https://launchpad.net/ubuntu/+source/barclay/2.1.0-3/+build/16295201 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lcy01-amd64-024 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 18 Jan 23:26:14 ntpdate[1801]: adjust time server 10.211.37.1 offset -0.000277 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16295201 /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-16295201 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16295201 Starting target for build PACKAGEBUILD-16295201 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16295201 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16295201 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16295201 Updating target for build PACKAGEBUILD-16295201 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1008 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8982 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5198 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [158 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [68.5 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [575 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [310 kB] Fetched 17.3 MB in 3s (6542 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libreadline8 The following packages will be upgraded: apt bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils coreutils cpp-8 dash debconf dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++-8 gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libitm1 liblsan0 liblz4-1 libmount1 libmpfr6 libmpx2 libpng16-16 libquadmath0 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libtsan0 libubsan1 libuuid1 libzstd1 linux-libc-dev mount readline-common sed tar tzdata 73 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 44.6 MB of archives. After this operation, 702 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 bash amd64 5.0-1ubuntu1 [643 kB] Get:2 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 bsdutils amd64 1:2.33.1-0.1ubuntu1 [63.6 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 coreutils amd64 8.30-1ubuntu1 [1243 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-4 [242 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:6 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 debconf all 1.5.70 [122 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-4ubuntu1 [85.8 kB] Get:8 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 findutils amd64 4.6.0+git+20190105-2 [329 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.3-1 [149 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 gzip amd64 1.9-3 [93.8 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libubsan1 amd64 8.2.0-14ubuntu1 [121 kB] Get:15 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtsan0 amd64 8.2.0-14ubuntu1 [288 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8-base amd64 8.2.0-14ubuntu1 [18.6 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc1 amd64 1:8.2.0-14ubuntu1 [40.8 kB] Get:18 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgomp1 amd64 8.2.0-14ubuntu1 [76.4 kB] Get:19 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libitm1 amd64 8.2.0-14ubuntu1 [28.1 kB] Get:20 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libatomic1 amd64 8.2.0-14ubuntu1 [9056 B] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libasan5 amd64 8.2.0-14ubuntu1 [364 kB] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblsan0 amd64 8.2.0-14ubuntu1 [132 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmpx2 amd64 8.2.0-14ubuntu1 [11.7 kB] Get:24 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libquadmath0 amd64 8.2.0-14ubuntu1 [134 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 cpp-8 amd64 8.2.0-14ubuntu1 [7225 kB] Get:26 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcc1-0 amd64 8.2.0-14ubuntu1 [39.4 kB] Get:27 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++-8 amd64 8.2.0-14ubuntu1 [8116 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8 amd64 8.2.0-14ubuntu1 [8008 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc-8-dev amd64 8.2.0-14ubuntu1 [2303 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++-8-dev amd64 8.2.0-14ubuntu1 [1539 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++6 amd64 8.2.0-14ubuntu1 [398 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr6 amd64 4.0.2~rc1-1 [240 kB] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libbinutils amd64 2.31.1-11ubuntu1 [484 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-common amd64 2.31.1-11ubuntu1 [194 kB] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils amd64 2.31.1-11ubuntu1 [3396 B] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-11ubuntu1 [1829 kB] Get:37 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblz4-1 amd64 1.8.3-1ubuntu1 [71.7 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 libzstd1 amd64 1.3.8+dfsg-3 [226 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha3 [816 