https://launchpad.net/ubuntu/+source/bambamc/0.0.50-6/+build/22593627 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy01-amd64-001 4.15.0-163-generic #171-Ubuntu SMP Fri Nov 5 11:55:11 UTC 2021 x86_64 Buildd toolchain package versions: launchpad-buildd_204~508~ubuntu18.04.1 python3-lpbuildd_204~508~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 6 Dec 05:16:49 ntpdate[1720]: adjust time server 10.211.37.1 offset -0.000312 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22593627 --image-type chroot /home/buildd/filecache-default/b0c128df17a460089eca69348f06144377489985 Creating target for build PACKAGEBUILD-22593627 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22593627 Starting target for build PACKAGEBUILD-22593627 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22593627 'deb http://ftpmaster.internal/ubuntu jammy main universe' 'deb http://ftpmaster.internal/ubuntu jammy-security main universe' 'deb http://ftpmaster.internal/ubuntu jammy-updates main universe' 'deb http://ftpmaster.internal/ubuntu jammy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-22593627 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22593627 Updating target for build PACKAGEBUILD-22593627 Get:1 http://ftpmaster.internal/ubuntu jammy InRelease [270 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 Packages [1397 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/universe amd64 Packages [13.3 MB] Get:8 http://ftpmaster.internal/ubuntu jammy/universe Translation-en [5566 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 Packages [234 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main Translation-en [80.0 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 Packages [1151 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/universe Translation-en [506 kB] Fetched 23.4 MB in 3s (7743 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be REMOVED: libsemanage1* The following NEW packages will be installed: libsemanage2 libsepol2 libssl3 The following packages will be upgraded: apt base-files bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils bzip2 ca-certificates cpp-11 dash debconf debianutils dpkg dpkg-dev e2fsprogs g++-11 gcc-11 gcc-11-base gpg gpg-agent gpgconf gpgv grep libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libattr1 libbinutils libblkid1 libbz2-1.0 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdpkg-perl libext2fs2 libgcc-11-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libidn2-0 libip4tc2 libisl23 libitm1 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblsan0 libmount1 libmpc3 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsmartcols1 libsqlite3-0 libss2 libstdc++-11-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev lockfile-progs login logsave lto-disabled-list make mount ncurses-base ncurses-bin openssl passwd pkgbinarymangler sed sensible-utils systemd systemd-sysv systemd-timesyncd tzdata usrmerge util-linux 106 upgraded, 3 newly installed, 1 to remove and 0 not upgraded. Need to get 84.2 MB of archives. After this operation, 354 MB disk space will be freed. Get:1 http://ftpmaster.internal/ubuntu jammy/main amd64 debconf all 1.5.79 [126 kB] Get:2 http://ftpmaster.internal/ubuntu jammy/main amd64 libpam0g amd64 1.4.0-10ubuntu1 [61.4 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main amd64 libcrypt-dev amd64 1:4.4.26-1 [112 kB] Get:4 http://ftpmaster.internal/ubuntu jammy/main amd64 libcrypt1 amd64 1:4.4.26-1 [82.1 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 base-files amd64 12ubuntu2 [63.3 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main amd64 debianutils amd64 5.5-1ubuntu1 [107 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main amd64 bash amd64 5.1-5ubuntu1 [771 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main amd64 bsdutils amd64 1:2.37.2-4ubuntu1 [80.9 kB] Get:9 http://ftpmaster.internal/ubuntu jammy/main amd64 libgpg-error0 amd64 1.42-3 [68.1 kB] Get:10 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcrypt20 amd64 1.9.4-3ubuntu2 [515 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 bzip2 amd64 1.0.8-5 [34.8 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libbz2-1.0 amd64 1.0.8-5 [34.5 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main amd64 libcc1-0 amd64 11.2.0-12ubuntu1 [53.8 kB] Get:14 http://ftpmaster.internal/ubuntu jammy/main amd64 gcc-11-base amd64 11.2.0-12ubuntu1 [20.7 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcc-s1 amd64 11.2.0-12ubuntu1 [45.6 kB] Get:16 http://ftpmaster.internal/ubuntu jammy/main amd64 libgomp1 amd64 11.2.0-12ubuntu1 [117 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main amd64 libitm1 amd64 11.2.0-12ubuntu1 [30.0 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main amd64 libatomic1 amd64 11.2.0-12ubuntu1 [9998 B] Get:19 http://ftpmaster.internal/ubuntu jammy/main amd64 libasan6 amd64 11.2.0-12ubuntu1 [2282 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main amd64 liblsan0 amd64 11.2.0-12ubuntu1 [976 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main amd64 libtsan0 amd64 11.2.0-12ubuntu1 [2259 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main amd64 libubsan1 amd64 11.2.0-12ubuntu1 [922 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main amd64 libquadmath0 amd64 11.2.0-12ubuntu1 [154 kB] Get:24 http://ftpmaster.internal/ubuntu jammy/main amd64 g++-11 amd64 11.2.0-12ubuntu1 [11.4 MB] Get:25 http://ftpmaster.internal/ubuntu jammy/main amd64 libstdc++-11-dev amd64 11.2.0-12ubuntu1 [2098 kB] Get:26 http://ftpmaster.internal/ubuntu jammy/main amd64 libgcc-11-dev amd64 11.2.0-12ubuntu1 [2532 kB] Get:27 http://ftpmaster.internal/ubuntu jammy/main amd64 gcc-11 amd64 11.2.0-12ubuntu1 [20.1 MB] Get:28 http://ftpmaster.internal/ubuntu jammy/main amd64 cpp-11 amd64 11.2.0-12ubuntu1 [9962 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main amd64 libstdc++6 amd64 11.2.0-12ubuntu1 [656 kB] Get:30 http://ftpmaster.internal/ubuntu jammy/main amd64 libisl23 amd64 0.24-2 [728 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main amd64 libmpc3 amd64 1.2.1-1 [46.9 kB] Get:32 http://ftpmaster.internal/ubuntu jammy/main amd64 libzstd1 amd64 1.4.8+dfsg-3 [324 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main amd64 libctf0 amd64 2.37-10ubuntu1 [103 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main amd64 libctf-nobfd0 amd64 2.37-10ubuntu1 [106 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main amd64 libbinutils amd64 2.37-10ubuntu1 [653 kB] Get:36 http://ftpmaster.internal/ubuntu jammy/main amd64 binutils-common amd64 2.37-10ubuntu1 [213 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main amd64 binutils amd64 2.37-10ubuntu1 [3192 B] Get:38 http://ftpmaster.internal/ubuntu jammy/main amd64 binutils-x86-64-linux-gnu amd64 2.37-10ubuntu1 [2314 kB] Get:39 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libssl3 amd64 3.0.0-1ubuntu1 [1896 kB] Get:40 http://ftpmaster.internal/ubuntu jammy/main amd64 libblkid1 amd64 2.37.2-4ubuntu1 [103 kB] Get:41 http://ftpmaster.internal/ubuntu jammy/main amd64 libuuid1 amd64 2.37.2-4ubuntu1 [23.8 kB] Get:42 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libcryptsetup12 amd64 2:2.4.2-1ubuntu1 [208 kB] Get:43 http://ftpmaster.internal/ubuntu jammy/main amd64 libidn2-0 amd64 2.3.2-2 [66.5 kB] Get:44 http://ftpmaster.internal/ubuntu jammy/main amd64 libp11-kit0 amd64 0.24.0-6 [252 kB] Get:45 http://ftpmaster.internal/ubuntu jammy/main amd64 libtasn1-6 amd64 4.18.0-4 [42.9 kB] Get:46 http://ftpmaster.internal/ubuntu jammy/main amd64 libgnutls30 amd64 3.7.2-2ubuntu1 [957 kB] Get:47 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 systemd-timesyncd amd64 249.5-2ubuntu1 [31.0 kB] Get:48 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 systemd-sysv amd64 249.5-2ubuntu1 [10.5 kB] Get:49 http://ftpmaster.internal/ubuntu jammy/main amd64 libapparmor1 amd64 3.0.3-0ubuntu3 [37.8 kB] Get:50 http://ftpmaster.internal/ubuntu jammy/main amd64 libip4tc2 amd64 1.8.7-1ubuntu4 [19.8 kB] Get:51 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libkmod2 amd64 28-1ubuntu5 [48.0 kB] Get:52 http://ftpmaster.internal/ubuntu jammy/main amd64 libpcre2-8-0 amd64 10.39-3 [220 kB] Get:53 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libselinux1 amd64 3.3-1build1 [74.5 kB] Get:54 http://ftpmaster.internal/ubuntu jammy/main amd64 libmount1 amd64 2.37.2-4ubuntu1 [122 kB] Get:55 http://ftpmaster.internal/ubuntu jammy/main amd64 libseccomp2 amd64 2.5.2-2ubuntu2 [48.3 kB] Get:56 http://ftpmaster.internal/ubuntu jammy/main amd64 login amd64 1:4.8.1-2ubuntu1 [188 kB] Get:57 http://ftpmaster.internal/ubuntu jammy/main amd64 util-linux amd64 2.37.2-4ubuntu1 [1063 kB] Get:58 http://ftpmaster.internal/ubuntu jammy/main amd64 mount amd64 2.37.2-4ubuntu1 [114 kB] Get:59 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 systemd amd64 249.5-2ubuntu1 [4542 kB] Get:60 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libsystemd0 amd64 249.5-2ubuntu1 [319 kB] Get:61 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libudev1 amd64 249.5-2ubuntu1 [78.0 kB] Get:62 http://ftpmaster.internal/ubuntu