Ubuntu
bamtools package

bamtools 2.4.1+dfsg-2 source package in Ubuntu

Changelog

bamtools (2.4.1+dfsg-2) unstable; urgency=medium

  * Team upload.
  
  [ Nadiya Sitdykova ]
  * add autopkgtest test-suite 

  [ Afif Elghraoui ]
  * remove unused lintian overrides

  [ Steffen Moeller ]
  * debian/upstream/metadata: Added refs to bio.tools and OMICtools
  * debian/copyright: Corrected case of upstream name
  * debian/control: Updated policy compliance to 4.0.1

 -- Nadiya Sitdykova <email address hidden>  Mon, 07 Aug 2017 17:01:19 -0400

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Bionic release universe misc

Downloads

File Size SHA-256 Checksum
bamtools_2.4.1+dfsg-2.dsc 2.4 KiB 68c9e96550c1307a22c5b50c89110ec2b05d4f37405af24459cfda238e9cf336
bamtools_2.4.1+dfsg.orig.tar.gz 197.4 KiB 4163623ec7f841b16c80bd46e5d3420852b879bc255a034f4e479db2d27dfa07
bamtools_2.4.1+dfsg-2.debian.tar.xz 11.5 KiB 969a196e95eb3b1bef7af771a3341d2f66e1f76ef6c544bf56ee3a40e7703510

Available diffs

No changes file available.

Binary packages built by this source

bamtools: toolkit for manipulating BAM (genome alignment) files

 BamTools facilitates research analysis and data management using BAM
 files. It copes with the enormous amount of data produced by current
 sequencing technologies that is typically stored in compressed, binary
 formats that are not easily handled by the text-based parsers commonly
 used in bioinformatics research.
 .
 BamTools provides both a C++ API for BAM file support as well as a
 command-line toolkit.
 .
 This is the bamtools command-line toolkit.
 .
 Available bamtools commands:
  convert Converts between BAM and a number of other formats
  count Prints number of alignments in BAM file(s)
  coverage Prints coverage statistics from the input BAM file
  filter Filters BAM file(s) by user-specified criteria
  header Prints BAM header information
  index Generates index for BAM file
  merge Merge multiple BAM files into single file
  random Select random alignments from existing BAM file(s), intended more
           as a testing tool.
  resolve Resolves paired-end reads (marking the IsProperPair flag as needed)
  revert Removes duplicate marks and restores original base qualities
  sort Sorts the BAM file according to some criteria
  split Splits a BAM file on user-specified property, creating a new BAM
           output file for each value found
  stats Prints some basic statistics from input BAM file(s)

bamtools-dbgsym: No summary available for bamtools-dbgsym in ubuntu cosmic.

No description available for bamtools-dbgsym in ubuntu cosmic.

libbamtools-dev: No summary available for libbamtools-dev in ubuntu artful.

No description available for libbamtools-dev in ubuntu artful.

libbamtools-doc: docs for dynamic library for manipulating BAM (genome alignment) files

 BamTools facilitates research analysis and data management using BAM
 files. It copes with the enormous amount of data produced by current
 sequencing technologies that is typically stored in compressed, binary
 formats that are not easily handled by the text-based parsers commonly
 used in bioinformatics research.
 .
 BamTools provides both a C++ API for BAM file support as well as a
 command-line toolkit.
 .
 This is the documentation for the library.

libbamtools2.4.0: dynamic library for manipulating BAM (genome alignment) files

 BamTools facilitates research analysis and data management using BAM
 files. It copes with the enormous amount of data produced by current
 sequencing technologies that is typically stored in compressed, binary
 formats that are not easily handled by the text-based parsers commonly
 used in bioinformatics research.
 .
 BamTools provides both a C++ API for BAM file support as well as a
 command-line toolkit.
 .
 This is the runtime library.

libbamtools2.4.0-dbgsym: No summary available for libbamtools2.4.0-dbgsym in ubuntu cosmic.

No description available for libbamtools2.4.0-dbgsym in ubuntu cosmic.