https://launchpad.net/ubuntu/+source/bambamc/0.0.50-4/+build/20255717 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-058 4.15.0-122-generic #124-Ubuntu SMP Thu Oct 15 13:09:19 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 6 Nov 17:15:08 ntpdate[1641]: adjust time server 10.211.37.1 offset -0.014357 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20255717 --image-type chroot /home/buildd/filecache-default/6663ab897c1b9684e4da3138ea2f806b3d40e7b1 Creating target for build PACKAGEBUILD-20255717 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20255717 Starting target for build PACKAGEBUILD-20255717 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20255717 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20255717 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20255717 Updating target for build PACKAGEBUILD-20255717 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [88.4 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [88.4 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [117 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf Packages [1339 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe armhf Packages [12.3 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5330 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf Packages [168 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [65.6 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf Packages [1479 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [510 kB] Fetched 22.2 MB in 8s (2931 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files base-passwd binutils binutils-arm-linux-gnueabihf binutils-common cpp-10 fakeroot g++-10 gcc-10 gcc-10-base libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcap2 libcc1-0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libfakeroot libgcc-10-dev libgcc-s1 libgomp1 libidn2-0 libip4tc2 libmpc3 libncurses6 libncursesw6 libnpth0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 linux-libc-dev ncurses-base ncurses-bin systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata 60 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 203 MB of archives. After this operation, 596 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt-dev armhf 1:4.4.17-1ubuntu1 [113 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt1 armhf 1:4.4.17-1ubuntu1 [86.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc6-dev armhf 2.32-0ubuntu4 [1581 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc-dev-bin armhf 2.32-0ubuntu4 [29.6 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf linux-libc-dev armhf 5.8.0-26.27 [1135 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-common all 1.2.6-3 [7444 B] Get:7 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-dev armhf 1.2.6-3 [175 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc3 armhf 1.2.6-3 [66.1 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcc1-0 armhf 10.2.0-16ubuntu1 [34.7 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf gcc-10-base armhf 10.2.0-16ubuntu1 [19.6 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgcc-s1 armhf 10.2.0-16ubuntu1 [36.3 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgomp1 armhf 10.2.0-16ubuntu1 [87.2 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libatomic1 armhf 10.2.0-16ubuntu1 [7240 B] Get:14 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libasan6 armhf 10.2.0-16ubuntu1 [328 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libubsan1 armhf 10.2.0-16ubuntu1 [122 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf g++-10 armhf 10.2.0-16ubuntu1 [63.0 MB] Get:17 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libstdc++-10-dev armhf 10.2.0-16ubuntu1 [1812 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libgcc-10-dev armhf 10.2.0-16ubuntu1 [716 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf gcc-10 armhf 10.2.0-16ubuntu1 [63.7 MB] Get:20 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf cpp-10 armhf 10.2.0-16ubuntu1 [57.0 MB] Get:21 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libstdc++6 armhf 10.2.0-16ubuntu1 [441 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libmpc3 armhf 1.2.0-1 [36.1 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf-nobfd0 armhf 2.35.1-2ubuntu1 [38.7 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf0 armhf 2.35.1-2ubuntu1 [37.6 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libbinutils armhf 2.35.1-2ubuntu1 [322 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-common armhf 2.35.1-2ubuntu1 [212 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils armhf 2.35.1-2ubuntu1 [3368 B] Get:28 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.35.1-2ubuntu1 [2060 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc6 armhf 2.32-0ubuntu4 [2120 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf base-files armhf 11ubuntu16 [60.2 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncursesw6 armhf 6.2+20200918-1 [106 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncurses6 armhf 6.2+20200918-1 [79.9 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtinfo6 armhf 6.2+20200918-1 [74.2 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-bin armhf 6.2+20200918-1 [165 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libdebconfclient0 armhf 0.255ubuntu1 [5692 B] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf base-passwd armhf 3.5.48 [46.0 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libc-bin armhf 2.32-0ubuntu4 [492 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-base all 6.2+20200918-1 [18.7 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf sysvinit-utils armhf 2.96-5ubuntu1 [19.2 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd-timesyncd armhf 246.6-2ubuntu1 [27.8 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd-sysv armhf 246.6-2ubuntu1 [10.3 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main armhf libapparmor1 armhf 3.0.0-0ubuntu2 [31.1 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit-common all 1:2.8.5-3ubuntu2 [4092 B] Get:44 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit1 armhf 1:2.8.5-3ubuntu2 [36.2 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main armhf libcap2 armhf 1:2.44-1 [14.7 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main armhf libidn2-0 armhf 2.3.0-2 [49.7 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libip4tc2 armhf 1.8.5-3ubuntu3 [16.7 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main armhf libseccomp2 armhf 2.4.3-1ubuntu5 [32.6 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf systemd armhf 246.6-2ubuntu1 [3971 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libsystemd0 armhf 246.6-2ubuntu1 [247 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libudev1 armhf 246.6-2ubuntu1 [59.9 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main armhf libapt-pkg6.0 armhf 2.1.11 [773 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main armhf apt armhf 2.1.11 [1254 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main armhf libselinux1 armhf 3.1-2build1 [60.9 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage-common all 3.1-1build1 [10.1 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage1 armhf 3.1-1build1 [75.7 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main armhf tzdata all 2020d-1ubuntu1 [293 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libfakeroot armhf 1.25.3-1 [23.2 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf fakeroot armhf 1.25.3-1 [60.9 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main armhf libnpth0 armhf 1.6-3 [6980 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 203 MB in 10s (19.7 MB/s) (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt-dev:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt1:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:armhf (1:4.4.17-1ubuntu1) ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../0-libc6-dev_2.32-0ubuntu4_armhf.deb ... Unpacking libc6-dev:armhf (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Preparing to unpack .../1-libc-dev-bin_2.32-0ubuntu4_armhf.deb ... Unpacking libc-dev-bin (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Preparing to unpack .../2-linux-libc-dev_5.8.0-26.27_armhf.deb ... Unpacking linux-libc-dev:armhf (5.8.0-26.27) over (5.8.0-25.26) ... Preparing to unpack .../3-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) over (1.2.6-1build1) ... Preparing to unpack .../4-libtirpc-dev_1.2.6-3_armhf.deb ... Unpacking libtirpc-dev:armhf (1.2.6-3) over (1.2.6-1build1) ... Preparing to unpack .../5-libtirpc3_1.2.6-3_armhf.deb ... Unpacking libtirpc3:armhf (1.2.6-3) over (1.2.6-1build1) ... Preparing to unpack .../6-libcc1-0_10.2.0-16ubuntu1_armhf.deb ... Unpacking libcc1-0:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../7-gcc-10-base_10.2.0-16ubuntu1_armhf.deb ... Unpacking gcc-10-base:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Setting up gcc-10-base:armhf (10.2.0-16ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.2.0-16ubuntu1_armhf.deb ... Unpacking libgcc-s1:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Setting up