jammy/main amd64 libapt-pkg6.0 amd64 2.3.13 [904 kB] Get:63 http://ftpmaster.internal/ubuntu jammy/main amd64 dpkg amd64 1.20.9ubuntu3 [1266 kB] Get:64 http://ftpmaster.internal/ubuntu jammy/main amd64 dash amd64 0.5.11+git20210903+057cd650a4ed-3 [91.8 kB] Get:65 http://ftpmaster.internal/ubuntu jammy/main amd64 grep amd64 3.7-1 [156 kB] Get:66 http://ftpmaster.internal/ubuntu jammy/main amd64 libncurses6 amd64 6.3-1 [111 kB] Get:67 http://ftpmaster.internal/ubuntu jammy/main amd64 libncursesw6 amd64 6.3-1 [147 kB] Get:68 http://ftpmaster.internal/ubuntu jammy/main amd64 libtinfo6 amd64 6.3-1 [104 kB] Get:69 http://ftpmaster.internal/ubuntu jammy/main amd64 ncurses-bin amd64 6.3-1 [184 kB] Get:70 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 sed amd64 4.8-1 [188 kB] Get:71 http://ftpmaster.internal/ubuntu jammy/main amd64 ncurses-base all 6.3-1 [19.9 kB] Get:72 http://ftpmaster.internal/ubuntu jammy/main amd64 gpgv amd64 2.2.27-2ubuntu1 [137 kB] Get:73 http://ftpmaster.internal/ubuntu jammy/main amd64 apt amd64 2.3.13 [1387 kB] Get:74 http://ftpmaster.internal/ubuntu jammy/main amd64 libsepol2 amd64 3.3-1 [281 kB] Get:75 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libsemanage-common all 3.3-1build1 [10.0 kB] Get:76 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libsemanage2 amd64 3.3-1build1 [92.4 kB] Get:77 http://ftpmaster.internal/ubuntu jammy/main amd64 passwd amd64 1:4.8.1-2ubuntu1 [765 kB] Get:78 http://ftpmaster.internal/ubuntu jammy/main amd64 libpam-modules-bin amd64 1.4.0-10ubuntu1 [37.4 kB] Get:79 http://ftpmaster.internal/ubuntu jammy/main amd64 libpam-modules amd64 1.4.0-10ubuntu1 [280 kB] Get:80 http://ftpmaster.internal/ubuntu jammy/main amd64 logsave amd64 1.46.4-1ubuntu1 [10.9 kB] Get:81 http://ftpmaster.internal/ubuntu jammy/main amd64 libext2fs2 amd64 1.46.4-1ubuntu1 [209 kB] Get:82 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amd64 1.46.4-1ubuntu1 [12.3 kB] Get:92 http://ftpmaster.internal/ubuntu jammy/main amd64 sensible-utils all 0.0.17 [20.1 kB] Get:93 http://ftpmaster.internal/ubuntu jammy/main amd64 usrmerge all 25ubuntu2 [54.7 kB] Get:94 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 openssl amd64 3.0.0-1ubuntu1 [1180 kB] Get:95 http://ftpmaster.internal/ubuntu jammy/main amd64 ca-certificates all 20211016 [148 kB] Get:96 http://ftpmaster.internal/ubuntu jammy/main amd64 libsqlite3-0 amd64 3.36.0-2 [641 kB] Get:97 http://ftpmaster.internal/ubuntu jammy/main amd64 tzdata all 2021e-1ubuntu1 [343 kB] Get:98 http://ftpmaster.internal/ubuntu jammy/main amd64 libgdbm6 amd64 1.22-1 [35.2 kB] Get:99 http://ftpmaster.internal/ubuntu jammy/main amd64 dpkg-dev all 1.20.9ubuntu3 [933 kB] Get:100 http://ftpmaster.internal/ubuntu jammy/main amd64 libdpkg-perl all 1.20.9ubuntu3 [235 kB] Get:101 http://ftpmaster.internal/ubuntu jammy/main amd64 make amd64 4.3-4ubuntu2 [179 kB] Get:102 http://ftpmaster.internal/ubuntu jammy/main amd64 lto-disabled-list all 17 [12.1 kB] Get:103 http://ftpmaster.internal/ubuntu jammy/main amd64 gpg amd64 2.2.27-2ubuntu1 [518 kB] Get:104 http://ftpmaster.internal/ubuntu jammy/main amd64 gpgconf amd64 2.2.27-2ubuntu1 [93.9 kB] Get:105 http://ftpmaster.internal/ubuntu jammy/main amd64 gpg-agent amd64 2.2.27-2ubuntu1 [209 kB] Get:106 http://ftpmaster.internal/ubuntu jammy/main amd64 libgdbm-compat4 amd64 1.22-1 [6450 B] Get:107 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 linux-libc-dev amd64 5.15.0-13.13 [1273 kB] Get:108 http://ftpmaster.internal/ubuntu jammy/main amd64 lockfile-progs amd64 0.1.19 [10.0 kB] Get:109 http://ftpmaster.internal/ubuntu jammy/main amd64 pkgbinarymangler all 149 [32.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 84.2 MB in 1s (82.6 MB/s) (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../debconf_1.5.79_all.deb ... Unpacking debconf (1.5.79) over (1.5.77) ... Setting up debconf (1.5.79) ... (Reading database ... 13257 files and directories currently installed.) Preparing to unpack .../libpam0g_1.4.0-10ubuntu1_amd64.deb ... Unpacking libpam0g:amd64 (1.4.0-10ubuntu1) over (1.3.1-5ubuntu11) ... Setting up libpam0g:amd64 (1.4.0-10ubuntu1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. (Reading database ... 13257 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.26-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.26-1) over (1:4.4.18-4ubuntu2) ... Preparing to unpack .../libcrypt1_1%3a4.4.26-1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.26-1) over (1:4.4.18-4ubuntu2) ... Setting up libcrypt1:amd64 (1:4.4.26-1) ... (Reading database ... 13257 files and directories currently installed.) Preparing to unpack .../base-files_12ubuntu2_amd64.deb ... 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Setting up systemd (249.5-2ubuntu1) ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Initializing machine ID from random generator. Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 7 added, 8 removed; done. Setting up systemd-timesyncd (249.5-2ubuntu1) ... Setting up libgdbm-compat4:amd64 (1.22-1) ... Setting up libgcc-11-dev:amd64 (11.2.0-12ubuntu1) ... Setting up binutils-x86-64-linux-gnu (2.37-10ubuntu1) ... Setting up systemd-sysv (249.5-2ubuntu1) ... Setting up binutils (2.37-10ubuntu1) ... Setting up dpkg-dev (1.20.9ubuntu3) ... Setting up libstdc++-11-dev:amd64 (11.2.0-12ubuntu1) ... Setting up gcc-11 (11.2.0-12ubuntu1) ... Setting up g++-11 (11.2.0-12ubuntu1) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22593627 amd64 jammy-proposed -c chroot:build-PACKAGEBUILD-22593627 --arch=amd64 --dist=jammy-proposed --nolog -A bambamc_0.0.50-6.dsc Initiating build PACKAGEBUILD-22593627 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-163-generic #171-Ubuntu SMP Fri Nov 5 11:55:11 UTC 2021 x86_64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on lcy01-amd64-001.buildd +==============================================================================+ | bambamc 0.0.50-6 (amd64) Mon, 06 Dec 2021 05:17:14 +0000 | +==============================================================================+ Package: bambamc Version: 0.0.50-6 Source Version: 0.0.50-6 Distribution: jammy-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22593627/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- bambamc_0.0.50-6.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/bambamc-d0lshe/bambamc-0.0.50' with '<>' I: NOTICE: Log filtering will replace 'build/bambamc-d0lshe' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-QtZCkA/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-QtZCkA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-QtZCkA/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-QtZCkA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-QtZCkA/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-QtZCkA/apt_archive ./ Packages [434 B] Fetched 1740 B in 0s (150 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: systemd-timesyncd Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 652 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-QtZCkA/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [652 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 652 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13453 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-bambamc-dummy' in '/<>/resolver-QtZCkA/apt_archive/sbuild-build-depends-bambamc-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-bambamc-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-QtZCkA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-QtZCkA/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-QtZCkA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-QtZCkA/apt_archive ./ Sources [514 B] Get:5 copy:/<>/resolver-QtZCkA/apt_archive ./ Packages [594 B] Fetched 2071 B in 0s (197 kB/s) Reading package lists... Reading package lists... Install bambamc build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: systemd-timesyncd Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-bambamc-dummy zlib1g-dev 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After this operation, 69.0 MB of additional disk space will be used. Get:1 copy:/<>/resolver-QtZCkA/apt_archive ./ sbuild-build-depends-bambamc-dummy 0.invalid.0 [686 B] Get:2 http://ftpmaster.internal/ubuntu jammy/main amd64 bsdextrautils amd64 2.37.2-4ubuntu1 [71.1 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main amd64 libuchardet0 amd64 0.0.7-1build1 [76.7 kB] Get:4 http://ftpmaster.internal/ubuntu jammy/main amd64 groff-base amd64 1.22.4-7 [956 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 libpipeline1 amd64 1.5.4-1 [23.6 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main amd64 man-db amd64 2.9.4-2build1 [1180 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main amd64 libelf1 amd64 0.186-1 [51.4 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main amd64 libglib2.0-0 amd64 2.70.2-1 [1436 kB] Get:9 http://ftpmaster.internal/ubuntu jammy/main amd64 libicu67 amd64 67.1-7ubuntu1 [10.1 MB] Get:10 http://ftpmaster.internal/ubuntu jammy/main amd64 libxml2 amd64 2.9.12+dfsg-5 [761 kB] Get:11 http://ftpmaster.internal/ubuntu jammy/main amd64 libmagic-mgc