test_autogen/mocs_compilation.cpp [ 97%] Building CXX object test/CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SDGenerator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o -c /<>/test/SDGenerator_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9, from /<>/test/SDGenerator_test.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../bin/TEST/SDGenerator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SDGenerator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SDGenerator_test.dir/SDGenerator_test_autogen/mocs_compilation.cpp.o CMakeFiles/SDGenerator_test.dir/SDGenerator_test.C.o -o ../bin/TEST/SDGenerator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 97%] Built target SDGenerator_test make -f test/CMakeFiles/SolventDescriptor_test_autogen.dir/build.make test/CMakeFiles/SolventDescriptor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SolventDescriptor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SolventDescriptor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SolventDescriptor_test_autogen.dir/build.make test/CMakeFiles/SolventDescriptor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 97%] Automatic MOC for target SolventDescriptor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SolventDescriptor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 97%] Built target SolventDescriptor_test_autogen make -f test/CMakeFiles/SolventDescriptor_test.dir/build.make test/CMakeFiles/SolventDescriptor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SolventDescriptor_test.dir/DependInfo.cmake --color= Scanning dependencies of target SolventDescriptor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SolventDescriptor_test.dir/build.make test/CMakeFiles/SolventDescriptor_test.dir/build make[5]: Entering directory '/<>/build' [ 97%] Building CXX object test/CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SolventDescriptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SolventDescriptor_test_autogen/mocs_compilation.cpp [ 97%] Building CXX object test/CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SolventDescriptor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o -c /<>/test/SolventDescriptor_test.C [ 98%] Linking CXX executable ../bin/TEST/SolventDescriptor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SolventDescriptor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test_autogen/mocs_compilation.cpp.o CMakeFiles/SolventDescriptor_test.dir/SolventDescriptor_test.C.o -o ../bin/TEST/SolventDescriptor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [ 98%] Built target SolventDescriptor_test make -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PairExpInteractionEnergyProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [ 98%] Automatic MOC for target PairExpInteractionEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [ 98%] Built target PairExpInteractionEnergyProcessor_test_autogen make -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target PairExpInteractionEnergyProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build.make test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/build make[5]: Entering directory '/<>/build' [ 98%] Building CXX object test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PairExpInteractionEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp [ 98%] Building CXX object test/CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/PairExpInteractionEnergyProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o -c /<>/test/PairExpInteractionEnergyProcessor_test.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:15, from /<>/test/PairExpInteractionEnergyProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable ../bin/TEST/PairExpInteractionEnergyProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/PairExpInteractionEnergyProcessor_test.dir/PairExpInteractionEnergyProcessor_test.C.o -o ../bin/TEST/PairExpInteractionEnergyProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target PairExpInteractionEnergyProcessor_test make -f test/CMakeFiles/Bit_test_autogen.dir/build.make test/CMakeFiles/Bit_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bit_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Bit_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bit_test_autogen.dir/build.make test/CMakeFiles/Bit_test_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target Bit_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Bit_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target Bit_test_autogen make -f test/CMakeFiles/Bit_test.dir/build.make test/CMakeFiles/Bit_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Bit_test.dir/DependInfo.cmake --color= Scanning dependencies of target Bit_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Bit_test.dir/build.make test/CMakeFiles/Bit_test.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bit_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/Bit_test_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/Bit_test.dir/Bit_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Bit_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Bit_test.dir/Bit_test.C.o -c /<>/test/Bit_test.C [100%] Linking CXX executable ../bin/TEST/Bit_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bit_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Bit_test.dir/Bit_test_autogen/mocs_compilation.cpp.o CMakeFiles/Bit_test.dir/Bit_test.C.o -o ../bin/TEST/Bit_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target Bit_test make -f test/CMakeFiles/RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/RDFIntegrator_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RDFIntegrator_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RDFIntegrator_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RDFIntegrator_test_autogen.dir/build.make test/CMakeFiles/RDFIntegrator_test_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target RDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/RDFIntegrator_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target RDFIntegrator_test_autogen make -f test/CMakeFiles/RDFIntegrator_test.dir/build.make test/CMakeFiles/RDFIntegrator_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/RDFIntegrator_test.dir/DependInfo.cmake --color= Scanning dependencies of target RDFIntegrator_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/RDFIntegrator_test.dir/build.make test/CMakeFiles/RDFIntegrator_test.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/RDFIntegrator_test_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/RDFIntegrator_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o -c /<>/test/RDFIntegrator_test.C [100%] Linking CXX executable ../bin/TEST/RDFIntegrator_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDFIntegrator_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test_autogen/mocs_compilation.cpp.o CMakeFiles/RDFIntegrator_test.dir/RDFIntegrator_test.C.o -o ../bin/TEST/RDFIntegrator_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target RDFIntegrator_test make -f test/CMakeFiles/SolventParameter_test_autogen.dir/build.make test/CMakeFiles/SolventParameter_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SolventParameter_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SolventParameter_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SolventParameter_test_autogen.dir/build.make test/CMakeFiles/SolventParameter_test_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target SolventParameter_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/SolventParameter_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target SolventParameter_test_autogen make -f test/CMakeFiles/SolventParameter_test.dir/build.make test/CMakeFiles/SolventParameter_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/SolventParameter_test.dir/DependInfo.cmake --color= Scanning dependencies of target SolventParameter_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/SolventParameter_test.dir/build.make test/CMakeFiles/SolventParameter_test.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SolventParameter_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/SolventParameter_test_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/SolventParameter_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o -c /<>/test/SolventParameter_test.C [100%] Linking CXX executable ../bin/TEST/SolventParameter_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/SolventParameter_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SolventParameter_test.dir/SolventParameter_test_autogen/mocs_compilation.cpp.o CMakeFiles/SolventParameter_test.dir/SolventParameter_test.C.o -o ../bin/TEST/SolventParameter_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target SolventParameter_test make -f test/CMakeFiles/Residue_test2_autogen.dir/build.make test/CMakeFiles/Residue_test2_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Residue_test2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Residue_test2_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Residue_test2_autogen.dir/build.make test/CMakeFiles/Residue_test2_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target Residue_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/Residue_test2_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target Residue_test2_autogen make -f test/CMakeFiles/Residue_test2.dir/build.make test/CMakeFiles/Residue_test2.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/Residue_test2.dir/DependInfo.cmake --color= Scanning dependencies of target Residue_test2 make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/Residue_test2.dir/build.make test/CMakeFiles/Residue_test2.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Residue_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o -c /<>/build/test/Residue_test2_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/Residue_test2.dir/Residue_test2.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/Residue_test2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/Residue_test2.dir/Residue_test2.C.o -c /<>/test/Residue_test2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/test/Residue_test2.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable ../bin/TEST/Residue_test2 cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/Residue_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Residue_test2.dir/Residue_test2_autogen/mocs_compilation.cpp.o CMakeFiles/Residue_test2.dir/Residue_test2.C.o -o ../bin/TEST/Residue_test2 -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target Residue_test2 make -f test/CMakeFiles/ClaverieParameter_test_autogen.dir/build.make test/CMakeFiles/ClaverieParameter_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClaverieParameter_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ClaverieParameter_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClaverieParameter_test_autogen.dir/build.make test/CMakeFiles/ClaverieParameter_test_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target ClaverieParameter_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/ClaverieParameter_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target ClaverieParameter_test_autogen make -f test/CMakeFiles/ClaverieParameter_test.dir/build.make test/CMakeFiles/ClaverieParameter_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/ClaverieParameter_test.dir/DependInfo.cmake --color= Scanning dependencies of target ClaverieParameter_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/ClaverieParameter_test.dir/build.make test/CMakeFiles/ClaverieParameter_test.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClaverieParameter_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/ClaverieParameter_test_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/ClaverieParameter_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test.C.o -c /<>/test/ClaverieParameter_test.C [100%] Linking CXX executable ../bin/TEST/ClaverieParameter_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClaverieParameter_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test_autogen/mocs_compilation.cpp.o CMakeFiles/ClaverieParameter_test.dir/ClaverieParameter_test.C.o -o ../bin/TEST/ClaverieParameter_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target ClaverieParameter_test make -f test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CreateSpectrumProcessor_test_autogen make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/build make[5]: Entering directory '/<>/build' [100%] Automatic MOC for target CreateSpectrumProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_autogen /<>/build/test/CMakeFiles/CreateSpectrumProcessor_test_autogen.dir/AutogenInfo.json Release make[5]: Leaving directory '/<>/build' [100%] Built target CreateSpectrumProcessor_test_autogen make -f test/CMakeFiles/CreateSpectrumProcessor_test.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/CreateSpectrumProcessor_test.dir/DependInfo.cmake --color= Scanning dependencies of target CreateSpectrumProcessor_test make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/CreateSpectrumProcessor_test.dir/build.make test/CMakeFiles/CreateSpectrumProcessor_test.dir/build make[5]: Entering directory '/<>/build' [100%] Building CXX object test/CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CreateSpectrumProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o -c /<>/build/test/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp [100%] Building CXX object test/CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o cd /<>/build/test && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/test/CreateSpectrumProcessor_test_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/test -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -fPIC -o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o -c /<>/test/CreateSpectrumProcessor_test.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11, from /<>/test/CreateSpectrumProcessor_test.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable ../bin/TEST/CreateSpectrumProcessor_test cd /<>/build/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/CreateSpectrumProcessor_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O0 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test_autogen/mocs_compilation.cpp.o CMakeFiles/CreateSpectrumProcessor_test.dir/CreateSpectrumProcessor_test.C.o -o ../bin/TEST/CreateSpectrumProcessor_test -Wl,-rpath,/<>/build/lib ../lib/libBALL.so.1.5 -lpthread -lGLEW /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[5]: Leaving directory '/<>/build' [100%] Built target CreateSpectrumProcessor_test make -f test/CMakeFiles/build_tests.dir/build.make test/CMakeFiles/build_tests.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/build /<>/build/test /<>/build/test/CMakeFiles/build_tests.dir/DependInfo.cmake --color= Scanning dependencies of target build_tests make[5]: Leaving directory '/<>/build' make -f test/CMakeFiles/build_tests.dir/build.make test/CMakeFiles/build_tests.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'test/CMakeFiles/build_tests.dir/build'. make[5]: Leaving directory '/<>/build' [100%] Built target build_tests make[4]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[3]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles /<>/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[4]: Entering directory '/<>/build' [ 0%] Automatic MOC for target BALL /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 2%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[4]: Entering directory '/<>/build' make[4]: Nothing to be done for 'CMakeFiles/BALL.dir/build'. make[4]: Leaving directory '/<>/build' [ 46%] Built target BALL make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build make[4]: Entering directory '/<>/build' [ 46%] Automatic MOC for target VIEW /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 53%] Built target VIEW_autogen make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build make[4]: Entering directory '/<>/build' make[4]: Nothing to be done for 'CMakeFiles/VIEW.dir/build'. make[4]: Leaving directory '/<>/build' [ 73%] Built target VIEW make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LigCheck_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target LigCheck cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target LigCheck_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/DependInfo.cmake --color= Scanning dependencies of target LigCheck make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigCheck.dir/LigCheck.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/LigCheck_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigCheck.dir/LigCheck.C.o -c /<>/source/APPLICATIONS/TOOLS/LigCheck.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigCheck.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/LigCheck.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/LigCheck.C:245:43: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 245 | catch(BALL::Exception::GeneralException e) | ^ [ 73%] Linking CXX executable ../../../bin/TOOLS/LigCheck cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/LigCheck.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LigCheck.dir/LigCheck_autogen/mocs_compilation.cpp.o CMakeFiles/LigCheck.dir/LigCheck.C.o -o ../../../bin/TOOLS/LigCheck -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target LigCheck make -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FeatureSelector_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target FeatureSelector cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target FeatureSelector_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/DependInfo.cmake --color= Scanning dependencies of target FeatureSelector make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FeatureSelector_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o -c /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C: In function ‘void startFeatureSelection(BALL::QSAR::FeatureSelectionConfiguration&, BALL::QSAR::QSARData*, BALL::String*)’: /<>/source/APPLICATIONS/TOOLS/FeatureSelector.C:122:43: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 122 | catch(BALL::Exception::GeneralException e) | ^ [ 73%] Linking CXX executable ../../../bin/TOOLS/FeatureSelector cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureSelector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FeatureSelector.dir/FeatureSelector_autogen/mocs_compilation.cpp.o CMakeFiles/FeatureSelector.dir/FeatureSelector.C.o -o ../../../bin/TOOLS/FeatureSelector -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target FeatureSelector make -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target InteractionConstraintDefiner_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target InteractionConstraintDefiner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target InteractionConstraintDefiner_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/DependInfo.cmake --color= Scanning dependencies of target InteractionConstraintDefiner make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o -c /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InteractionConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable ../../../bin/TOOLS/InteractionConstraintDefiner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InteractionConstraintDefiner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner_autogen/mocs_compilation.cpp.o CMakeFiles/InteractionConstraintDefiner.dir/InteractionConstraintDefiner.C.o -o ../../../bin/TOOLS/InteractionConstraintDefiner -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target InteractionConstraintDefiner make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target InputPartitioner_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target InputPartitioner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target InputPartitioner_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/DependInfo.cmake --color= Scanning dependencies of target InputPartitioner make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InputPartitioner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o -c /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputPartitioner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable ../../../bin/TOOLS/InputPartitioner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InputPartitioner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InputPartitioner.dir/InputPartitioner_autogen/mocs_compilation.cpp.o CMakeFiles/InputPartitioner.dir/InputPartitioner.C.o -o ../../../bin/TOOLS/InputPartitioner -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target InputPartitioner make -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target IMGDock_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target IMGDock cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target IMGDock_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/DependInfo.cmake --color= Scanning dependencies of target IMGDock make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/IMGDock.dir/IMGDock.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/IMGDock_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/IMGDock.dir/IMGDock.C.o -c /<>/source/APPLICATIONS/TOOLS/IMGDock.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/IMGDock.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 73%] Linking CXX executable ../../../bin/TOOLS/IMGDock cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/IMGDock.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/IMGDock.dir/IMGDock_autogen/mocs_compilation.cpp.o CMakeFiles/IMGDock.dir/IMGDock.C.o -o ../../../bin/TOOLS/IMGDock -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target IMGDock make -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ModelCreator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target ModelCreator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target ModelCreator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/DependInfo.cmake --color= Scanning dependencies of target ModelCreator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ModelCreator.dir/ModelCreator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ModelCreator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ModelCreator.dir/ModelCreator.C.o -c /<>/source/APPLICATIONS/TOOLS/ModelCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ModelCreator.C: In function ‘void startModelCreation(BALL::QSAR::ModelConfiguration&, BALL::QSAR::QSARData*, BALL::String*)’: /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:101:43: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 101 | catch(BALL::Exception::GeneralException e) | ^ /<>/source/APPLICATIONS/TOOLS/ModelCreator.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/ModelCreator.C:156:42: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 156 | catch(BALL::Exception::GeneralException e) | ^ [ 73%] Linking CXX executable ../../../bin/TOOLS/ModelCreator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ModelCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ModelCreator.dir/ModelCreator_autogen/mocs_compilation.cpp.o CMakeFiles/ModelCreator.dir/ModelCreator.C.o -o ../../../bin/TOOLS/ModelCreator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 73%] Built target ModelCreator make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractProteinSequence_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/build make[4]: Entering directory '/<>/build' [ 73%] Automatic MOC for target ExtractProteinSequence cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 73%] Built target ExtractProteinSequence_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractProteinSequence make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/build make[4]: Entering directory '/<>/build' [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/mocs_compilation.cpp [ 73%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractProteinSequence_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o -c /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinSequence.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX executable ../../../bin/TOOLS/ExtractProteinSequence cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractProteinSequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractProteinSequence.dir/ExtractProteinSequence.C.o -o ../../../bin/TOOLS/ExtractProteinSequence -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 75%] Built target ExtractProteinSequence make -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target EvenSplit_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/build make[4]: Entering directory '/<>/build' [ 75%] Automatic MOC for target EvenSplit cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 75%] Built target EvenSplit_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/DependInfo.cmake --color= Scanning dependencies of target EvenSplit make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/build make[4]: Entering directory '/<>/build' [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/mocs_compilation.cpp [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/EvenSplit.dir/EvenSplit.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/EvenSplit_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/EvenSplit.dir/EvenSplit.C.o -c /<>/source/APPLICATIONS/TOOLS/EvenSplit.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/EvenSplit.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX executable ../../../bin/TOOLS/EvenSplit cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/EvenSplit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/EvenSplit.dir/EvenSplit_autogen/mocs_compilation.cpp.o CMakeFiles/EvenSplit.dir/EvenSplit.C.o -o ../../../bin/TOOLS/EvenSplit -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 75%] Built target EvenSplit make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractProteinChains_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/build make[4]: Entering directory '/<>/build' [ 75%] Automatic MOC for target ExtractProteinChains cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 75%] Built target ExtractProteinChains_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractProteinChains make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/build make[4]: Entering directory '/<>/build' [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/mocs_compilation.cpp [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractProteinChains_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o -c /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractProteinChains.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX executable ../../../bin/TOOLS/ExtractProteinChains cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractProteinChains.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractProteinChains.dir/ExtractProteinChains.C.o -o ../../../bin/TOOLS/ExtractProteinChains -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 75%] Built target ExtractProteinChains make -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ResidueChecker_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/build make[4]: Entering directory '/<>/build' [ 75%] Automatic MOC for target ResidueChecker cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 75%] Built target ResidueChecker_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/DependInfo.cmake --color= Scanning dependencies of target ResidueChecker make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/build make[4]: Entering directory '/<>/build' [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/mocs_compilation.cpp [ 75%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ResidueChecker_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o -c /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ResidueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX executable ../../../bin/TOOLS/ResidueChecker cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResidueChecker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ResidueChecker.dir/ResidueChecker_autogen/mocs_compilation.cpp.o CMakeFiles/ResidueChecker.dir/ResidueChecker.C.o -o ../../../bin/TOOLS/ResidueChecker -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 75%] Built target ResidueChecker make -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RMSDCalculator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target RMSDCalculator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target RMSDCalculator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/DependInfo.cmake --color= Scanning dependencies of target RMSDCalculator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/mocs_compilation.cpp [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/RMSDCalculator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o -c /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RMSDCalculator.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../../../bin/TOOLS/RMSDCalculator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/RMSDCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RMSDCalculator.dir/RMSDCalculator_autogen/mocs_compilation.cpp.o CMakeFiles/RMSDCalculator.dir/RMSDCalculator.C.o -o ../../../bin/TOOLS/RMSDCalculator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 77%] Built target RMSDCalculator make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractClustersFromWardTree_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target ExtractClustersFromWardTree cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target ExtractClustersFromWardTree_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/DependInfo.cmake --color= Scanning dependencies of target ExtractClustersFromWardTree make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o -c /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/ExtractClustersFromWardTree.