libgcc-s1:armhf (10.2.0-16ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../0-libgomp1_10.2.0-16ubuntu1_armhf.deb ... Unpacking libgomp1:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../1-libatomic1_10.2.0-16ubuntu1_armhf.deb ... Unpacking libatomic1:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../2-libasan6_10.2.0-16ubuntu1_armhf.deb ... Unpacking libasan6:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../3-libubsan1_10.2.0-16ubuntu1_armhf.deb ... Unpacking libubsan1:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../4-g++-10_10.2.0-16ubuntu1_armhf.deb ... Unpacking g++-10 (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../5-libstdc++-10-dev_10.2.0-16ubuntu1_armhf.deb ... Unpacking libstdc++-10-dev:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../6-libgcc-10-dev_10.2.0-16ubuntu1_armhf.deb ... Unpacking libgcc-10-dev:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../7-gcc-10_10.2.0-16ubuntu1_armhf.deb ... Unpacking gcc-10 (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../8-cpp-10_10.2.0-16ubuntu1_armhf.deb ... Unpacking cpp-10 (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Preparing to unpack .../9-libstdc++6_10.2.0-16ubuntu1_armhf.deb ... Unpacking libstdc++6:armhf (10.2.0-16ubuntu1) over (10.2.0-13ubuntu1) ... Setting up libstdc++6:armhf (10.2.0-16ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../0-libmpc3_1.2.0-1_armhf.deb ... Unpacking libmpc3:armhf (1.2.0-1) over (1.2.0~rc1-1) ... Preparing to unpack .../1-libctf-nobfd0_2.35.1-2ubuntu1_armhf.deb ... Unpacking libctf-nobfd0:armhf (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../2-libctf0_2.35.1-2ubuntu1_armhf.deb ... Unpacking libctf0:armhf (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../3-libbinutils_2.35.1-2ubuntu1_armhf.deb ... Unpacking libbinutils:armhf (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../4-binutils-common_2.35.1-2ubuntu1_armhf.deb ... Unpacking binutils-common:armhf (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../5-binutils_2.35.1-2ubuntu1_armhf.deb ... Unpacking binutils (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../6-binutils-arm-linux-gnueabihf_2.35.1-2ubuntu1_armhf.deb ... Unpacking binutils-arm-linux-gnueabihf (2.35.1-2ubuntu1) over (2.35.1-1ubuntu1) ... Preparing to unpack .../7-libc6_2.32-0ubuntu4_armhf.deb ... Unpacking libc6:armhf (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Setting up libc6:armhf (2.32-0ubuntu4) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu16_armhf.deb ... Unpacking base-files (11ubuntu16) over (11ubuntu14) ... Setting up base-files (11ubuntu16) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.2+20200918-1_armhf.deb ... Unpacking libncursesw6:armhf (6.2+20200918-1) over (6.2-1) ... Preparing to unpack .../libncurses6_6.2+20200918-1_armhf.deb ... Unpacking libncurses6:armhf (6.2+20200918-1) over (6.2-1) ... Preparing to unpack .../libtinfo6_6.2+20200918-1_armhf.deb ... Unpacking libtinfo6:armhf (6.2+20200918-1) over (6.2-1) ... Setting up libtinfo6:armhf (6.2+20200918-1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2+20200918-1_armhf.deb ... Unpacking ncurses-bin (6.2+20200918-1) over (6.2-1) ... Setting up ncurses-bin (6.2+20200918-1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.255ubuntu1_armhf.deb ... Unpacking libdebconfclient0:armhf (0.255ubuntu1) over (0.252ubuntu1) ... Setting up libdebconfclient0:armhf (0.255ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.48_armhf.deb ... Unpacking base-passwd (3.5.48) over (3.5.47) ... Setting up base-passwd (3.5.48) ... Changing home-directory of irc from /var/run/ircd to /run/ircd 1 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libc-bin_2.32-0ubuntu4_armhf.deb ... Unpacking libc-bin (2.32-0ubuntu4) over (2.32-0ubuntu3) ... Setting up libc-bin (2.32-0ubuntu4) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20200918-1_all.deb ... Unpacking ncurses-base (6.2+20200918-1) over (6.2-1) ... Setting up ncurses-base (6.2+20200918-1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-5ubuntu1_armhf.deb ... Unpacking sysvinit-utils (2.96-5ubuntu1) over (2.96-3ubuntu1) ... Setting up sysvinit-utils (2.96-5ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../systemd-timesyncd_246.6-2ubuntu1_armhf.deb ... Unpacking systemd-timesyncd (246.6-2ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../systemd-sysv_246.6-2ubuntu1_armhf.deb ... Unpacking systemd-sysv (246.6-2ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../libapparmor1_3.0.0-0ubuntu2_armhf.deb ... Unpacking libapparmor1:armhf (3.0.0-0ubuntu2) over (3.0.0-0ubuntu1) ... Preparing to unpack .../libaudit-common_1%3a2.8.5-3ubuntu2_all.deb ... Unpacking libaudit-common (1:2.8.5-3ubuntu2) over (1:2.8.5-3ubuntu1) ... Setting up libaudit-common (1:2.8.5-3ubuntu2) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-3ubuntu2_armhf.deb ... Unpacking libaudit1:armhf (1:2.8.5-3ubuntu2) over (1:2.8.5-3ubuntu1) ... Setting up libaudit1:armhf (1:2.8.5-3ubuntu2) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.44-1_armhf.deb ... Unpacking libcap2:armhf (1:2.44-1) over (1:2.43-1) ... Preparing to unpack .../libidn2-0_2.3.0-2_armhf.deb ... Unpacking libidn2-0:armhf (2.3.0-2) over (2.3.0-1) ... Setting up libidn2-0:armhf (2.3.0-2) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libip4tc2_1.8.5-3ubuntu3_armhf.deb ... Unpacking libip4tc2:armhf (1.8.5-3ubuntu3) over (1.8.5-3ubuntu1) ... Preparing to unpack .../libseccomp2_2.4.3-1ubuntu5_armhf.deb ... Unpacking libseccomp2:armhf (2.4.3-1ubuntu5) over (2.4.3-1ubuntu4) ... Setting up libseccomp2:armhf (2.4.3-1ubuntu5) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../systemd_246.6-2ubuntu1_armhf.deb ... Unpacking systemd (246.6-2ubuntu1) over (246.6-1ubuntu1) ... Preparing to unpack .../libsystemd0_246.6-2ubuntu1_armhf.deb ... Unpacking libsystemd0:armhf (246.6-2ubuntu1) over (246.6-1ubuntu1) ... Setting up libsystemd0:armhf (246.6-2ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libudev1_246.6-2ubuntu1_armhf.deb ... Unpacking libudev1:armhf (246.6-2ubuntu1) over (246.6-1ubuntu1) ... Setting up libudev1:armhf (246.6-2ubuntu1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.11_armhf.deb ... Unpacking libapt-pkg6.0:armhf (2.1.11) over (2.1.10) ... Setting up libapt-pkg6.0:armhf (2.1.11) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.11_armhf.deb ... Unpacking apt (2.1.11) over (2.1.10) ... Setting up apt (2.1.11) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-2build1_armhf.deb ... Unpacking libselinux1:armhf (3.1-2build1) over (3.1-2) ... Setting up libselinux1:armhf (3.1-2build1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1build1_all.deb ... Unpacking libsemanage-common (3.1-1build1) over (3.1-1) ... Setting up libsemanage-common (3.1-1build1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1build1_armhf.deb ... Unpacking libsemanage1:armhf (3.1-1build1) over (3.1-1) ... Setting up libsemanage1:armhf (3.1-1build1) ... (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../tzdata_2020d-1ubuntu1_all.deb ... Unpacking tzdata (2020d-1ubuntu1) over (2020b-1ubuntu1) ... Preparing to unpack .../libfakeroot_1.25.3-1_armhf.deb ... Unpacking libfakeroot:armhf (1.25.3-1) over (1.25.2-1) ... Preparing to unpack .../fakeroot_1.25.3-1_armhf.deb ... Unpacking fakeroot (1.25.3-1) over (1.25.2-1) ... Preparing to unpack .../libnpth0_1.6-3_armhf.deb ... Unpacking libnpth0:armhf (1.6-3) over (1.6-2) ... Setting up libip4tc2:armhf (1.8.5-3ubuntu3) ... Setting up libapparmor1:armhf (3.0.0-0ubuntu2) ... Setting up libtirpc-common (1.2.6-3) ... Setting up binutils-common:armhf (2.35.1-2ubuntu1) ... Setting up linux-libc-dev:armhf (5.8.0-26.27) ... Setting up libctf-nobfd0:armhf (2.35.1-2ubuntu1) ... Setting up libnpth0:armhf (1.6-3) ... Setting up libgomp1:armhf (10.2.0-16ubuntu1) ... Setting up libcap2:armhf (1:2.44-1) ... Setting up libfakeroot:armhf (1.25.3-1) ... Setting up libasan6:armhf (10.2.0-16ubuntu1) ... Setting up tzdata (2020d-1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Nov 6 17:16:34 UTC 2020. Universal Time is now: Fri Nov 6 17:16:34 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1) ... Setting up libncurses6:armhf (6.2+20200918-1) ... Setting up libmpc3:armhf (1.2.0-1) ... Setting up libatomic1:armhf (10.2.0-16ubuntu1) ... Setting up libncursesw6:armhf (6.2+20200918-1) ... Setting up libubsan1:armhf (10.2.0-16ubuntu1) ... Setting up libcrypt-dev:armhf (1:4.4.17-1ubuntu1) ... Setting up libbinutils:armhf (2.35.1-2ubuntu1) ... Setting up libc-dev-bin (2.32-0ubuntu4) ... Setting up libcc1-0:armhf (10.2.0-16ubuntu1) ... Setting up cpp-10 (10.2.0-16ubuntu1) ... Setting up libctf0:armhf (2.35.1-2ubuntu1) ... Setting up libtirpc3:armhf (1.2.6-3) ... Setting up libgcc-10-dev:armhf (10.2.0-16ubuntu1) ... Setting up libtirpc-dev:armhf (1.2.6-3) ... Setting up libc6-dev:armhf (2.32-0ubuntu4) ... Setting up binutils-arm-linux-gnueabihf (2.35.1-2ubuntu1) ... Setting up libstdc++-10-dev:armhf (10.2.0-16ubuntu1) ... Setting up binutils (2.35.1-2ubuntu1) ... Setting up gcc-10 (10.2.0-16ubuntu1) ... Setting up g++-10 (10.2.0-16ubuntu1) ... Setting up systemd (246.6-2ubuntu1) ... Initializing machine ID from random generator. Setting up systemd-timesyncd (246.6-2ubuntu1) ... Setting up systemd-sysv (246.6-2ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu4) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20255717 armhf hirsute-proposed -c chroot:build-PACKAGEBUILD-20255717 --arch=armhf --dist=hirsute-proposed --nolog bambamc_0.0.50-4.dsc Initiating build PACKAGEBUILD-20255717 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-122-generic #124-Ubuntu SMP Thu Oct 15 13:09:19 UTC 2020 armv7l sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-058.buildd +==============================================================================+ | bambamc 0.0.50-4 (armhf) Fri, 06 Nov 2020 17:16:37 +0000 | +==============================================================================+ Package: bambamc Version: 0.0.50-4 Source Version: 0.0.50-4 Distribution: hirsute-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20255717/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- bambamc_0.0.50-4.