amd64 1:5.41-2 [257 kB] Get:12 http://ftpmaster.internal/ubuntu jammy/main amd64 libmagic1 amd64 1:5.41-2 [87.3 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main amd64 file amd64 1:5.41-2 [21.5 kB] Get:14 http://ftpmaster.internal/ubuntu jammy/main amd64 gettext-base amd64 0.21-4ubuntu3 [36.6 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main amd64 libsigsegv2 amd64 2.13-1ubuntu2 [14.6 kB] Get:16 http://ftpmaster.internal/ubuntu jammy/main amd64 m4 amd64 1.4.18-5ubuntu1 [199 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main amd64 autoconf all 2.71-2 [338 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main amd64 autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:19 http://ftpmaster.internal/ubuntu jammy/main amd64 automake all 1:1.16.5-1.1 [558 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main amd64 autopoint all 0.21-4ubuntu3 [422 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/universe amd64 d-shlibs all 0.104 [10.2 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main amd64 libdebhelper-perl all 13.5.2ubuntu1 [66.0 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main amd64 libtool all 2.4.6-15build1 [164 kB] Get:24 http://ftpmaster.internal/ubuntu jammy/main amd64 dh-autoreconf all 20 [16.1 kB] Get:25 http://ftpmaster.internal/ubuntu jammy/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:26 http://ftpmaster.internal/ubuntu jammy/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:27 http://ftpmaster.internal/ubuntu jammy/main amd64 libfile-stripnondeterminism-perl all 1.12.1-1 [18.1 kB] Get:28 http://ftpmaster.internal/ubuntu jammy/main amd64 dh-strip-nondeterminism all 1.12.1-1 [5200 B] Get:29 http://ftpmaster.internal/ubuntu jammy/main amd64 libdw1 amd64 0.186-1 [251 kB] Get:30 http://ftpmaster.internal/ubuntu jammy/main amd64 debugedit amd64 1:5.0-3 [47.0 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main amd64 dwz amd64 0.14-1build1 [104 kB] Get:32 http://ftpmaster.internal/ubuntu jammy/main amd64 gettext amd64 0.21-4ubuntu3 [824 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main amd64 debhelper all 13.5.2ubuntu1 [926 kB] Get:36 http://ftpmaster.internal/ubuntu jammy/main amd64 pkg-config amd64 0.29.2-1ubuntu2 [48.2 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu7 [164 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.6 MB in 0s (63.6 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 13453 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.37.2-4ubuntu1_amd64.deb ... Unpacking bsdextrautils (2.37.2-4ubuntu1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1build1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1build1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.4-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.4-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2build1_amd64.deb ... Unpacking man-db (2.9.4-2build1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../05-libelf1_0.186-1_amd64.deb ... Unpacking libelf1:amd64 (0.186-1) ... 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Preparing to unpack .../36-sbuild-build-depends-bambamc-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-bambamc-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.4-1) ... Setting up bsdextrautils (2.37.2-4ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7ubuntu1) ... Setting up libmagic-mgc (1:5.41-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.70.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.5.2ubuntu1) ... Setting up libmagic1:amd64 (1:5.41-2) ... Setting up gettext-base (0.21-4ubuntu3) ... Setting up file (1:5.41-2) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:amd64 (2.13-1ubuntu2) ... Setting up autopoint (0.21-4ubuntu3) ... Setting up pkg-config (0.29.2-1ubuntu2) ... Setting up d-shlibs (0.104) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu7) ... Setting up libuchardet0:amd64 (0.0.7-1build1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:amd64 (0.186-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up libfile-stripnondeterminism-perl (1.12.1-1) ... Setting up libdw1:amd64 (0.186-1) ... Setting up gettext (0.21-4ubuntu3) ... Setting up libtool (2.4.6-15build1) ... Setting up m4 (1.4.18-5ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.1-1) ... Setting up dwz (0.14-1build1) ... Setting up groff-base (1.22.4-7) ... Setting up debugedit (1:5.0-3) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up dh-autoreconf (20) ... Setting up debhelper (13.5.2ubuntu1) ... Setting up sbuild-build-depends-bambamc-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-163-generic amd64 (x86_64) Toolchain package versions: binutils_2.37-10ubuntu1 dpkg-dev_1.20.9ubuntu3 g++-11_11.2.0-12ubuntu1 gcc-11_11.2.0-12ubuntu1 libc6-dev_2.34-0ubuntu3 libstdc++-11-dev_11.2.0-12ubuntu1 libstdc++6_11.2.0-12ubuntu1 linux-libc-dev_5.15.0-13.13 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.13 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_12ubuntu2 base-passwd_3.5.52 bash_5.1-5ubuntu1 binutils_2.37-10ubuntu1 binutils-common_2.37-10ubuntu1 binutils-x86-64-linux-gnu_2.37-10ubuntu1 bsdextrautils_2.37.2-4ubuntu1 bsdutils_1:2.37.2-4ubuntu1 build-essential_12.9ubuntu2 bzip2_1.0.8-5 ca-certificates_20211016 coreutils_8.32-4ubuntu3 cpp_4:11.2.0-1ubuntu1 cpp-11_11.2.0-12ubuntu1 d-shlibs_0.104 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.5.2ubuntu1 debianutils_5.5-1ubuntu1 debugedit_1:5.0-3 dh-autoreconf_20 dh-strip-nondeterminism_1.12.1-1 diffutils_1:3.8-0ubuntu1 dpkg_1.20.9ubuntu3 dpkg-dev_1.20.9ubuntu3 dwz_0.14-1build1 e2fsprogs_1.46.4-1ubuntu1 fakeroot_1.25.3-1.1ubuntu3 file_1:5.41-2 findutils_4.8.0-1ubuntu2 g++_4:11.2.0-1ubuntu1 g++-11_11.2.0-12ubuntu1 gcc_4:11.2.0-1ubuntu1 gcc-11_11.2.0-12ubuntu1 gcc-11-base_11.2.0-12ubuntu1 gettext_0.21-4ubuntu3 gettext-base_0.21-4ubuntu3 gpg_2.2.27-2ubuntu1 gpg-agent_2.2.27-2ubuntu1 gpgconf_2.2.27-2ubuntu1 gpgv_2.2.27-2ubuntu1 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4ubuntu2 hostname_3.23ubuntu1 init_1.60build1 init-system-helpers_1.60build1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10ubuntu2 libapparmor1_3.0.3-0ubuntu3 libapt-pkg6.0_2.3.13 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build22 libasan6_11.2.0-12ubuntu1 libassuan0_2.5.5-1 libatomic1_11.2.0-12ubuntu1 libattr1_1:2.5.1-1 libaudit-common_1:3.0-2ubuntu3 libaudit1_1:3.0-2ubuntu3 libbinutils_2.37-10ubuntu1 libblkid1_2.37.2-4ubuntu1 libbz2-1.0_1.0.8-5 libc-bin_2.34-0ubuntu3 libc-dev-bin_2.34-0ubuntu3 libc6_2.34-0ubuntu3 libc6-dev_2.34-0ubuntu3 libcap-ng0_0.7.9-2.2build2 libcap2_1:2.44-1build2 libcc1-0_11.2.0-12ubuntu1 libcom-err2_1.46.4-1ubuntu1 libcrypt-dev_1:4.4.26-1 libcrypt1_1:4.4.26-1 libcryptsetup12_2:2.4.2-1ubuntu1 libctf-nobfd0_2.37-10ubuntu1 libctf0_2.37-10ubuntu1 libdb5.3_5.3.28+dfsg1-0.8ubuntu2 libdebconfclient0_0.256ubuntu4 libdebhelper-perl_13.5.2ubuntu1 libdevmapper1.02.1_2:1.02.175-2.1ubuntu3 libdpkg-perl_1.20.9ubuntu3 libdw1_0.186-1 libelf1_0.186-1 libext2fs2_1.46.4-1ubuntu1 libfakeroot_1.25.3-1.1ubuntu3 libffi8_3.4.2-1ubuntu5 libfile-stripnondeterminism-perl_1.12.1-1 libgcc-11-dev_11.2.0-12ubuntu1 libgcc-s1_11.2.0-12ubuntu1 libgcrypt20_1.9.4-3ubuntu2 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libglib2.0-0_2.70.2-1 libgmp10_2:6.2.1+dfsg-1ubuntu3 libgnutls30_3.7.2-2ubuntu1 libgomp1_11.2.0-12ubuntu1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.19.2-0ubuntu1 libhogweed6_3.7.3-1build1 libicu67_67.1-7ubuntu1 libidn2-0_2.3.2-2 libip4tc2_1.8.7-1ubuntu4 libisl23_0.24-2 libitm1_11.2.0-12ubuntu1 libjson-c5_0.15-2build3 libk5crypto3_1.19.2-0ubuntu1 libkeyutils1_1.6.1-2ubuntu2 libkmod2_28-1ubuntu5 libkrb5-3_1.19.2-0ubuntu1 libkrb5support0_1.19.2-0ubuntu1 liblockfile-bin_1.17-1build1 liblockfile1_1.17-1build1 liblsan0_11.2.0-12ubuntu1 liblz4-1_1.9.3-2build1 liblzma5_5.2.5-2build1 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.2-4ubuntu1 libmpc3_1.2.1-1 libmpfr6_4.1.0-3build2 libncurses6_6.3-1 libncursesw6_6.3-1 libnettle8_3.7.3-1build1 libnpth0_1.6-3build1 libnsl-dev_1.3.0-2build1 libnsl2_1.3.0-2build1 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-10ubuntu1 libpam-modules-bin_1.4.0-10ubuntu1 libpam-runtime_1.4.0-10ubuntu1 libpam0g_1.4.0-10ubuntu1 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13build4 libperl5.32_5.32.1-3ubuntu3 libpipeline1_1.5.4-1 libpng16-16_1.6.37-3build4 libprocps8_2:3.3.17-5ubuntu3 libquadmath0_11.2.0-12ubuntu1 libreadline8_8.1-2build1 libseccomp2_2.5.2-2ubuntu2 libselinux1_3.3-1build1 libsemanage-common_3.3-1build1 libsemanage2_3.3-1build1 libsepol1_3.1-1ubuntu2 libsepol2_3.3-1 libsigsegv2_2.13-1ubuntu2 libsmartcols1_2.37.2-4ubuntu1 libsqlite3-0_3.36.0-2 libss2_1.46.4-1ubuntu1 libssl1.1_1.1.1l-1ubuntu1 libssl3_3.0.0-1ubuntu1 libstdc++-11-dev_11.2.0-12ubuntu1 libstdc++6_11.2.0-12ubuntu1 libsub-override-perl_0.09-2 libsystemd0_249.5-2ubuntu1 libtasn1-6_4.18.0-4 libtinfo6_6.3-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15build1 libtsan0_11.2.0-12ubuntu1 libubsan1_11.2.0-12ubuntu1 libuchardet0_0.0.7-1build1 libudev1_249.5-2ubuntu1 libunistring2_0.9.10-6 