kB] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgpg-error0 amd64 1.33-3 [57.4 kB] Get:41 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgv amd64 2.2.12-1ubuntu2 [198 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 apt amd64 1.8.0~alpha3 [1165 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libuuid1 amd64 2.33.1-0.1ubuntu1 [20.9 kB] Get:46 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libblkid1 amd64 2.33.1-0.1ubuntu1 [133 kB] Get:47 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmount1 amd64 2.33.1-0.1ubuntu1 [146 kB] Get:48 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsmartcols1 amd64 2.33.1-0.1ubuntu1 [92.2 kB] Get:49 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 mount amd64 2.33.1-0.1ubuntu1 [113 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56+nmu1 [6080 B] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libfdisk1 amd64 2.33.1-0.1ubuntu1 [173 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 fdisk amd64 2.33.1-0.1ubuntu1 [118 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-2 [11.0 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-2 [7016 B] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-2 [85.2 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.2 kB] Get:59 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 readline-common all 8.0-1 [53.4 kB] Get:60 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libreadline8 amd64 8.0-1 [130 kB] Get:61 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-1build1 [530 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018i-1 [189 kB] Get:63 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm6 amd64 1.18.1-2build1 [27.6 kB] Get:64 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpng16-16 amd64 1.6.36-3 [179 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:69 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg amd64 2.2.12-1ubuntu2 [475 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgconf amd64 2.2.12-1ubuntu2 [123 kB] Get:71 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg-agent amd64 2.2.12-1ubuntu2 [230 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:73 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm-compat4 amd64 1.18.1-2build1 [6168 B] Get:74 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-9.10 [1041 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 44.6 MB in 1s (46.9 MB/s) (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bash_5.0-1ubuntu1_amd64.deb ... Unpacking bash (5.0-1ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-1ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu1_amd64.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu1) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_amd64.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-4_amd64.deb ... Unpacking tar (1.30+dfsg-4) over (1.30+dfsg-3) ... Setting up tar (1.30+dfsg-4) ... 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RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16295201 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-16295201 --arch=amd64 --dist=disco-proposed --nolog -A barclay_2.1.0-3.dsc Initiating build PACKAGEBUILD-16295201 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-024.buildd +==============================================================================+ | barclay 2.1.0-3 (amd64) 18 Jan 2019 23:26 | +==============================================================================+ Package: barclay Version: 2.1.0-3 Source Version: 2.1.0-3 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/barclay-D8aqTh/barclay-2.1.0' with '<>' I: NOTICE: Log filtering will replace 'build/barclay-D8aqTh' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16295201/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- barclay_2.1.0-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-iM0IaU/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-iM0IaU/apt_archive ./ InRelease Get:2 copy:/<>/resolver-iM0IaU/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-iM0IaU/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-iM0IaU/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-iM0IaU/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (261 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-iM0IaU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12684 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: default-jdk (>= 2:1.9~), debhelper (>= 11~), javahelper, gradle-debian-helper, maven-repo-helper, libfreemarker-java, libjoptsimple-java, liblog4j2-java, libgoogle-gson-java, libmockito-java, testng, libjacoco-java, default-jdk-doc Filtered Build-Depends: default-jdk (>= 2:1.9~), debhelper (>= 11~), javahelper, gradle-debian-helper, maven-repo-helper, libfreemarker-java, libjoptsimple-java, liblog4j2-java, libgoogle-gson-java, libmockito-java, testng, libjacoco-java, default-jdk-doc dpkg-deb: building package 'sbuild-build-depends-barclay-dummy' in '/<>/resolver-eqOBFs/apt_archive/sbuild-build-depends-barclay-dummy.deb'. Ign:1 copy:/<>/resolver-eqOBFs/apt_archive ./ InRelease Get:2 copy:/<>/resolver-eqOBFs/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-eqOBFs/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-eqOBFs/apt_archive ./ Sources [309 B] Get:5 copy:/<>/resolver-eqOBFs/apt_archive ./ Packages [633 B] Fetched 3061 B in 0s (210 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install barclay build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: adwaita-icon-theme ant ant-optional antlr autoconf automake autopoint autotools-dev bnd bsdmainutils ca-certificates-java dbus dbus-user-session dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk default-jdk-doc default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dirmngr dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking glib-networking-common glib-networking-services gnupg gnupg-l10n gnupg-utils gpg-wks-client gpg-wks-server gpgsm gradle gradle-debian-helper groff-base groovy gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian ivy java-common java-wrappers javahelper junit4 libantlr-java libaopalliance-java libapache-pom-java libarchive-zip-perl libasm-java libasn1-8-heimdal libasound2 libasound2-data libatinject-jsr330-api-java libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbcel-java libbcpg-java libbcprov-java libbsd0 libbsf-java libbsh-java libcairo-gobject2 libcairo2 libcdi-api-java libcglib-java libclass-method-modifiers-perl libcolord2 libcommons-cli-java libcommons-codec-java libcommons-collections3-java libcommons-compress-java libcommons-io-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-parent-java libcroco3 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdd-plist-java libdevel-callchecker-perl libdevel-globaldestruction-perl libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1 libencode-locale-perl libepoxy0 libexpat1 libfelix-framework-java libfelix-gogo-runtime-java libfelix-resolver-java libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libfindbugs-java libfontconfig1 libfreemarker-java libfreetype6 libfribidi0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java libgradle-core-java libgradle-plugins-java libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgtk-3-0 libgtk-3-common libguava-java libguice-java libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhttpclient-java libhttpcore-java libhx509-5-heimdal libicu63 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjacoco-java libjansi-java libjansi-native-java libjarjar-java libjatl-java libjavaewah-java libjaxen-java libjbig0 libjcifs-java libjcip-annotations-java libjcommander-java libjformatstring-java libjgit-java libjline2-java libjna-java libjna-jni libjoptsimple-java libjpeg-turbo8 libjpeg8 libjs-jquery libjsch-java libjson-glib-1.0-0 libjson-glib-1.0-common libjsoup-java libjsr305-java libjzlib-java libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libkryo-java libksba8 liblcms2-2 libldap-2.4-2 libldap-common liblightcouch-java libllvm7 liblog4j2-java liblogback-java liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmaven-parent-java libmaven-resolver-java libmaven-shared-utils-java libmaven3-core-java libminlog-java libmockito-java libmodule-runtime-perl libmoo-perl libmpdec2 libnative-platform-java libnative-platform-jni libnekohtml-java libnet-http-perl libnet-ssleay-perl libnspr4 libnss3 libobjenesis-java libosgi-annotation-java libosgi-compendium-java libosgi-core-java libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libplexus-cipher-java libplexus-classworlds-java libplexus-component-annotations-java libplexus-container-default-java libplexus-container-default1.5-java libplexus-interpolation-java libplexus-sec-dispatcher-java libplexus-utils2-java libpolyglot-maven-java libproxy1v5 libpsl5 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqdox-java libreflectasm-java librest-0.7-0 librhino-java libroken18-heimdal librole-tiny-perl librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libservlet3.1-java libsigsegv2 libsimple-http-java libsisu-inject-java libsisu-plexus-java libslf4j-java libsoup-gnome2.4-1 libsoup2.4-1 libstrictures-perl libsub-exporter-progressive-perl libsub-quote-perl libthai-data libthai0 libtiff5 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwagon-file-java libwagon-http-java libwagon-provider-api-java libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwind0-heimdal libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxstream-java libxtst6 libxxf86vm1 libxz-java libyaml-snake-java m4 man-db maven-repo-helper mime-support netbase openjdk-11-doc openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre openjdk-11-jre-headless patchutils perl-openssl-defaults po-debconf python3 python3-minimal python3.7 python3.7-minimal shared-mime-info testng ubuntu-mono ucf unzip wdiff x11-common xkb-data Suggested packages: ant-doc javacc junit jython libactivation-java