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/bambamc-650trh/bambamc-0.0.50' with '<>' I: NOTICE: Log filtering will replace 'build/bambamc-650trh' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-IEnYJV/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-IEnYJV/apt_archive ./ InRelease Get:2 copy:/<>/resolver-IEnYJV/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-IEnYJV/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-IEnYJV/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-IEnYJV/apt_archive ./ Packages [430 B] Fetched 1736 B in 0s (44.2 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-IEnYJV/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (64.2 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-bambamc-dummy' in '/<>/resolver-IEnYJV/apt_archive/sbuild-build-depends-bambamc-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-bambamc-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-IEnYJV/apt_archive ./ InRelease Get:2 copy:/<>/resolver-IEnYJV/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-IEnYJV/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-IEnYJV/apt_archive ./ Sources [514 B] Get:5 copy:/<>/resolver-IEnYJV/apt_archive ./ Packages [592 B] Fetched 2069 B in 0s (53.4 kB/s) Reading package lists... Reading package lists... Install bambamc build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-bambamc-dummy zlib1g-dev 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 16.6 MB of archives. After this operation, 61.9 MB of additional disk space will be used. Get:1 copy:/<>/resolver-IEnYJV/apt_archive ./ sbuild-build-depends-bambamc-dummy 0.invalid.0 [888 B] Get:2 http://ftpmaster.internal/ubuntu hirsute/main armhf bsdextrautils armhf 2.36-3ubuntu1 [70.6 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main armhf groff-base armhf 1.22.4-5 [759 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf libpipeline1 armhf 1.5.3-1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main armhf man-db armhf 2.9.3-2 [1082 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic-mgc armhf 1:5.38-5 [218 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic1 armhf 1:5.38-5 [68.4 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main armhf file armhf 1:5.38-5 [22.4 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main armhf libelf1 armhf 0.181-1 [39.5 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libglib2.0-0 armhf 2.66.2-1 [1139 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main armhf libicu67 armhf 67.1-4 [8304 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libxml2 armhf 2.9.10+dfsg-6.2 [530 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext-base armhf 0.19.8.1-10build1 [46.0 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main armhf libsigsegv2 armhf 2.12-2build1 [13.0 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main armhf m4 armhf 1.4.18-4 [187 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main armhf autoconf all 2.69-11.1 [321 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main armhf automake all 1:1.16.2-4ubuntu1 [548 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main armhf autopoint all 0.19.8.1-10build1 [412 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/universe armhf d-shlibs all 0.95 [9664 B] Get:22 http://ftpmaster.internal/ubuntu hirsute/main armhf libtool all 2.4.6-14 [161 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-autoreconf all 19 [16.1 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main armhf libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:27 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:29 http://ftpmaster.internal/ubuntu hirsute/main armhf dwz armhf 0.13-5 [153 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf libcroco3 armhf 0.6.13-1 [70.5 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext armhf 0.19.8.1-10build1 [835 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main armhf po-debconf all 1.0.21 [233 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main armhf debhelper all 13.2.1ubuntu1 [879 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main armhf pkg-config armhf 0.29.2-1ubuntu1 [43.4 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2ubuntu4 [149 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.6 MB in 1s (17.1 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-3ubuntu1_armhf.deb ... Unpacking bsdextrautils (2.36-3ubuntu1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_armhf.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_armhf.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.38-5_armhf.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../06-libmagic1_1%3a5.38-5_armhf.deb ... Unpacking libmagic1:armhf (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../07-file_1%3a5.38-5_armhf.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../08-libelf1_0.181-1_armhf.deb ... Unpacking libelf1:armhf (0.181-1) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../09-libglib2.0-0_2.66.2-1_armhf.deb ... Unpacking libglib2.0-0:armhf (2.66.2-1) ... Selecting previously unselected package libicu67:armhf. Preparing to unpack .../10-libicu67_67.1-4_armhf.deb ... Unpacking libicu67:armhf (67.1-4) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../11-libxml2_2.9.10+dfsg-6.2_armhf.deb ... Unpacking libxml2:armhf (2.9.10+dfsg-6.2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.19.8.1-10build1_armhf.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../13-libsigsegv2_2.12-2build1_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2build1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-4_armhf.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../16-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../17-automake_1%3a1.16.2-4ubuntu1_all.deb ... Unpacking automake (1:1.16.2-4ubuntu1) ... Selecting previously unselected package autopoint. Preparing to unpack .../18-autopoint_0.19.8.1-10build1_all.deb ... Unpacking autopoint (0.19.8.1-10build1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../19-d-shlibs_0.95_all.deb ... Unpacking d-shlibs (0.95) ... Selecting previously unselected package libtool. Preparing to unpack .../20-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../21-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13.2.1ubuntu1_all.deb ... Unpacking libdebhelper-perl (13.2.1ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../23-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../24-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../25-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../26-dh-strip-nondeterminism_1.9.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.9.0-1) ... Selecting previously unselected package dwz. Preparing to unpack .../27-dwz_0.13-5_armhf.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libcroco3:armhf. Preparing to unpack .../28-libcroco3_0.6.13-1_armhf.deb ... Unpacking libcroco3:armhf (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../29-gettext_0.19.8.1-10build1_armhf.deb ... Unpacking gettext (0.19.8.1-10build1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../30-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../31-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../32-debhelper_13.2.1ubuntu1_all.deb ... Unpacking debhelper (13.2.1ubuntu1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../33-pkg-config_0.29.2-1ubuntu1_armhf.deb ... Unpacking pkg-config (0.29.2-1ubuntu1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../34-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu4_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2ubuntu4) ... Selecting previously unselected package sbuild-build-depends-bambamc-dummy. Preparing to unpack .../35-sbuild-build-depends-bambamc-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-bambamc-dummy (0.invalid.0) ... Setting up libpipeline1:armhf (1.5.3-1) ... Setting up bsdextrautils (2.36-3ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:armhf (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.2.1ubuntu1) ... Setting up libmagic1:armhf (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:armhf (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up pkg-config (0.29.2-1ubuntu1) ... Setting up d-shlibs (0.95) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2ubuntu4) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:armhf (0.181-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.2) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up libcroco3:armhf (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.2-4ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (13.2.