libuuid1_2.37.2-4ubuntu1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2build1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.15.0-13.13 lockfile-progs_0.1.19 login_1:4.8.1-2ubuntu1 logsave_1.46.4-1ubuntu1 lsb-base_11.1.0ubuntu3 lto-disabled-list_17 m4_1.4.18-5ubuntu1 make_4.3-4ubuntu2 man-db_2.9.4-2build1 mawk_1.3.4.20200120-2build1 mount_2.37.2-4ubuntu1 ncurses-base_6.3-1 ncurses-bin_6.3-1 openssl_3.0.0-1ubuntu1 optipng_0.7.7-2 passwd_1:4.8.1-2ubuntu1 patch_2.7.6-7build1 perl_5.32.1-3ubuntu3 perl-base_5.32.1-3ubuntu3 perl-modules-5.32_5.32.1-3ubuntu3 pinentry-curses_1.1.1-1build1 pkg-config_0.29.2-1ubuntu2 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.17-5ubuntu3 readline-common_8.1-2build1 rpcsvc-proto_1.4.2-0ubuntu5 sbuild-build-depends-bambamc-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 systemd_249.5-2ubuntu1 systemd-sysv_249.5-2ubuntu1 systemd-timesyncd_249.5-2ubuntu1 sysvinit-utils_2.96-7ubuntu2 tar_1.34+dfsg-1build2 tzdata_2021e-1ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu2 util-linux_2.37.2-4ubuntu1 xz-utils_5.2.5-2build1 zlib1g_1:1.2.11.dfsg-2ubuntu7 zlib1g-dev_1:1.2.11.dfsg-2ubuntu7 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Dec 5 20:01:40 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bambamc_0.0.50-6.dsc dpkg-source: info: extracting bambamc in /<> dpkg-source: info: unpacking bambamc_0.0.50.orig.tar.gz dpkg-source: info: unpacking bambamc_0.0.50-6.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22593627 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22593627 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22593627 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package bambamc dpkg-buildpackage: info: source version 0.0.50-6 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf autoreconf: warning: autoconf input should be named 'configure.ac', not 'configure.in' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:3: warning: The macro `AC_CANONICAL_SYSTEM' is obsolete. configure.in:3: You should run autoupdate. ./lib/autoconf/general.m4:2081: AC_CANONICAL_SYSTEM is expanded from... configure.in:3: the top level configure.in:4: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.in:4: You should run autoupdate. m4/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.in:4: the top level configure.in:6: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.in:6: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:1021: AM_CONFIG_HEADER is expanded from... configure.in:6: the top level configure.in:15: warning: The macro `AC_PROG_CC_C99' is obsolete. configure.in:15: You should run autoupdate. ./lib/autoconf/c.m4:1659: AC_PROG_CC_C99 is expanded from... configure.in:15: the top level configure.in:27: warning: The macro `AC_HEADER_STDC' is obsolete. configure.in:27: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.in:27: the top level configure.in:40: warning: The macro `AC_TRY_LINK' is obsolete. configure.in:40: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.in:40: the top level configure.in:68: warning: The macro `AC_TRY_LINK' is obsolete. configure.in:68: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.in:68: the top level configure.in:144: warning: The macro `AC_TRY_LINK' is obsolete. configure.in:144: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.in:144: the top level configure.in:165: warning: AC_OUTPUT should be used without arguments. configure.in:165: You should run autoupdate. autoheader: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:4: installing './compile' configure.in:3: installing './config.guess' configure.in:3: installing './config.sub' configure.in:7: installing './install-sh' configure.in:7: installing './missing' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationHash.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollatorInterface.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_FormatAlignment.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationHashEntry.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_FormatNumber.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationOutputVector.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamHeaderInfo.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_Hash.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationTempFileGenerator.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamWriter.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_List.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollationVector.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_CharBuffer.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_ListNode.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamCollator.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_Chromosome.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipReader.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_LineParsing.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamFileHeader.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamAlignmentPut.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamSingleAlignment.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipWriter.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_GzipFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_BgzfCompressor.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_LineBuffer.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamInfo.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_SamBamFileDecoder.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:6: warning: source file 'bambamc/BamBam_StrDup.c' is in a subdirectory, src/Makefile.am:6: but option 'subdir-objects' is disabled src/Makefile.am:40: warning: source file 'test/bamreadertest.c' is in a subdirectory, src/Makefile.am:40: but option 'subdir-objects' is disabled src/Makefile.am:44: warning: source file 'test/bamwritertest.c' is in a subdirectory, src/Makefile.am:44: but option 'subdir-objects' is disabled src/Makefile.am: installing './depcomp' dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... no checking for mawk... mawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking whether make sets $(MAKE)... yes checking whether make supports the include directive... yes (GNU style) checking whether make supports nested variables... yes checking dependency style of gcc... none checking for egrep... (cached) /usr/bin/grep -E checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for zlib >= 0... yes checking for zlib >= 0... yes checking whether we can compile a zlib program... yes checking for _mkdir... no checking for direct.h... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating ubuntu.sh config.status: creating bambamc.pc config.status: creating src/bambamc/BamBam_Config.h config.status: creating config.h config.status: executing libtool commands config.status: executing depfiles commands dh_auto_build make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o bamreadertest-bamreadertest.o `test -f 'test/bamreadertest.c' || echo './'`test/bamreadertest.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationHash.lo `test -f 'bambamc/BamBam_BamCollationHash.c' || echo './'`bambamc/BamBam_BamCollationHash.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollatorInterface.lo `test -f 'bambamc/BamBam_BamCollatorInterface.c' || echo './'`bambamc/BamBam_BamCollatorInterface.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_FormatAlignment.lo `test -f 'bambamc/BamBam_FormatAlignment.c' || echo './'`bambamc/BamBam_FormatAlignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollatorInterface.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollatorInterface.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatAlignment.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_FormatAlignment.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHash.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationHash.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHash.c -o libbambamc_la-BamBam_BamCollationHash.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationHashEntry.lo `test -f 'bambamc/BamBam_BamCollationHashEntry.c' || echo './'`bambamc/BamBam_BamCollationHashEntry.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHashEntry.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationHashEntry.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatAlignment.c -o libbambamc_la-BamBam_FormatAlignment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_FormatNumber.lo `test -f 'bambamc/BamBam_FormatNumber.c' || echo './'`bambamc/BamBam_FormatNumber.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollatorInterface.c -o libbambamc_la-BamBam_BamCollatorInterface.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatNumber.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_FormatNumber.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationHashEntry.c -o libbambamc_la-BamBam_BamCollationHashEntry.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_FormatNumber.c -o libbambamc_la-BamBam_FormatNumber.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationOutputVector.lo `test -f 'bambamc/BamBam_BamCollationOutputVector.c' || echo './'`bambamc/BamBam_BamCollationOutputVector.