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../../../bin/TOOLS/ExtractClustersFromWardTree cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExtractClustersFromWardTree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree_autogen/mocs_compilation.cpp.o CMakeFiles/ExtractClustersFromWardTree.dir/ExtractClustersFromWardTree.C.o -o ../../../bin/TOOLS/ExtractClustersFromWardTree -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 77%] Built target ExtractClustersFromWardTree make -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Validator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target Validator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target Validator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/DependInfo.cmake --color= Scanning dependencies of target Validator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Validator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/Validator_autogen/mocs_compilation.cpp [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Validator.dir/Validator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Validator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Validator.dir/Validator.C.o -c /<>/source/APPLICATIONS/TOOLS/Validator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Validator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Validator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Validator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Validator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Validator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Validator.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../../../bin/TOOLS/Validator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Validator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Validator.dir/Validator_autogen/mocs_compilation.cpp.o CMakeFiles/Validator.dir/Validator.C.o -o ../../../bin/TOOLS/Validator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 77%] Built target Validator make -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PoseIndices2PDB_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target PoseIndices2PDB cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target PoseIndices2PDB_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/DependInfo.cmake --color= Scanning dependencies of target PoseIndices2PDB make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/mocs_compilation.cpp [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PoseIndices2PDB_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o -c /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/PoseIndices2PDB.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../../../bin/TOOLS/PoseIndices2PDB cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PoseIndices2PDB.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB_autogen/mocs_compilation.cpp.o CMakeFiles/PoseIndices2PDB.dir/PoseIndices2PDB.C.o -o ../../../bin/TOOLS/PoseIndices2PDB -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 77%] Built target PoseIndices2PDB make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DockResultMerger_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target DockResultMerger cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target DockResultMerger_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DependInfo.cmake --color= Scanning dependencies of target DockResultMerger make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/mocs_compilation.cpp [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/DockResultMerger_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o -c /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/APPLICATIONS/TOOLS/DockResultMerger.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 77%] Linking CXX executable ../../../bin/TOOLS/DockResultMerger cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockResultMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockResultMerger.dir/DockResultMerger_autogen/mocs_compilation.cpp.o CMakeFiles/DockResultMerger.dir/DockResultMerger.C.o -o ../../../bin/TOOLS/DockResultMerger -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 77%] Built target DockResultMerger make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target LigandFileSplitter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 77%] Automatic MOC for target LigandFileSplitter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 77%] Built target LigandFileSplitter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/DependInfo.cmake --color= Scanning dependencies of target LigandFileSplitter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/build make[4]: Entering directory '/<>/build' [ 77%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/LigandFileSplitter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o -c /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/LigandFileSplitter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/LigandFileSplitter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/LigandFileSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter_autogen/mocs_compilation.cpp.o CMakeFiles/LigandFileSplitter.dir/LigandFileSplitter.C.o -o ../../../bin/TOOLS/LigandFileSplitter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target LigandFileSplitter make -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AddMissingAtoms_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target AddMissingAtoms cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target AddMissingAtoms_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/DependInfo.cmake --color= Scanning dependencies of target AddMissingAtoms make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AddMissingAtoms_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o -c /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AddMissingAtoms.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/AddMissingAtoms cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AddMissingAtoms.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms_autogen/mocs_compilation.cpp.o CMakeFiles/AddMissingAtoms.dir/AddMissingAtoms.C.o -o ../../../bin/TOOLS/AddMissingAtoms -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target AddMissingAtoms make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FingerprintSimilarityClustering_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target FingerprintSimilarityClustering cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target FingerprintSimilarityClustering_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/DependInfo.cmake --color= Scanning dependencies of target FingerprintSimilarityClustering make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o -c /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilarityClustering.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/FingerprintSimilarityClustering cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FingerprintSimilarityClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering_autogen/mocs_compilation.cpp.o CMakeFiles/FingerprintSimilarityClustering.dir/FingerprintSimilarityClustering.C.o -o ../../../bin/TOOLS/FingerprintSimilarityClustering -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target FingerprintSimilarityClustering make -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AntitargetRescorer_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target AntitargetRescorer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target AntitargetRescorer_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/DependInfo.cmake --color= Scanning dependencies of target AntitargetRescorer make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AntitargetRescorer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o -c /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/AntitargetRescorer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/AntitargetRescorer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AntitargetRescorer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer_autogen/mocs_compilation.cpp.o CMakeFiles/AntitargetRescorer.dir/AntitargetRescorer.C.o -o ../../../bin/TOOLS/AntitargetRescorer -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target AntitargetRescorer make -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargesCopy_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target PartialChargesCopy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target PartialChargesCopy_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/DependInfo.cmake --color= Scanning dependencies of target PartialChargesCopy make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PartialChargesCopy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o -c /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PartialChargesCopy.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/PartialChargesCopy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialChargesCopy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy_autogen/mocs_compilation.cpp.o CMakeFiles/PartialChargesCopy.dir/PartialChargesCopy.C.o -o ../../../bin/TOOLS/PartialChargesCopy -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target PartialChargesCopy make -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target AutoModel_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target AutoModel cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target AutoModel_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/DependInfo.cmake --color= Scanning dependencies of target AutoModel make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/AutoModel.dir/AutoModel.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/AutoModel_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/AutoModel.dir/AutoModel.C.o -c /<>/source/APPLICATIONS/TOOLS/AutoModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/AutoModel.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/AutoModel cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutoModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/AutoModel.dir/AutoModel_autogen/mocs_compilation.cpp.o CMakeFiles/AutoModel.dir/AutoModel.C.o -o ../../../bin/TOOLS/AutoModel -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target AutoModel make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateBindingFreeEnergy_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target CalculateBindingFreeEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateBindingFreeEnergy_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateBindingFreeEnergy make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o -c /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateBindingFreeEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/CalculateBindingFreeEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateBindingFreeEnergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateBindingFreeEnergy.dir/CalculateBindingFreeEnergy.C.o -o ../../../bin/TOOLS/CalculateBindingFreeEnergy -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateBindingFreeEnergy make -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target RemoveWater_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target RemoveWater cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target RemoveWater_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/DependInfo.cmake --color= Scanning dependencies of target RemoveWater make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/RemoveWater.dir/RemoveWater.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/RemoveWater_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/RemoveWater.dir/RemoveWater.C.o -c /<>/source/APPLICATIONS/TOOLS/RemoveWater.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/RemoveWater.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/RemoveWater cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/RemoveWater.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RemoveWater.dir/RemoveWater_autogen/mocs_compilation.cpp.o CMakeFiles/RemoveWater.dir/RemoveWater.C.o -o ../../../bin/TOOLS/RemoveWater -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target RemoveWater make -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ProteinCheck_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target ProteinCheck cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target ProteinCheck_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/DependInfo.cmake --color= Scanning dependencies of target ProteinCheck make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ProteinCheck_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o -c /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C: In function ‘bool checkProtein(BALL::Protein*, bool)’: /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:275:44: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 275 | catch(BALL::Exception::GeneralException e) {} | ^ /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C: In function ‘void generateReport(BALL::Protein&, BALL::String, BALL::String)’: /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:511:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 511 | system(command.c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:529:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 529 | system(command.c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:793:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 793 | system(command.c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ProteinCheck.C:797:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 797 | system(command.c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/ProteinCheck cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinCheck.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ProteinCheck.dir/ProteinCheck_autogen/mocs_compilation.cpp.o CMakeFiles/ProteinCheck.dir/ProteinCheck.C.o -o ../../../bin/TOOLS/ProteinCheck -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target ProteinCheck make -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BondOrderAssigner_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target BondOrderAssigner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target BondOrderAssigner_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/DependInfo.cmake --color= Scanning dependencies of target BondOrderAssigner make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/BondOrderAssigner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o -c /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/assignBondOrderProcessor.h:13, from /<>/source/APPLICATIONS/TOOLS/BondOrderAssigner.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/BondOrderAssigner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/BondOrderAssigner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner_autogen/mocs_compilation.cpp.o CMakeFiles/BondOrderAssigner.dir/BondOrderAssigner.C.o -o ../../../bin/TOOLS/BondOrderAssigner -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target BondOrderAssigner make -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Converter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target Converter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target Converter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/DependInfo.cmake --color= Scanning dependencies of target Converter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Converter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/Converter_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Converter.dir/Converter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Converter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Converter.dir/Converter.C.o -c /<>/source/APPLICATIONS/TOOLS/Converter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/Converter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/Converter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Converter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Converter.dir/Converter_autogen/mocs_compilation.cpp.o CMakeFiles/Converter.dir/Converter.C.o -o ../../../bin/TOOLS/Converter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target Converter make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateSolvationFreeEnergy_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target CalculateSolvationFreeEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateSolvationFreeEnergy_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateSolvationFreeEnergy make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o -c /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/CalculateSolvationFreeEnergy.C:64:8: warning: unused variable ‘total_energy’ [-Wunused-variable] 64 | float total_energy = FF.updateEnergy(); | ^~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/CalculateSolvationFreeEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateSolvationFreeEnergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateSolvationFreeEnergy.dir/CalculateSolvationFreeEnergy.C.o -o ../../../bin/TOOLS/CalculateSolvationFreeEnergy -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateSolvationFreeEnergy make -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SeparateMolecules_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target SeparateMolecules cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target SeparateMolecules_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/DependInfo.cmake --color= Scanning dependencies of target SeparateMolecules make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SeparateMolecules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o -c /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13, from /<>/source/APPLICATIONS/TOOLS/SeparateMolecules.C:25: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/SeparateMolecules cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeparateMolecules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SeparateMolecules.dir/SeparateMolecules_autogen/mocs_compilation.cpp.o CMakeFiles/SeparateMolecules.dir/SeparateMolecules.C.o -o ../../../bin/TOOLS/SeparateMolecules -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target SeparateMolecules make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateEnergy_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target CalculateEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateEnergy_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/DependInfo.cmake --color= Scanning dependencies of target CalculateEnergy make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CalculateEnergy_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o -c /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/AMBER/amber.h:10, from /<>/source/APPLICATIONS/TOOLS/CalculateEnergy.C:4: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/CalculateEnergy cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CalculateEnergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CalculateEnergy.dir/CalculateEnergy_autogen/mocs_compilation.cpp.o CMakeFiles/CalculateEnergy.dir/CalculateEnergy.C.o -o ../../../bin/TOOLS/CalculateEnergy -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target CalculateEnergy make -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CombiLibGenerator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target CombiLibGenerator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target CombiLibGenerator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/DependInfo.cmake --color= Scanning dependencies of target CombiLibGenerator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CombiLibGenerator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o -c /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13, from /<>/include/BALL/STRUCTURE/rGroupAssembler.h:12, from /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C: In function ‘void readFile(BALL::String)’: /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:104:5: warning: this statement may fall through [-Wimplicit-fallthrough=] 104 | } | ^ /<>/source/APPLICATIONS/TOOLS/CombiLibGenerator.C:105:4: note: here 105 | default: | ^~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/CombiLibGenerator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CombiLibGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator_autogen/mocs_compilation.cpp.o CMakeFiles/CombiLibGenerator.dir/CombiLibGenerator.C.o -o ../../../bin/TOOLS/CombiLibGenerator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target CombiLibGenerator make -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target BindingDBCleaner_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target BindingDBCleaner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target BindingDBCleaner_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/DependInfo.cmake --color= Scanning dependencies of target BindingDBCleaner make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/BindingDBCleaner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o -c /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/BindingDBCleaner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/BindingDBCleaner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/BindingDBCleaner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner_autogen/mocs_compilation.cpp.o CMakeFiles/BindingDBCleaner.dir/BindingDBCleaner.C.o -o ../../../bin/TOOLS/BindingDBCleaner -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target BindingDBCleaner make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MolPredictor_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target MolPredictor cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target MolPredictor_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/DependInfo.cmake --color= Scanning dependencies of target MolPredictor make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/mocs_compilation.cpp [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolPredictor.dir/MolPredictor.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolPredictor_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolPredictor.dir/MolPredictor.C.o -c /<>/source/APPLICATIONS/TOOLS/MolPredictor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolPredictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 80%] Linking CXX executable ../../../bin/TOOLS/MolPredictor cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolPredictor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolPredictor.dir/MolPredictor_autogen/mocs_compilation.cpp.o CMakeFiles/MolPredictor.dir/MolPredictor.C.o -o ../../../bin/TOOLS/MolPredictor -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 80%] Built target MolPredictor make -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Trajectory2RigidTransformation_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/build make[4]: Entering directory '/<>/build' [ 80%] Automatic MOC for target Trajectory2RigidTransformation cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 80%] Built target Trajectory2RigidTransformation_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/DependInfo.cmake --color= Scanning dependencies of target Trajectory2RigidTransformation make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/build make[4]: Entering directory '/<>/build' [ 80%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp [ 82%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o -c /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/Trajectory2RigidTransformation.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../../../bin/TOOLS/Trajectory2RigidTransformation cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory2RigidTransformation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation_autogen/mocs_compilation.cpp.o CMakeFiles/Trajectory2RigidTransformation.dir/Trajectory2RigidTransformation.C.o -o ../../../bin/TOOLS/Trajectory2RigidTransformation -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 82%] Built target Trajectory2RigidTransformation make -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target CrystalGenerator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 82%] Automatic MOC for target CrystalGenerator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 82%] Built target CrystalGenerator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/DependInfo.cmake --color= Scanning dependencies of target CrystalGenerator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/build make[4]: Entering directory '/<>/build' [ 82%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/mocs_compilation.cpp [ 82%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/CrystalGenerator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o -c /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/APPLICATIONS/TOOLS/CrystalGenerator.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX executable ../../../bin/TOOLS/CrystalGenerator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/CrystalGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CrystalGenerator.dir/CrystalGenerator_autogen/mocs_compilation.cpp.o CMakeFiles/CrystalGenerator.dir/CrystalGenerator.C.o -o ../../../bin/TOOLS/CrystalGenerator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 82%] Built target CrystalGenerator make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target DockPoseClustering_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/build make[4]: Entering directory '/<>/build' [ 82%] Automatic MOC for target DockPoseClustering cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 82%] Built target DockPoseClustering_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DependInfo.cmake --color= Scanning dependencies of target DockPoseClustering make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/build make[4]: Entering directory '/<>/build' [ 82%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/mocs_compilation.cpp [ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/DockPoseClustering_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o -c /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/DockPoseClustering.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../../../bin/TOOLS/DockPoseClustering cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/DockPoseClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/DockPoseClustering.dir/DockPoseClustering_autogen/mocs_compilation.cpp.o CMakeFiles/DockPoseClustering.dir/DockPoseClustering.C.o -o ../../../bin/TOOLS/DockPoseClustering -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 84%] Built target DockPoseClustering make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MolFilter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 84%] Automatic MOC for target MolFilter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 84%] Built target MolFilter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/DependInfo.cmake --color= Scanning dependencies of target MolFilter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/build make[4]: Entering directory '/<>/build' [ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/mocs_compilation.cpp [ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolFilter.dir/MolFilter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolFilter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolFilter.dir/MolFilter.C.o -c /<>/source/APPLICATIONS/TOOLS/MolFilter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolFilter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/MolFilter.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/MolFilter.C:44:9: warning: variable ‘min_logP’ set but not used [-Wunused-but-set-variable] 44 | double min_logP = 0; | ^~~~~~~~ /<>/source/APPLICATIONS/TOOLS/MolFilter.C:45:9: warning: variable ‘max_logP’ set but not used [-Wunused-but-set-variable] 45 | double max_logP = 20; | ^~~~~~~~ [ 84%] Linking CXX executable ../../../bin/TOOLS/MolFilter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolFilter.dir/MolFilter_autogen/mocs_compilation.cpp.o CMakeFiles/MolFilter.dir/MolFilter.C.o -o ../../../bin/TOOLS/MolFilter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 84%] Built target MolFilter make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target InputReader_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/build make[4]: Entering directory '/<>/build' [ 84%] Automatic MOC for target InputReader cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputReader_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 84%] Built target InputReader_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/DependInfo.cmake --color= Scanning dependencies of target InputReader make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/build make[4]: Entering directory '/<>/build' [ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/InputReader_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InputReader_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputReader.dir/InputReader_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/InputReader_autogen/mocs_compilation.cpp [ 84%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/InputReader.dir/InputReader.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/InputReader_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/InputReader.dir/InputReader.C.o -c /<>/source/APPLICATIONS/TOOLS/InputReader.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/InputReader.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../../../bin/TOOLS/InputReader cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/InputReader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/InputReader.dir/InputReader_autogen/mocs_compilation.cpp.o CMakeFiles/InputReader.dir/InputReader.C.o -o ../../../bin/TOOLS/InputReader -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 84%] Built target InputReader make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBCutter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 84%] Automatic MOC for target PDBCutter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 84%] Built target PDBCutter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/DependInfo.cmake --color= Scanning dependencies of target PDBCutter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/build make[4]: Entering directory '/<>/build' [ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/mocs_compilation.cpp [ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBCutter.dir/PDBCutter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBCutter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBCutter.dir/PDBCutter.C.o -c /<>/source/APPLICATIONS/TOOLS/PDBCutter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBCutter.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX executable ../../../bin/TOOLS/PDBCutter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBCutter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBCutter.dir/PDBCutter_autogen/mocs_compilation.cpp.o CMakeFiles/PDBCutter.dir/PDBCutter.C.o -o ../../../bin/TOOLS/PDBCutter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 86%] Built target PDBCutter make -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target Predictor_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/build make[4]: Entering directory '/<>/build' [ 86%] Automatic MOC for target Predictor cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 86%] Built target Predictor_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/DependInfo.cmake --color= Scanning dependencies of target Predictor make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/build make[4]: Entering directory '/<>/build' [ 86%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Predictor_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/Predictor_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/Predictor.dir/Predictor.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/Predictor_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/Predictor.dir/Predictor.C.o -c /<>/source/APPLICATIONS/TOOLS/Predictor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/Predictor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/Predictor cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/Predictor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Predictor.dir/Predictor_autogen/mocs_compilation.cpp.o CMakeFiles/Predictor.dir/Predictor.C.o -o ../../../bin/TOOLS/Predictor -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target Predictor make -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SLICK_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SLICK cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target SLICK_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/DependInfo.cmake --color= Scanning dependencies of target SLICK make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SLICK_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SLICK_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SLICK.dir/SLICK.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SLICK_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SLICK.dir/SLICK.C.o -c /<>/source/APPLICATIONS/TOOLS/SLICK.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/SLICK.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/SLICK.C:216:29: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 216 | for (it = system.beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/SLICK.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/SLICK.C:216:29: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 216 | for (it = system.beginAtom(); +it; ++it) | ^ /<>/source/APPLICATIONS/TOOLS/SLICK.C:237:32: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 237 | for (it = protein->beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/SLICK.C:249:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 249 | for (it = ligand->beginAtom(); +it; ++it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/APPLICATIONS/TOOLS/SLICK.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/SLICK cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLICK.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SLICK.dir/SLICK_autogen/mocs_compilation.cpp.o CMakeFiles/SLICK.dir/SLICK.C.o -o ../../../bin/TOOLS/SLICK -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target SLICK make -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialConstraintDefiner_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SpatialConstraintDefiner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target SpatialConstraintDefiner_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialConstraintDefiner make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o -c /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SpatialConstraintDefiner.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/SpatialConstraintDefiner cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialConstraintDefiner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner_autogen/mocs_compilation.cpp.o CMakeFiles/SpatialConstraintDefiner.dir/SpatialConstraintDefiner.C.o -o ../../../bin/TOOLS/SpatialConstraintDefiner -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target SpatialConstraintDefiner make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBDownload_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PDBDownload cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PDBDownload_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/DependInfo.cmake --color= Scanning dependencies of target PDBDownload make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBDownload.dir/PDBDownload.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBDownload_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBDownload.dir/PDBDownload.C.o -c /<>/source/APPLICATIONS/TOOLS/PDBDownload.C [ 88%] Linking CXX executable ../../../bin/TOOLS/PDBDownload cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBDownload.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBDownload.dir/PDBDownload_autogen/mocs_compilation.cpp.o CMakeFiles/PDBDownload.dir/PDBDownload.C.o -o ../../../bin/TOOLS/PDBDownload -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PDBDownload make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PDBRMSDCalculator_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PDBRMSDCalculator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PDBRMSDCalculator_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/DependInfo.cmake --color= Scanning dependencies of target PDBRMSDCalculator make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PDBRMSDCalculator_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o -c /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9, from /<>/source/APPLICATIONS/TOOLS/PDBRMSDCalculator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/PDBRMSDCalculator cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PDBRMSDCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator_autogen/mocs_compilation.cpp.o CMakeFiles/PDBRMSDCalculator.dir/PDBRMSDCalculator.C.o -o ../../../bin/TOOLS/PDBRMSDCalculator -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PDBRMSDCalculator make -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PocketDetector_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PocketDetector cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PocketDetector_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/DependInfo.cmake --color= Scanning dependencies of target PocketDetector make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PocketDetector.dir/PocketDetector.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PocketDetector_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PocketDetector.dir/PocketDetector.C.o -c /<>/source/APPLICATIONS/TOOLS/PocketDetector.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/APPLICATIONS/TOOLS/PocketDetector.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/PocketDetector cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PocketDetector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PocketDetector.dir/PocketDetector_autogen/mocs_compilation.cpp.o CMakeFiles/PocketDetector.dir/PocketDetector.C.o -o ../../../bin/TOOLS/PocketDetector -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PocketDetector make -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideBuilder_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PeptideBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PeptideBuilder_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/DependInfo.cmake --color= Scanning dependencies of target PeptideBuilder make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PeptideBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o -c /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/PeptideBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/PeptideBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideBuilder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PeptideBuilder.dir/PeptideBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/PeptideBuilder.dir/PeptideBuilder.C.o -o ../../../bin/TOOLS/PeptideBuilder -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PeptideBuilder make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyModifier_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PropertyModifier cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PropertyModifier_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyModifier make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PropertyModifier_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o -c /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyModifier.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/PropertyModifier cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyModifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyModifier.dir/PropertyModifier_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyModifier.dir/PropertyModifier.C.o -o ../../../bin/TOOLS/PropertyModifier -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PropertyModifier make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target MolCombine_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target MolCombine cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target MolCombine_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/DependInfo.cmake --color= Scanning dependencies of target MolCombine make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/MolCombine.dir/MolCombine.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/MolCombine_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/MolCombine.dir/MolCombine.C.o -c /<>/source/APPLICATIONS/TOOLS/MolCombine.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/MolCombine.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/MolCombine cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCombine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/MolCombine.dir/MolCombine_autogen/mocs_compilation.cpp.o CMakeFiles/MolCombine.dir/MolCombine.C.o -o ../../../bin/TOOLS/MolCombine -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target MolCombine make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyPlotter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target PropertyPlotter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target PropertyPlotter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/DependInfo.cmake --color= Scanning dependencies of target PropertyPlotter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/PropertyPlotter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o -c /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/PropertyPlotter.C:176:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 176 | system(c.c_str()); | ~~~~~~^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/PropertyPlotter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyPlotter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/PropertyPlotter.dir/PropertyPlotter_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyPlotter.dir/PropertyPlotter.C.o -o ../../../bin/TOOLS/PropertyPlotter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target PropertyPlotter make -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ConstraintsFinder_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target ConstraintsFinder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target ConstraintsFinder_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/DependInfo.cmake --color= Scanning dependencies of target ConstraintsFinder make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ConstraintsFinder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o -c /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/ConstraintsFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/ConstraintsFinder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConstraintsFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder_autogen/mocs_compilation.cpp.o CMakeFiles/ConstraintsFinder.dir/ConstraintsFinder.C.o -o ../../../bin/TOOLS/ConstraintsFinder -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target ConstraintsFinder make -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target ScoreAnalyzer_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target ScoreAnalyzer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target ScoreAnalyzer_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/DependInfo.cmake --color= Scanning dependencies of target ScoreAnalyzer make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/ScoreAnalyzer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o -c /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/ScoreAnalyzer.C:610:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 610 | system("gnuplot -persist plot.txt"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/ScoreAnalyzer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScoreAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer_autogen/mocs_compilation.cpp.o CMakeFiles/ScoreAnalyzer.dir/ScoreAnalyzer.C.o -o ../../../bin/TOOLS/ScoreAnalyzer -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target ScoreAnalyzer make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TaGRes-train_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target TaGRes-train cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target TaGRes-train_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/DependInfo.cmake --color= Scanning dependencies of target TaGRes-train make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TaGRes-train_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o -c /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes-train.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/TaGRes-train cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TaGRes-train.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TaGRes-train.dir/TaGRes-train_autogen/mocs_compilation.cpp.o CMakeFiles/TaGRes-train.dir/TaGRes-train.C.o -o ../../../bin/TOOLS/TaGRes-train -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target TaGRes-train make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target FingerprintSimilaritySearch_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target FingerprintSimilaritySearch cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target FingerprintSimilaritySearch_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/DependInfo.cmake --color= Scanning dependencies of target FingerprintSimilaritySearch make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o -c /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/FingerprintSimilaritySearch.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/FingerprintSimilaritySearch cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FingerprintSimilaritySearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch_autogen/mocs_compilation.cpp.o CMakeFiles/FingerprintSimilaritySearch.dir/FingerprintSimilaritySearch.C.o -o ../../../bin/TOOLS/FingerprintSimilaritySearch -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target FingerprintSimilaritySearch make -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SideChainGridBuilder_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SideChainGridBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target SideChainGridBuilder_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/DependInfo.cmake --color= Scanning dependencies of target SideChainGridBuilder make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SideChainGridBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o -c /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SideChainGridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/SideChainGridBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SideChainGridBuilder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/SideChainGridBuilder.dir/SideChainGridBuilder.C.o -o ../../../bin/TOOLS/SideChainGridBuilder -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target SideChainGridBuilder make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SimilarityAnalyzer_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SimilarityAnalyzer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target SimilarityAnalyzer_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/DependInfo.cmake --color= Scanning dependencies of target SimilarityAnalyzer make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SimilarityAnalyzer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o -c /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/SimilarityAnalyzer.C:178:8: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 178 | system(c.c_str()); | ~~~~~~^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/SimilarityAnalyzer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimilarityAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer_autogen/mocs_compilation.cpp.o CMakeFiles/SimilarityAnalyzer.dir/SimilarityAnalyzer.C.o -o ../../../bin/TOOLS/SimilarityAnalyzer -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target SimilarityAnalyzer make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleRescorer_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target SimpleRescorer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target SimpleRescorer_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/DependInfo.cmake --color= Scanning dependencies of target SimpleRescorer make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/SimpleRescorer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o -c /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/SimpleRescorer.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/SimpleRescorer cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleRescorer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/SimpleRescorer.dir/SimpleRescorer_autogen/mocs_compilation.cpp.o CMakeFiles/SimpleRescorer.dir/SimpleRescorer.C.o -o ../../../bin/TOOLS/SimpleRescorer -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target SimpleRescorer make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TaGRes_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target TaGRes cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target TaGRes_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/DependInfo.cmake --color= Scanning dependencies of target TaGRes make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TaGRes.dir/TaGRes.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TaGRes_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TaGRes.dir/TaGRes.C.o -c /<>/source/APPLICATIONS/TOOLS/TaGRes.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/APPLICATIONS/TOOLS/TaGRes.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 88%] Linking CXX executable ../../../bin/TOOLS/TaGRes cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TaGRes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TaGRes.dir/TaGRes_autogen/mocs_compilation.cpp.o CMakeFiles/TaGRes.dir/TaGRes.C.o -o ../../../bin/TOOLS/TaGRes -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 88%] Built target TaGRes make -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GridBuilder_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/build make[4]: Entering directory '/<>/build' [ 88%] Automatic MOC for target GridBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 88%] Built target GridBuilder_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/DependInfo.cmake --color= Scanning dependencies of target GridBuilder make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/build make[4]: Entering directory '/<>/build' [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/mocs_compilation.cpp [ 88%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/GridBuilder.dir/GridBuilder.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/GridBuilder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/GridBuilder.dir/GridBuilder.C.o -c /<>/source/APPLICATIONS/TOOLS/GridBuilder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/GridBuilder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/TOOLS/GridBuilder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/GridBuilder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GridBuilder.dir/GridBuilder_autogen/mocs_compilation.cpp.o CMakeFiles/GridBuilder.dir/GridBuilder.C.o -o ../../../bin/TOOLS/GridBuilder -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target GridBuilder make -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target TrajectoryFile2PDBSplitter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target TrajectoryFile2PDBSplitter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target TrajectoryFile2PDBSplitter_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/DependInfo.cmake --color= Scanning dependencies of target TrajectoryFile2PDBSplitter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o -c /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/TOOLS/TrajectoryFile2PDBSplitter.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/TOOLS/TrajectoryFile2PDBSplitter cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/TrajectoryFile2PDBSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter_autogen/mocs_compilation.cpp.o CMakeFiles/TrajectoryFile2PDBSplitter.dir/TrajectoryFile2PDBSplitter.C.o -o ../../../bin/TOOLS/TrajectoryFile2PDBSplitter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target TrajectoryFile2PDBSplitter make -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target WaterFinder_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target WaterFinder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target WaterFinder_autogen make -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/TOOLS /<>/build /<>/build/source/APPLICATIONS/TOOLS /<>/build/source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/DependInfo.cmake --color= Scanning dependencies of target WaterFinder make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build.make source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/TOOLS/CMakeFiles/WaterFinder.dir/WaterFinder.C.o cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/TOOLS/WaterFinder_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/TOOLS -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/WaterFinder.dir/WaterFinder.C.o -c /<>/source/APPLICATIONS/TOOLS/WaterFinder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/property.h:11, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C: In function ‘void removeUnboundWaterNetworks(BALL::Chain*, BALL::System&, BALL::Options&, const double&)’: /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:300:14: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 300 | res_it2 = next_res2; | ^~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C: In function ‘void removeUnboundWaterNetworks(BALL::Chain*, BALL::System&, BALL::Options&, const double&)’: /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:300:14: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 300 | res_it2 = next_res2; | ^~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:349:13: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 349 | res_it1 = next_res1; | ^~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:387:13: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 387 | res_it = tmp_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:562:9: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 562 | it = tmp_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:665:9: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 665 | it = tmp_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:691:8: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 691 | it = tmp_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/TOOLS/WaterFinder.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/TOOLS/WaterFinder cd /<>/build/source/APPLICATIONS/TOOLS && /usr/bin/cmake -E cmake_link_script CMakeFiles/WaterFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/WaterFinder.dir/WaterFinder_autogen/mocs_compilation.cpp.o CMakeFiles/WaterFinder.dir/WaterFinder.C.o -o ../../../bin/TOOLS/WaterFinder -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target WaterFinder make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2hin_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target pdb2hin cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target pdb2hin_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2hin make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2hin.dir/pdb2hin.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2hin_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2hin.dir/pdb2hin.C.o -c /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2hin.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/UTILITIES/pdb2hin cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2hin.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2hin.dir/pdb2hin_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2hin.dir/pdb2hin.C.o -o ../../../bin/UTILITIES/pdb2hin -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target pdb2hin make -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target hin2mol2_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target hin2mol2 cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target hin2mol2_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/DependInfo.cmake --color= Scanning dependencies of target hin2mol2 make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/hin2mol2.dir/hin2mol2.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/hin2mol2_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/hin2mol2.dir/hin2mol2.C.o -c /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/hin2mol2.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/UTILITIES/hin2mol2 cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/hin2mol2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/hin2mol2.dir/hin2mol2_autogen/mocs_compilation.cpp.o CMakeFiles/hin2mol2.dir/hin2mol2.C.o -o ../../../bin/UTILITIES/hin2mol2 -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target hin2mol2 make -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target solvent_accessibility_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target solvent_accessibility cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target solvent_accessibility_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/DependInfo.cmake --color= Scanning dependencies of target solvent_accessibility make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/solvent_accessibility_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o -c /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/solvent_accessibility.C:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/UTILITIES/solvent_accessibility cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/solvent_accessibility.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/solvent_accessibility.dir/solvent_accessibility_autogen/mocs_compilation.cpp.o CMakeFiles/solvent_accessibility.dir/solvent_accessibility.C.o -o ../../../bin/UTILITIES/solvent_accessibility -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target solvent_accessibility make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target assign_positions_from_template_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target assign_positions_from_template cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target assign_positions_from_template_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/DependInfo.cmake --color= Scanning dependencies of target assign_positions_from_template make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_positions_from_template_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o -c /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:75:37: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 75 | ch_it = template_system.beginChain(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/assign_positions_from_template.C:75:37: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ first required here 75 | ch_it = template_system.beginChain(); | ^ [ 91%] Linking CXX executable ../../../bin/UTILITIES/assign_positions_from_template cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_positions_from_template.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template_autogen/mocs_compilation.cpp.o CMakeFiles/assign_positions_from_template.dir/assign_positions_from_template.C.o -o ../../../bin/UTILITIES/assign_positions_from_template -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target assign_positions_from_template make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target assign_bond_orders_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target assign_bond_orders cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target assign_bond_orders_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/DependInfo.cmake --color= Scanning dependencies of target assign_bond_orders make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/build make[4]: Entering directory '/<>/build' [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/mocs_compilation.cpp [ 91%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_bond_orders_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o -c /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_bond_orders.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 91%] Linking CXX executable ../../../bin/UTILITIES/assign_bond_orders cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_bond_orders.