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-bambamc-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu4) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-122-generic arm64 (armv7l) Toolchain package versions: binutils_2.35.1-2ubuntu1 dpkg-dev_1.20.5ubuntu2 g++-10_10.2.0-16ubuntu1 gcc-10_10.2.0-16ubuntu1 libc6-dev_2.32-0ubuntu4 libstdc++-10-dev_10.2.0-16ubuntu1 libstdc++6_10.2.0-16ubuntu1 linux-libc-dev_5.8.0-26.27 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.0-6ubuntu2 binutils_2.35.1-2ubuntu1 binutils-arm-linux-gnueabihf_2.35.1-2ubuntu1 binutils-common_2.35.1-2ubuntu1 bsdextrautils_2.36-3ubuntu1 bsdutils_1:2.36-3ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.32-3ubuntu1 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.0-16ubuntu1 d-shlibs_0.95 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3ubuntu1 dpkg_1.20.5ubuntu2 dpkg-dev_1.20.5ubuntu2 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1 file_1:5.38-5 findutils_4.7.0-1ubuntu2 g++_4:10.2.0-1ubuntu1 g++-10_10.2.0-16ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.0-16ubuntu1 gcc-10-base_10.2.0-16ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_3.0.0-0ubuntu2 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-16ubuntu1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-16ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu2 libaudit1_1:2.8.5-3ubuntu2 libbinutils_2.35.1-2ubuntu1 libblkid1_2.36-3ubuntu1 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.32-0ubuntu4 libc-dev-bin_2.32-0ubuntu4 libc6_2.32-0ubuntu4 libc6-dev_2.32-0ubuntu4 libcap-ng0_0.7.9-2.2 libcap2_1:2.44-1 libcc1-0_10.2.0-16ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1ubuntu1 libcrypt1_1:4.4.17-1ubuntu1 libcryptsetup12_2:2.3.3-1ubuntu6 libctf-nobfd0_2.35.1-2ubuntu1 libctf0_2.35.1-2ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.255ubuntu1 libdebhelper-perl_13.2.1ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.20.5ubuntu2 libelf1_0.181-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-16ubuntu1 libgcc-s1_10.2.0-16ubuntu1 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.2-1 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.0-16ubuntu1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-2 libip4tc2_1.8.5-3ubuntu3 libisl22_0.22.1-1 libjson-c5_0.15-1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-3_1.17-10 libkrb5support0_1.17-10 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3ubuntu1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libp11-kit0_0.23.21-2build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libprocps8_2:3.3.16-5ubuntu2 libreadline8_8.0-4 libseccomp2_2.4.3-1ubuntu5 libselinux1_3.1-2build1 libsemanage-common_3.1-1build1 libsemanage1_3.1-1build1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36-3ubuntu1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu4 libstdc++-10-dev_10.2.0-16ubuntu1 libstdc++6_10.2.0-16ubuntu1 libsub-override-perl_0.09-2 libsystemd0_246.6-2ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-16ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-2ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36-3ubuntu1 libxml2_2.9.10+dfsg-6.2 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-26.27 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3ubuntu1 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 openssl_1.1.1f-1ubuntu4 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 readline-common_8.0-4 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-bambamc-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 systemd_246.6-2ubuntu1 systemd-sysv_246.6-2ubuntu1 systemd-timesyncd_246.6-2ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.30+dfsg-7 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.36-3ubuntu1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Nov 6 13:23:11 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bambamc_0.0.50-4.dsc dpkg-source: info: extracting bambamc in /<> dpkg-source: info: unpacking bambamc_0.0.50.orig.tar.gz dpkg-source: info: unpacking bambamc_0.0.50-4.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20255717 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20255717 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20255717 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package bambamc dpkg-buildpackage: info: source version 0.0.50-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:4: installing './compile' configure.in:3: installing './config.guess' configure.in:3: installing './config.sub' configure.in:7: installing './install-sh' configure.in:7: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationHash.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollatorInterface.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_FormatAlignment.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationHashEntry.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_FormatNumber.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationOutputVector.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamHeaderInfo.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_Hash.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationTempFileGenerator.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamWriter.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_List.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationVector.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_CharBuffer.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_ListNode.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollator.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_Chromosome.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipReader.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_LineParsing.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamFileHeader.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamAlignmentPut.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamSingleAlignment.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipWriter.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BgzfCompressor.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_LineBuffer.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamInfo.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamBamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_StrDup.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:40: warning: source file 'test/bamreadertest.c' is in a subdirectory, src/Makefile.am:40: but option 'subdir-objects' is disabled src/Makefile.am:44: warning: source file 'test/bamwritertest.c' is in a subdirectory, src/Makefile.am:44: but option 'subdir-objects' is disabled src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking target system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of gcc... none checking for gcc option to accept ISO C99... none needed checking for ANSI C header files... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for zlib >= 0... yes checking for zlib >= 0... yes checking whether we can compile a zlib program... yes checking for _mkdir... no checking direct.h usability... no checking direct.h presence... no checking for direct.h... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating ubuntu.sh config.status: creating bambamc.pc config.status: creating src/bambamc/BamBam_Config.h config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands dh_auto_build -a make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o bamreadertest-bamreadertest.o `test -f 'test/bamreadertest.c' || echo './'`test/bamreadertest.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationHash.lo `test -f 'bambamc/BamBam_BamCollationHash.c' || echo './'`bambamc/BamBam_BamCollationHash.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollatorInterface.lo `test -f 'bambamc/BamBam_BamCollatorInterface.c' || echo './'`bambamc/BamBam_BamCollatorInterface.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_FormatAlignment.lo `test -f 'bambamc/BamBam_FormatAlignment.c' || echo './'`bambamc/BamBam_FormatAlignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHash.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationHash.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollatorInterface.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollatorInterface.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatAlignment.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_FormatAlignment.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHash.c -o libbambamc_la-BamBam_BamCollationHash.