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationOutputVector.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationOutputVector.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamHeaderInfo.lo `test -f 'bambamc/BamBam_BamHeaderInfo.c' || echo './'`bambamc/BamBam_BamHeaderInfo.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_Hash.lo `test -f 'bambamc/BamBam_Hash.c' || echo './'`bambamc/BamBam_Hash.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationTempFileGenerator.lo `test -f 'bambamc/BamBam_BamCollationTempFileGenerator.c' || echo './'`bambamc/BamBam_BamCollationTempFileGenerator.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamHeaderInfo.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamHeaderInfo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Hash.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_Hash.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationTempFileGenerator.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationTempFileGenerator.o bambamc/BamBam_Hash.c: In function ‘hash’: bambamc/BamBam_Hash.c:83:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 83 | case 11: c+=((uint32_t)k[10]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:84:17: note: here 84 | case 10: c+=((uint32_t)k[9]<<16); | ^~~~ bambamc/BamBam_Hash.c:84:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 84 | case 10: c+=((uint32_t)k[9]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:85:17: note: here 85 | case 9 : c+=((uint32_t)k[8]<<8); | ^~~~ bambamc/BamBam_Hash.c:85:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 85 | case 9 : c+=((uint32_t)k[8]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:87:17: note: here 87 | case 8 : b+=((uint32_t)k[7]<<24); | ^~~~ bambamc/BamBam_Hash.c:87:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 87 | case 8 : b+=((uint32_t)k[7]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:88:17: note: here 88 | case 7 : b+=((uint32_t)k[6]<<16); | ^~~~ bambamc/BamBam_Hash.c:88:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 88 | case 7 : b+=((uint32_t)k[6]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:89:17: note: here 89 | case 6 : b+=((uint32_t)k[5]<<8); | ^~~~ bambamc/BamBam_Hash.c:89:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 89 | case 6 : b+=((uint32_t)k[5]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:90:17: note: here 90 | case 5 : b+=k[4]; | ^~~~ bambamc/BamBam_Hash.c:90:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 90 | case 5 : b+=k[4]; | ~^~~~~~ bambamc/BamBam_Hash.c:91:17: note: here 91 | case 4 : a+=((uint32_t)k[3]<<24); | ^~~~ bambamc/BamBam_Hash.c:91:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 91 | case 4 : a+=((uint32_t)k[3]<<24); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:92:17: note: here 92 | case 3 : a+=((uint32_t)k[2]<<16); | ^~~~ bambamc/BamBam_Hash.c:92:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 92 | case 3 : a+=((uint32_t)k[2]<<16); | ~^~~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:93:17: note: here 93 | case 2 : a+=((uint32_t)k[1]<<8); | ^~~~ bambamc/BamBam_Hash.c:93:27: warning: this statement may fall through [-Wimplicit-fallthrough=] 93 | case 2 : a+=((uint32_t)k[1]<<8); | ~^~~~~~~~~~~~~~~~~~~~~ bambamc/BamBam_Hash.c:94:17: note: here 94 | case 1 : a+=k[0]; | ^~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationOutputVector.c -o libbambamc_la-BamBam_BamCollationOutputVector.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Hash.c -o libbambamc_la-BamBam_Hash.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationTempFileGenerator.c -o libbambamc_la-BamBam_BamCollationTempFileGenerator.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamWriter.lo `test -f 'bambamc/BamBam_BamWriter.c' || echo './'`bambamc/BamBam_BamWriter.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_List.lo `test -f 'bambamc/BamBam_List.c' || echo './'`bambamc/BamBam_List.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamWriter.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamWriter.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_List.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_List.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamHeaderInfo.c -o libbambamc_la-BamBam_BamHeaderInfo.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollationVector.lo `test -f 'bambamc/BamBam_BamCollationVector.c' || echo './'`bambamc/BamBam_BamCollationVector.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_List.c -o libbambamc_la-BamBam_List.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationVector.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollationVector.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamWriter.c -o libbambamc_la-BamBam_BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_CharBuffer.lo `test -f 'bambamc/BamBam_CharBuffer.c' || echo './'`bambamc/BamBam_CharBuffer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_CharBuffer.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_CharBuffer.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_ListNode.lo `test -f 'bambamc/BamBam_ListNode.c' || echo './'`bambamc/BamBam_ListNode.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollationVector.c -o libbambamc_la-BamBam_BamCollationVector.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamCollator.lo `test -f 'bambamc/BamBam_BamCollator.c' || echo './'`bambamc/BamBam_BamCollator.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_ListNode.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_ListNode.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollator.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamCollator.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_CharBuffer.c -o libbambamc_la-BamBam_CharBuffer.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_ListNode.c -o libbambamc_la-BamBam_ListNode.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_Chromosome.lo `test -f 'bambamc/BamBam_Chromosome.c' || echo './'`bambamc/BamBam_Chromosome.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipReader.lo `test -f 'bambamc/BamBam_GzipReader.c' || echo './'`bambamc/BamBam_GzipReader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Chromosome.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_Chromosome.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipReader.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipReader.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_LineParsing.lo `test -f 'bambamc/BamBam_LineParsing.c' || echo './'`bambamc/BamBam_LineParsing.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_Chromosome.c -o libbambamc_la-BamBam_Chromosome.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineParsing.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_LineParsing.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamFileHeader.lo `test -f 'bambamc/BamBam_BamFileHeader.c' || echo './'`bambamc/BamBam_BamFileHeader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipReader.c -o libbambamc_la-BamBam_GzipReader.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileHeader.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamFileHeader.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineParsing.c -o libbambamc_la-BamBam_LineParsing.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamAlignmentPut.lo `test -f 'bambamc/BamBam_BamAlignmentPut.c' || echo './'`bambamc/BamBam_BamAlignmentPut.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamCollator.c -o libbambamc_la-BamBam_BamCollator.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamAlignmentPut.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamAlignmentPut.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamSingleAlignment.lo `test -f 'bambamc/BamBam_BamSingleAlignment.c' || echo './'`bambamc/BamBam_BamSingleAlignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamSingleAlignment.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamSingleAlignment.o bambamc/BamBam_BamSingleAlignment.c: In function ‘BamBam_BamSingleAlignment_LoadAlignment’: bambamc/BamBam_BamSingleAlignment.c:882:48: warning: array subscript has type ‘char’ [-Wchar-subscripts] 882 | if ( ! bambamc_qnameValidTable[*cc] ) | ^~~ bambamc/BamBam_BamSingleAlignment.c:910:65: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 910 | if ( ue-BamBam_BamSingleAlignment_GetEncodedCigar(data) < BamBam_BamSingleAlignment_GetNC(data)*sizeof(uint32_t) ) | ^ bambamc/BamBam_BamSingleAlignment.c:957:29: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 957 | if ( ciglen != BamBam_BamSingleAlignment_GetLSeq(data) ) | ^~ bambamc/BamBam_BamSingleAlignment.c:1089:64: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1089 | if ( (ue-auxc) < (3+1+4+ 1*alen) ) | ^ bambamc/BamBam_BamSingleAlignment.c:1098:64: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1098 | if ( (ue-auxc) < (3+1+4+ 2*alen) ) | ^ bambamc/BamBam_BamSingleAlignment.c:1108:64: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1108 | if ( (ue-auxc) < (3+1+4+ 4*alen) ) | ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileHeader.c -o libbambamc_la-BamBam_BamFileHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BamFileDecoder.lo `test -f 'bambamc/BamBam_BamFileDecoder.c' || echo './'`bambamc/BamBam_BamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamAlignmentPut.c -o libbambamc_la-BamBam_BamAlignmentPut.