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_bond_orders.dir/assign_bond_orders_autogen/mocs_compilation.cpp.o CMakeFiles/assign_bond_orders.dir/assign_bond_orders.C.o -o ../../../bin/UTILITIES/assign_bond_orders -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 91%] Built target assign_bond_orders make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target assign_charges_from_rules_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/build make[4]: Entering directory '/<>/build' [ 91%] Automatic MOC for target assign_charges_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 91%] Built target assign_charges_from_rules_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/DependInfo.cmake --color= Scanning dependencies of target assign_charges_from_rules make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_charges_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o -c /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_charges_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../../bin/UTILITIES/assign_charges_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_charges_from_rules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_charges_from_rules.dir/assign_charges_from_rules.C.o -o ../../../bin/UTILITIES/assign_charges_from_rules -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target assign_charges_from_rules make -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target dcd2dcd_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target dcd2dcd cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target dcd2dcd_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/DependInfo.cmake --color= Scanning dependencies of target dcd2dcd make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/dcd2dcd_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o -c /<>/source/APPLICATIONS/UTILITIES/dcd2dcd.C [ 93%] Linking CXX executable ../../../bin/UTILITIES/dcd2dcd cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcd2dcd.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcd2dcd.dir/dcd2dcd_autogen/mocs_compilation.cpp.o CMakeFiles/dcd2dcd.dir/dcd2dcd.C.o -o ../../../bin/UTILITIES/dcd2dcd -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target dcd2dcd make -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target reconstruct_fragment_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target reconstruct_fragment cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target reconstruct_fragment_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/DependInfo.cmake --color= Scanning dependencies of target reconstruct_fragment make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/reconstruct_fragment_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o -c /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/reconstruct_fragment.C:14: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../../bin/UTILITIES/reconstruct_fragment cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/reconstruct_fragment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment_autogen/mocs_compilation.cpp.o CMakeFiles/reconstruct_fragment.dir/reconstruct_fragment.C.o -o ../../../bin/UTILITIES/reconstruct_fragment -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target reconstruct_fragment make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target assign_radii_from_rules_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target assign_radii_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target assign_radii_from_rules_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/DependInfo.cmake --color= Scanning dependencies of target assign_radii_from_rules make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_radii_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o -c /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_radii_from_rules.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../../bin/UTILITIES/assign_radii_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_radii_from_rules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_radii_from_rules.dir/assign_radii_from_rules.C.o -o ../../../bin/UTILITIES/assign_radii_from_rules -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target assign_radii_from_rules make -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target clip_protein_around_ligand_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target clip_protein_around_ligand cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target clip_protein_around_ligand_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/DependInfo.cmake --color= Scanning dependencies of target clip_protein_around_ligand make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o -c /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:354:33: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 354 | res_it = protein.beginResidue(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:354:33: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 354 | res_it = protein.beginResidue(); | ^ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:358:35: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 358 | atom_it = res_it->beginPDBAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:358:35: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 358 | atom_it = res_it->beginPDBAtom(); | ^ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:363:31: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 363 | lig_it = ligand.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:419:22: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 419 | tmp_res_it = res_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:490:40: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 490 | for (res_it = chain_it->beginResidue(); +res_it; ++res_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:542:20: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 542 | tmp_res_it = res_it; | ^~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:652:42: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 652 | for (res_it = cut_protein->beginResidue(); +res_it; ++res_it) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/APPLICATIONS/UTILITIES/clip_protein_around_ligand.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../../bin/UTILITIES/clip_protein_around_ligand cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/clip_protein_around_ligand.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand_autogen/mocs_compilation.cpp.o CMakeFiles/clip_protein_around_ligand.dir/clip_protein_around_ligand.C.o -o ../../../bin/UTILITIES/clip_protein_around_ligand -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target clip_protein_around_ligand make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target assign_typenames_from_rules_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target assign_typenames_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target assign_typenames_from_rules_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/DependInfo.cmake --color= Scanning dependencies of target assign_typenames_from_rules make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o -c /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/assign_typenames_from_rules.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../../bin/UTILITIES/assign_typenames_from_rules cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/assign_typenames_from_rules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules_autogen/mocs_compilation.cpp.o CMakeFiles/assign_typenames_from_rules.dir/assign_typenames_from_rules.C.o -o ../../../bin/UTILITIES/assign_typenames_from_rules -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 93%] Built target assign_typenames_from_rules make -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target calculate_RMSD_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/build make[4]: Entering directory '/<>/build' [ 93%] Automatic MOC for target calculate_RMSD cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 93%] Built target calculate_RMSD_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/DependInfo.cmake --color= Scanning dependencies of target calculate_RMSD make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/build make[4]: Entering directory '/<>/build' [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/mocs_compilation.cpp [ 93%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/calculate_RMSD_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o -c /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9, from /<>/source/APPLICATIONS/UTILITIES/calculate_RMSD.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../../../bin/UTILITIES/calculate_RMSD cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/calculate_RMSD.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/calculate_RMSD.dir/calculate_RMSD_autogen/mocs_compilation.cpp.o CMakeFiles/calculate_RMSD.dir/calculate_RMSD.C.o -o ../../../bin/UTILITIES/calculate_RMSD -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 95%] Built target calculate_RMSD make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2amber_naming_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/build make[4]: Entering directory '/<>/build' [ 95%] Automatic MOC for target pdb2amber_naming cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 95%] Built target pdb2amber_naming_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2amber_naming make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/build make[4]: Entering directory '/<>/build' [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/mocs_compilation.cpp [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2amber_naming_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o -c /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2amber_naming.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../../../bin/UTILITIES/pdb2amber_naming cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2amber_naming.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2amber_naming.dir/pdb2amber_naming.C.o -o ../../../bin/UTILITIES/pdb2amber_naming -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 95%] Built target pdb2amber_naming make -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target add_hydrogens_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/build make[4]: Entering directory '/<>/build' [ 95%] Automatic MOC for target add_hydrogens cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 95%] Built target add_hydrogens_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/DependInfo.cmake --color= Scanning dependencies of target add_hydrogens make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/build make[4]: Entering directory '/<>/build' [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/mocs_compilation.cpp [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/add_hydrogens_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o -c /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/add_hydrogens.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../../../bin/UTILITIES/add_hydrogens cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/add_hydrogens.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/add_hydrogens.dir/add_hydrogens_autogen/mocs_compilation.cpp.o CMakeFiles/add_hydrogens.dir/add_hydrogens.C.o -o ../../../bin/UTILITIES/add_hydrogens -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 95%] Built target add_hydrogens make -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target atomtyper_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/build make[4]: Entering directory '/<>/build' [ 95%] Automatic MOC for target atomtyper cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 95%] Built target atomtyper_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/DependInfo.cmake --color= Scanning dependencies of target atomtyper make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/build make[4]: Entering directory '/<>/build' [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/mocs_compilation.cpp [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/atomtyper.dir/atomtyper.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/atomtyper_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/atomtyper.dir/atomtyper.C.o -c /<>/source/APPLICATIONS/UTILITIES/atomtyper.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/atomtyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../../../bin/UTILITIES/atomtyper cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/atomtyper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/atomtyper.dir/atomtyper_autogen/mocs_compilation.cpp.o CMakeFiles/atomtyper.dir/atomtyper.C.o -o ../../../bin/UTILITIES/atomtyper -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 95%] Built target atomtyper make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2dcd_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/build make[4]: Entering directory '/<>/build' [ 95%] Automatic MOC for target pdb2dcd cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 95%] Built target pdb2dcd_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/DependInfo.cmake --color= Scanning dependencies of target pdb2dcd make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/build make[4]: Entering directory '/<>/build' [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/mocs_compilation.cpp [ 95%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/pdb2dcd_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o -c /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/pdb2dcd.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable ../../../bin/UTILITIES/pdb2dcd cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2dcd.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pdb2dcd.dir/pdb2dcd_autogen/mocs_compilation.cpp.o CMakeFiles/pdb2dcd.dir/pdb2dcd.C.o -o ../../../bin/UTILITIES/pdb2dcd -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 95%] Built target pdb2dcd make -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target file_converter_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/build make[4]: Entering directory '/<>/build' [ 95%] Automatic MOC for target file_converter cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 95%] Built target file_converter_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/DependInfo.cmake --color= Scanning dependencies of target file_converter make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/file_converter.dir/file_converter.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/file_converter_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/file_converter.dir/file_converter.C.o -c /<>/source/APPLICATIONS/UTILITIES/file_converter.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/file_converter.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/UTILITIES/file_converter cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/file_converter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/file_converter.dir/file_converter_autogen/mocs_compilation.cpp.o CMakeFiles/file_converter.dir/file_converter.C.o -o ../../../bin/UTILITIES/file_converter -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target file_converter make -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target compute_docking_RMSD_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target compute_docking_RMSD cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target compute_docking_RMSD_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/DependInfo.cmake --color= Scanning dependencies of target compute_docking_RMSD make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/compute_docking_RMSD_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o -c /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:86:30: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 86 | for (pi = docked.beginChain(); +pi; ++pi) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:86:30: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ first required here 86 | for (pi = docked.beginChain(); +pi; ++pi) | ^ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:153:31: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>& BALL::BidirectionalIterator, BALL::ChainIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ChainIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 153 | for (pi = docked.beginChain(); +pi; ++pi) | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::ChainIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Chain; Position = BALL::BidirectionalIterator; Traits = BALL::ChainIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 187 | docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:39: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 187 | docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom(); | ^ /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:187:84: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 187 | docked_atom=static_docked.beginAtom(), reference_atom=static_reference.beginAtom(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/APPLICATIONS/UTILITIES/compute_docking_RMSD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/UTILITIES/compute_docking_RMSD cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_docking_RMSD.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD_autogen/mocs_compilation.cpp.o CMakeFiles/compute_docking_RMSD.dir/compute_docking_RMSD.C.o -o ../../../bin/UTILITIES/compute_docking_RMSD -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target compute_docking_RMSD make -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target export_fragment_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target export_fragment cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target export_fragment_autogen make -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/UTILITIES /<>/build /<>/build/source/APPLICATIONS/UTILITIES /<>/build/source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/DependInfo.cmake --color= Scanning dependencies of target export_fragment make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build.make source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/UTILITIES/CMakeFiles/export_fragment.dir/export_fragment.C.o cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/UTILITIES/export_fragment_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -I/<>/build/source/APPLICATIONS/UTILITIES -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/export_fragment.dir/export_fragment.C.o -c /<>/source/APPLICATIONS/UTILITIES/export_fragment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:12: /<>/source/APPLICATIONS/UTILITIES/export_fragment.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 92 | BALL_FOREACH_BOND(system, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:12: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 92 | BALL_FOREACH_BOND(system, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:12: /<>/source/APPLICATIONS/UTILITIES/export_fragment.C: In function ‘int main(int, char**)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/APPLICATIONS/UTILITIES/export_fragment.C:92:2: note: in expansion of macro ‘BALL_FOREACH_BOND’ 92 | BALL_FOREACH_BOND(system, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/UTILITIES/export_fragment cd /<>/build/source/APPLICATIONS/UTILITIES && /usr/bin/cmake -E cmake_link_script CMakeFiles/export_fragment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/export_fragment.dir/export_fragment_autogen/mocs_compilation.cpp.o CMakeFiles/export_fragment.dir/export_fragment.C.o -o ../../../bin/UTILITIES/export_fragment -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target export_fragment make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/BALLVIEW /<>/build /<>/build/source/APPLICATIONS/BALLVIEW /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target BALLView cd /<>/build/source/APPLICATIONS/BALLVIEW && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target BALLView_autogen make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/BALLVIEW /<>/build /<>/build/source/APPLICATIONS/BALLVIEW /<>/build/source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build.make source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build make[4]: Entering directory '/<>/build' make[4]: Nothing to be done for 'source/APPLICATIONS/BALLVIEW/CMakeFiles/BALLView.dir/build'. make[4]: Leaving directory '/<>/build' [ 97%] Built target BALLView make -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target testKekulizer_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target testKekulizer cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target testKekulizer_autogen make -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/DependInfo.cmake --color= Scanning dependencies of target testKekulizer make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/testKekulizer.dir/testKekulizer.C.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/testKekulizer_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/testKekulizer.dir/testKekulizer.C.o -c /<>/source/APPLICATIONS/MMFF94/testKekulizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/source/APPLICATIONS/MMFF94/testKekulizer.C: In function ‘BALL::System* readTestFile(BALL::String)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:74:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 74 | BALL_FOREACH_ATOM(*system, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/source/APPLICATIONS/MMFF94/testKekulizer.C: In function ‘BALL::System* readTestFile(BALL::String)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:74:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 74 | BALL_FOREACH_ATOM(*system, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/source/APPLICATIONS/MMFF94/testKekulizer.C: In function ‘int runtests(const std::vector&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 160 | BALL_FOREACH_BOND(*system, ai, abit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 160 | BALL_FOREACH_BOND(*system, ai, abit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:15: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:8: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/source/APPLICATIONS/MMFF94/testKekulizer.C: In function ‘int runtests(const std::vector&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:160:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 160 | BALL_FOREACH_BOND(*system, ai, abit) | ^~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:182:30: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 182 | abit = (**hit).beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:207:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 207 | BALL_FOREACH_BOND(*system, ai, abit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:18: /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:207:3: note: in expansion of macro ‘BALL_FOREACH_BOND’ 207 | BALL_FOREACH_BOND(*system, ai, abit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/testKekulizer.C:10: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:15: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/MMFF94/testKekulizer cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/testKekulizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testKekulizer.dir/testKekulizer_autogen/mocs_compilation.cpp.o CMakeFiles/testKekulizer.dir/testKekulizer.C.o -o ../../../bin/MMFF94/testKekulizer -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target testKekulizer make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target splitMMFFTestSuiteMolFiles_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target splitMMFFTestSuiteMolFiles cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target splitMMFFTestSuiteMolFiles_autogen make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/DependInfo.cmake --color= Scanning dependencies of target splitMMFFTestSuiteMolFiles make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o -c /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteMolFiles.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/MMFF94/splitMMFFTestSuiteMolFiles cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/splitMMFFTestSuiteMolFiles.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles_autogen/mocs_compilation.cpp.o CMakeFiles/splitMMFFTestSuiteMolFiles.dir/splitMMFFTestSuiteMolFiles.C.o -o ../../../bin/MMFF94/splitMMFFTestSuiteMolFiles -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target splitMMFFTestSuiteMolFiles make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target splitMMFFTestSuiteOptiFiles_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/build make[4]: Entering directory '/<>/build' [ 97%] Automatic MOC for target splitMMFFTestSuiteOptiFiles cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [ 97%] Built target splitMMFFTestSuiteOptiFiles_autogen make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/DependInfo.cmake --color= Scanning dependencies of target splitMMFFTestSuiteOptiFiles make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/build make[4]: Entering directory '/<>/build' [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp [ 97%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o -c /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/splitMMFFTestSuiteOptiFiles.C:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 97%] Linking CXX executable ../../../bin/MMFF94/splitMMFFTestSuiteOptiFiles cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles_autogen/mocs_compilation.cpp.o CMakeFiles/splitMMFFTestSuiteOptiFiles.dir/splitMMFFTestSuiteOptiFiles.C.o -o ../../../bin/MMFF94/splitMMFFTestSuiteOptiFiles -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [ 97%] Built target splitMMFFTestSuiteOptiFiles make -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target readMMFF94TestFile_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/build make[4]: Entering directory '/<>/build' [100%] Automatic MOC for target readMMFF94TestFile cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [100%] Built target readMMFF94TestFile_autogen make -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/DependInfo.cmake --color= Scanning dependencies of target readMMFF94TestFile make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/build make[4]: Entering directory '/<>/build' [100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/mocs_compilation.cpp [100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/readMMFF94TestFile_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o -c /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:32: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:48: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:3: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:34: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:3: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:31: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:3: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:38: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:3: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:34: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:3: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:32: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:3: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:30: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:3: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:20: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:29: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:20: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:31: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:31: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:3: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:18: /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function ‘BALL::System* readTestFile(BALL::String)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:118:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 118 | BALL_FOREACH_ATOM(*system, ait) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:15: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:8: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:15: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:18: /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function ‘BALL::System* readTestFile(BALL::String)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:118:2: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 118 | BALL_FOREACH_ATOM(*system, ait) | ^~~~~~~~~~~~~~~~~ /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C: In function ‘bool testTorsions(BALL::MMFF94&, const BALL::String&, bool, long int&)’: /<>/source/APPLICATIONS/MMFF94/readMMFF94TestFile.C:550:8: warning: variable ‘swap’ set but not used [-Wunused-but-set-variable] 550 | bool swap = false; | ^~~~ [100%] Linking CXX executable ../../../bin/MMFF94/readMMFF94TestFile cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/readMMFF94TestFile.