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationHashEntry.lo `test -f 'bambamc/BamBam_BamCollationHashEntry.c' || echo './'`bambamc/BamBam_BamCollationHashEntry.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHashEntry.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationHashEntry.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_FormatNumber.lo `test -f 'bambamc/BamBam_FormatNumber.c' || echo './'`bambamc/BamBam_FormatNumber.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatAlignment.c -o libbambamc_la-BamBam_FormatAlignment.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatNumber.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_FormatNumber.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHashEntry.c -o libbambamc_la-BamBam_BamCollationHashEntry.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollatorInterface.c -o libbambamc_la-BamBam_BamCollatorInterface.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatNumber.c -o libbambamc_la-BamBam_FormatNumber.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationOutputVector.lo `test -f 'bambamc/BamBam_BamCollationOutputVector.c' || echo './'`bambamc/BamBam_BamCollationOutputVector.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationOutputVector.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationOutputVector.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamHeaderInfo.lo `test -f 'bambamc/BamBam_BamHeaderInfo.c' || echo './'`bambamc/BamBam_BamHeaderInfo.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_Hash.lo `test -f 'bambamc/BamBam_Hash.c' || echo './'`bambamc/BamBam_Hash.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamHeaderInfo.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamHeaderInfo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Hash.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_Hash.o bambamc/BamBam_Hash.c: In function ‘hash’: bambamc/BamBam_Hash.c:83:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 83 | case 11: c+=((uint32_t)k[10]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:84:3: note: here 84 | case 10: c+=((uint32_t)k[9]<<16); | ^~~~ bambamc/BamBam_Hash.c:84:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 84 | case 10: c+=((uint32_t)k[9]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:85:3: note: here 85 | case 9 : c+=((uint32_t)k[8]<<8); | ^~~~ bambamc/BamBam_Hash.c:85:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 85 | case 9 : c+=((uint32_t)k[8]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:87:3: note: here 87 | case 8 : b+=((uint32_t)k[7]<<24); | ^~~~ bambamc/BamBam_Hash.c:87:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 87 | case 8 : b+=((uint32_t)k[7]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:88:3: note: here 88 | case 7 : b+=((uint32_t)k[6]<<16); | ^~~~ bambamc/BamBam_Hash.c:88:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 88 | case 7 : b+=((uint32_t)k[6]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:89:3: note: here 89 | case 6 : b+=((uint32_t)k[5]<<8); | ^~~~ bambamc/BamBam_Hash.c:89:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 89 | case 6 : b+=((uint32_t)k[5]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:90:3: note: here 90 | case 5 : b+=k[4]; | ^~~~ bambamc/BamBam_Hash.c:90:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 90 | case 5 : b+=k[4]; | ~^~~~~~ bambamc/BamBam_Hash.c:91:3: note: here 91 | case 4 : a+=((uint32_t)k[3]<<24); | ^~~~ bambamc/BamBam_Hash.c:91:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 91 | case 4 : a+=((uint32_t)k[3]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:92:3: note: here 92 | case 3 : a+=((uint32_t)k[2]<<16); | ^~~~ bambamc/BamBam_Hash.c:92:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 92 | case 3 : a+=((uint32_t)k[2]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:93:3: note: here 93 | case 2 : a+=((uint32_t)k[1]<<8); | ^~~~ bambamc/BamBam_Hash.c:93:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 93 | case 2 : a+=((uint32_t)k[1]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:94:3: note: here 94 | case 1 : a+=k[0]; | ^~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationOutputVector.c -o libbambamc_la-BamBam_BamCollationOutputVector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationTempFileGenerator.lo `test -f 'bambamc/BamBam_BamCollationTempFileGenerator.c' || echo './'`bambamc/BamBam_BamCollationTempFileGenerator.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Hash.c -o libbambamc_la-BamBam_Hash.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationTempFileGenerator.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationTempFileGenerator.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamWriter.lo `test -f 'bambamc/BamBam_BamWriter.c' || echo './'`bambamc/BamBam_BamWriter.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_List.lo `test -f 'bambamc/BamBam_List.c' || echo './'`bambamc/BamBam_List.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamWriter.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamWriter.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_List.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_List.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamHeaderInfo.c -o libbambamc_la-BamBam_BamHeaderInfo.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationTempFileGenerator.c -o libbambamc_la-BamBam_BamCollationTempFileGenerator.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_List.c -o libbambamc_la-BamBam_List.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamWriter.c -o libbambamc_la-BamBam_BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationVector.lo `test -f 'bambamc/BamBam_BamCollationVector.c' || echo './'`bambamc/BamBam_BamCollationVector.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_CharBuffer.lo `test -f 'bambamc/BamBam_CharBuffer.c' || echo './'`bambamc/BamBam_CharBuffer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationVector.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationVector.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_ListNode.lo `test -f 'bambamc/BamBam_ListNode.c' || echo './'`bambamc/BamBam_ListNode.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_CharBuffer.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_CharBuffer.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_ListNode.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_ListNode.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_CharBuffer.c -o libbambamc_la-BamBam_CharBuffer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollator.lo `test -f 'bambamc/BamBam_BamCollator.c' || echo './'`bambamc/BamBam_BamCollator.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_ListNode.c -o libbambamc_la-BamBam_ListNode.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollator.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollator.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationVector.c -o libbambamc_la-BamBam_BamCollationVector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_Chromosome.lo `test -f 'bambamc/BamBam_Chromosome.c' || echo './'`bambamc/BamBam_Chromosome.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Chromosome.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_Chromosome.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipReader.lo `test -f 'bambamc/BamBam_GzipReader.c' || echo './'`bambamc/BamBam_GzipReader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipReader.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipReader.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Chromosome.c -o libbambamc_la-BamBam_Chromosome.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_LineParsing.lo `test -f 'bambamc/BamBam_LineParsing.c' || echo './'`bambamc/BamBam_LineParsing.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamFileHeader.lo `test -f 'bambamc/BamBam_BamFileHeader.c' || echo './'`bambamc/BamBam_BamFileHeader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineParsing.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_LineParsing.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileHeader.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamFileHeader.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipReader.c -o libbambamc_la-BamBam_GzipReader.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineParsing.c -o libbambamc_la-BamBam_LineParsing.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamAlignmentPut.lo `test -f 'bambamc/BamBam_BamAlignmentPut.c' || echo './'`bambamc/BamBam_BamAlignmentPut.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamAlignmentPut.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamAlignmentPut.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamSingleAlignment.lo `test -f 'bambamc/BamBam_BamSingleAlignment.c' || echo './'`bambamc/BamBam_BamSingleAlignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamSingleAlignment.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamSingleAlignment.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollator.c -o libbambamc_la-BamBam_BamCollator.o >/dev/null 2>&1 bambamc/BamBam_BamSingleAlignment.c: In function ‘BamBam_BamSingleAlignment_LoadAlignment’: bambamc/BamBam_BamSingleAlignment.c:882:34: warning: array subscript has type ‘char’ [-Wchar-subscripts] 882 | if ( ! bambamc_qnameValidTable[*cc] ) | ^~~ bambamc/BamBam_BamSingleAlignment.c:898:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 898 | if ( (cc-ca)+1 != BamBam_BamSingleAlignment_GetNL(data) ) | ^~ bambamc/BamBam_BamSingleAlignment.c:910:58: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 910 | if ( ue-BamBam_BamSingleAlignment_GetEncodedCigar(data) < BamBam_BamSingleAlignment_GetNC(data)*sizeof(uint32_t) ) | ^ bambamc/BamBam_BamSingleAlignment.c:957:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 957 | if ( ciglen != BamBam_BamSingleAlignment_GetLSeq(data) ) | ^~ bambamc/BamBam_BamSingleAlignment.c:1089:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 1089 | if ( (ue-auxc) < (3+1+4+ 1*alen) ) | ^ bambamc/BamBam_BamSingleAlignment.c:1098:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 1098 | if ( (ue-auxc) < (3+1+4+ 2*alen) ) | ^ bambamc/BamBam_BamSingleAlignment.c:1108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 1108 | if ( (ue-auxc) < (3+1+4+ 4*alen) ) | ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileHeader.c -o libbambamc_la-BamBam_BamFileHeader.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamAlignmentPut.c -o libbambamc_la-BamBam_BamAlignmentPut.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamFileDecoder.lo `test -f 'bambamc/BamBam_BamFileDecoder.c' || echo './'`bambamc/BamBam_BamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileDecoder.c -o libbambamc_la-BamBam_BamFileDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipWriter.lo `test -f 'bambamc/BamBam_GzipWriter.c' || echo './'`bambamc/BamBam_GzipWriter.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipWriter.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipWriter.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipWriter.c -o libbambamc_la-BamBam_GzipWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipFileDecoder.lo `test -f 'bambamc/BamBam_GzipFileDecoder.c' || echo './'`bambamc/BamBam_GzipFileDecoder.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BgzfCompressor.lo `test -f 'bambamc/BamBam_BgzfCompressor.c' || echo './'`bambamc/BamBam_BgzfCompressor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BgzfCompressor.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BgzfCompressor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipFileDecoder.c -o libbambamc_la-BamBam_GzipFileDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_LineBuffer.lo `test -f 'bambamc/BamBam_LineBuffer.c' || echo './'`bambamc/BamBam_LineBuffer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineBuffer.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_LineBuffer.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamInfo.lo `test -f 'bambamc/BamBam_SamInfo.c' || echo './'`bambamc/BamBam_SamInfo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamSingleAlignment.c -o libbambamc_la-BamBam_BamSingleAlignment.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamInfo.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamInfo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BgzfCompressor.c -o libbambamc_la-BamBam_BgzfCompressor.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineBuffer.c -o libbambamc_la-BamBam_LineBuffer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamFileDecoder.lo `test -f 'bambamc/BamBam_SamFileDecoder.c' || echo './'`bambamc/BamBam_SamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamFileDecoder.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamBamFileDecoder.lo `test -f 'bambamc/BamBam_SamBamFileDecoder.c' || echo './'`bambamc/BamBam_SamBamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamBamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamBamFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamFileDecoder.c -o libbambamc_la-BamBam_SamFileDecoder.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamBamFileDecoder.c -o libbambamc_la-BamBam_SamBamFileDecoder.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamInfo.c -o libbambamc_la-BamBam_SamInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_StrDup.lo `test -f 'bambamc/BamBam_StrDup.c' || echo './'`bambamc/BamBam_StrDup.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_StrDup.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_StrDup.o gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o bamwritertest-bamwritertest.o `test -f 'test/bamwritertest.c' || echo './'`test/bamwritertest.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_StrDup.c -o libbambamc_la-BamBam_StrDup.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -version-info 0:50:0 -Wl,-Bsymbolic-functions -Wl,-z,relro -o libbambamc.la -rpath /usr/lib/arm-linux-gnueabihf libbambamc_la-BamBam_BamCollationHash.lo libbambamc_la-BamBam_BamCollatorInterface.lo libbambamc_la-BamBam_FormatAlignment.lo libbambamc_la-BamBam_BamCollationHashEntry.lo libbambamc_la-BamBam_FormatNumber.lo libbambamc_la-BamBam_BamCollationOutputVector.lo libbambamc_la-BamBam_BamHeaderInfo.lo libbambamc_la-BamBam_Hash.lo libbambamc_la-BamBam_BamCollationTempFileGenerator.lo libbambamc_la-BamBam_BamWriter.lo libbambamc_la-BamBam_List.lo libbambamc_la-BamBam_BamCollationVector.lo libbambamc_la-BamBam_CharBuffer.lo libbambamc_la-BamBam_ListNode.lo libbambamc_la-BamBam_BamCollator.lo libbambamc_la-BamBam_Chromosome.lo libbambamc_la-BamBam_GzipReader.lo libbambamc_la-BamBam_LineParsing.lo libbambamc_la-BamBam_BamFileHeader.lo libbambamc_la-BamBam_BamAlignmentPut.lo libbambamc_la-BamBam_BamSingleAlignment.lo libbambamc_la-BamBam_BamFileDecoder.lo libbambamc_la-BamBam_GzipWriter.lo libbambamc_la-BamBam_GzipFileDecoder.lo libbambamc_la-BamBam_BgzfCompressor.lo libbambamc_la-BamBam_LineBuffer.lo libbambamc_la-BamBam_SamInfo.lo libbambamc_la-BamBam_SamFileDecoder.lo libbambamc_la-BamBam_SamBamFileDecoder.lo libbambamc_la-BamBam_StrDup.lo -lz libtool: link: gcc -shared -fPIC -DPIC .libs/libbambamc_la-BamBam_BamCollationHash.o .libs/libbambamc_la-BamBam_BamCollatorInterface.o .libs/libbambamc_la-BamBam_FormatAlignment.o .libs/libbambamc_la-BamBam_BamCollationHashEntry.o .libs/libbambamc_la-BamBam_FormatNumber.o .libs/libbambamc_la-BamBam_BamCollationOutputVector.o .libs/libbambamc_la-BamBam_BamHeaderInfo.o .libs/libbambamc_la-BamBam_Hash.o .libs/libbambamc_la-BamBam_BamCollationTempFileGenerator.o .libs/libbambamc_la-BamBam_BamWriter.o .libs/libbambamc_la-BamBam_List.o .libs/libbambamc_la-BamBam_BamCollationVector.o .libs/libbambamc_la-BamBam_CharBuffer.o .libs/libbambamc_la-BamBam_ListNode.o .libs/libbambamc_la-BamBam_BamCollator.o .libs/libbambamc_la-BamBam_Chromosome.o .libs/libbambamc_la-BamBam_GzipReader.o .libs/libbambamc_la-BamBam_LineParsing.o .libs/libbambamc_la-BamBam_BamFileHeader.o .libs/libbambamc_la-BamBam_BamAlignmentPut.o .libs/libbambamc_la-BamBam_BamSingleAlignment.o .libs/libbambamc_la-BamBam_BamFileDecoder.o .libs/libbambamc_la-BamBam_GzipWriter.o .libs/libbambamc_la-BamBam_GzipFileDecoder.o .libs/libbambamc_la-BamBam_BgzfCompressor.o .libs/libbambamc_la-BamBam_LineBuffer.o .libs/libbambamc_la-BamBam_SamInfo.o .libs/libbambamc_la-BamBam_SamFileDecoder.o .libs/libbambamc_la-BamBam_SamBamFileDecoder.o .libs/libbambamc_la-BamBam_StrDup.o -lz -g -O2 -fstack-protector-strong -O3 -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-soname -Wl,libbambamc.so.0 -o .libs/libbambamc.so.0.0.50 libtool: link: (cd ".libs" && rm -f "libbambamc.so.0" && ln -s "libbambamc.so.0.0.50" "libbambamc.so.0") libtool: link: (cd ".libs" && rm -f "libbambamc.so" && ln -s "libbambamc.so.0.0.50" "libbambamc.so") libtool: link: ar cr .libs/libbambamc.a libbambamc_la-BamBam_BamCollationHash.o libbambamc_la-BamBam_BamCollatorInterface.o libbambamc_la-BamBam_FormatAlignment.o libbambamc_la-BamBam_BamCollationHashEntry.o libbambamc_la-BamBam_FormatNumber.o libbambamc_la-BamBam_BamCollationOutputVector.o libbambamc_la-BamBam_BamHeaderInfo.o libbambamc_la-BamBam_Hash.o libbambamc_la-BamBam_BamCollationTempFileGenerator.o libbambamc_la-BamBam_BamWriter.o libbambamc_la-BamBam_List.o libbambamc_la-BamBam_BamCollationVector.o libbambamc_la-BamBam_CharBuffer.o libbambamc_la-BamBam_ListNode.o libbambamc_la-BamBam_BamCollator.o libbambamc_la-BamBam_Chromosome.o libbambamc_la-BamBam_GzipReader.o libbambamc_la-BamBam_LineParsing.o libbambamc_la-BamBam_BamFileHeader.o libbambamc_la-BamBam_BamAlignmentPut.o libbambamc_la-BamBam_BamSingleAlignment.o libbambamc_la-BamBam_BamFileDecoder.o libbambamc_la-BamBam_GzipWriter.o libbambamc_la-BamBam_GzipFileDecoder.o libbambamc_la-BamBam_BgzfCompressor.o libbambamc_la-BamBam_LineBuffer.o libbambamc_la-BamBam_SamInfo.o libbambamc_la-BamBam_SamFileDecoder.o libbambamc_la-BamBam_SamBamFileDecoder.o libbambamc_la-BamBam_StrDup.o libtool: link: ranlib .libs/libbambamc.a libtool: link: ( cd ".libs" && rm -f "libbambamc.la" && ln -s "../libbambamc.la" "libbambamc.la" ) /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -o bamreadertest bamreadertest-bamreadertest.o libbambamc.la -lz /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -o bamwritertest bamwritertest-bamwritertest.o libbambamc.la -lz libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/bamreadertest bamreadertest-bamreadertest.o ./.libs/libbambamc.so -lz libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -o .libs/bamwritertest bamwritertest-bamwritertest.o ./.libs/libbambamc.so -lz make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c libbambamc.