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BamFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamFileDecoder.c -o libbambamc_la-BamBam_BamFileDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipWriter.lo `test -f 'bambamc/BamBam_GzipWriter.c' || echo './'`bambamc/BamBam_GzipWriter.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipWriter.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipWriter.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipWriter.c -o libbambamc_la-BamBam_GzipWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_GzipFileDecoder.lo `test -f 'bambamc/BamBam_GzipFileDecoder.c' || echo './'`bambamc/BamBam_GzipFileDecoder.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_BgzfCompressor.lo `test -f 'bambamc/BamBam_BgzfCompressor.c' || echo './'`bambamc/BamBam_BgzfCompressor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_GzipFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BgzfCompressor.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_BgzfCompressor.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_GzipFileDecoder.c -o libbambamc_la-BamBam_GzipFileDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_LineBuffer.lo `test -f 'bambamc/BamBam_LineBuffer.c' || echo './'`bambamc/BamBam_LineBuffer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineBuffer.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_LineBuffer.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BamSingleAlignment.c -o libbambamc_la-BamBam_BamSingleAlignment.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamInfo.lo `test -f 'bambamc/BamBam_SamInfo.c' || echo './'`bambamc/BamBam_SamInfo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamInfo.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamInfo.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_BgzfCompressor.c -o libbambamc_la-BamBam_BgzfCompressor.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_LineBuffer.c -o libbambamc_la-BamBam_LineBuffer.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamFileDecoder.lo `test -f 'bambamc/BamBam_SamFileDecoder.c' || echo './'`bambamc/BamBam_SamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamFileDecoder.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_SamBamFileDecoder.lo `test -f 'bambamc/BamBam_SamBamFileDecoder.c' || echo './'`bambamc/BamBam_SamBamFileDecoder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamBamFileDecoder.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_SamBamFileDecoder.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamInfo.c -o libbambamc_la-BamBam_SamInfo.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamFileDecoder.c -o libbambamc_la-BamBam_SamFileDecoder.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_SamBamFileDecoder.c -o libbambamc_la-BamBam_SamBamFileDecoder.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o libbambamc_la-BamBam_StrDup.lo `test -f 'bambamc/BamBam_StrDup.c' || echo './'`bambamc/BamBam_StrDup.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_StrDup.c -fPIC -DPIC -o .libs/libbambamc_la-BamBam_StrDup.o gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c -o bamwritertest-bamwritertest.o `test -f 'test/bamwritertest.c' || echo './'`test/bamwritertest.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -c bambamc/BamBam_StrDup.c -o libbambamc_la-BamBam_StrDup.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -version-info 0:50:0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -o libbambamc.la -rpath /usr/lib/x86_64-linux-gnu libbambamc_la-BamBam_BamCollationHash.lo libbambamc_la-BamBam_BamCollatorInterface.lo libbambamc_la-BamBam_FormatAlignment.lo libbambamc_la-BamBam_BamCollationHashEntry.lo libbambamc_la-BamBam_FormatNumber.lo libbambamc_la-BamBam_BamCollationOutputVector.lo libbambamc_la-BamBam_BamHeaderInfo.lo libbambamc_la-BamBam_Hash.lo libbambamc_la-BamBam_BamCollationTempFileGenerator.lo libbambamc_la-BamBam_BamWriter.lo libbambamc_la-BamBam_List.lo libbambamc_la-BamBam_BamCollationVector.lo libbambamc_la-BamBam_CharBuffer.lo libbambamc_la-BamBam_ListNode.lo libbambamc_la-BamBam_BamCollator.lo libbambamc_la-BamBam_Chromosome.lo libbambamc_la-BamBam_GzipReader.lo libbambamc_la-BamBam_LineParsing.lo libbambamc_la-BamBam_BamFileHeader.lo libbambamc_la-BamBam_BamAlignmentPut.lo libbambamc_la-BamBam_BamSingleAlignment.lo libbambamc_la-BamBam_BamFileDecoder.lo libbambamc_la-BamBam_GzipWriter.lo libbambamc_la-BamBam_GzipFileDecoder.lo libbambamc_la-BamBam_BgzfCompressor.lo libbambamc_la-BamBam_LineBuffer.lo libbambamc_la-BamBam_SamInfo.lo libbambamc_la-BamBam_SamFileDecoder.lo libbambamc_la-BamBam_SamBamFileDecoder.lo libbambamc_la-BamBam_StrDup.lo -lz libtool: link: gcc -shared -fPIC -DPIC .libs/libbambamc_la-BamBam_BamCollationHash.o .libs/libbambamc_la-BamBam_BamCollatorInterface.o .libs/libbambamc_la-BamBam_FormatAlignment.o .libs/libbambamc_la-BamBam_BamCollationHashEntry.o .libs/libbambamc_la-BamBam_FormatNumber.o .libs/libbambamc_la-BamBam_BamCollationOutputVector.o .libs/libbambamc_la-BamBam_BamHeaderInfo.o .libs/libbambamc_la-BamBam_Hash.o .libs/libbambamc_la-BamBam_BamCollationTempFileGenerator.o .libs/libbambamc_la-BamBam_BamWriter.o .libs/libbambamc_la-BamBam_List.o .libs/libbambamc_la-BamBam_BamCollationVector.o .libs/libbambamc_la-BamBam_CharBuffer.o .libs/libbambamc_la-BamBam_ListNode.o .libs/libbambamc_la-BamBam_BamCollator.o .libs/libbambamc_la-BamBam_Chromosome.o .libs/libbambamc_la-BamBam_GzipReader.o .libs/libbambamc_la-BamBam_LineParsing.o .libs/libbambamc_la-BamBam_BamFileHeader.o .libs/libbambamc_la-BamBam_BamAlignmentPut.o .libs/libbambamc_la-BamBam_BamSingleAlignment.o .libs/libbambamc_la-BamBam_BamFileDecoder.o .libs/libbambamc_la-BamBam_GzipWriter.o .libs/libbambamc_la-BamBam_GzipFileDecoder.o .libs/libbambamc_la-BamBam_BgzfCompressor.o .libs/libbambamc_la-BamBam_LineBuffer.o .libs/libbambamc_la-BamBam_SamInfo.o .libs/libbambamc_la-BamBam_SamFileDecoder.o .libs/libbambamc_la-BamBam_SamBamFileDecoder.o .libs/libbambamc_la-BamBam_StrDup.o -lz -g -O2 -flto=auto -fstack-protector-strong -O3 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-soname -Wl,libbambamc.so.0 -o .libs/libbambamc.so.0.0.50 libtool: link: (cd ".libs" && rm -f "libbambamc.so.0" && ln -s "libbambamc.so.0.0.50" "libbambamc.so.0") libtool: link: (cd ".libs" && rm -f "libbambamc.so" && ln -s "libbambamc.so.0.0.50" "libbambamc.so") libtool: link: ar cr .libs/libbambamc.a libbambamc_la-BamBam_BamCollationHash.o libbambamc_la-BamBam_BamCollatorInterface.o libbambamc_la-BamBam_FormatAlignment.o libbambamc_la-BamBam_BamCollationHashEntry.o libbambamc_la-BamBam_FormatNumber.o libbambamc_la-BamBam_BamCollationOutputVector.o libbambamc_la-BamBam_BamHeaderInfo.o libbambamc_la-BamBam_Hash.o libbambamc_la-BamBam_BamCollationTempFileGenerator.o libbambamc_la-BamBam_BamWriter.o libbambamc_la-BamBam_List.o libbambamc_la-BamBam_BamCollationVector.o libbambamc_la-BamBam_CharBuffer.o libbambamc_la-BamBam_ListNode.o libbambamc_la-BamBam_BamCollator.o libbambamc_la-BamBam_Chromosome.o libbambamc_la-BamBam_GzipReader.o libbambamc_la-BamBam_LineParsing.o libbambamc_la-BamBam_BamFileHeader.o libbambamc_la-BamBam_BamAlignmentPut.o libbambamc_la-BamBam_BamSingleAlignment.o libbambamc_la-BamBam_BamFileDecoder.o libbambamc_la-BamBam_GzipWriter.o libbambamc_la-BamBam_GzipFileDecoder.o libbambamc_la-BamBam_BgzfCompressor.o libbambamc_la-BamBam_LineBuffer.o libbambamc_la-BamBam_SamInfo.o libbambamc_la-BamBam_SamFileDecoder.o libbambamc_la-BamBam_SamBamFileDecoder.o libbambamc_la-BamBam_StrDup.o libtool: link: ranlib .libs/libbambamc.a libtool: link: ( cd ".libs" && rm -f "libbambamc.la" && ln -s "../libbambamc.la" "libbambamc.la" ) /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -o bamreadertest bamreadertest-bamreadertest.o libbambamc.la -lz /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -o bamwritertest bamwritertest-bamwritertest.o libbambamc.la -lz libtool: link: gcc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -o .libs/bamwritertest bamwritertest-bamwritertest.o ./.libs/libbambamc.so -lz libtool: link: gcc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -O3 -rdynamic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -o .libs/bamreadertest bamreadertest-bamreadertest.o ./.libs/libbambamc.so -lz make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libbambamc.la '/<>/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libbambamc.so.0.0.50 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.so.0.0.50 libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libbambamc.so.0.0.50 libbambamc.so.0 || { rm -f libbambamc.so.0 && ln -s libbambamc.so.0.0.50 libbambamc.so.0; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libbambamc.so.0.0.50 libbambamc.so || { rm -f libbambamc.so && ln -s libbambamc.so.0.0.50 