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile_autogen/mocs_compilation.cpp.o CMakeFiles/readMMFF94TestFile.dir/readMMFF94TestFile.C.o -o ../../../bin/MMFF94/readMMFF94TestFile -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [100%] Built target readMMFF94TestFile make -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target compareForces_autogen make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/build make[4]: Entering directory '/<>/build' [100%] Automatic MOC for target compareForces cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_autogen /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces_autogen.dir/AutogenInfo.json Release make[4]: Leaving directory '/<>/build' [100%] Built target compareForces_autogen make -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/depend make[4]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/source/APPLICATIONS/MMFF94 /<>/build /<>/build/source/APPLICATIONS/MMFF94 /<>/build/source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/DependInfo.cmake --color= Scanning dependencies of target compareForces make[4]: Leaving directory '/<>/build' make -f source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build.make source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/build make[4]: Entering directory '/<>/build' [100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/compareForces_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o -c /<>/build/source/APPLICATIONS/MMFF94/compareForces_autogen/mocs_compilation.cpp [100%] Building CXX object source/APPLICATIONS/MMFF94/CMakeFiles/compareForces.dir/compareForces.C.o cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_ATOMIC_DYN_LINK -DBOOST_CHRONO_DYN_LINK -DBOOST_DATE_TIME_DYN_LINK -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_THREAD_DYN_LINK -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/source/APPLICATIONS/MMFF94/compareForces_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/riscv64-linux-gnu/qt5 -isystem /usr/include/riscv64-linux-gnu/qt5/QtCore -isystem /usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/riscv64-linux-gnu/qt5/QtNetwork -isystem /usr/include/riscv64-linux-gnu/qt5/QtXml -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -o CMakeFiles/compareForces.dir/compareForces.C.o -c /<>/source/APPLICATIONS/MMFF94/compareForces.C /<>/source/APPLICATIONS/MMFF94/compareForces.C: In function ‘int main(int, char**)’: /<>/source/APPLICATIONS/MMFF94/compareForces.C:32:14: warning: unused parameter ‘argc’ [-Wunused-parameter] 32 | int main(int argc, char** argv) | ~~~~^~~~ /<>/source/APPLICATIONS/MMFF94/compareForces.C:32:27: warning: unused parameter ‘argv’ [-Wunused-parameter] 32 | int main(int argc, char** argv) | ~~~~~~~^~~~ [100%] Linking CXX executable ../../../bin/MMFF94/compareForces cd /<>/build/source/APPLICATIONS/MMFF94 && /usr/bin/cmake -E cmake_link_script CMakeFiles/compareForces.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compareForces.dir/compareForces_autogen/mocs_compilation.cpp.o CMakeFiles/compareForces.dir/compareForces.C.o -o ../../../bin/MMFF94/compareForces -Wl,-rpath,/<>/build/lib ../../../lib/libBALL.so.1.5 /usr/lib/riscv64-linux-gnu/libboost_chrono.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_date_time.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_iostreams.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_regex.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_serialization.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_system.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_thread.so.1.71.0 /usr/lib/riscv64-linux-gnu/libboost_atomic.so.1.71.0 -lpthread /usr/lib/riscv64-linux-gnu/libQt5Network.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Xml.so.5.12.8 /usr/lib/riscv64-linux-gnu/libQt5Core.so.5.12.8 -lpython3.8 -lpthread make[4]: Leaving directory '/<>/build' [100%] Built target compareForces make[3]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/<>/build' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/<>/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/build/usr/lib/libBALL.so.1.5 -- Installing: /<>/build/usr/lib/libBALL.so -- Installing: /<>/build/usr/lib/libVIEW.so.1.5 -- Set runtime path of "/<>/build/usr/lib/libVIEW.so.1.5" to "" -- Installing: /<>/build/usr/lib/libVIEW.so -- Installing: /<>/build/usr/share/BALL -- Installing: /<>/build/usr/share/BALL/solvation -- Installing: /<>/build/usr/share/BALL/solvation/bondi-vdw.rul -- Installing: /<>/build/usr/share/BALL/solvation/Ooi.ini -- Installing: /<>/build/usr/share/BALL/solvation/PARSE.rul -- Installing: /<>/build/usr/share/BALL/solvation/bondi.rul -- Installing: /<>/build/usr/share/BALL/solvation/PARSE+ions.rul -- Installing: /<>/build/usr/share/BALL/solvation/RDF-AMBER.ini -- Installing: /<>/build/usr/share/BALL/solvation/PCM-radii.rul -- Installing: /<>/build/usr/share/BALL/solvation/Claverie-AMBER.ini -- Installing: /<>/build/usr/share/BALL/solvation/PARSE-ab_initio.rul -- Installing: /<>/build/usr/share/BALL/fragments -- Installing: /<>/build/usr/share/BALL/fragments/CA.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.XPLOR.db -- Installing: /<>/build/usr/share/BALL/fragments/NME.db -- Installing: /<>/build/usr/share/BALL/fragments/T.db -- Installing: /<>/build/usr/share/BALL/fragments/TRP.db -- Installing: /<>/build/usr/share/BALL/fragments/U.db -- Installing: /<>/build/usr/share/BALL/fragments/ASP.db -- Installing: /<>/build/usr/share/BALL/fragments/MSE.db -- Installing: /<>/build/usr/share/BALL/fragments/MG.db -- Installing: /<>/build/usr/share/BALL/fragments/VAL.db -- Installing: /<>/build/usr/share/BALL/fragments/ACE.db -- Installing: /<>/build/usr/share/BALL/fragments/Fragments.db -- Installing: /<>/build/usr/share/BALL/fragments/ILE.db -- Installing: /<>/build/usr/share/BALL/fragments/G.db -- Installing: /<>/build/usr/share/BALL/fragments/ASN.db -- Installing: /<>/build/usr/share/BALL/fragments/HIS.db -- Installing: /<>/build/usr/share/BALL/fragments/ARG.db -- Installing: /<>/build/usr/share/BALL/fragments/GLY.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.CHARMM.db -- Installing: /<>/build/usr/share/BALL/fragments/SER.db -- Installing: /<>/build/usr/share/BALL/fragments/A.db -- Installing: /<>/build/usr/share/BALL/fragments/PCA.db -- Installing: /<>/build/usr/share/BALL/fragments/MET.db -- Installing: /<>/build/usr/share/BALL/fragments/Editing-Fragments.db -- Installing: /<>/build/usr/share/BALL/fragments/THR.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.Amber.db -- Installing: /<>/build/usr/share/BALL/fragments/ZN.db -- Installing: /<>/build/usr/share/BALL/fragments/HOH.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.DNA.db -- Installing: /<>/build/usr/share/BALL/fragments/CYS.db -- Installing: /<>/build/usr/share/BALL/fragments/Indole-Skeleton.db -- Installing: /<>/build/usr/share/BALL/fragments/C.db -- Installing: /<>/build/usr/share/BALL/fragments/LEU.db -- Installing: /<>/build/usr/share/BALL/fragments/GLU.db -- Installing: /<>/build/usr/share/BALL/fragments/ALA.db -- Installing: /<>/build/usr/share/BALL/fragments/LYS.db -- Installing: /<>/build/usr/share/BALL/fragments/PRO.db -- Installing: /<>/build/usr/share/BALL/fragments/GLN.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.Star.db -- Installing: /<>/build/usr/share/BALL/fragments/functionalGroups.smarts -- Installing: /<>/build/usr/share/BALL/fragments/PHE.db -- Installing: /<>/build/usr/share/BALL/fragments/Benzene-Skeleton.db -- Installing: /<>/build/usr/share/BALL/fragments/Pyrrole-Skeleton.db -- Installing: /<>/build/usr/share/BALL/fragments/TYR.db -- Installing: /<>/build/usr/share/BALL/fragments/Names.Discover.db -- Installing: /<>/build/usr/share/BALL/gui-test -- Installing: /<>/build/usr/share/BALL/gui-test/selection.bvp -- Installing: /<>/build/usr/share/BALL/gui-test/selection.btf -- Installing: /<>/build/usr/share/BALL/gui-test/tutorial.btf -- Installing: /<>/build/usr/share/BALL/atomtyping -- Installing: /<>/build/usr/share/BALL/atomtyping/SYBYLTypes.dat -- Installing: /<>/build/usr/share/BALL/atomtyping/GAFFTypes.dat -- Installing: /<>/build/usr/share/BALL/atomtyping/AMBERTypes.dat -- Installing: /<>/build/usr/share/BALL/bond_lengths -- Installing: /<>/build/usr/share/BALL/bond_lengths/BondOrderGAFF.xml -- Installing: /<>/build/usr/share/BALL/bond_lengths/bond_lengths.db -- Installing: /<>/build/usr/share/BALL/bond_lengths/bond_lengths_mmff94.ini -- Installing: /<>/build/usr/share/BALL/bond_lengths/BondOrder.xml -- Installing: /<>/build/usr/share/BALL/rotamers -- Installing: /<>/build/usr/share/BALL/rotamers/bbind99.Aug.lib -- Installing: /<>/build/usr/share/BALL/rotamers/bbdep02.May.sortlib -- Installing: /<>/build/usr/share/BALL/rotamers/bbind02.May.lib -- Installing: /<>/build/usr/share/BALL/rotamers/bbdep02.May.lib -- Installing: /<>/build/usr/share/BALL/NMR -- Installing: /<>/build/usr/share/BALL/NMR/splinedata -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB__psi__phi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD3__hbondstat__ha1bond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD22__index__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD21__hnbond__chi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HG12__ss__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HG12__hnbond__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CO__ssp1__obond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HN__hnlenp1__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD3__chi+1__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB__chi2__chi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE1__obond__ssbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD22__hnlen__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__row__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HZ2__chi-1__chi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CB__indexm1__ssm1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB__chi__aa.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__phi-1__indexm1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD21__psi-1__hbondstat.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HG12__ha1bond__chi+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD1__obond__chi-1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HN__indexp1__row.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB2__chi-1__chi-1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HA__phi__aa.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CA__ha2bond__aa+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB2__index__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD1__ss__aa.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__aa.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HN__phi__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HG13__ha1len__ha1len.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__ha1bond__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE22__psi+1__obond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE21__obond__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HN__indexm1__chi+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__psi-1__psi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD21__index__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE2__ss__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HA__psi__ssbondm1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HA__ha2bond__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CO__ssbondp1__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__indexm1__chi+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CO__aa+1__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CO__psi+1__psi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/N15__psi-1__chi-1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CB__psi+1__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE2__ssbond__ssbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE22__chi-1__index.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HZ__phi__chi-1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CA__phi+1__psi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HA__psi__phi.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CA__phi__ssp1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HZ3__phi+1__phi+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HD3__ha1len__hbondstat.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HE21__psi-1__chi+1.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HA__psi+1__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CB__obond__ss.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/HB__hnbond__hnbond.dat -- Installing: /<>/build/usr/share/BALL/NMR/splinedata/CO__psi+1__obond.dat -- Installing: 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/<>/build/usr/include/BALL/FORMAT/PDBRecords.h -- Installing: /<>/build/usr/include/BALL/FORMAT/parameterSection.h -- Installing: /<>/build/usr/include/BALL/FORMAT/PDBFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/HMOFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/amiraMeshFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/lineBasedFile.iC -- Installing: /<>/build/usr/include/BALL/FORMAT/MOL2File.h -- Installing: /<>/build/usr/include/BALL/FORMAT/pubchemDownloader.h -- Installing: /<>/build/usr/include/BALL/FORMAT/genericMolFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/PDBFile.iC -- Installing: /<>/build/usr/include/BALL/FORMAT/sources.cmake -- Installing: /<>/build/usr/include/BALL/FORMAT/HINFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/PDBInfo.h -- Installing: /<>/build/usr/include/BALL/FORMAT/parameters.h -- Installing: /<>/build/usr/include/BALL/FORMAT/bruker1DFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/MOPACInputFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/SCWRLRotamerFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/lineBasedFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/PDBdefs.h -- Installing: /<>/build/usr/include/BALL/FORMAT/GAMESSLogFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/NMRStarFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/MOLFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/trajectoryFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/paramFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/trajectoryFileFactory.h -- Installing: /<>/build/usr/include/BALL/FORMAT/CCP4File.h -- Installing: /<>/build/usr/include/BALL/FORMAT/DSN6File.h -- Installing: /<>/build/usr/include/BALL/FORMAT/resourceFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/XYZFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/bruker2DFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/INIFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/antechamberFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/SDFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/CIFFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/dockResultFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/format.doc -- Installing: /<>/build/usr/include/BALL/FORMAT/TRRFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/MOPACOutputFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/GAMESSDatFile.h -- Installing: /<>/build/usr/include/BALL/FORMAT/commandlineParser.h -- Installing: /<>/build/usr/include/BALL/FORMAT/molFileFactory.h -- Installing: /<>/build/usr/include/BALL/maths.h -- Installing: /<>/build/usr/include/BALL/PLUGIN -- Installing: /<>/build/usr/include/BALL/PLUGIN/pluginManager.h -- Installing: /<>/build/usr/include/BALL/PLUGIN/sources.cmake -- Installing: /<>/build/usr/include/BALL/PLUGIN/BALLPlugin.h -- Installing: /<>/build/usr/include/BALL/PLUGIN/plugin.doc -- Installing: /<>/build/usr/include/BALL/PLUGIN/pluginHandler.h -- Installing: /<>/build/usr/include/BALL/structure.h -- Installing: /<>/build/usr/include/BALL/KERNEL -- Installing: /<>/build/usr/include/BALL/KERNEL/proteinIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/global.h -- Installing: /<>/build/usr/include/BALL/KERNEL/PTE.iC -- Installing: /<>/build/usr/include/BALL/KERNEL/secondaryStructure.h -- Installing: /<>/build/usr/include/BALL/KERNEL/atomContainer.h -- Installing: /<>/build/usr/include/BALL/KERNEL/nucleicAcid.h -- Installing: /<>/build/usr/include/BALL/KERNEL/bond.iC -- Installing: /<>/build/usr/include/BALL/KERNEL/atomContainerIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/fragment.h -- Installing: /<>/build/usr/include/BALL/KERNEL/predicate.h -- Installing: /<>/build/usr/include/BALL/KERNEL/fragmentIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/atom.iC -- Installing: /<>/build/usr/include/BALL/KERNEL/nucleotide.h -- Installing: /<>/build/usr/include/BALL/KERNEL/molecularInteractions.h -- Installing: /<>/build/usr/include/BALL/KERNEL/sources.cmake -- Installing: /<>/build/usr/include/BALL/KERNEL/protein.h -- Installing: /<>/build/usr/include/BALL/KERNEL/expression.h -- Installing: /<>/build/usr/include/BALL/KERNEL/secondaryStructureIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/selector.h -- Installing: /<>/build/usr/include/BALL/KERNEL/moleculeIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/iterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/nucleicAcidIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/extractors.h -- Installing: /<>/build/usr/include/BALL/KERNEL/bond.h -- Installing: /<>/build/usr/include/BALL/KERNEL/standardPredicates.h -- Installing: /<>/build/usr/include/BALL/KERNEL/forEach.h -- Installing: /<>/build/usr/include/BALL/KERNEL/chain.h -- Installing: /<>/build/usr/include/BALL/KERNEL/system.h -- Installing: /<>/build/usr/include/BALL/KERNEL/expressionTree.h -- Installing: /<>/build/usr/include/BALL/KERNEL/PTE.h -- Installing: /<>/build/usr/include/BALL/KERNEL/atom.h -- Installing: /<>/build/usr/include/BALL/KERNEL/atomIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/PDBAtomIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/molecule.h -- Installing: /<>/build/usr/include/BALL/KERNEL/expressionParser.h -- Installing: /<>/build/usr/include/BALL/KERNEL/chainIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/expressionPredicate.h -- Installing: /<>/build/usr/include/BALL/KERNEL/kernel.doc -- Installing: /<>/build/usr/include/BALL/KERNEL/residue.h -- Installing: /<>/build/usr/include/BALL/KERNEL/residueIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/PDBAtom.h -- Installing: /<>/build/usr/include/BALL/KERNEL/nucleotideIterator.h -- Installing: /<>/build/usr/include/BALL/KERNEL/bondIterator.h -- Installing: /<>/build/usr/include/BALL/concept.h -- Installing: /<>/build/usr/include/BALL/CONFIG -- Installing: /<>/build/usr/include/BALL/CONFIG/sources.cmake -- Installing: /<>/build/usr/include/BALL/SOLVATION -- Installing: /<>/build/usr/include/BALL/SOLVATION/ooiEnergy.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/pair6_12RDFIntegrator.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/solvation.doc -- Installing: /<>/build/usr/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/generalizedBornCase.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/sources.cmake -- Installing: /<>/build/usr/include/BALL/SOLVATION/molecularSurfaceGrid.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/poissonBoltzmann.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/solventParameter.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/pairExpRDFIntegrator.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/claverieParameter.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/solventDescriptor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h -- Installing: /<>/build/usr/include/BALL/SOLVATION/electrostaticPotentialCalculator.h -- Installing: /<>/build/usr/include/BALL/VIEW -- Installing: /<>/build/usr/include/BALL/VIEW/view.doc -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/forceModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/backboneModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/labelModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/surfaceModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/cartoonModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/colorByGridProcessor.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/ballAndStickModel.iC -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/standardColorProcessor.iC -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/models.doc -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/vanDerWaalsModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/colorProcessor.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/atomBondModelBaseProcessor.iC -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/HBondModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/lineModel.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/fieldLineCreator.h -- Installing: /<>/build/usr/include/BALL/VIEW/MODELS/modelProcessor.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/networkPreferences.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/stageSettings.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/charmmConfigurationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/coloringSettingsDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/editSingleShortcut.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/clippingDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/snapShotVisualisation.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/mainControlPreferences.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/stereoSettingsDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/gridVisualizationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/labelDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/shortcutDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/generateCrystalDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/atomOverview.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/fieldLinesDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/modifyRepresentationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/setCamera.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/sources.cmake -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/editSettings.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/dockResultDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/molecularDynamicsDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderConfigurationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/peptideDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/pluginDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/FDPBDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/openSavePreferences.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/preferences.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/dockProgressDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/lightSettings.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/parsedFunctionDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/downloadElectronDensity.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/materialSettings.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/molecularFileDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/exportGeometryDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/contourSurfaceDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/downloadPDBFile.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/pubchemDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/raytraceableContourSurfaceDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/serverPreferences.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/setClippingPlane.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/geometricFitDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/dockDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/modelSettingsDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/displayProperties.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/dialogs.doc -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/amberConfigurationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/minimizationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/pythonSettings.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/assignBondOrderResultsDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/PTEDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/bondProperties.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/compositeProperties.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/MMFF94ConfigurationDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/DIALOGS/undoManagerDialog.h -- Installing: /<>/build/usr/include/BALL/VIEW/PLUGIN -- Installing: /<>/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPluginHandler.h -- Installing: /<>/build/usr/include/BALL/VIEW/PLUGIN/modularWidgetPlugin.h -- Installing: /<>/build/usr/include/BALL/VIEW/PLUGIN/VIEWPlugin.h -- Installing: /<>/build/usr/include/BALL/VIEW/PLUGIN/inputDevPluginHandler.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/representation.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/serverWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/modelInformation.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/snapshotManagerInterface.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/iconLoader.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/message.iC -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/representation.iC -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionModeManager.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/sources.cmake -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/editMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/pickingMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/rotateMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/moveMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/MODES/interactionMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/serverWidget.iC -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/connectionObject.iC -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/UIOperationMode.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/mainControl.iC -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/sources.cmake -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/editOperation.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/geometricObject.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/clippingPlane.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/mainControl.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/connectionObject.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/stage.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/modularWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/compositeManager.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/common.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/shortcutRegistry.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/representationManager.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/preferencesEntry.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/threads.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/message.h -- Installing: /<>/build/usr/include/BALL/VIEW/KERNEL/kernel.doc -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/hotkeyTable.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/molecularStructure.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/pyWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/HTMLView.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/widgets.doc -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/fileObserver.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/datasetControl.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/gridColorWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/textEditorWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/shortcutTableView.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/colorButton.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/sources.cmake -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/scene.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/logView.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/testFramework.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/HTMLPage.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/dockingController.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/helpViewer.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/dockWidget.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/colorTable.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/geometricControl.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/molecularControl.h -- Installing: /<>/build/usr/include/BALL/VIEW/WIDGETS/propertyEditor.h -- Installing: 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/<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/add_hydrogens_BV.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/opengl_benchmark.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/movie_script3.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/BALLView/model.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/add_hydrogens.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/mopac.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/print_forces.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/create_bonds.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/hin2mol2.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/energy.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/load_PDB.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/density_image.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/new_atom.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/amberEnergy.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/PDBChecker.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/write_PDB.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/export_scene.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/bindingEnergy.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/minimization.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/new_representation.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/UTILITIES/assignBondOrders.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos/add_hydrogens.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PYTHON/howtos/assignNMRShifts.py -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/ramachandran.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/EXAMPLES.txt -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/SASAreas.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PDBChecker.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/bindingEnergy.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/addHydrogens.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/assign_chemical_shifts.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/energy.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/PDB2discover.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/amberEnergy.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/glBoundingBoxModel.h -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial1.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bounding_box.