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libbambamc.so.0.0.50 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.so.0.0.50 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libbambamc.so.0.0.50 libbambamc.so.0 || { rm -f libbambamc.so.0 && ln -s libbambamc.so.0.0.50 libbambamc.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libbambamc.so.0.0.50 libbambamc.so || { rm -f libbambamc.so && ln -s libbambamc.so.0.0.50 libbambamc.so; }; }) libtool: install: /usr/bin/install -c .libs/libbambamc.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.la libtool: install: /usr/bin/install -c .libs/libbambamc.a /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.a libtool: install: ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/<>/debian/tmp/usr/include/bambamc' /usr/bin/install -c -m 644 bambamc/BamBam_BamAlignmentPut.h bambamc/BamBam_BamFlagBase.h bambamc/BamBam_FormatAlignment.h bambamc/BamBam_BamCollationHashEntry.h bambamc/BamBam_FormatNumber.h bambamc/BamBam_BamCollationHash.h bambamc/BamBam_BamHeaderInfo.h bambamc/BamBam_GzipReader.h bambamc/BamBam_BamCollationOutputVector.h bambamc/BamBam_BamSingleAlignment.h bambamc/BamBam_Hash.h bambamc/BamBam_BamCollationTempFileGenerator.h bambamc/BamBam_LineParsing.h bambamc/BamBam_BamCollationVector.h bambamc/BamBam_BamWriter.h bambamc/BamBam_List.h bambamc/BamBam_BamCollator.h bambamc/BamBam_CharBuffer.h bambamc/BamBam_ListNode.h bambamc/BamBam_BamCollatorInterface.h bambamc/BamBam_Chromosome.h bambamc/BamBam_MergeHeapEntry.h bambamc/BamBam_BamFileDecoder.h bambamc/BamBam_CollatorState.h bambamc/BamBam_Unused.h bambamc/BamBam_BamFileHeader.h bambamc/BamBam_FastQRead.h bambamc/BamBam_Config.h bambamc/BamBam_GzipWriter.h bambamc/BamBam_GzipFileDecoder.h bambamc/BamBam_BgzfCompressor.h bambamc/BamBam_LineBuffer.h bambamc/BamBam_SamInfo.h bambamc/BamBam_SamFileDecoder.h bambamc/BamBam_SamBamFileDecoder.h bambamc/BamBam_StrDup.h '/<>/debian/tmp/usr/include/bambamc' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' /usr/bin/install -c -m 644 bambamc.pc '/<>/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/lib*.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libbambamc-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libbambamc0/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.a debian/libbambamc-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.so debian/libbambamc-dev/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.so.0 debian/libbambamc0/usr/lib/arm-linux-gnueabihf mv /<>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbambamc.so.0.0.50 debian/libbambamc0/usr/lib/arm-linux-gnueabihf PKGDEV=libbambamc-dev PKGSHL=libbambamc0 install -d -m 755 debian/libbambamc-dev/usr/include mv debian/tmp/usr/include/bambamc debian/libbambamc-dev/usr/include find debian -name "lib*.la" -delete dh_install make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libbambamc-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libbambamc-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing libbambamc0 (in debian/libbambamc0); do_strip: , oemstrip: pkgstriptranslations: processing libbambamc-dev (in debian/libbambamc-dev); do_strip: , oemstrip: pkgstriptranslations: processing libbambamc0-dbgsym (in debian/.debhelper/libbambamc0/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libbambamc0/dbgsym-root/DEBIAN/control, package libbambamc0-dbgsym, directory debian/.debhelper/libbambamc0/dbgsym-root pkgstripfiles: processing control file: debian/libbambamc0/DEBIAN/control, package libbambamc0, directory debian/libbambamc0 dpkg-deb: building package 'libbambamc0-dbgsym' in 'debian/.debhelper/scratch-space/build-libbambamc0/libbambamc0-dbgsym_0.0.50-4_armhf.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbambamc0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbambamc0' in '../libbambamc0_0.0.50-4_armhf.deb'. Renaming libbambamc0-dbgsym_0.0.50-4_armhf.deb to libbambamc0-dbgsym_0.0.50-4_armhf.ddeb pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbambamc-dev/DEBIAN/control, package libbambamc-dev, directory debian/libbambamc-dev Searching for duplicated docs in dependency libbambamc0... symlinking changelog.Debian.gz in libbambamc-dev to file in libbambamc0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbambamc-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbambamc-dev' in '../libbambamc-dev_0.0.50-4_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../bambamc_0.0.50-4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-11-06T17:18:02Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bambamc_0.0.50-4_armhf.changes: ------------------------------- Format: 1.8 Date: Fri, 06 Nov 2020 14:18:02 +0100 Source: bambamc Binary: libbambamc-dev libbambamc0 Architecture: armhf Version: 0.0.50-4 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: libbambamc-dev - Development files for reading and writing BAM (genome alignment) libbambamc0 - Runtime library for reading and writing BAM (genome alignment) fi Changes: bambamc (0.0.50-4) unstable; urgency=medium . * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Remove *.la file do make sure dh_missing will not stumble upon it Checksums-Sha1: a432013c75ce373dddb46093a8cb23ec13961024 6195 bambamc_0.0.50-4_armhf.buildinfo 24a46423e5f09ad607f98d3132442b80308e98d8 42408 libbambamc-dev_0.0.50-4_armhf.deb d2aa97b8797ae02f303a72454b024b86c2e17b52 101820 libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 6c9048b26b98c617277092f974b592db2421808e 29996 libbambamc0_0.0.50-4_armhf.deb Checksums-Sha256: 385d6afe3e8c595bda4e7060b14133dc142d34d09114d51b3043efcba399c7f1 6195 bambamc_0.0.50-4_armhf.buildinfo 45dd55aad8a603c7d5ea9c6428d3721b17863592a8f8bc0f71234fbf85c88f7d 42408 libbambamc-dev_0.0.50-4_armhf.deb 74e76b146cc772367b94482aa511441365ec534c334d7ea47c3995f0b506c51d 101820 libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 514da9068eb83fe04d9c3cab578484220aa94cf6f38e06991abee511a2fb96be 29996 libbambamc0_0.0.50-4_armhf.deb Files: b7e477a84c4f95e734840f56c2073a35 6195 science optional bambamc_0.0.50-4_armhf.buildinfo 666a87140bd21c87e537766f539f8718 42408 libdevel optional libbambamc-dev_0.0.50-4_armhf.deb bf12315c2c0adfb97bd7ab9db51101d6 101820 debug optional libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 3638571ccd2cf33e7d8174ff3d85d6bd 29996 libs optional libbambamc0_0.0.50-4_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: bambamc Binary: libbambamc-dev libbambamc0 libbambamc0-dbgsym Architecture: armhf Version: 0.0.50-4 Checksums-Md5: 666a87140bd21c87e537766f539f8718 42408 libbambamc-dev_0.0.50-4_armhf.deb bf12315c2c0adfb97bd7ab9db51101d6 101820 libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 3638571ccd2cf33e7d8174ff3d85d6bd 29996 libbambamc0_0.0.50-4_armhf.deb Checksums-Sha1: 24a46423e5f09ad607f98d3132442b80308e98d8 42408 libbambamc-dev_0.0.50-4_armhf.deb d2aa97b8797ae02f303a72454b024b86c2e17b52 101820 libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 6c9048b26b98c617277092f974b592db2421808e 29996 libbambamc0_0.0.50-4_armhf.deb Checksums-Sha256: 45dd55aad8a603c7d5ea9c6428d3721b17863592a8f8bc0f71234fbf85c88f7d 42408 libbambamc-dev_0.0.50-4_armhf.deb 74e76b146cc772367b94482aa511441365ec534c334d7ea47c3995f0b506c51d 101820 libbambamc0-dbgsym_0.0.50-4_armhf.ddeb 514da9068eb83fe04d9c3cab578484220aa94cf6f38e06991abee511a2fb96be 29996 libbambamc0_0.0.50-4_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Fri, 06 Nov 2020 17:18:01 +0000 Build-Path: /<> Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: adduser (= 3.118ubuntu2), apt (= 2.1.11), autoconf (= 2.69-11.1), automake (= 1:1.16.2-4ubuntu1), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.0-6ubuntu2), binutils (= 2.35.1-2ubuntu1), binutils-arm-linux-gnueabihf (= 2.35.1-2ubuntu1), binutils-common (= 2.35.1-2ubuntu1), bsdextrautils (= 2.36-3ubuntu1), bsdutils (= 1:2.36-3ubuntu1), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), coreutils (= 8.32-3ubuntu1), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.0-16ubuntu1), d-shlibs (= 0.95), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.5ubuntu2), dpkg-dev (= 1.20.5ubuntu2), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1ubuntu2), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.0-16ubuntu1), gcc (= 4:10.2.0-1ubuntu1), gcc-10 (= 10.2.0-16ubuntu1), gcc-10-base (= 10.2.0-16ubuntu1), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), gpgv (= 2.2.20-1ubuntu1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.11), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-16ubuntu1), libatomic1 (= 10.2.0-16ubuntu1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3ubuntu2), libaudit1 (= 1:2.8.5-3ubuntu2), libbinutils (= 2.35.1-2ubuntu1), libblkid1 (= 2.36-3ubuntu1), libbz2-1.0 (= 1.0.8-4ubuntu2), libc-bin (= 2.32-0ubuntu4), libc-dev-bin (= 2.32-0ubuntu4), libc6 (= 2.32-0ubuntu4), libc6-dev (= 2.32-0ubuntu4), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-16ubuntu1), libcom-err2 (= 1.45.6-1ubuntu1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1ubuntu1), libcrypt1 (= 1:4.4.17-1ubuntu1), libctf-nobfd0 (= 2.35.1-2ubuntu1), libctf0 (= 2.35.1-2ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu3), libdebconfclient0 (= 0.255ubuntu1), libdebhelper-perl (= 13.2.1ubuntu1), libdpkg-perl (= 1.20.5ubuntu2), libelf1 (= 0.181-1), libffi8ubuntu1 (= 3.4~20200819gead65ca871-0ubuntu3), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-16ubuntu1), libgcc-s1 (= 10.2.0-16ubuntu1), libgcrypt20 (= 1.8.5-5ubuntu2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.2-1), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgnutls30 (= 3.6.15-4ubuntu2), libgomp1 (= 10.2.0-16ubuntu1), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhogweed6 (= 3.6-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-2), libisl22 (= 0.22.1-1), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3ubuntu1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.6-2), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libp11-kit0 (= 0.23.21-2build1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libseccomp2 (= 2.4.3-1ubuntu5), libselinux1 (= 3.1-2build1), libsemanage-common (= 3.1-1build1), libsemanage1 (= 3.1-1build1), libsepol1 (= 3.1-1), libsigsegv2 (= 2.12-2build1), libsmartcols1 (= 2.36-3ubuntu1), libssl1.1 (= 1.1.1f-1ubuntu4), libstdc++-10-dev (= 10.2.0-16ubuntu1), libstdc++6 (= 10.2.0-16ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-2ubuntu1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20200918-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libubsan1 (= 10.2.0-16ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-2ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3ubuntu1), libxml2 (= 2.9.10+dfsg-6.2), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.0-26.27), login (= 1:4.8.1-1ubuntu6), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), passwd (= 1:4.8.1-1ubuntu6), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1ubuntu1), po-debconf (= 1.0.21), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.13), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.30+dfsg-7), ubuntu-keyring (= 2020.06.17.1), util-linux (= 2.36-3ubuntu1), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1604668682" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbambamc-dev_0.0.50-4_armhf.deb --------------------------------- new Debian package, version 2.0. size 42408 bytes: control archive=1840 bytes. 762 bytes, 17 lines control 2992 bytes, 39 lines md5sums Package: libbambamc-dev Source: bambamc Version: 0.0.50-4 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 209 Depends: libbambamc0 (= 0.0.50-4), pkg-config, zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/gt1/bambamc Description: Development files for reading and writing BAM (genome alignment) files The BAM Format is a binary format for storing sequence data. This is a lightweight C implementation of the read name collation code from the larger bambam C++ project to handle BAM file input and BAM file output. . This package contains the static library and header files. drwxr-xr-x root/root 0 2020-11-06 13:18 ./ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/include/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/include/bambamc/ -rw-r--r-- root/root 2098 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamAlignmentPut.h -rw-r--r-- root/root 1281 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollationHash.h -rw-r--r-- root/root 2025 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollationHashEntry.h -rw-r--r-- root/root 1876 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollationOutputVector.h -rw-r--r-- root/root 1760 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollationTempFileGenerator.h -rw-r--r-- root/root 1839 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollationVector.h -rw-r--r-- root/root 3373 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollator.h -rw-r--r-- root/root 1327 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamCollatorInterface.h -rw-r--r-- root/root 1383 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamFileDecoder.h -rw-r--r-- root/root 2146 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamFileHeader.h -rw-r--r-- root/root 1414 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamFlagBase.h -rw-r--r-- root/root 1794 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamHeaderInfo.h -rw-r--r-- root/root 6321 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamSingleAlignment.h -rw-r--r-- root/root 2128 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BamWriter.h -rw-r--r-- root/root 2960 2020-11-06 13:18 ./usr/include/bambamc/BamBam_BgzfCompressor.h -rw-r--r-- root/root 2813 2020-11-06 13:18 ./usr/include/bambamc/BamBam_CharBuffer.h -rw-r--r-- root/root 1178 2020-11-06 13:18 ./usr/include/bambamc/BamBam_Chromosome.h -rw-r--r-- root/root 979 2020-11-06 13:18 ./usr/include/bambamc/BamBam_CollatorState.h -rw-r--r-- root/root 836 2020-11-06 13:18 ./usr/include/bambamc/BamBam_Config.h -rw-r--r-- root/root 1241 2020-11-06 13:18 ./usr/include/bambamc/BamBam_FastQRead.h -rw-r--r-- root/root 1133 2020-11-06 13:18 ./usr/include/bambamc/BamBam_FormatAlignment.h -rw-r--r-- root/root 1233 2020-11-06 13:18 ./usr/include/bambamc/BamBam_FormatNumber.h -rw-r--r-- root/root 1362 2020-11-06 13:18 ./usr/include/bambamc/BamBam_GzipFileDecoder.h -rw-r--r-- root/root 1618 2020-11-06 13:18 ./usr/include/bambamc/BamBam_GzipReader.h -rw-r--r-- root/root 1623 2020-11-06 13:18 ./usr/include/bambamc/BamBam_GzipWriter.h -rw-r--r-- root/root 1096 2020-11-06 13:18 ./usr/include/bambamc/BamBam_Hash.h -rw-r--r-- root/root 1516 2020-11-06 13:18 ./usr/include/bambamc/BamBam_LineBuffer.h -rw-r--r-- root/root 1365 2020-11-06 13:18 ./usr/include/bambamc/BamBam_LineParsing.h -rw-r--r-- root/root 1468 2020-11-06 13:18 ./usr/include/bambamc/BamBam_List.h -rw-r--r-- root/root 1659 2020-11-06 13:18 ./usr/include/bambamc/BamBam_ListNode.h -rw-r--r-- root/root 1026 2020-11-06 13:18 ./usr/include/bambamc/BamBam_MergeHeapEntry.h -rw-r--r-- root/root 1440 2020-11-06 13:18 ./usr/include/bambamc/BamBam_SamBamFileDecoder.h -rw-r--r-- root/root 1753 2020-11-06 13:18 ./usr/include/bambamc/BamBam_SamFileDecoder.h -rw-r--r-- root/root 2181 2020-11-06 13:18 ./usr/include/bambamc/BamBam_SamInfo.h -rw-r--r-- root/root 942 2020-11-06 13:18 ./usr/include/bambamc/BamBam_StrDup.h -rw-r--r-- root/root 980 2020-11-06 13:18 ./usr/include/bambamc/BamBam_Unused.h drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 114582 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/libbambamc.a lrwxrwxrwx root/root 0 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/libbambamc.so -> libbambamc.so.0.0.50 drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 224 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/pkgconfig/bambamc.pc drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/doc/libbambamc-dev/ lrwxrwxrwx root/root 0 2020-11-06 13:18 ./usr/share/doc/libbambamc-dev/changelog.Debian.gz -> ../libbambamc0/changelog.Debian.gz -rw-r--r-- root/root 1517 2020-11-06 13:18 ./usr/share/doc/libbambamc-dev/copyright libbambamc0_0.0.50-4_armhf.deb ------------------------------ new Debian package, version 2.0. size 29996 bytes: control archive=932 bytes. 678 bytes, 15 lines control 233 bytes, 3 lines md5sums 37 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libbambamc0 Source: bambamc Version: 0.0.50-4 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 72 Depends: libc6 (>= 2.4), zlib1g (>= 1:1.2.0.2) Section: libs Priority: optional Homepage: https://github.com/gt1/bambamc Description: Runtime library for reading and writing BAM (genome alignment) files The BAM Format is a binary format for storing sequence data. This is a lightweight C implementation of the read name collation code from the larger bambam C++ project to handle BAM file input and BAM file output. drwxr-xr-x root/root 0 2020-11-06 13:18 ./ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/libbambamc.so.0 -> libbambamc.so.0.0.50 -rw-r--r-- root/root 58956 2020-11-06 13:18 ./usr/lib/arm-linux-gnueabihf/libbambamc.so.0.0.50 drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-06 13:18 ./usr/share/doc/libbambamc0/ -rw-r--r-- root/root 574 2020-11-06 13:18 ./usr/share/doc/libbambamc0/changelog.Debian.gz -rw-r--r-- root/root 1517 2020-11-06 13:18 ./usr/share/doc/libbambamc0/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: n/a Build-Time: 59 Distribution: hirsute-proposed Host Architecture: armhf Install-Time: 23 Job: bambamc_0.0.50-4.dsc Machine Architecture: arm64 Package: bambamc Package-Time: 85 Source-Version: 0.0.50-4 Space: n/a Status: successful Version: 0.0.50-4 -------------------------------------------------------------------------------- Finished at 2020-11-06T17:18:02Z Build needed 00:01:25, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20255717 Scanning for processes to kill in build PACKAGEBUILD-20255717