libbambamc.so; }; }) libtool: install: /usr/bin/install -c .libs/libbambamc.lai /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.la libtool: install: /usr/bin/install -c .libs/libbambamc.a /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.a libtool: install: ranlib /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/bambamc' /usr/bin/install -c -m 644 bambamc/BamBam_BamAlignmentPut.h bambamc/BamBam_BamFlagBase.h bambamc/BamBam_FormatAlignment.h bambamc/BamBam_BamCollationHashEntry.h bambamc/BamBam_FormatNumber.h bambamc/BamBam_BamCollationHash.h bambamc/BamBam_BamHeaderInfo.h bambamc/BamBam_GzipReader.h bambamc/BamBam_BamCollationOutputVector.h bambamc/BamBam_BamSingleAlignment.h bambamc/BamBam_Hash.h bambamc/BamBam_BamCollationTempFileGenerator.h bambamc/BamBam_LineParsing.h bambamc/BamBam_BamCollationVector.h bambamc/BamBam_BamWriter.h bambamc/BamBam_List.h bambamc/BamBam_BamCollator.h bambamc/BamBam_CharBuffer.h bambamc/BamBam_ListNode.h bambamc/BamBam_BamCollatorInterface.h bambamc/BamBam_Chromosome.h bambamc/BamBam_MergeHeapEntry.h bambamc/BamBam_BamFileDecoder.h bambamc/BamBam_CollatorState.h bambamc/BamBam_Unused.h bambamc/BamBam_BamFileHeader.h bambamc/BamBam_FastQRead.h bambamc/BamBam_Config.h bambamc/BamBam_GzipWriter.h bambamc/BamBam_GzipFileDecoder.h bambamc/BamBam_BgzfCompressor.h bambamc/BamBam_LineBuffer.h bambamc/BamBam_SamInfo.h bambamc/BamBam_SamFileDecoder.h bambamc/BamBam_SamBamFileDecoder.h bambamc/BamBam_StrDup.h '/<>/debian/tmp/usr/include/bambamc' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 bambamc.pc '/<>/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/lib*.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libbambamc-dev/usr/lib/x86_64-linux-gnu install -d -m 755 debian/libbambamc0/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.a debian/libbambamc-dev/usr/lib/x86_64-linux-gnu mv debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.so debian/libbambamc-dev/usr/lib/x86_64-linux-gnu mv /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.so.0 debian/libbambamc0/usr/lib/x86_64-linux-gnu mv /<>/debian/tmp/usr/lib/x86_64-linux-gnu/libbambamc.so.0.0.50 debian/libbambamc0/usr/lib/x86_64-linux-gnu PKGDEV=libbambamc-dev PKGSHL=libbambamc0 install -d -m 755 debian/libbambamc-dev/usr/include mv debian/tmp/usr/include/bambamc debian/libbambamc-dev/usr/include find debian -name "lib*.la" -delete dh_install make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a 3ea26e68034e3d32e73e6494207e7df8162a4c0e dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libbambamc-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libbambamc-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums dh_builddeb INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing libbambamc0 (in debian/libbambamc0); do_strip: , oemstrip: pkgstriptranslations: processing libbambamc-dev (in debian/libbambamc-dev); do_strip: , oemstrip: pkgstriptranslations: processing libbambamc0-dbgsym (in debian/.debhelper/libbambamc0/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbambamc0/DEBIAN/control, package libbambamc0, directory debian/libbambamc0 pkgstripfiles: processing control file: debian/.debhelper/libbambamc0/dbgsym-root/DEBIAN/control, package libbambamc0-dbgsym, directory debian/.debhelper/libbambamc0/dbgsym-root dpkg-deb: building package 'libbambamc0-dbgsym' in 'debian/.debhelper/scratch-space/build-libbambamc0/libbambamc0-dbgsym_0.0.50-6_amd64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbambamc0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbambamc0' in '../libbambamc0_0.0.50-6_amd64.deb'. Renaming libbambamc0-dbgsym_0.0.50-6_amd64.deb to libbambamc0-dbgsym_0.0.50-6_amd64.ddeb pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbambamc-dev/DEBIAN/control, package libbambamc-dev, directory debian/libbambamc-dev Searching for duplicated docs in dependency libbambamc0... symlinking changelog.Debian.gz in libbambamc-dev to file in libbambamc0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbambamc-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbambamc-dev' in '../libbambamc-dev_0.0.50-6_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../bambamc_0.0.50-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-12-06T05:17:41Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bambamc_0.0.50-6_amd64.changes: ------------------------------- Format: 1.8 Date: Sun, 05 Dec 2021 20:59:57 +0100 Source: bambamc Binary: libbambamc-dev libbambamc0 Built-For-Profiles: noudeb Architecture: amd64 Version: 0.0.50-6 Distribution: jammy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: libbambamc-dev - Development files for reading and writing BAM (genome alignment) libbambamc0 - Runtime library for reading and writing BAM (genome alignment) fi Changes: bambamc (0.0.50-6) unstable; urgency=medium . * Really fix watch file Checksums-Sha1: 5ff77d516d0ef06f46b755080231a32952afd451 6579 bambamc_0.0.50-6_amd64.buildinfo a96bb3a31bdd6a045a92255e79fcb20cb75360ab 54156 libbambamc-dev_0.0.50-6_amd64.deb b90e6a6940426608a579a4ed820351a584a65690 110436 libbambamc0-dbgsym_0.0.50-6_amd64.ddeb 0c39b805c726599be8aa104f819b80a1eb44a04a 39372 libbambamc0_0.0.50-6_amd64.deb Checksums-Sha256: a4fd8f4cf486348dab531b2f38dccc9bbff27cd556009590ecaaef3c993e38ed 6579 bambamc_0.0.50-6_amd64.buildinfo e775f5a970d9cb2f9749f1ba18acd207aded0ec4b15c26a9468311580ca7481d 54156 libbambamc-dev_0.0.50-6_amd64.deb 9842e9305e0330c131fd16ad378e44b04a8bdba4418b0a6d6afcd43c7fb0cc9c 110436 libbambamc0-dbgsym_0.0.50-6_amd64.ddeb 648d7a8f3ee721df9474aa9e81c4cb32fc712b89c6b111eca0fd0e365298c05c 39372 libbambamc0_0.0.50-6_amd64.deb Files: 4e375db4f6bbfa7db1ba154235847fc6 6579 science optional bambamc_0.0.50-6_amd64.buildinfo 176d04ff259511def1118194d2b13da2 54156 libdevel optional libbambamc-dev_0.0.50-6_amd64.deb 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e775f5a970d9cb2f9749f1ba18acd207aded0ec4b15c26a9468311580ca7481d 54156 libbambamc-dev_0.0.50-6_amd64.deb 9842e9305e0330c131fd16ad378e44b04a8bdba4418b0a6d6afcd43c7fb0cc9c 110436 libbambamc0-dbgsym_0.0.50-6_amd64.ddeb 648d7a8f3ee721df9474aa9e81c4cb32fc712b89c6b111eca0fd0e365298c05c 39372 libbambamc0_0.0.50-6_amd64.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Mon, 06 Dec 2021 05:17:41 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: adduser (= 3.118ubuntu5), apt (= 2.3.13), autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4ubuntu3), autotools-dev (= 20180224.1+nmu1), base-files (= 12ubuntu2), base-passwd (= 3.5.52), bash (= 5.1-5ubuntu1), binutils (= 2.37-10ubuntu1), binutils-common (= 2.37-10ubuntu1), binutils-x86-64-linux-gnu (= 2.37-10ubuntu1), bsdextrautils (= 2.37.2-4ubuntu1), bsdutils (= 1:2.37.2-4ubuntu1), build-essential (= 12.9ubuntu2), bzip2 (= 1.0.8-5), coreutils (= 8.32-4ubuntu3), cpp (= 4:11.2.0-1ubuntu1), cpp-11 (= 11.2.0-12ubuntu1), d-shlibs (= 0.104), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.5.2ubuntu1), debianutils (= 5.5-1ubuntu1), debugedit (= 1:5.0-3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.1-1), diffutils (= 1:3.8-0ubuntu1), dpkg (= 1.20.9ubuntu3), dpkg-dev (= 1.20.9ubuntu3), dwz (= 0.14-1build1), file (= 1:5.41-2), findutils (= 4.8.0-1ubuntu2), g++ (= 4:11.2.0-1ubuntu1), g++-11 (= 11.2.0-12ubuntu1), gcc (= 4:11.2.0-1ubuntu1), gcc-11 (= 11.2.0-12ubuntu1), gcc-11-base (= 11.2.0-12ubuntu1), gettext (= 0.21-4ubuntu3), gettext-base (= 0.21-4ubuntu3), gpgv (= 2.2.27-2ubuntu1), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4ubuntu2), hostname (= 3.23ubuntu1), init-system-helpers (= 1.60build1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10ubuntu2), libapt-pkg6.0 (= 2.3.13), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-12ubuntu1), libatomic1 (= 11.2.0-12ubuntu1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0-2ubuntu3), libaudit1 (= 1:3.0-2ubuntu3), libbinutils (= 2.37-10ubuntu1), libblkid1 (= 2.37.2-4ubuntu1), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.34-0ubuntu3), libc-dev-bin (= 2.34-0ubuntu3), libc6 (= 2.34-0ubuntu3), libc6-dev (= 2.34-0ubuntu3), libcap-ng0 (= 0.7.9-2.2build2), libcap2 (= 1:2.44-1build2), libcc1-0 (= 11.2.0-12ubuntu1), libcom-err2 (= 1.46.4-1ubuntu1), libcrypt-dev (= 1:4.4.26-1), libcrypt1 (= 1:4.4.26-1), libctf-nobfd0 (= 2.37-10ubuntu1), libctf0 (= 2.37-10ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.8ubuntu2), libdebconfclient0 (= 0.256ubuntu4), libdebhelper-perl (= 13.5.2ubuntu1), libdpkg-perl (= 1.20.9ubuntu3), libdw1 (= 0.186-1), libelf1 (= 0.186-1), libffi8 (= 3.4.2-1ubuntu5), libfile-stripnondeterminism-perl (= 1.12.1-1), libgcc-11-dev (= 11.2.0-12ubuntu1), libgcc-s1 (= 11.2.0-12ubuntu1), libgcrypt20 (= 1.9.4-3ubuntu2), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libglib2.0-0 (= 2.70.2-1), libgmp10 (= 2:6.2.1+dfsg-1ubuntu3), libgnutls30 (= 3.7.2-2ubuntu1), libgomp1 (= 11.2.0-12ubuntu1), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.19.2-0ubuntu1), libhogweed6 (= 3.7.3-1build1), libicu67 (= 67.1-7ubuntu1), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 11.2.0-12ubuntu1), libk5crypto3 (= 1.19.2-0ubuntu1), libkeyutils1 (= 1.6.1-2ubuntu2), libkrb5-3 (= 1.19.2-0ubuntu1), libkrb5support0 (= 1.19.2-0ubuntu1), liblsan0 (= 11.2.0-12ubuntu1), liblz4-1 (= 1.9.3-2build1), liblzma5 (= 5.2.5-2build1), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmount1 (= 2.37.2-4ubuntu1), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3build2), libnettle8 (= 3.7.3-1build1), libnsl-dev (= 1.3.0-2build1), libnsl2 (= 1.3.0-2build1), libp11-kit0 (= 0.24.0-6), libpam-modules (= 1.4.0-10ubuntu1), libpam-modules-bin (= 1.4.0-10ubuntu1), libpam-runtime (= 1.4.0-10ubuntu1), libpam0g (= 1.4.0-10ubuntu1), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13build4), libperl5.32 (= 5.32.1-3ubuntu3), libpipeline1 (= 1.5.4-1), libquadmath0 (= 11.2.0-12ubuntu1), libseccomp2 (= 2.5.2-2ubuntu2), libselinux1 (= 3.3-1build1), libsemanage-common (= 3.3-1build1), libsemanage2 (= 3.3-1build1), libsepol2 (= 3.3-1), libsigsegv2 (= 2.13-1ubuntu2), libsmartcols1 (= 2.37.2-4ubuntu1), libssl3 (= 3.0.0-1ubuntu1), libstdc++-11-dev (= 11.2.0-12ubuntu1), libstdc++6 (= 11.2.0-12ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 249.5-2ubuntu1), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15build1), libtsan0 (= 11.2.0-12ubuntu1), libubsan1 (= 11.2.0-12ubuntu1), libuchardet0 (= 0.0.7-1build1), libudev1 (= 249.5-2ubuntu1), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-4ubuntu1), libxml2 (= 2.9.12+dfsg-5), libxxhash0 (= 0.8.0-2build1), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.15.0-13.13), login (= 1:4.8.1-2ubuntu1), lsb-base (= 11.1.0ubuntu3), lto-disabled-list (= 17), m4 (= 1.4.18-5ubuntu1), make (= 4.3-4ubuntu2), man-db (= 2.9.4-2build1), mawk (= 1.3.4.20200120-2build1), ncurses-base (= 6.3-1), ncurses-bin (= 6.3-1), passwd (= 1:4.8.1-2ubuntu1), patch (= 2.7.6-7build1), perl (= 5.32.1-3ubuntu3), perl-base (= 5.32.1-3ubuntu3), perl-modules-5.32 (= 5.32.1-3ubuntu3), pkg-config (= 0.29.2-1ubuntu2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-0ubuntu5), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 2.96-7ubuntu2), tar (= 1.34+dfsg-1build2), ubuntu-keyring (= 2021.03.26), util-linux (= 2.37.2-4ubuntu1), xz-utils (= 5.2.5-2build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu7), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu7) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1638734397" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbambamc-dev_0.0.50-6_amd64.deb --------------------------------- new Debian package, version 2.0. size 54156 bytes: control archive=1775 bytes. 779 bytes, 18 lines control 2986 bytes, 39 lines md5sums Package: libbambamc-dev Source: bambamc Version: 0.0.50-6 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 284 Depends: libbambamc0 (= 0.0.50-6), pkg-config, zlib1g-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/gt1/bambamc Description: Development files for reading and writing BAM (genome alignment) files The BAM Format is a binary format for storing sequence data. This is a lightweight C implementation of the read name collation code from the larger bambam C++ project to handle BAM file input and BAM file output. . This package contains the static library and header files. drwxr-xr-x root/root 0 2021-12-05 19:59 ./ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/include/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/include/bambamc/ -rw-r--r-- root/root 2098 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamAlignmentPut.h -rw-r--r-- root/root 1281 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollationHash.h -rw-r--r-- root/root 2025 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollationHashEntry.h -rw-r--r-- root/root 1876 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollationOutputVector.h -rw-r--r-- root/root 1760 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollationTempFileGenerator.h -rw-r--r-- root/root 1839 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollationVector.h -rw-r--r-- root/root 3373 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollator.h -rw-r--r-- root/root 1327 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamCollatorInterface.h -rw-r--r-- root/root 1383 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamFileDecoder.h -rw-r--r-- root/root 2146 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamFileHeader.h -rw-r--r-- root/root 1414 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamFlagBase.h -rw-r--r-- root/root 1794 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamHeaderInfo.h -rw-r--r-- root/root 6321 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamSingleAlignment.h -rw-r--r-- root/root 2128 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BamWriter.h -rw-r--r-- root/root 2960 2021-12-05 19:59 ./usr/include/bambamc/BamBam_BgzfCompressor.h -rw-r--r-- root/root 2813 2021-12-05 19:59 ./usr/include/bambamc/BamBam_CharBuffer.h -rw-r--r-- root/root 1178 2021-12-05 19:59 ./usr/include/bambamc/BamBam_Chromosome.h -rw-r--r-- root/root 979 2021-12-05 19:59 ./usr/include/bambamc/BamBam_CollatorState.h -rw-r--r-- root/root 836 2021-12-05 19:59 ./usr/include/bambamc/BamBam_Config.h -rw-r--r-- root/root 1241 2021-12-05 19:59 ./usr/include/bambamc/BamBam_FastQRead.h -rw-r--r-- root/root 1133 2021-12-05 19:59 ./usr/include/bambamc/BamBam_FormatAlignment.h -rw-r--r-- root/root 1233 2021-12-05 19:59 ./usr/include/bambamc/BamBam_FormatNumber.h -rw-r--r-- root/root 1362 2021-12-05 19:59 ./usr/include/bambamc/BamBam_GzipFileDecoder.h -rw-r--r-- root/root 1618 2021-12-05 19:59 ./usr/include/bambamc/BamBam_GzipReader.h -rw-r--r-- root/root 1623 2021-12-05 19:59 ./usr/include/bambamc/BamBam_GzipWriter.h -rw-r--r-- root/root 1096 2021-12-05 19:59 ./usr/include/bambamc/BamBam_Hash.h -rw-r--r-- root/root 1516 2021-12-05 19:59 ./usr/include/bambamc/BamBam_LineBuffer.h -rw-r--r-- root/root 1365 2021-12-05 19:59 ./usr/include/bambamc/BamBam_LineParsing.h -rw-r--r-- root/root 1468 2021-12-05 19:59 ./usr/include/bambamc/BamBam_List.h -rw-r--r-- root/root 1659 2021-12-05 19:59 ./usr/include/bambamc/BamBam_ListNode.h -rw-r--r-- root/root 1026 2021-12-05 19:59 ./usr/include/bambamc/BamBam_MergeHeapEntry.h -rw-r--r-- root/root 1440 2021-12-05 19:59 ./usr/include/bambamc/BamBam_SamBamFileDecoder.h -rw-r--r-- root/root 1753 2021-12-05 19:59 ./usr/include/bambamc/BamBam_SamFileDecoder.h -rw-r--r-- root/root 2181 2021-12-05 19:59 ./usr/include/bambamc/BamBam_SamInfo.h -rw-r--r-- root/root 942 2021-12-05 19:59 ./usr/include/bambamc/BamBam_StrDup.h -rw-r--r-- root/root 980 2021-12-05 19:59 ./usr/include/bambamc/BamBam_Unused.h drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/lib/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 190694 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/libbambamc.a lrwxrwxrwx root/root 0 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/libbambamc.so -> libbambamc.so.0.0.50 drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 221 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/pkgconfig/bambamc.pc drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/doc/libbambamc-dev/ lrwxrwxrwx root/root 0 2021-12-05 19:59 ./usr/share/doc/libbambamc-dev/changelog.Debian.gz -> ../libbambamc0/changelog.Debian.gz -rw-r--r-- root/root 1517 2021-12-05 19:59 ./usr/share/doc/libbambamc-dev/copyright libbambamc0_0.0.50-6_amd64.deb ------------------------------ new Debian package, version 2.0. size 39372 bytes: control archive=825 bytes. 697 bytes, 16 lines control 230 bytes, 3 lines md5sums 37 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libbambamc0 Source: bambamc Version: 0.0.50-6 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 109 Depends: libc6 (>= 2.33), zlib1g (>= 1:1.2.0.2) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/gt1/bambamc Description: Runtime library for reading and writing BAM (genome alignment) files The BAM Format is a binary format for storing sequence data. This is a lightweight C implementation of the read name collation code from the larger bambam C++ project to handle BAM file input and BAM file output. drwxr-xr-x root/root 0 2021-12-05 19:59 ./ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/lib/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/libbambamc.so.0 -> libbambamc.so.0.0.50 -rw-r--r-- root/root 96720 2021-12-05 19:59 ./usr/lib/x86_64-linux-gnu/libbambamc.so.0.0.50 drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-12-05 19:59 ./usr/share/doc/libbambamc0/ -rw-r--r-- root/root 720 2021-12-05 19:59 ./usr/share/doc/libbambamc0/changelog.Debian.gz -rw-r--r-- root/root 1517 2021-12-05 19:59 ./usr/share/doc/libbambamc0/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: n/a Build-Time: 21 Distribution: jammy-proposed Host Architecture: amd64 Install-Time: 6 Job: bambamc_0.0.50-6.dsc Machine Architecture: amd64 Package: bambamc Package-Time: 27 Source-Version: 0.0.50-6 Space: n/a Status: successful Version: 0.0.50-6 -------------------------------------------------------------------------------- Finished at 2021-12-06T05:17:41Z Build needed 00:00:27, no disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22593627 Scanning for processes to kill in build PACKAGEBUILD-22593627