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/string_tutorial.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bpti.pdb -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/bounding_box_example.hin -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial3.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/tutorial2.C -- Installing: /<>/build/usr/share/doc/BALL/EXAMPLES/TUTORIAL/pdb4pti.ent -- Installing: /<>/build/usr/lib/cmake/BALL/BALLConfig.cmake -- Installing: /<>/build/usr/lib/cmake/BALL/BALLConfigVersion.cmake -- Installing: /<>/build/usr/lib/cmake/BALL/BALLExport.cmake -- Installing: /<>/build/usr/lib/cmake/BALL/BALLExport-release.cmake -- Installing: /<>/build/usr/bin/BALLView -- Set runtime path of "/<>/build/usr/bin/BALLView" to "" make[2]: Leaving directory '/<>/build' make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' dh_auto_test --no-parallel -- || true cd build && make -j1 test ARGS\+=-j1 make[2]: Entering directory '/<>/build' Running tests... /usr/bin/ctest --force-new-ctest-process -j1 Test project /<>/build Start 1: Socket_test 1/293 Test #1: Socket_test .................................. Passed 1.28 sec Start 2: ClassTest_test 2/293 Test #2: ClassTest_test ............................... Passed 0.39 sec Start 3: Debug_test 3/293 Test #3: Debug_test ................................... Passed 0.30 sec Start 4: RegularExpression_test 4/293 Test #4: RegularExpression_test ....................... Passed 0.41 sec Start 5: GlobalTypes_test 5/293 Test #5: GlobalTypes_test ............................. Passed 0.32 sec Start 6: VersionInfo_test 6/293 Test #6: VersionInfo_test ............................. Passed 0.30 sec Start 7: RTTI_test 7/293 Test #7: RTTI_test .................................... Passed 0.37 sec Start 8: MathsCommon_test 8/293 Test #8: MathsCommon_test ............................. Passed 0.31 sec Start 9: AnalyticalGeometry_test 9/293 Test #9: AnalyticalGeometry_test ...................... Passed 0.38 sec Start 10: Angle_test 10/293 Test #10: Angle_test ................................... Passed 0.39 sec Start 11: Vector2_test 11/293 Test #11: Vector2_test ................................. Passed 0.42 sec Start 12: Vector3_test 12/293 Test #12: Vector3_test ................................. Passed 0.43 sec Start 13: Vector4_test 13/293 Test #13: Vector4_test ................................. Passed 0.34 sec Start 14: Quaternion_test 14/293 Test #14: Quaternion_test .............................. Passed 0.30 sec Start 15: Matrix44_test1 15/293 Test #15: Matrix44_test1 ............................... Passed 0.36 sec Start 16: Matrix44_test2 16/293 Test #16: Matrix44_test2 ............................... Passed 0.42 sec Start 17: NumericalIntegrator_test 17/293 Test #17: NumericalIntegrator_test ..................... Passed 0.29 sec Start 18: Line3_test 18/293 Test #18: Line3_test ................................... Passed 0.33 sec Start 19: Circle3_test 19/293 Test #19: Circle3_test ................................. Passed 0.28 sec Start 20: SimpleBox3_test 20/293 Test #20: SimpleBox3_test .............................. Passed 0.47 sec Start 21: Box3_test 21/293 Test #21: Box3_test .................................... Passed 0.28 sec Start 22: Plane3_test 22/293 Test #22: Plane3_test .................................. Passed 0.38 sec Start 23: Sphere3_test 23/293 Test #23: Sphere3_test ................................. Passed 0.36 sec Start 24: Surface_test 24/293 Test #24: Surface_test ................................. Passed 0.41 sec Start 25: Function_test 25/293 Test #25: Function_test ................................ Passed 0.59 sec Start 26: PiecewiseFunction_test 26/293 Test #26: PiecewiseFunction_test ....................... Passed 0.38 sec Start 27: PiecewisePolynomial_test 27/293 Test #27: PiecewisePolynomial_test ..................... Passed 0.35 sec Start 28: Directory_test 28/293 Test #28: Directory_test ............................... Passed 0.89 sec Start 29: FileSystem_test 29/293 Test #29: FileSystem_test .............................. Passed 0.33 sec Start 30: File_test1 30/293 Test #30: File_test1 ................................... Passed 0.48 sec Start 31: File_test2 31/293 Test #31: File_test2 ................................... Passed 0.46 sec Start 32: Path_test 32/293 Test #32: Path_test .................................... Passed 0.34 sec Start 33: PreciseTime_test 33/293 Test #33: PreciseTime_test ............................. Passed 0.42 sec Start 34: Sysinfo_test 34/293 Test #34: Sysinfo_test ................................. Passed 0.29 sec Start 35: Timer_test 35/293 Test #35: Timer_test ................................... Passed 24.69 sec Start 36: TimeStamp_test 36/293 Test #36: TimeStamp_test ............................... Passed 3.45 sec Start 37: TransformationManager_test 37/293 Test #37: TransformationManager_test ................... Passed 0.18 sec Start 38: Bit_test 38/293 Test #38: Bit_test ..................................... Passed 0.18 sec Start 39: BitVector_test1 39/293 Test #39: BitVector_test1 .............................. Passed 0.20 sec Start 40: BitVector_test2 40/293 Test #40: BitVector_test2 .............................. Passed 0.22 sec Start 41: Contour_test 41/293 Test #41: Contour_test ................................. Passed 0.16 sec Start 42: ContourLine_test 42/293 Test #42: ContourLine_test ............................. Passed 0.16 sec Start 43: Hash_test 43/293 Test #43: Hash_test .................................... Passed 0.17 sec Start 44: HashMap_test 44/293 Test #44: HashMap_test ................................. Passed 0.32 sec Start 45: StringHashMap_test 45/293 Test #45: StringHashMap_test ........................... Passed 0.36 sec Start 46: HashSet_test1 46/293 Test #46: HashSet_test1 ................................ Passed 0.29 sec Start 47: HashSet_test2 47/293 Test #47: HashSet_test2 ................................ Passed 0.32 sec Start 48: HashGrid3_test 48/293 Test #48: HashGrid3_test ............................... Passed 1.14 sec Start 49: HashGridBox3_test 49/293 Test #49: HashGridBox3_test ............................ Passed 0.19 sec Start 50: HashGrid3DataIteratorTraits_test 50/293 Test #50: HashGrid3DataIteratorTraits_test ............. Passed 0.16 sec Start 51: HashGrid3BoxIteratorTraits_test 51/293 Test #51: HashGrid3BoxIteratorTraits_test .............. Passed 0.16 sec Start 52: HashGrid3DataItem_test 52/293 Test #52: HashGrid3DataItem_test ....................... Passed 0.15 sec Start 53: HashGrid3NeighborBoxItem_test 53/293 Test #53: HashGrid3NeighborBoxItem_test ................ Passed 0.17 sec Start 54: Options_test 54/293 Test #54: Options_test ................................. Passed 0.23 sec Start 55: String_test1 55/293 Test #55: String_test1 ................................. Passed 0.19 sec Start 56: String_test2 56/293 Test #56: String_test2 ................................. Passed 0.19 sec Start 57: String_test3 57/293 Test #57: String_test3 ................................. Passed 0.19 sec Start 58: String_test4 58/293 Test #58: String_test4 ................................. Passed 0.19 sec Start 59: String_test5 59/293 Test #59: String_test5 ................................. Passed 0.18 sec Start 60: String_test6 60/293 Test #60: String_test6 ................................. Passed 0.19 sec Start 61: String_test7 61/293 Test #61: String_test7 ................................. Passed 0.33 sec Start 62: String_test8 62/293 Test #62: String_test8 ................................. Passed 0.38 sec Start 63: Substring_test 63/293 Test #63: Substring_test ............................... Passed 0.41 sec Start 64: Triple_test 64/293 Test #64: Triple_test .................................. Passed 0.30 sec Start 65: Quadruple_test 65/293 Test #65: Quadruple_test ............................... Passed 0.30 sec Start 66: RegularData1D_test1 66/293 Test #66: RegularData1D_test1 .......................... Passed 0.33 sec Start 67: RegularData1D_test2 67/293 Test #67: RegularData1D_test2 .......................... Passed 0.30 sec Start 68: RegularData2D_test1 68/293 Test #68: RegularData2D_test1 .......................... Passed 0.29 sec Start 69: RegularData2D_test2 69/293 Test #69: RegularData2D_test2 .......................... Passed 0.27 sec Start 70: RegularData3D_test1 70/293 Test #70: RegularData3D_test1 .......................... Passed 0.24 sec Start 71: RegularData3D_test2 71/293 Test #71: RegularData3D_test2 .......................... Passed 0.25 sec Start 72: ContourSurface_test 72/293 Test #72: ContourSurface_test .......................... Passed 0.19 sec Start 73: LogStream_test 73/293 Test #73: LogStream_test ............................... Passed 0.90 sec Start 74: AutoDeletable_test 74/293 Test #74: AutoDeletable_test ........................... Passed 0.29 sec Start 75: Factory_test 75/293 Test #75: Factory_test ................................. Passed 0.28 sec Start 76: Object_test 76/293 Test #76: Object_test .................................. Passed 0.33 sec Start 77: PersistentObject_test 77/293 Test #77: PersistentObject_test ........................ Passed 0.28 sec Start 78: PersistenceManager_test 78/293 Test #78: PersistenceManager_test ...................... Passed 0.34 sec Start 79: TextPersistenceManager_test 79/293 Test #79: TextPersistenceManager_test .................. Passed 6.58 sec Start 80: Selectable_test 80/293 Test #80: Selectable_test .............................. Passed 0.36 sec Start 81: NamedProperty_test 81/293 Test #81: NamedProperty_test ........................... Passed 0.50 sec Start 82: PropertyManager_test 82/293 Test #82: PropertyManager_test ......................... Passed 0.48 sec Start 83: Composite_test1 83/293 Test #83: Composite_test1 .............................. Passed 0.34 sec Start 84: Composite_test2 84/293 Test #84: Composite_test2 .............................. Passed 0.35 sec Start 85: Composite_test3 85/293 Test #85: Composite_test3 .............................. Passed 0.35 sec Start 86: Composite_test4 86/293 Test #86: Composite_test4 .............................. Passed 1.31 sec Start 87: Composite_test5 87/293 Test #87: Composite_test5 .............................. Passed 0.21 sec Start 88: Composite_test6 88/293 Test #88: Composite_test6 .............................. Passed 0.19 sec Start 89: CompositeCompositeIteratorTraits_test 89/293 Test #89: CompositeCompositeIteratorTraits_test ........ Passed 0.31 sec Start 90: CompositeChildcompositeIteratorTraits_test 90/293 Test #90: CompositeChildcompositeIteratorTraits_test ... Passed 0.31 sec Start 91: CompositeAncestorIteratorTraits_test 91/293 Test #91: CompositeAncestorIteratorTraits_test ......... Passed 0.30 sec Start 92: Embeddable_test 92/293 Test #92: Embeddable_test .............................. Passed 0.30 sec Start 93: BaseIterator_test 93/293 Test #93: BaseIterator_test ............................ Passed 0.30 sec Start 94: ConstForwardIterator_test 94/293 Test #94: ConstForwardIterator_test .................... Passed 0.30 sec Start 95: ForwardIterator_test 95/293 Test #95: ForwardIterator_test ......................... Passed 0.29 sec Start 96: ConstBidirectionalIterator_test 96/293 Test #96: ConstBidirectionalIterator_test .............. Passed 0.30 sec Start 97: BidirectionalIterator_test 97/293 Test #97: BidirectionalIterator_test ................... Passed 0.29 sec Start 98: ConstRandomAccessIterator_test 98/293 Test #98: ConstRandomAccessIterator_test ............... Passed 0.33 sec Start 99: RandomAccessIterator_test 99/293 Test #99: RandomAccessIterator_test .................... Passed 0.31 sec Start 100: ConformationSet_test 100/293 Test #100: ConformationSet_test ......................... Passed 5.61 sec Start 101: DockResult_test 101/293 Test #101: DockResult_test .............................. Passed 0.18 sec Start 102: PoseClustering_test1 102/293 Test #102: PoseClustering_test1 ......................... Passed 112.66 sec Start 103: PoseClustering_test2 103/293 Test #103: PoseClustering_test2 ......................... Passed 108.36 sec Start 104: PoseClustering_test3 104/293 Test #104: PoseClustering_test3 ......................... Passed 23.40 sec Start 105: ScoringFunction_test 105/293 Test #105: ScoringFunction_test ......................... Passed 442.24 sec Start 106: PTE_test 106/293 Test #106: PTE_test ..................................... Passed 0.26 sec Start 107: Atom_test1 107/293 Test #107: Atom_test1 ................................... Passed 0.36 sec Start 108: Atom_test2 108/293 Test #108: Atom_test2 ................................... Passed 0.56 sec Start 109: Bond_test 109/293 Test #109: Bond_test .................................... Passed 0.54 sec Start 110: AtomContainer_test1 110/293 Test #110: AtomContainer_test1 .......................... Passed 0.44 sec Start 111: AtomContainer_test2 111/293 Test #111: AtomContainer_test2 .......................... Passed 0.39 sec Start 112: Fragment_test 112/293 Test #112: Fragment_test ................................ Passed 0.32 sec Start 113: Chain_test 113/293 Test #113: Chain_test ................................... Passed 0.34 sec Start 114: Molecule_test 114/293 Test #114: Molecule_test ................................ Passed 0.32 sec Start 115: SecondaryStructure_test 115/293 Test #115: SecondaryStructure_test ...................... Passed 0.34 sec Start 116: System_test 116/293 Test #116: System_test .................................. Passed 1.21 sec Start 117: Protein_test 117/293 Test #117: Protein_test ................................. Passed 0.67 sec Start 118: PDBAtom_test 118/293 Test #118: PDBAtom_test ................................. Passed 0.48 sec Start 119: NucleicAcid_test 119/293 Test #119: NucleicAcid_test ............................. Passed 0.53 sec Start 120: Nucleotide_test 120/293 Test #120: Nucleotide_test .............................. Passed 0.60 sec Start 121: Residue_test1 121/293 Test #121: Residue_test1 ................................ Passed 0.51 sec Start 122: Residue_test2 122/293 Test #122: Residue_test2 ................................ Passed 0.57 sec Start 123: Expression_test 123/293 Test #123: Expression_test .............................. Passed 0.51 sec Start 124: ExpressionParser_test 124/293 Test #124: ExpressionParser_test ........................ Passed 0.39 sec Start 125: ExpressionPredicate_test 125/293 Test #125: ExpressionPredicate_test ..................... Passed 0.30 sec Start 126: ExpressionTree_test 126/293 Test #126: ExpressionTree_test .......................... Passed 0.37 sec Start 127: KernelPredicate_test 127/293 Test #127: KernelPredicate_test ......................... Passed 0.30 sec Start 128: Selector_test 128/293 Test #128: Selector_test ................................ Passed 0.43 sec Start 129: RuleEvaluator_test 129/293 Test #129: RuleEvaluator_test ........................... Passed 0.41 sec Start 130: StandardPredicates_test1 130/293 Test #130: StandardPredicates_test1 ..................... Passed 0.46 sec Start 131: StandardPredicates_test2 131/293 Test #131: StandardPredicates_test2 ..................... Passed 0.44 sec Start 132: StandardPredicates_test3 132/293 Test #132: StandardPredicates_test3 ..................... Passed 0.29 sec Start 133: StandardPredicates_test4 133/293 Test #133: StandardPredicates_test4 ..................... Passed 0.24 sec Start 134: DefaultProcessors_test 134/293 Test #134: DefaultProcessors_test ....................... Passed 0.33 sec Start 135: FragmentDB_test 135/293 Test #135: FragmentDB_test .............................. Passed 3.98 sec Start 136: NormalizeNamesProcessor_test 136/293 Test #136: NormalizeNamesProcessor_test ................. Passed 1.70 sec Start 137: ForEach_test 137/293 Test #137: ForEach_test ................................. Passed 0.36 sec Start 138: GlobalKernel_test 138/293 Test #138: GlobalKernel_test ............................ Passed 0.34 sec Start 139: CompositeIteratorTraits_test 139/293 Test #139: CompositeIteratorTraits_test ................. Passed 0.33 sec Start 140: AtomIterator_test 140/293 Test #140: AtomIterator_test ............................ Passed 0.31 sec Start 141: AtomBondIteratorTraits_test 141/293 Test #141: AtomBondIteratorTraits_test .................. Passed 0.31 sec Start 142: Extractors_test 142/293 Test #142: Extractors_test .............................. Passed 0.29 sec Start 143: StdIteratorWrapper_test 143/293 Test #143: StdIteratorWrapper_test ...................... Passed 0.79 sec Start 144: Gradient_test 144/293 Test #144: Gradient_test ................................ Passed 0.18 sec Start 145: AtomVector_test 145/293 Test #145: AtomVector_test .............................. Passed 0.18 sec Start 146: MolmecSupport_test 146/293 Test #146: MolmecSupport_test ........................... Passed 1.99 sec Start 147: SnapShot_test 147/293 Test #147: SnapShot_test ................................ Passed 0.28 sec Start 148: SnapShotManager_test 148/293 Test #148: SnapShotManager_test ......................... Passed 1.10 sec Start 149: ForceField_test 149/293 Test #149: ForceField_test .............................. Passed 0.30 sec Start 150: AmberFF_test 150/293 Test #150: AmberFF_test ................................. Passed 2.84 sec Start 151: MMFF94_test 151/293 Test #151: MMFF94_test .................................. Passed 1.92 sec Start 152: CharmmFF_test1 152/293 Test #152: CharmmFF_test1 ............................... Passed 3.45 sec Start 153: CharmmFF_test2 153/293 Test #153: CharmmFF_test2 ............................... Passed 2.88 sec Start 154: EnergyMinimizer_test 154/293 Test #154: EnergyMinimizer_test ......................... Passed 0.64 sec Start 155: LineSearch_test 155/293 Test #155: LineSearch_test .............................. Passed 0.29 sec Start 156: SteepestDescentMinimizer_test 156/293 Test #156: SteepestDescentMinimizer_test ................ Passed 0.97 sec Start 157: ConjugateGradientMinimizer_test 157/293 Test #157: ConjugateGradientMinimizer_test .............. Passed 15.37 sec Start 158: StrangLBFGSMinimizer_test 158/293 Test #158: StrangLBFGSMinimizer_test .................... Passed 5.08 sec Start 159: ShiftedLVMMMinimizer_test1 159/293 Test #159: ShiftedLVMMMinimizer_test1 ................... Passed 7.30 sec Start 160: ShiftedLVMMMinimizer_test2 160/293 Test #160: ShiftedLVMMMinimizer_test2 ................... Passed 14.53 sec Start 161: ShiftedLVMMMinimizer_test3 161/293 Test #161: ShiftedLVMMMinimizer_test3 ................... Passed 1.67 sec Start 162: AtomTypes_test 162/293 Test #162: AtomTypes_test ............................... Passed 0.36 sec Start 163: HBondProcessor_test 163/293 Test #163: HBondProcessor_test .......................... Passed 23.58 sec Start 164: RandomCoilShiftProcessor_test 164/293 Test #164: RandomCoilShiftProcessor_test ................ Passed 0.43 sec Start 165: AnisotropyShiftProcessor_test 165/293 Test #165: AnisotropyShiftProcessor_test ................ Passed 0.44 sec Start 166: ClearShiftProcessor_test 166/293 Test #166: ClearShiftProcessor_test ..................... Passed 0.31 sec Start 167: CreateSpectrumProcessor_test 167/293 Test #167: CreateSpectrumProcessor_test ................. Passed 0.43 sec Start 168: EFShiftProcessor_test 168/293 Test #168: EFShiftProcessor_test ........................ Passed 0.46 sec Start 169: HaighMallionShiftProcessor_test 169/293 Test #169: HaighMallionShiftProcessor_test .............. Passed 1.84 sec Start 170: JohnsonBoveyShiftProcessor_test 170/293 Test #170: JohnsonBoveyShiftProcessor_test .............. Passed 0.49 sec Start 171: ShiftModel_test 171/293 Test #171: ShiftModel_test .............................. Passed 3.73 sec Start 172: ShiftModule_test 172/293 Test #172: ShiftModule_test ............................. Passed 0.32 sec Start 173: Peak_test 173/293 Test #173: Peak_test .................................... Passed 0.30 sec Start 174: PeakList_test 174/293 Test #174: PeakList_test ................................ Passed 0.33 sec Start 175: Spectrum_test 175/293 Test #175: Spectrum_test ................................ Passed 0.30 sec Start 176: AmiraMeshFile_test 176/293 Test #176: AmiraMeshFile_test ........................... Passed 1.63 sec Start 177: AntechamberFile_test 177/293 Test #177: AntechamberFile_test ......................... Passed 1.28 sec Start 178: LineBasedFile_test 178/293 Test #178: LineBasedFile_test ........................... Passed 0.39 sec Start 179: BinaryFileAdaptor_test 179/293 Test #179: BinaryFileAdaptor_test ....................... Passed 0.30 sec Start 180: Bruker1DFile_test 180/293 Test #180: Bruker1DFile_test ............................ Passed 0.21 sec Start 181: Bruker2DFile_test 181/293 Test #181: Bruker2DFile_test ............................ Passed 0.19 sec Start 182: CCP4File_test 182/293 Test #182: CCP4File_test ................................ Passed 0.27 sec Start 183: DockResultFile_test 183/293 Test #183: DockResultFile_test .......................... Passed 11.21 sec Start 184: HMOFile_test 184/293 Test #184: HMOFile_test ................................. Passed 1.31 sec Start 185: INIFile_test1 185/293 Test #185: INIFile_test1 ................................ Passed 0.47 sec Start 186: INIFile_test2 186/293 Test #186: INIFile_test2 ................................ Passed 0.41 sec Start 187: JCAMPFile_test 187/293 Test #187: JCAMPFile_test ............................... Passed 0.42 sec Start 188: KCFFile_test 188/293 Test #188: KCFFile_test ................................. Passed 0.57 sec Start 189: Parameters_test 189/293 Test #189: Parameters_test .............................. Passed 0.34 sec Start 190: ParameterSection_test 190/293 Test #190: ParameterSection_test ........................ Passed 0.37 sec Start 191: ResourceFile_test 191/293 Test #191: ResourceFile_test ............................ Passed 0.41 sec Start 192: GenericMolFile_test 192/293 Test #192: GenericMolFile_test .......................... Passed 0.38 sec Start 193: HINFile_test 193/293 Test #193: HINFile_test ................................. Passed 4.70 sec Start 194: MOLFile_test 194/293 Test #194: MOLFile_test ................................. Passed 0.61 sec Start 195: SDFile_test 195/293 Test #195: SDFile_test .................................. Passed 2.75 sec Start 196: MOL2File_test 196/293 Test #196: MOL2File_test ................................ Passed 0.69 sec Start 197: NMRStarFile_test 197/293 Test #197: NMRStarFile_test ............................. Passed 9.02 sec Start 198: DCDFile_test 198/293 Test #198: DCDFile_test ................................. Passed 1.94 sec Start 199: PDBRecords_test 199/293 Test #199: PDBRecords_test .............................. Passed 0.16 sec Start 200: PDBInfo_test 200/293 Test #200: PDBInfo_test ................................. Passed 0.22 sec Start 201: PDBFile_test 201/293 Test #201: PDBFile_test ................................. Passed 3.88 sec Start 202: TrajectoryFile_test 202/293 Test #202: TrajectoryFile_test .......................... Passed 0.16 sec Start 203: XYZFile_test 203/293 Test #203: XYZFile_test ................................. Passed 0.58 sec Start 204: SCWRLRotamerFile_test 204/293 Test #204: SCWRLRotamerFile_test ........................ Passed 145.28 sec Start 205: AtomicContactEnergy_test 205/293 Test #205: AtomicContactEnergy_test ..................... Passed 2.12 sec Start 206: ComposedEnergyProcessor_test 206/293 Test #206: ComposedEnergyProcessor_test ................. Passed 0.38 sec Start 207: EnergyProcessor_test 207/293 Test #207: EnergyProcessor_test ......................... Passed 0.38 sec Start 208: OoiEnergy_test 208/293 Test #208: OoiEnergy_test ............................... Passed 4.05 sec Start 209: AddHydrogenProcessor_test 209/293 Test #209: AddHydrogenProcessor_test .................... Passed 1.39 sec Start 210: AnalyticalSES_test 210/293 Test #210: AnalyticalSES_test ........................... Passed 0.21 sec Start 211: AssignBondOrderProcessor_test1 211/293 Test #211: AssignBondOrderProcessor_test1 ............... Passed 59.75 sec Start 212: AssignBondOrderProcessor_test2 212/293 Test #212: AssignBondOrderProcessor_test2 ............... Passed 58.55 sec Start 213: AtomBijection_test 213/293 Test #213: AtomBijection_test ........................... Passed 0.24 sec Start 214: BinaryFingerprintMethods_test 214/293 Test #214: BinaryFingerprintMethods_test ................ Passed 8.45 sec Start 215: BindingPocketProcessor_test 215/293 Test #215: BindingPocketProcessor_test .................. Passed 26.49 sec Start 216: ConnectedComponentsProcessor_test 216/293 Test #216: ConnectedComponentsProcessor_test ............ Passed 0.27 sec Start 217: DisulfidBondProcessor_test 217/293 Test #217: DisulfidBondProcessor_test ................... Passed 1.54 sec Start 218: Enumerator_test 218/293 Test #218: Enumerator_test .............................. Passed 3.12 sec Start 219: EnumeratorIndex_test 219/293 Test #219: EnumeratorIndex_test ......................... Passed 0.38 sec Start 220: GeometricProperties_test 220/293 Test #220: GeometricProperties_test ..................... Passed 0.33 sec Start 221: SimpleMolecularGraph_test 221/293 Test #221: SimpleMolecularGraph_test .................... Passed 0.47 sec Start 222: NumericalSAS_test 222/293 Test #222: NumericalSAS_test ............................ Passed 0.28 sec Start 223: PeptideBuilder_test 223/293 Test #223: PeptideBuilder_test .......................... Passed 1.77 sec Start 224: PeptideCapProcessor_test 224/293 Test #224: PeptideCapProcessor_test ..................... Passed 5.38 sec Start 225: Peptides_test 225/293 Test #225: Peptides_test ................................ Passed 0.77 sec Start 226: RadialDistributionFunction_test 226/293 Test #226: RadialDistributionFunction_test .............. Passed 0.32 sec Start 227: RDFIntegrator_test 227/293 Test #227: RDFIntegrator_test ........................... Passed 0.33 sec Start 228: RDFParameter_test 228/293 Test #228: RDFParameter_test ............................ Passed 0.29 sec Start 229: RDFSection_test 229/293 Test #229: RDFSection_test .............................. Passed 0.29 sec Start 230: ReconstructFragmentProcessor_test 230/293 Test #230: ReconstructFragmentProcessor_test ............ Passed 2.70 sec Start 231: ResidueChecker_test 231/293 Test #231: ResidueChecker_test .......................... Passed 0.27 sec Start 232: RMSDMinimizer_test 232/293 Test #232: RMSDMinimizer_test ........................... Passed 0.28 sec Start 233: SideChainPlacementProcessor_test 233/293 Test #233: SideChainPlacementProcessor_test ............. Passed 0.72 sec Start 234: SmilesParser_test 234/293 Test #234: SmilesParser_test ............................ Passed 0.50 sec Start 235: SmartsParser_test 235/293 Test #235: SmartsParser_test ............................ Passed 0.34 sec Start 236: SmartsMatcher_test 236/293 Test #236: SmartsMatcher_test ........................... Passed 1.00 sec Start 237: StructureMapper_test 237/293 Test #237: StructureMapper_test ......................... Passed 1.35 sec Start 238: TransformationProcessor_test 238/293 Test #238: TransformationProcessor_test ................. Passed 0.28 sec Start 239: TranslationProcessor_test 239/293 Test #239: TranslationProcessor_test .................... Passed 0.25 sec Start 240: SurfaceProcessor_test 240/293 Test #240: SurfaceProcessor_test ........................ Passed 0.54 sec Start 241: SecondaryStructureProcessor_test 241/293 Test #241: SecondaryStructureProcessor_test ............. Passed 1.19 sec Start 242: UCK_test 242/293 Test #242: UCK_test ..................................... Passed 0.35 sec Start 243: BuildBondsProcessor_test 243/293 Test #243: BuildBondsProcessor_test ..................... Passed 3.24 sec Start 244: SDGenerator_test 244/293 Test #244: SDGenerator_test ............................. Passed 0.29 sec Start 245: RingAnalyser_test 245/293 Test #245: RingAnalyser_test ............................ Passed 0.28 sec Start 246: ResidueRotamerSet_test 246/293 Test #246: ResidueRotamerSet_test ....................... Passed 2.04 sec Start 247: RotamerLibrary_test 247/293 Test #247: RotamerLibrary_test .......................... Passed 104.75 sec Start 248: PoissonBoltzmann_test 248/293 Test #248: PoissonBoltzmann_test ........................ Passed 5.19 sec Start 249: SolventDescriptor_test 249/293 Test #249: SolventDescriptor_test ....................... Passed 0.31 sec Start 250: SolventParameter_test 250/293 Test #250: SolventParameter_test ........................ Passed 0.59 sec Start 251: ClaverieParameter_test 251/293 Test #251: ClaverieParameter_test ....................... Passed 0.26 sec Start 252: ReissCavFreeEnergyProcessor_test 252/293 Test #252: ReissCavFreeEnergyProcessor_test ............. Passed 0.27 sec Start 253: UhligCavFreeEnergyProcessor_test 253/293 Test #253: UhligCavFreeEnergyProcessor_test ............. Passed 0.26 sec Start 254: PCMCavFreeEnergyProcessor_test 254/293 Test #254: PCMCavFreeEnergyProcessor_test ............... Passed 0.31 sec Start 255: PierottiCavFreeEnergyProcessor_test 255/293 Test #255: PierottiCavFreeEnergyProcessor_test .......... Passed 0.26 sec Start 256: Pair6_12RDFIntegrator_test 256/293 Test #256: Pair6_12RDFIntegrator_test ................... Passed 0.23 sec Start 257: Pair6_12InteractionEnergyProcessor_test 257/293 Test #257: Pair6_12InteractionEnergyProcessor_test ...... Passed 0.91 sec Start 258: PairExpInteractionEnergyProcessor_test 258/293 Test #258: PairExpInteractionEnergyProcessor_test ....... Passed 0.17 sec Start 259: PairExpRDFIntegrator_test 259/293 Test #259: PairExpRDFIntegrator_test .................... Passed 0.19 sec Start 260: PARSE_test 260/293 Test #260: PARSE_test ................................... Passed 2.92 sec Start 261: AromaticityProcessor_test 261/293 Test #261: AromaticityProcessor_test .................... Passed 0.60 sec Start 262: ConnectivityBase_test 262/293 Test #262: ConnectivityBase_test ........................ Passed 0.70 sec Start 263: ConnectivityDescriptors_test 263/293 Test #263: ConnectivityDescriptors_test ................. Passed 0.68 sec Start 264: Descriptor_test 264/293 Test #264: Descriptor_test .............................. Passed 0.47 sec Start 265: Descriptors_test 265/293 Test #265: Descriptors_test ............................. Passed 0.67 sec Start 266: PartialChargeProcessor_test 266/293 Test #266: PartialChargeProcessor_test .................. Passed 0.50 sec Start 267: PartialChargeBase_test 267/293 Test #267: PartialChargeBase_test ....................... Passed 0.50 sec Start 268: PartialChargeDescriptors_test 268/293 Test #268: PartialChargeDescriptors_test ................ Passed 0.53 sec Start 269: RingPerceptionProcessor_test 269/293 Test #269: RingPerceptionProcessor_test ................. Passed 1.15 sec Start 270: SimpleBase_test 270/293 Test #270: SimpleBase_test .............................. Passed 0.67 sec Start 271: SimpleDescriptors_test 271/293 Test #271: SimpleDescriptors_test ....................... Passed 0.76 sec Start 272: SurfaceBase_test 272/293 Test #272: SurfaceBase_test ............................. Passed 1.11 sec Start 273: SurfaceDescriptors_test 273/293 Test #273: SurfaceDescriptors_test ...................... Passed 0.75 sec Start 274: NBModel_test 274/293 Test #274: NBModel_test ................................. Passed 0.31 sec Start 275: ALLModel_test 275/293 Test #275: ALLModel_test ................................ Passed 0.26 sec Start 276: FeatureSelection_test 276/293 Test #276: FeatureSelection_test ........................ Passed 13.27 sec Start 277: GPModel_test 277/293 Test #277: GPModel_test ................................. Passed 0.18 sec Start 278: KNNModel_test 278/293 Test #278: KNNModel_test ................................ Passed 0.31 sec Start 279: KPCRModel_test 279/293 Test #279: KPCRModel_test ............................... Passed 0.32 sec Start 280: KPLSModel_test 280/293 Test #280: KPLSModel_test ............................... Passed 0.31 sec Start 281: LDAModel_test 281/293 Test #281: LDAModel_test ................................ Passed 0.33 sec Start 282: MLRModel_test 282/293 Test #282: MLRModel_test ................................ Passed 0.31 sec Start 283: PCRModel_test 283/293 Test #283: PCRModel_test ................................ Passed 0.32 sec Start 284: PLSModel_test 284/293 Test #284: PLSModel_test ................................ Passed 0.31 sec Start 285: RRModel_test 285/293 Test #285: RRModel_test ................................. Passed 0.31 sec Start 286: SNBModel_test 286/293 Test #286: SNBModel_test ................................ Passed 0.31 sec Start 287: XDRPersistenceManager_test 287/293 Test #287: XDRPersistenceManager_test ................... Passed 1.67 sec Start 288: BallAndStickModel_test 288/293 Test #288: BallAndStickModel_test ....................... Passed 1.56 sec Start 289: AddCartoonModel_test 289/293 Test #289: AddCartoonModel_test ......................... Passed 4.68 sec Start 290: LabelModel_test 290/293 Test #290: LabelModel_test .............................. Passed 1.10 sec Start 291: LineModel_test 291/293 Test #291: LineModel_test ............................... Passed 1.10 sec Start 292: SurfaceModel_test 292/293 Test #292: SurfaceModel_test ............................ Passed 4.20 sec Start 293: HBondModel_test 293/293 Test #293: HBondModel_test .............................. Passed 1.06 sec 100% tests passed, 0 tests failed out of 293 Total Test time (real) = 1422.07 sec make[2]: Leaving directory '/<>/build' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem=cmake --builddirectory=build --with python3 dh_testroot -a -O--buildsystem=cmake -O--builddirectory=build dh_prep -a -O--buildsystem=cmake -O--builddirectory=build rm -f -- debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/python3-ball.substvars debian/ballview.substvars rm -fr -- debian/.debhelper/generated/libball1.5/ debian/libball1.5/ debian/tmp/ debian/.debhelper/generated/libball1.5-dev/ debian/libball1.5-dev/ debian/.debhelper/generated/libballview1.5/ debian/libballview1.5/ debian/.debhelper/generated/libballview1.5-dev/ debian/libballview1.5-dev/ debian/.debhelper/generated/python3-ball/ debian/python3-ball/ debian/.debhelper/generated/ballview/ debian/ballview/ dh_installdirs -a -O--buildsystem=cmake -O--builddirectory=build install -d debian/libball1.5-dev/usr/include/BALL debian/libball1.5-dev/usr/lib/cmake/BALL install -d debian/ballview/usr/bin debian/ballview/usr/share/man/man1 debian/ballview/usr/share/doc/ballview/html debian/ballview/usr/share/applications debian/ballview/usr/share/pixmaps rm -f debian/ballview.debhelper.log debian/libball1.5-dev.debhelper.log debian/libball1.5.debhelper.log debian/libballview1.5-dev.debhelper.log debian/libballview1.5.debhelper.log debian/python3-ball.debhelper.log debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>' mkdir -p debian/libball1.5/usr/lib \ debian/libball1.5-data/usr/share/BALL-1.5 \ debian/libballview1.5/usr/lib \ debian/python3-ball/usr/share/BALL-1.5 \ debian/python3-ball/usr//lib/python3/dist-packages \ debian/ballview/usr/lib/ballview/ mkdir -p debian/ballview/usr/share/BALL-1.5/data/graphics cp -r build/usr/share/BALL/BALLView/* debian/ballview/usr/share/doc/ballview/ cp build/usr/bin/BALLView debian/ballview/usr/lib/ballview/ cp -a debian/bin/* debian/ballview/usr/bin find build/usr/lib/ -name libBALL*.so.* | xargs -r cp --target-directory debian/libball1.5/usr/lib/ find build/usr/lib/ -name libVIEW*.so.* | xargs -r cp --target-directory debian/libballview1.5/usr/lib/ # debian needs the logo in the ballview - package, not in the libball cp build/usr/share/BALL/graphics/ballview*.xpm debian/ballview/usr/share/pixmaps/ cp -r build/usr/share/doc/BALL/EXAMPLES/PYTHON debian/python3-ball/usr/share/BALL-1.5 cp -a source/PYTHON/EXTENSIONS/* debian/python3-ball/usr//lib/python3/dist-packages # -dev packages are arch dependent mkdir -p debian/libball1.5-dev/usr/lib \ debian/libballview1.5-dev/usr/include/BALL \ debian/libballview1.5-dev/usr/lib \ debian/libball1.5-dev/usr/include # move the cmake configuration files to their final location cp -R build/usr/lib/cmake/ debian/libball1.5-dev/usr/lib cp -r build/usr/include/BALL debian/libball1.5-dev/usr/include cp -r build/usr/include/BALL/VIEW debian/libballview1.5-dev/usr/include/BALL # get rid of the VIEW includes in libball-dev rm -rf debian/libball1.5-dev/usr/include/BALL/VIEW # eliminating chrpath settings chmod 755 debian/ballview/usr/lib/ballview/BALLView chrpath -d debian/ballview/usr/lib/ballview/BALLView find debian -name "*.so" | xargs -r chrpath -d make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/.debhelper/generated/libball1.5-data install -d debian/.debhelper/generated/libball1.5 install -d debian/.debhelper/generated/libball1.5-dev install -d debian/.debhelper/generated/libballview1.5 install -d debian/.debhelper/generated/libballview1.5-dev install -d debian/.debhelper/generated/python3-ball cp --reflink=auto -a ./debian/ballview.desktop debian/ballview/usr/share/applications/ install -d debian/.debhelper/generated/ballview install -d debian/.debhelper/generated/libball1.5-doc dh_sip3 (grep -a -s -v sip3:Depends debian/libball1.5.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5.substvars.new mv debian/libball1.5.substvars.new debian/libball1.5.substvars (grep -a -s -v sip3:Depends debian/libball1.5-dev.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libball1.5-dev.substvars.new mv debian/libball1.5-dev.substvars.new debian/libball1.5-dev.substvars (grep -a -s -v sip3:Depends debian/libballview1.5.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libballview1.5.substvars.new mv debian/libballview1.5.substvars.new debian/libballview1.5.substvars (grep -a -s -v sip3:Depends debian/libballview1.5-dev.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/libballview1.5-dev.substvars.new mv debian/libballview1.5-dev.substvars.new debian/libballview1.5-dev.substvars (grep -a -s -v sip3:Depends debian/python3-ball.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/python3-ball.substvars.new mv debian/python3-ball.substvars.new debian/python3-ball.substvars (grep -a -s -v sip3:Depends debian/ballview.substvars; echo sip3:Depends=sip-py3api-12.7) > debian/ballview.substvars.new mv debian/ballview.substvars.new debian/ballview.substvars if [ -d debian/python3-ball ] ; then \ find debian/python3-ball/usr/lib/python*/dist-packages/ -name BALLPyMacros.h -delete ; \ find debian/python3-ball -name CMakeLists.txt -delete ; \ fi make[1]: Leaving directory '/<>' rm -f debian/ballview.debhelper.log debian/libball1.5-dev.debhelper.log debian/libball1.5.debhelper.log debian/libballview1.5-dev.debhelper.log debian/libballview1.5.debhelper.log debian/python3-ball.debhelper.log debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs install -d debian/libball1.5/usr/share/doc/libball1.5 install -p -m0644 debian/copyright debian/libball1.5/usr/share/doc/libball1.5/copyright install -d debian/libball1.5-dev/usr/share/doc/libball1.5-dev install -p -m0644 debian/copyright debian/libball1.5-dev/usr/share/doc/libball1.5-dev/copyright install -d debian/libballview1.5/usr/share/doc/libballview1.5 install -p -m0644 debian/copyright debian/libballview1.5/usr/share/doc/libballview1.5/copyright install -d debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev install -p -m0644 debian/copyright debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev/copyright install -d debian/python3-ball/usr/share/doc/python3-ball install -p -m0644 debian/copyright debian/python3-ball/usr/share/doc/python3-ball/copyright install -p -m0644 debian/copyright debian/ballview/usr/share/doc/ballview/copyright install -d debian/ballview/usr/share/doc-base/ install -p -m0644 debian/ballview.doc-base debian/ballview/usr/share/doc-base/ballview find debian/*/usr/share -type d -empty -delete find debian/*/usr/share -name jquery.js -delete find debian/*/usr/share -name license.txt -delete make[1]: Leaving directory '/<>' dh_installchangelogs -a -O--buildsystem=cmake -O--builddirectory=build install -p -m0644 debian/changelog debian/python3-ball/usr/share/doc/python3-ball/changelog.Debian install -p -m0644 debian/changelog debian/libball1.5/usr/share/doc/libball1.5/changelog.Debian install -p -m0644 debian/changelog debian/libball1.5-dev/usr/share/doc/libball1.5-dev/changelog.Debian install -p -m0644 debian/changelog debian/libballview1.5-dev/usr/share/doc/libballview1.5-dev/changelog.Debian install -p -m0644 debian/changelog debian/ballview/usr/share/doc/ballview/changelog.Debian install -p -m0644 debian/changelog debian/libballview1.5/usr/share/doc/libballview1.5/changelog.Debian dh_installman -a -O--buildsystem=cmake -O--builddirectory=build install -d debian/ballview/usr/share/man/man1/ install -p -m0644 ./debian/ballview.1 debian/ballview/usr/share/man/man1/ballview.1 man-recode --to-code UTF-8 --suffix .dh-new debian/ballview/usr/share/man/man1/ballview.1 mv debian/ballview/usr/share/man/man1/ballview.1.dh-new debian/ballview/usr/share/man/man1/ballview.1 chmod 0644 -- debian/ballview/usr/share/man/man1/ballview.1 dh_python3 -a -O--buildsystem=cmake -O--builddirectory=build D: dh_python3 dh_python3:161: version: 4.20200315 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=cmake', '-O--builddirectory=build'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--builddirectory=build'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.8 (default=3.8) D: dh_python3 debhelper:99: skipping package libball1.5 (missing ${python3:Depends} in Depends) D: dh_python3 debhelper:99: skipping package libball1.5-dev (missing ${python3:Depends} in Depends) D: dh_python3 debhelper:99: skipping package libballview1.5 (missing ${python3:Depends} in Depends) D: dh_python3 debhelper:99: skipping package libballview1.5-dev (missing ${python3:Depends} in Depends) D: dh_python3 debhelper:99: skipping package ballview (missing ${python3:Depends} in Depends) D: dh_python3 debhelper:152: source=ball, binary packages=['python3-ball'] D: dh_python3 dh_python3:183: processing package python3-ball... D: dh_python3 fs:260: package python3-ball details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-ball D: dh_python3 depends:275: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -a -O--buildsystem=cmake -O--builddirectory=build dh_installsystemduser -a -O--buildsystem=cmake -O--builddirectory=build dh_lintian -a -O--buildsystem=cmake -O--builddirectory=build install -d debian/libballview1.5/usr/share/lintian/overrides install -p -m0644 debian/libballview1.5.lintian-overrides debian/libballview1.5/usr/share/lintian/overrides/libballview1.5 install -d debian/libballview1.5-dev/usr/share/lintian/overrides install -p -m0644 debian/libballview1.5-dev.lintian-overrides debian/libballview1.5-dev/usr/share/lintian/overrides/libballview1.5-dev install -d debian/ballview/usr/share/lintian/overrides install -p -m0644 debian/ballview.lintian-overrides debian/ballview/usr/share/lintian/overrides/ballview dh_perl -a -O--buildsystem=cmake -O--builddirectory=build dh_link -a -O--buildsystem=cmake -O--builddirectory=build rm -f debian/ballview/usr/share/man/man1/BALLView.1.gz ln -s ballview.1.gz debian/ballview/usr/share/man/man1/BALLView.1.gz dh_strip_nondeterminism -a -O--buildsystem=cmake -O--builddirectory=build dh_compress -a -O--buildsystem=cmake -O--builddirectory=build cd debian/libball1.5 cd debian/libball1.5-dev cd debian/libballview1.5 cd debian/libballview1.5-dev cd debian/python3-ball cd debian/ballview chmod a-x usr/share/doc/libball1.5-dev/changelog.Debian chmod a-x usr/share/doc/libballview1.5-dev/changelog.Debian chmod a-x usr/share/doc/python3-ball/changelog.Debian chmod a-x usr/share/doc/libballview1.5/changelog.Debian chmod a-x usr/share/doc/libball1.5/changelog.Debian chmod a-x usr/share/doc/ballview/changelog.Debian usr/share/doc/ballview/translations/BALLView-de_DE.ts usr/share/doc/ballview/translations/BALLView-zh_TW.ts usr/share/man/man1/ballview.1 gzip -9nf usr/share/doc/libball1.5-dev/changelog.Debian gzip -9nf usr/share/doc/libballview1.5-dev/changelog.Debian gzip -9nf usr/share/doc/libball1.5/changelog.Debian gzip -9nf usr/share/doc/libballview1.5/changelog.Debian gzip -9nf usr/share/doc/python3-ball/changelog.Debian cd '/<>' cd '/<>' gzip -9nf usr/share/doc/ballview/changelog.Debian usr/share/doc/ballview/translations/BALLView-de_DE.ts usr/share/doc/ballview/translations/BALLView-zh_TW.ts usr/share/man/man1/ballview.1 cd '/<>' cd '/<>' cd '/<>' cd '/<>' dh_fixperms -a -O--buildsystem=cmake -O--builddirectory=build find debian/libball1.5-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libball1.5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libballview1.5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-ball -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/ballview -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libballview1.5-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libball1.5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libballview1.5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/ballview ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libball1.5/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libballview1.5/usr/share/doc -type f -a -true -a ! -regex 'debian/libballview1.5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libball1.5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libballview1.5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libball1.5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libballview1.5/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/ballview/usr/share/doc -type f -a -true -a ! -regex 'debian/ballview/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libballview1.5-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libball1.5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libballview1.5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-ball ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/ballview/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libballview1.5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/ballview/usr/share/man debian/ballview/usr/share/applications debian/ballview/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/ballview -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/ballview/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libballview1.5-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libballview1.5-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libball1.5-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-ball/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-ball/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/ballview/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libballview1.5-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-ball/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libballview1.5-dev/usr/include debian/libballview1.5-dev/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-ball -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-ball/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libballview1.5-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libballview1.5-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libball1.5-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libball1.5-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libball1.5-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libball1.5-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libball1.5-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libball1.5-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=cmake -O--builddirectory=build dh_dwz -a -O--buildsystem=cmake -O--builddirectory=build dwz -- debian/libball1.5/usr/lib/libBALL.so.1.5 dwz -- debian/libballview1.5/usr/lib/libVIEW.so.1.5 dwz -- debian/ballview/usr/lib/ballview/BALLView dh_strip -a -O--buildsystem=cmake -O--builddirectory=build install -d debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/libball1.5/usr/lib/libBALL.so.1.5 debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/ec/7239036a6195cdfebde30c5236f7548efb90eb.debug install -d debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/libballview1.5/usr/lib/libVIEW.so.1.5 debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/fb/162a8c74f58510429448431a48ddc24258486c.debug install -d debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/ballview/usr/lib/ballview/BALLView debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/a3/d7fc431022b6b120820be18c776a116ddcf360.debug chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/a3/d7fc431022b6b120820be18c776a116ddcf360.debug chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/a3/d7fc431022b6b120820be18c776a116ddcf360.debug strip --remove-section=.comment --remove-section=.note debian/ballview/usr/lib/ballview/BALLView objcopy --add-gnu-debuglink debian/.debhelper/ballview/dbgsym-root/usr/lib/debug/.build-id/a3/d7fc431022b6b120820be18c776a116ddcf360.debug debian/ballview/usr/lib/ballview/BALLView install -d debian/.debhelper/ballview/dbgsym-root/usr/share/doc ln -s ballview debian/.debhelper/ballview/dbgsym-root/usr/share/doc/ballview-dbgsym chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/fb/162a8c74f58510429448431a48ddc24258486c.debug chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/fb/162a8c74f58510429448431a48ddc24258486c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libballview1.5/usr/lib/libVIEW.so.1.5 objcopy --add-gnu-debuglink debian/.debhelper/libballview1.5/dbgsym-root/usr/lib/debug/.build-id/fb/162a8c74f58510429448431a48ddc24258486c.debug debian/libballview1.5/usr/lib/libVIEW.so.1.5 install -d debian/.debhelper/libballview1.5/dbgsym-root/usr/share/doc ln -s libballview1.5 debian/.debhelper/libballview1.5/dbgsym-root/usr/share/doc/libballview1.5-dbgsym chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/ec/7239036a6195cdfebde30c5236f7548efb90eb.debug chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/ec/7239036a6195cdfebde30c5236f7548efb90eb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libball1.5/usr/lib/libBALL.so.1.5 objcopy --add-gnu-debuglink debian/.debhelper/libball1.5/dbgsym-root/usr/lib/debug/.build-id/ec/7239036a6195cdfebde30c5236f7548efb90eb.debug debian/libball1.5/usr/lib/libBALL.so.1.5 install -d debian/.debhelper/libball1.5/dbgsym-root/usr/share/doc ln -s libball1.5 debian/.debhelper/libball1.5/dbgsym-root/usr/share/doc/libball1.5-dbgsym dh_makeshlibs -a -O--buildsystem=cmake -O--builddirectory=build rm -f debian/libball1.5/DEBIAN/shlibs install -d debian/libball1.5/DEBIAN echo "libBALL 1.5 libball1.5 (>= 1.5.0+git20180813.37fc53c)" >> debian/libball1.5/DEBIAN/shlibs chmod 0644 -- debian/libball1.5/DEBIAN/shlibs chown 0:0 -- debian/libball1.5/DEBIAN/shlibs mv debian/.debhelper/generated/libball1.5/triggers.new debian/.debhelper/generated/libball1.5/triggers rm -f debian/libball1.5-dev/DEBIAN/shlibs rm -f debian/libballview1.5/DEBIAN/shlibs install -d debian/libballview1.5/DEBIAN echo "libVIEW 1.5 libballview1.5 (>= 1.5.0+git20180813.37fc53c)" >> debian/libballview1.5/DEBIAN/shlibs chmod 0644 -- debian/libballview1.5/DEBIAN/shlibs chown 0:0 -- debian/libballview1.5/DEBIAN/shlibs mv debian/.debhelper/generated/libballview1.5/triggers.new debian/.debhelper/generated/libballview1.5/triggers rm -f debian/libballview1.5-dev/DEBIAN/shlibs rm -f debian/python3-ball/DEBIAN/shlibs rm -f debian/ballview/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=cmake -O--builddirectory=build dpkg-shlibdeps -Tdebian/libball1.5.substvars debian/libball1.5/usr/lib/libBALL.so.1.5 dpkg-shlibdeps -Tdebian/libballview1.5.substvars debian/libballview1.5/usr/lib/libVIEW.so.1.5 install -d debian/ballview/DEBIAN dpkg-shlibdeps -Tdebian/ballview.substvars debian/ballview/usr/lib/ballview/BALLView dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ballview/usr/lib/ballview/BALLView was not linked against libGLEW.so.2.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: symbol __glewGenBuffersARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dpkg-shlibdeps: warning: symbol glewInit used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dpkg-shlibdeps: warning: symbol __glewBindBufferARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dpkg-shlibdeps: warning: symbol __glewDeleteBuffersARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dpkg-shlibdeps: warning: symbol __glewTexImage3D used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dpkg-shlibdeps: warning: symbol __glewBufferDataARB used by debian/libballview1.5/usr/lib/libVIEW.so.1.5 found in none of the libraries dh_installdeb -a -O--buildsystem=cmake -O--builddirectory=build install -p -m0644 debian/.debhelper/generated/libball1.5/triggers debian/libball1.5/DEBIAN/triggers install -d debian/libball1.5-dev/DEBIAN install -p -m0644 debian/.debhelper/generated/libballview1.5/triggers debian/libballview1.5/DEBIAN/triggers install -d debian/libballview1.5-dev/DEBIAN install -d debian/python3-ball/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-ball/DEBIAN/postinst cat debian/python3-ball.postinst.debhelper >> debian/python3-ball/DEBIAN/postinst chmod 0755 -- debian/python3-ball/DEBIAN/postinst chown 0:0 -- debian/python3-ball/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-ball/DEBIAN/prerm cat debian/python3-ball.prerm.debhelper >> debian/python3-ball/DEBIAN/prerm chmod 0755 -- debian/python3-ball/DEBIAN/prerm chown 0:0 -- debian/python3-ball/DEBIAN/prerm dh_gencontrol -a -O--buildsystem=cmake -O--builddirectory=build echo misc:Depends= >> debian/libballview1.5-dev.substvars echo misc:Pre-Depends= >> debian/libballview1.5-dev.substvars dpkg-gencontrol -plibballview1.5-dev -ldebian/changelog -Tdebian/libballview1.5-dev.substvars -Pdebian/libballview1.5-dev echo misc:Depends= >> debian/libball1.5-dev.substvars echo misc:Pre-Depends= >> debian/libball1.5-dev.substvars dpkg-gencontrol -plibball1.5-dev -ldebian/changelog -Tdebian/libball1.5-dev.substvars -Pdebian/libball1.5-dev echo misc:Depends= >> debian/python3-ball.substvars echo misc:Pre-Depends= >> debian/python3-ball.substvars dpkg-gencontrol -ppython3-ball -ldebian/changelog -Tdebian/python3-ball.substvars -Pdebian/python3-ball echo misc:Depends= >> debian/libball1.5.substvars echo misc:Pre-Depends= >> debian/libball1.5.substvars install -d debian/.debhelper/libball1.5/dbgsym-root/DEBIAN dpkg-gencontrol -plibball1.5 -ldebian/changelog -Tdebian/libball1.5.substvars -Pdebian/.debhelper/libball1.5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=libball1.5-dbgsym "-DDepends=libball1.5 (= \${binary:Version})" "-DDescription=debug symbols for libball1.5" -DBuild-Ids=ec7239036a6195cdfebde30c5236f7548efb90eb -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/libballview1.5.substvars echo misc:Pre-Depends= >> debian/libballview1.5.substvars install -d debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN dpkg-gencontrol -plibballview1.5 -ldebian/changelog -Tdebian/libballview1.5.substvars -Pdebian/.debhelper/libballview1.5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=libballview1.5-dbgsym "-DDepends=libballview1.5 (= \${binary:Version})" "-DDescription=debug symbols for libballview1.5" -DBuild-Ids=fb162a8c74f58510429448431a48ddc24258486c -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/ballview.substvars echo misc:Pre-Depends= >> debian/ballview.substvars install -d debian/.debhelper/ballview/dbgsym-root/DEBIAN dpkg-gencontrol -pballview -ldebian/changelog -Tdebian/ballview.substvars -Pdebian/.debhelper/ballview/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=ballview-dbgsym "-DDepends=ballview (= \${binary:Version})" "-DDescription=debug symbols for ballview" -DBuild-Ids=a3d7fc431022b6b120820be18c776a116ddcf360 -DSection=debug -DPackage-Type=ddeb -UReplaces -UBreaks dpkg-gencontrol: warning: Depends field of package python3-ball: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package python3-ball: substitution variable ${sip:Depends} used, but is not defined dpkg-gencontrol: warning: package libball1.5: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibball1.5 -ldebian/changelog -Tdebian/libball1.5.substvars -Pdebian/libball1.5 dpkg-gencontrol: warning: package ballview: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/control dpkg-gencontrol -pballview -ldebian/changelog -Tdebian/ballview.substvars -Pdebian/ballview dpkg-gencontrol: warning: package libballview1.5: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibballview1.5 -ldebian/changelog -Tdebian/libballview1.5.substvars -Pdebian/libballview1.5 dpkg-gencontrol: warning: package python3-ball: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/python3-ball/DEBIAN/control chown 0:0 -- debian/python3-ball/DEBIAN/control dpkg-gencontrol: warning: package libballview1.5-dev: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/libballview1.5-dev/DEBIAN/control chown 0:0 -- debian/libballview1.5-dev/DEBIAN/control dpkg-gencontrol: warning: package libball1.5: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/libball1.5/DEBIAN/control chown 0:0 -- debian/libball1.5/DEBIAN/control dpkg-gencontrol: warning: package ballview: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/ballview/DEBIAN/control chown 0:0 -- debian/ballview/DEBIAN/control dpkg-gencontrol: warning: package libball1.5-dev: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/libball1.5-dev/DEBIAN/control chown 0:0 -- debian/libball1.5-dev/DEBIAN/control dpkg-gencontrol: warning: package libballview1.5: substitution variable ${sip3:Depends} unused, but is defined chmod 0644 -- debian/libballview1.5/DEBIAN/control chown 0:0 -- debian/libballview1.5/DEBIAN/control dh_md5sums -a -O--buildsystem=cmake -O--builddirectory=build cd debian/libball1.5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libballview1.5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/ballview >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-ball >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libballview1.5-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libball1.5-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libball1.5/DEBIAN/md5sums chown 0:0 -- debian/libball1.5/DEBIAN/md5sums chmod 0644 -- debian/libballview1.5/DEBIAN/md5sums chown 0:0 -- debian/libballview1.5/DEBIAN/md5sums chmod 0644 -- debian/ballview/DEBIAN/md5sums chown 0:0 -- debian/ballview/DEBIAN/md5sums cd debian/.debhelper/libball1.5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/libballview1.5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/ballview/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-ball/DEBIAN/md5sums chown 0:0 -- debian/python3-ball/DEBIAN/md5sums chmod 0644 -- debian/libballview1.5-dev/DEBIAN/md5sums chown 0:0 -- debian/libballview1.5-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/ballview/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/libball1.5-dev/DEBIAN/md5sums chown 0:0 -- debian/libball1.5-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=cmake -O--builddirectory=build dpkg-deb --build debian/libball1.5 .. dpkg-deb --build debian/libball1.5-dev .. dpkg-deb --build debian/python3-ball .. install -d debian/.debhelper/scratch-space/build-libballview1.5 dpkg-deb --build debian/.debhelper/libballview1.5/dbgsym-root debian/.debhelper/scratch-space/build-libballview1.5 install -d debian/.debhelper/scratch-space/build-ballview dpkg-deb --build debian/.debhelper/ballview/dbgsym-root debian/.debhelper/scratch-space/build-ballview INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing ballview-dbgsym (in debian/.debhelper/ballview/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing libball1.5 (in debian/libball1.5); do_strip: , oemstrip: pkgstriptranslations: processing libball1.5-dev (in debian/libball1.5-dev); do_strip: , oemstrip: pkgstriptranslations: processing python3-ball (in debian/python3-ball); do_strip: , oemstrip: pkgstriptranslations: processing libballview1.5-dbgsym (in debian/.debhelper/libballview1.5/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/ballview/dbgsym-root/DEBIAN/control, package ballview-dbgsym, directory debian/.debhelper/ballview/dbgsym-root pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " dpkg-deb: building package 'ballview-dbgsym' in 'debian/.debhelper/scratch-space/build-ballview/ballview-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. pkgstripfiles: processing control file: debian/python3-ball/DEBIAN/control, package python3-ball, directory debian/python3-ball INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... Renaming ballview-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb to ballview-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb mv debian/.debhelper/scratch-space/build-ballview/ballview-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.deb ../ballview-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.ddeb pkgstripfiles: processing control file: debian/libball1.5/DEBIAN/control, package libball1.5, directory debian/libball1.5 pkgstripfiles: processing control file: debian/libball1.5-dev/DEBIAN/control, package libball1.5-dev, directory debian/libball1.5-dev INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (libball1.5-dev) ... pkgstripfiles: Truncating usr/share/doc/libball1.5/changelog.Debian.gz to topmost ten records INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: Running PNG optimization (using 8 cpus) for package libball1.5 ... INFO: pkgstripfiles: waiting for lock (libball1.5-dev) ... pkgstripfiles: No PNG files. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " dpkg-deb: building package 'libball1.5' in '../libball1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. INFO: pkgstripfiles: waiting for lock (python3-ball) ... Searching for duplicated docs in dependency libball1.5... INFO: pkgstripfiles: waiting for lock (python3-ball) ... symlinking changelog.Debian.gz in libball1.5-dev to file in libball1.5 pkgstripfiles: Running PNG optimization (using 8 cpus) for package libball1.5-dev ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libball1.5-dev' in '../libball1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: processing control file: debian/.debhelper/libballview1.5/dbgsym-root/DEBIAN/control, package libballview1.5-dbgsym, directory debian/.debhelper/libballview1.5/dbgsym-root dpkg-deb: building package 'libballview1.5-dbgsym' in 'debian/.debhelper/scratch-space/build-libballview1.5/libballview1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... dpkg-deb --build debian/libballview1.5 .. INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstriptranslations version 144 INFO: pkgstripfiles: waiting for lock (python3-ball) ... install -d debian/.debhelper/scratch-space/build-libball1.5 dpkg-deb --build debian/.debhelper/libball1.5/dbgsym-root debian/.debhelper/scratch-space/build-libball1.5 INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstriptranslations: processing libballview1.5 (in debian/libballview1.5); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstriptranslations version 144 INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstriptranslations: processing libball1.5-dbgsym (in debian/.debhelper/libball1.5/dbgsym-root); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: processing control file: debian/libballview1.5/DEBIAN/control, package libballview1.5, directory debian/libballview1.5 INFO: pkgstripfiles: waiting for lock (python3-ball) ... Searching for duplicated docs in dependency libball1.5... symlinking changelog.Debian.gz in libballview1.5 to file in libball1.5 INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: Running PNG optimization (using 8 cpus) for package libballview1.5 ... pkgstripfiles: No PNG files. INFO: pkgstripfiles: waiting for lock (python3-ball) ... dpkg-deb: building package 'libballview1.5' in '../libballview1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... Renaming libballview1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb to libballview1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb mv debian/.debhelper/scratch-space/build-libballview1.5/libballview1.5-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.deb ../libballview1.5-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.ddeb dpkg-deb --build debian/libballview1.5-dev .. pkgstripfiles: processing control file: debian/.debhelper/libball1.5/dbgsym-root/DEBIAN/control, package libball1.5-dbgsym, directory debian/.debhelper/libball1.5/dbgsym-root INFO: pkgstripfiles: waiting for lock (python3-ball) ... dpkg-deb: building package 'libball1.5-dbgsym' in 'debian/.debhelper/scratch-space/build-libball1.5/libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstriptranslations version 144 INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstriptranslations: processing libballview1.5-dev (in debian/libballview1.5-dev); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: processing control file: debian/libballview1.5-dev/DEBIAN/control, package libballview1.5-dev, directory debian/libballview1.5-dev INFO: pkgstripfiles: waiting for lock (python3-ball) ... Searching for duplicated docs in dependency libballview1.5... symlinking changelog.Debian.gz in libballview1.5-dev to file in libball1.5 INFO: pkgstripfiles: waiting for lock (python3-ball) ... pkgstripfiles: Running PNG optimization (using 8 cpus) for package libballview1.5-dev ... pkgstripfiles: No PNG files. INFO: pkgstripfiles: waiting for lock (python3-ball) ... dpkg-deb: building package 'libballview1.5-dev' in '../libballview1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. Searching for duplicated docs in dependency libball1.5... symlinking changelog.Debian.gz in python3-ball to file in libball1.5 pkgstripfiles: Running PNG optimization (using 8 cpus) for package python3-ball ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-ball' in '../python3-ball_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. dpkg-deb --build debian/ballview .. INFO: pkgstriptranslations version 144 pkgstriptranslations: processing ballview (in debian/ballview); do_strip: , oemstrip: Renaming libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.deb to libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb mv debian/.debhelper/scratch-space/build-libball1.5/libball1.5-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.deb ../libball1.5-dbgsym_1.5.0\+git20180813.37fc53c-6build1_riscv64.ddeb debian/ballview/usr/share/applications/ballview.desktop: does not have gettext domain, not stripping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ballview/DEBIAN/control, package ballview, directory debian/ballview Searching for duplicated docs in dependency libball1.5... symlinking changelog.Debian.gz in ballview to file in libball1.5 Searching for duplicated docs in dependency libballview1.5... Searching for duplicated docs in dependency python3-ball... pkgstripfiles: Running PNG optimization (using 8 cpus) for package ballview ... pkgstripfiles: No PNG files. dpkg-deb: building package 'ballview' in '../ballview_1.5.0+git20180813.37fc53c-6build1_riscv64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../ball_1.5.0+git20180813.37fc53c-6build1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-05-02T22:19:17Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ ball_1.5.0+git20180813.37fc53c-6build1_riscv64.changes: ------------------------------------------------------- Format: 1.8 Date: Sat, 02 May 2020 08:34:06 +0200 Source: ball Binary: ballview libball1.5 libball1.5-dev libballview1.5 libballview1.5-dev python3-ball Architecture: riscv64 Version: 1.5.0+git20180813.37fc53c-6build1 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Gianfranco Costamagna Description: ballview - free molecular modeling and molecular graphics tool libball1.5 - Biochemical Algorithms Library libball1.5-dev - Header files for the Biochemical Algorithms Library libballview1.5 - Biochemical Algorithms Library, VIEW framework libballview1.5-dev - Header files for the VIEW part of the Biochemical Algorithms Libr python3-ball - Python bindings for the Biochemical Algorithms Library Changes: ball (1.5.0+git20180813.37fc53c-6build1) groovy; urgency=medium . * Rebuild against new sip 4.19.22. Checksums-Sha1: 7a4687b053755ec095255c09582749f401d30a4e 16544 ball_1.5.0+git20180813.37fc53c-6build1_riscv64.buildinfo 630a2e22756669767fb44dfb2efb9a64907c912a 1333720 ballview-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb 4ab8fb990466e98772fa7aa8d305a8a30806cfcf 198332 ballview_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 72d475ebfe17fbdfbca66ee02e223c7f7b748b65 52707660 libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb a43f6c9fcccbfe21f08c7a2af8ab111adcdbf2cd 532280 libball1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb b6c792f0edf8375ee88c7b6ea14af66391249e47 2935888 libball1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb d9d9b647f42033b5ccf62a878c92061bf88d8f42 21431220 libballview1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb e1be138647f9c69c9a89f2fed21715dbfab920dd 143056 libballview1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 874909cd0af338419df38ec1506926ec31cda890 1320504 libballview1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 619ab11198128cea98435854652877abb3d0af57 69128 python3-ball_1.5.0+git20180813.37fc53c-6build1_riscv64.deb Checksums-Sha256: 1de35c399c735d374c05adea27997eaf6f8998cf03f9e14be28433e969d01fc0 16544 ball_1.5.0+git20180813.37fc53c-6build1_riscv64.buildinfo 218e577d4b6f04923961e0b42db95292be744d9a320ddd265b602c5a77cbb965 1333720 ballview-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb 03dcf7c6793ae6b1e7aa1543bee53b6d1e1f0133d9beeb09f53839cd13376056 198332 ballview_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 4b3f0d8e41a94d2c4b69df82dc6349d4c4ba29c791bec06ea24fa3bd8296fc1a 52707660 libball1.5-dbgsym_1.5.0+git20180813.37fc53c-6build1_riscv64.ddeb adeb15ca0510d6ad3092efe2de562d1e536aa860126cbf60b3825fb4517e0df2 532280 libball1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 8f6883052f5b9b79958a993f599cf0ef8de956f8b088507cde67be237f982451 2935888 libball1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb 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base-passwd (= 3.5.47), bash (= 5.0-6ubuntu1), binutils (= 2.34-6ubuntu1), binutils-common (= 2.34-6ubuntu1), binutils-riscv64-linux-gnu (= 2.34-6ubuntu1), bison (= 2:3.5.3+dfsg-1), bsdmainutils (= 11.1.2ubuntu3), bsdutils (= 1:2.34-0.1ubuntu9), build-essential (= 12.8ubuntu1), bzip2 (= 1.0.8-2), chrpath (= 0.16-2), cmake (= 3.16.3-1ubuntu1), cmake-data (= 3.16.3-1ubuntu1), coreutils (= 8.30-3ubuntu2), cpp (= 4:9.3.0-1ubuntu2), cpp-9 (= 9.3.0-11ubuntu2), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13ubuntu1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-python (= 4.20200315), dh-strip-nondeterminism (= 1.8.0-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7ubuntu3), dpkg-dev (= 1.19.7ubuntu3), dwz (= 0.13-5), file (= 1:5.38-4), findutils (= 4.7.0-1ubuntu1), flex (= 2.6.4-6.2), fontconfig (= 2.13.1-2ubuntu3), fontconfig-config (= 2.13.1-2ubuntu3), fonts-dejavu-core (= 2.37-1), g++ (= 4:9.3.0-1ubuntu2), g++-9 (= 9.3.0-11ubuntu2), gcc (= 4:9.3.0-1ubuntu2), gcc-10-base (= 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libboost-date-time1.71-dev (= 1.71.0-6ubuntu6), libboost-date-time1.71.0 (= 1.71.0-6ubuntu6), libboost-dev (= 1.71.0.0ubuntu2), libboost-iostreams-dev (= 1.71.0.0ubuntu2), libboost-iostreams1.71-dev (= 1.71.0-6ubuntu6), libboost-iostreams1.71.0 (= 1.71.0-6ubuntu6), libboost-math-dev (= 1.71.0.0ubuntu2), libboost-math1.71-dev (= 1.71.0-6ubuntu6), libboost-math1.71.0 (= 1.71.0-6ubuntu6), libboost-regex-dev (= 1.71.0.0ubuntu2), libboost-regex1.71-dev (= 1.71.0-6ubuntu6), libboost-regex1.71.0 (= 1.71.0-6ubuntu6), libboost-serialization1.71-dev (= 1.71.0-6ubuntu6), libboost-serialization1.71.0 (= 1.71.0-6ubuntu6), libboost-system-dev (= 1.71.0.0ubuntu2), libboost-system1.71-dev (= 1.71.0-6ubuntu6), libboost-system1.71.0 (= 1.71.0-6ubuntu6), libboost-thread-dev (= 1.71.0.0ubuntu2), libboost-thread1.71-dev (= 1.71.0-6ubuntu6), libboost-thread1.71.0 (= 1.71.0-6ubuntu6), libboost1.71-dev (= 1.71.0-6ubuntu6), libbrotli1 (= 1.0.7-6.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.31-0ubuntu9), libc-dev-bin (= 2.31-0ubuntu9), libc6 (= 2.31-0ubuntu9), libc6-dev (= 2.31-0ubuntu9), libcap-ng0 (= 0.7.9-2.1build1), libcap2 (= 1:2.33-1), libcap2-bin (= 1:2.33-1), libcc1-0 (= 10-20200425-1ubuntu2), libcom-err2 (= 1.45.6-1ubuntu1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.15-1ubuntu1), libcrypt1 (= 1:4.4.15-1ubuntu1), libctf-nobfd0 (= 2.34-6ubuntu1), libctf0 (= 2.34-6ubuntu1), libcups2 (= 2.3.3-1), libcurl4 (= 7.68.0-1ubuntu2), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu2), libdbus-1-3 (= 1.12.16-2ubuntu2), libdebconfclient0 (= 0.251ubuntu1), libdebhelper-perl (= 13ubuntu1), libdouble-conversion3 (= 3.1.5-5build1), libdpkg-perl (= 1.19.7ubuntu3), libdrm-common (= 2.4.101-2), libdrm-nouveau2 (= 2.4.101-2), libdrm-radeon1 (= 2.4.101-2), libdrm2 (= 2.4.101-2), libegl-dev (= 1.3.1-1), libegl-mesa0 (= 20.0.4-2ubuntu1), libegl1 (= 1.3.1-1), libeigen3-dev (= 3.3.7-2), libelf1 (= 0.176-1.1build1), libevdev2 (= 1.9.0+dfsg-1), libexpat1 (= 2.2.9-1build1), libexpat1-dev (= 2.2.9-1build1), libffi7 (= 3.3-4), libfftw3-bin (= 3.3.8-2ubuntu1), libfftw3-dev (= 3.3.8-2ubuntu1), libfftw3-double3 (= 3.3.8-2ubuntu1), libfftw3-single3 (= 3.3.8-2ubuntu1), libfile-stripnondeterminism-perl (= 1.8.0-1), libfontconfig1 (= 2.13.1-2ubuntu3), libfreetype6 (= 2.10.1-2), libgbm1 (= 20.0.4-2ubuntu1), libgcc-9-dev (= 9.3.0-11ubuntu2), libgcc-s1 (= 10-20200425-1ubuntu2), libgcrypt20 (= 1.8.5-5ubuntu1), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libgl-dev (= 1.3.1-1), libgl1 (= 1.3.1-1), libgl1-mesa-dri (= 20.0.4-2ubuntu1), libglapi-mesa (= 20.0.4-2ubuntu1), libglew-dev (= 2.1.0-4), libglew2.1 (= 2.1.0-4), libglib2.0-0 (= 2.64.2-1), libglu1-mesa (= 9.0.1-1build1), libglu1-mesa-dev (= 9.0.1-1build1), libglvnd0 (= 1.3.1-1), libglx-dev (= 1.3.1-1), libglx-mesa0 (= 20.0.4-2ubuntu1), libglx0 (= 1.3.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.13-2ubuntu1), libgomp1 (= 10-20200425-1ubuntu2), libgpg-error0 (= 1.37-1), libgraphite2-3 (= 1.3.14-1), libgsl-dev (= 2.5+dfsg-6build1), libgsl23 (= 2.5+dfsg-6build1), libgslcblas0 (= 2.5+dfsg-6build1), libgssapi-krb5-2 (= 1.17-6ubuntu4), libgssapi3-heimdal (= 7.7.0+dfsg-1ubuntu1), libgstreamer-plugins-base1.0-0 (= 1.16.2-4), libgstreamer1.0-0 (= 1.16.2-2), libgudev-1.0-0 (= 1:233-1), libharfbuzz0b (= 2.6.4-1ubuntu4), libhcrypto4-heimdal (= 7.7.0+dfsg-1ubuntu1), libheimbase1-heimdal (= 7.7.0+dfsg-1ubuntu1), libheimntlm0-heimdal (= 7.7.0+dfsg-1ubuntu1), libhogweed5 (= 3.5.1+really3.5.1-2), libhx509-5-heimdal (= 7.7.0+dfsg-1ubuntu1), libhyphen0 (= 2.8.8-7), libice-dev (= 2:1.0.10-0ubuntu1), libice6 (= 2:1.0.10-0ubuntu1), libicu-dev (= 66.1-2ubuntu2), libicu66 (= 66.1-2ubuntu2), libidn2-0 (= 2.3.0-1), libinput-bin (= 1.15.5-1), libinput10 (= 1.15.5-1), libisl22 (= 0.22.1-1), libjpeg-turbo8 (= 2.0.3-0ubuntu1), libjpeg8 (= 8c-2ubuntu8), libjsoncpp1 (= 1.7.4-3.1ubuntu2), libk5crypto3 (= 1.17-6ubuntu4), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-1ubuntu1), libkrb5-3 (= 1.17-6ubuntu4), libkrb5support0 (= 1.17-6ubuntu4), libldap-2.4-2 (= 2.4.49+dfsg-2ubuntu1), libldap-common (= 2.4.49+dfsg-2ubuntu1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1ubuntu9), libmpc3 (= 1.1.0-1), libmpdec2 (= 2.4.2-3), libmpfr6 (= 4.0.2-1), libmtdev1 (= 1.1.5-1.1), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.40.0-1build1), liborc-0.4-0 (= 1:0.4.31-1), libp11-kit0 (= 0.23.20-1build1), libpam-modules (= 1.3.1-5ubuntu4), libpam-modules-bin (= 1.3.1-5ubuntu4), libpam-runtime (= 1.3.1-5ubuntu4), libpam0g (= 1.3.1-5ubuntu4), libpcre2-16-0 (= 10.34-7), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12build1), libperl5.30 (= 5.30.0-10), libpipeline1 (= 1.5.2-2build1), libpng16-16 (= 1.6.37-2), libprocps8 (= 2:3.3.16-4ubuntu1), libpsl5 (= 0.21.0-1ubuntu1), libpthread-stubs0-dev (= 0.4-1), libpython3-dev (= 3.8.2-0ubuntu2), libpython3-stdlib (= 3.8.2-0ubuntu2), libpython3.8 (= 3.8.2-1ubuntu1.1), libpython3.8-dev (= 3.8.2-1ubuntu1.1), libpython3.8-minimal (= 3.8.2-1ubuntu1.1), libpython3.8-stdlib (= 3.8.2-1ubuntu1.1), libqt5concurrent5 (= 5.12.8+dfsg-0ubuntu1), libqt5core5a (= 5.12.8+dfsg-0ubuntu1), libqt5dbus5 (= 5.12.8+dfsg-0ubuntu1), libqt5designer5 (= 5.12.8-0ubuntu1), libqt5designercomponents5 (= 5.12.8-0ubuntu1), libqt5gui5 (= 5.12.8+dfsg-0ubuntu1), libqt5help5 (= 5.12.8-0ubuntu1), libqt5network5 (= 5.12.8+dfsg-0ubuntu1), libqt5opengl5 (= 5.12.8+dfsg-0ubuntu1), libqt5opengl5-dev (= 5.12.8+dfsg-0ubuntu1), libqt5positioning5 (= 5.12.8+dfsg-0ubuntu1), libqt5printsupport5 (= 5.12.8+dfsg-0ubuntu1), libqt5qml5 (= 5.12.8-0ubuntu1), libqt5quick5 (= 5.12.8-0ubuntu1), libqt5quickwidgets5 (= 5.12.8-0ubuntu1), libqt5sensors5 (= 5.12.8-0ubuntu1), libqt5sql5 (= 5.12.8+dfsg-0ubuntu1), libqt5sql5-sqlite (= 5.12.8+dfsg-0ubuntu1), libqt5test5 (= 5.12.8+dfsg-0ubuntu1), libqt5webchannel5 (= 5.12.8-0ubuntu1), libqt5webkit5 (= 5.212.0~alpha4-1ubuntu2), libqt5widgets5 (= 5.12.8+dfsg-0ubuntu1), libqt5xml5 (= 5.12.8+dfsg-0ubuntu1), libreadline8 (= 8.0-4), librhash0 (= 1.3.9-1), libroken18-heimdal (= 7.7.0+dfsg-1ubuntu1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libselinux1 (= 3.0-1build2), libsensors-config (= 1:3.6.0-2ubuntu1), libsensors5 (= 1:3.6.0-2ubuntu1), libsigsegv2 (= 2.12-2), libsm-dev (= 2:1.2.3-1), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.34-0.1ubuntu9), libsqlite3-0 (= 3.31.1-5), libssh-4 (= 0.9.3-2ubuntu2), libssl1.1 (= 1.1.1f-1ubuntu2), libstdc++-9-dev (= 9.3.0-11ubuntu2), libstdc++6 (= 10-20200425-1ubuntu2), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.5-2ubuntu1), libtasn1-6 (= 4.16.0-2), libtidy5deb1 (= 2:5.6.0-11), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libuchardet0 (= 0.0.6-3build1), libudev1 (= 245.5-2ubuntu1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1ubuntu9), libuv1 (= 1.35.0-2ubuntu1), libvulkan-dev (= 1.2.135.0-2), libvulkan1 (= 1.2.135.0-2), libwacom-common (= 1.3-2ubuntu1), libwacom2 (= 1.3-2ubuntu1), libwayland-client0 (= 1.18.0-1), libwayland-server0 (= 1.18.0-1), libwebp6 (= 0.6.1-2), libwind0-heimdal (= 7.7.0+dfsg-1ubuntu1), libwoff1 (= 1.0.2-1build2), libx11-6 (= 2:1.6.9-2ubuntu1), libx11-data (= 2:1.6.9-2ubuntu1), libx11-dev (= 2:1.6.9-2ubuntu1), libx11-xcb1 (= 2:1.6.9-2ubuntu1), libxau-dev (= 1:1.0.9-0ubuntu1), libxau6 (= 1:1.0.9-0ubuntu1), libxcb-dri2-0 (= 1.14-2), libxcb-dri3-0 (= 1.14-2), libxcb-glx0 (= 1.14-2), libxcb-icccm4 (= 0.4.1-1.1), libxcb-image0 (= 0.4.0-1build1), libxcb-keysyms1 (= 0.4.0-1build1), libxcb-present0 (= 1.14-2), libxcb-randr0 (= 1.14-2), libxcb-render-util0 (= 0.3.9-1build1), libxcb-render0 (= 1.14-2), libxcb-shape0 (= 1.14-2), libxcb-shm0 (= 1.14-2), libxcb-sync1 (= 1.14-2), libxcb-util1 (= 0.4.0-0ubuntu3), libxcb-xfixes0 (= 1.14-2), libxcb-xinerama0 (= 1.14-2), libxcb-xinput0 (= 1.14-2), libxcb-xkb1 (= 1.14-2), libxcb1 (= 1.14-2), libxcb1-dev (= 1.14-2), libxdamage1 (= 1:1.1.5-2), libxdmcp-dev (= 1:1.1.3-0ubuntu1), libxdmcp6 (= 1:1.1.3-0ubuntu1), libxext-dev (= 2:1.3.4-0ubuntu1), libxext6 (= 2:1.3.4-0ubuntu1), libxfixes3 (= 1:5.0.3-2), libxkbcommon-x11-0 (= 0.10.0-1), libxkbcommon0 (= 0.10.0-1), libxml2 (= 2.9.10+dfsg-5), libxmu-dev (= 2:1.1.3-0ubuntu1), libxmu-headers (= 2:1.1.3-0ubuntu1), libxmu6 (= 2:1.1.3-0ubuntu1), libxrender-dev (= 1:0.9.10-1), libxrender1 (= 1:0.9.10-1), libxshmfence1 (= 1.3-1), libxslt1.1 (= 1.1.34-4), libxt-dev (= 1:1.1.5-1), libxt6 (= 1:1.1.5-1), libxxf86vm1 (= 1:1.1.4-1build1), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.4.0-24.28), login (= 1:4.8.1-1ubuntu5), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), make (= 4.2.1-1.3), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), mime-support (= 3.64ubuntu1), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.0-10), perl-base (= 5.30.0-10), perl-modules-5.30 (= 5.30.0-10), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21), procps (= 2:3.3.16-4ubuntu1), python3 (= 3.8.2-0ubuntu2), python3-dev (= 3.8.2-0ubuntu2), python3-distutils (= 3.8.2-1ubuntu1), python3-lib2to3 (= 3.8.2-1ubuntu1), python3-minimal (= 3.8.2-0ubuntu2), python3-sip (= 4.19.22+dfsg-1), python3-sip-dev (= 4.19.22+dfsg-1), python3.8 (= 3.8.2-1ubuntu1.1), python3.8-dev (= 3.8.2-1ubuntu1.1), python3.8-minimal (= 3.8.2-1ubuntu1.1), qhelpgenerator-qt5 (= 5.12.8-0ubuntu1), qt5-assistant (= 5.12.8-0ubuntu1), qt5-qmake (= 5.12.8+dfsg-0ubuntu1), qt5-qmake-bin (= 5.12.8+dfsg-0ubuntu1), qtattributionsscanner-qt5 (= 5.12.8-0ubuntu1), qtbase5-dev (= 5.12.8+dfsg-0ubuntu1), qtbase5-dev-tools (= 5.12.8+dfsg-0ubuntu1), qtchooser (= 66-2build1), qttools5-dev (= 5.12.8-0ubuntu1), qttools5-dev-tools (= 5.12.8-0ubuntu1), readline-common (= 8.0-4), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sip-dev (= 4.19.22+dfsg-1), sysvinit-utils (= 2.96-3ubuntu1), tar (= 1.30+dfsg-7), tidy (= 2:5.6.0-11), tzdata (= 2019c-3ubuntu1), ucf (= 3.0038+nmu1), util-linux (= 2.34-0.1ubuntu9), x11-common (= 1:7.7+19ubuntu14), x11proto-core-dev (= 2019.2-1ubuntu1), x11proto-dev (= 2019.2-1ubuntu1), x11proto-xext-dev (= 2019.2-1ubuntu1), xkb-data (= 2.29-2), xorg-sgml-doctools (= 1:1.11-1), xtrans-dev (= 1.4.0-1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-2ubuntu1), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1588401246" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ ballview_1.5.0+git20180813.37fc53c-6build1_riscv64.deb ------------------------------------------------------ new Debian package, version 2.0. size 198332 bytes: control archive=2424 bytes. 1771 bytes, 28 lines control 3721 bytes, 49 lines md5sums Package: ballview Source: ball Version: 1.5.0+git20180813.37fc53c-6build1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 524 Depends: libball1.5 (>= 1.5.0+git20180813.37fc53c), libballview1.5 (>= 1.5.0+git20180813.37fc53c), libc6 (>= 2.27), libgcc-s1 (>= 3.0), libglew2.1 (>= 1.12.0), libqt5core5a (>= 5.3.0), libqt5gui5 (>= 5.0.2) | libqt5gui5-gles (>= 5.0.2), libqt5opengl5 (>= 5.0.2), libqt5widgets5 (>= 5.0.2), libstdc++6 (>= 5.2), python3-ball Section: science Priority: optional Homepage: http://www.ball-project.org/ Description: free molecular modeling and molecular graphics tool BALLView provides fast OpenGL-based visualization of molecular structures, molecular mechanics methods (minimization, MD simulation using the AMBER, CHARMM, and MMFF94 force fields), calculation and visualization of electrostatic properties (FDPB) and molecular editing features. . BALLView can be considered a graphical user interface on the basis of BALL (Biochemical Algorithms Library) with a focus on the most common demands of protein chemists and biophysicists in particular. It is developed in the groups of Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany) and Oliver Kohlbacher (University of Tuebingen, Germany). BALL is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. 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./usr/share/lintian/overrides/ballview drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/share/man/ drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2020-05-02 06:34 ./usr/share/man/man1/BALLView.1.gz -> ballview.1.gz -rw-r--r-- root/root 941 2020-05-02 06:34 ./usr/share/man/man1/ballview.1.gz drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/share/pixmaps/ -rw-r--r-- root/root 85770 2020-05-02 06:34 ./usr/share/pixmaps/ballview.xpm -rw-r--r-- root/root 6026 2020-05-02 06:34 ./usr/share/pixmaps/ballview_32x32.xpm -rw-r--r-- root/root 8938 2020-05-02 06:34 ./usr/share/pixmaps/ballview_48x48.xpm -rw-r--r-- root/root 12746 2020-05-02 06:34 ./usr/share/pixmaps/ballview_64x64.xpm libball1.5-dev_1.5.0+git20180813.37fc53c-6build1_riscv64.deb ------------------------------------------------------------ new Debian package, version 2.0. size 532280 bytes: control archive=16132 bytes. 1339 bytes, 28 lines control 45442 bytes, 595 lines md5sums Package: libball1.5-dev Source: ball Version: 1.5.0+git20180813.37fc53c-6build1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 3689 Depends: libball1.5 (= 1.5.0+git20180813.37fc53c-6build1) Suggests: libball1.5-doc Breaks: libball1.3-dev, libball1.4-dev Replaces: libball1.4-dev Section: libdevel Priority: optional Homepage: http://www.ball-project.org/ Description: Header files for the Biochemical Algorithms Library BALL (Biochemical Algorithms Library) is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. It provides an extensive set of data structures as well as classes for Molecular Mechanics, advanced solvation methods, comparison and analysis of protein structures, file import/export, and visualization. BALL is currently being developed in the groups of Oliver Kohlbacher (University of Tuebingen, Germany), Andreas Hildebrandt (Saarland University, Saarbruecken, Germany), and Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany). . This package comprises the header files allowing to create one's own applications with the BALL library. drwxr-xr-x root/root 0 2020-05-02 06:34 ./ drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/ drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/include/ drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/include/BALL/ -rw-r--r-- root/root 2570 2020-05-02 06:34 ./usr/include/BALL/BALL.doc drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/include/BALL/COMMON/ -rw-r--r-- root/root 283 2020-05-02 06:34 ./usr/include/BALL/COMMON/common.doc -rw-r--r-- root/root 4629 2020-05-02 06:34 ./usr/include/BALL/COMMON/constants.h -rw-r--r-- root/root 3193 2020-05-02 06:34 ./usr/include/BALL/COMMON/create.h -rw-r--r-- root/root 2059 2020-05-02 06:34 ./usr/include/BALL/COMMON/debug.h -rw-r--r-- root/root 15574 2020-05-02 06:34 ./usr/include/BALL/COMMON/exception.h -rw-r--r-- root/root 7269 2020-05-02 06:34 ./usr/include/BALL/COMMON/global.h -rw-r--r-- root/root 2174 2020-05-02 06:34 ./usr/include/BALL/COMMON/hash.h 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-------------------------------------------------------- new Debian package, version 2.0. size 2935888 bytes: control archive=1316 bytes. 1482 bytes, 26 lines control 205 bytes, 3 lines md5sums 54 bytes, 1 lines shlibs 70 bytes, 2 lines triggers Package: libball1.5 Source: ball Version: 1.5.0+git20180813.37fc53c-6build1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 8894 Depends: libboost-iostreams1.71.0, libboost-regex1.71.0-icu66, libboost-serialization1.71.0, libboost-thread1.71.0, libc6 (>= 2.27), libgcc-s1 (>= 3.4), libqt5core5a (>= 5.5.0), libqt5network5 (>= 5.0.2), libqt5xml5 (>= 5.0.2), libstdc++6 (>= 9), libball1.5-data Section: libs Priority: optional Homepage: http://www.ball-project.org/ Description: Biochemical Algorithms Library BALL (Biochemical Algorithms Library) is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. It provides an extensive set of data structures as well as classes for Molecular Mechanics, advanced solvation methods, comparison and analysis of protein structures, file import/export, and visualization. BALL is currently being developed in the groups of Oliver Kohlbacher (University of Tuebingen, Germany), Andreas Hildebrandt (Saarland University, Saarbruecken, Germany), and Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany). . 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../libball1.5/changelog.Debian.gz -rw-r--r-- root/root 2225 2020-03-09 10:45 ./usr/share/doc/libballview1.5-dev/copyright drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-05-02 06:34 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 117 2020-03-09 10:45 ./usr/share/lintian/overrides/libballview1.5-dev libballview1.5_1.5.0+git20180813.37fc53c-6build1_riscv64.deb ------------------------------------------------------------ new Debian package, version 2.0. size 1320504 bytes: control archive=1328 bytes. 1593 bytes, 25 lines control 207 bytes, 3 lines md5sums 58 bytes, 1 lines shlibs 70 bytes, 2 lines triggers Package: libballview1.5 Source: ball Version: 1.5.0+git20180813.37fc53c-6build1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 4435 Depends: libball1.5 (>= 1.5.0+git20180813.37fc53c), libboost-iostreams1.71.0, libc6 (>= 2.27), libgcc-s1 (>= 3.4), libgl1, libglu1-mesa | libglu1, libqt5core5a (>= 5.12.2), libqt5gui5 (>= 5.8.0) | libqt5gui5-gles (>= 5.8.0), libqt5network5 (>= 5.0.2), libqt5opengl5 (>= 5.0.2), libqt5printsupport5 (>= 5.0.2), libqt5test5 (>= 5.0.2), libqt5widgets5 (>= 5.11.0~rc1), libstdc++6 (>= 5.2) Section: libs Priority: optional Homepage: http://www.ball-project.org/ Description: Biochemical Algorithms Library, VIEW framework BALL (Biochemical Algorithms Library) is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. It provides an extensive set of data structures as well as classes for Molecular Mechanics, advanced solvation methods, comparison and analysis of protein structures, file import/export, and visualization. BALL is currently being developed in the groups of Oliver Kohlbacher (University of Tuebingen, Germany), Andreas Hildebrandt (Saarland University, Saarbruecken, Germany), and Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany). . This package contains the view parts of BALL (libVIEW). 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+------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 4004968 Build-Time: 55555 Distribution: groovy-proposed Host Architecture: riscv64 Install-Time: 733 Job: ball_1.5.0+git20180813.37fc53c-6build1.dsc Machine Architecture: riscv64 Package: ball Package-Time: 56371 Source-Version: 1.5.0+git20180813.37fc53c-6build1 Space: 4004968 Status: successful Version: 1.5.0+git20180813.37fc53c-6build1 -------------------------------------------------------------------------------- Finished at 2020-05-02T22:19:17Z Build needed 15:39:31, 4004968k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 Scanning for processes to kill in build PACKAGEBUILD-19247879 RUN: /usr/share/launchpad-buildd/bin/in-target umount-chroot --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 Stopping target for build PACKAGEBUILD-19247879 RUN: /usr/share/launchpad-buildd/bin/in-target remove-build --backend=chroot --series=groovy --arch=riscv64 PACKAGEBUILD-19247879 Removing build PACKAGEBUILD-19247879