libcommons-net-java libmail-java libjaxp1.3-java libjdepend-java liblog4j1.2-java liboro-java libregexp-java libxalan2-java autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation debtags dh-make adequate autopkgtest bls-standalone bsd-mailx | mailx check-all-the-things cvs-buildpackage devscripts-el diffoscope disorderfs dose-extra duck faketime gnuplot how-can-i-help libauthen-sasl-perl libdbd-pg-perl libfile-desktopentry-perl libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts mutt piuparts postgresql-client quilt ratt reprotest ssh-client svn-buildpackage w3m debian-keyring equivs libsoap-lite-perl pinentry-gnome3 tor gettext-doc libasprintf-dev libgettextpo-dev parcimonie xloadimage gradle-doc groff groovy-doc ivy-doc libjsch-agent-proxy-java cvs gawk tofrodos libaopalliance-java-doc libasound2-plugins alsa-utils libatinject-jsr330-api-java-doc libbcel-java-doc libbcpg-java-doc libbcprov-java-doc bsh rhino colord libcommons-collections3-java-doc libcommons-io-java-doc libcommons-lang-java-doc libcommons-lang3-java-doc libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java cups-common libdom4j-java-doc libmsv-java libxpp2-java libfelix-framework-java-doc libfelix-gogo-runtime-java-doc libjdom1-java libgoogle-gson-java-doc krb5-doc krb5-user gvfs libdata-dump-perl libjavaewah-java-doc libxom-java libjcifs-java-doc libjcommander-java-doc libjgit-java-doc libjna-java-doc libjoptsimple-java-doc libjsoup-java-doc libjsr305-java-doc liblcms2-utils liblog4j2-java-doc libjanino-java libjetty9-java libtomcat9-java libcrypt-ssleay-perl libmaven-shared-utils-java-doc libnative-platform-java-doc libnekohtml-java-doc libobjenesis-java-doc libosgi-annotation-java-doc libosgi-compendium-java-doc libosgi-core-java-doc libscalar-number-perl pciutils pcscd libplexus-cipher-java-doc libplexus-classworlds-java-doc libplexus-interpolation-java-doc libplexus-sec-dispatcher-java-doc libplexus-utils2-java-doc libpolyglot-maven-java-doc libqdox-java-doc librsvg2-bin lm-sensors libsimple-http-java-doc libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libauthen-ntlm-perl libxerces2-java-doc libxml-commons-resolver1.1-java-doc libcglib-nodep-java libjdom2-java libjettison-java libjoda-time-java libkxml2-java libwoodstox-java m4-doc apparmor less www-browser maven-debian-helper openjdk-11-demo openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk python3-venv python3.7-venv python3.7-doc binfmt-support zip wdiff-doc Recommended packages: libbindex-java at dput | dupload libdistro-info-perl libgit-wrapper-perl libgitlab-api-v4-perl liblist-compare-perl libstring-shellquote-perl licensecheck lintian python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace wget | curl curl | wget | lynx libgpars-groovy-java at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgtk-3-bin libhtml-format-perl javascript-common krb5-locales libclass-xsaccessor-perl libsub-name-perl publicsuffix libsasl2-modules libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl The following NEW packages will be installed: adwaita-icon-theme ant ant-optional antlr autoconf automake autopoint autotools-dev bnd bsdmainutils ca-certificates-java dbus dbus-user-session dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk default-jdk-doc default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dirmngr dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking glib-networking-common glib-networking-services gnupg gnupg-l10n gnupg-utils gpg-wks-client gpg-wks-server gpgsm gradle gradle-debian-helper groff-base groovy gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian ivy java-common java-wrappers javahelper junit4 libantlr-java libaopalliance-java libapache-pom-java libarchive-zip-perl libasm-java libasn1-8-heimdal libasound2 libasound2-data libatinject-jsr330-api-java libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbcel-java libbcpg-java libbcprov-java libbsd0 libbsf-java libbsh-java libcairo-gobject2 libcairo2 libcdi-api-java libcglib-java libclass-method-modifiers-perl libcolord2 libcommons-cli-java libcommons-codec-java libcommons-collections3-java libcommons-compress-java libcommons-io-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-parent-java libcroco3 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdd-plist-java libdevel-callchecker-perl libdevel-globaldestruction-perl libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1 libencode-locale-perl libepoxy0 libexpat1 libfelix-framework-java libfelix-gogo-runtime-java libfelix-resolver-java libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libfindbugs-java libfontconfig1 libfreemarker-java libfreetype6 libfribidi0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgoogle-gson-java libgradle-core-java libgradle-plugins-java libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgtk-3-0 libgtk-3-common libguava-java libguice-java libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhttpclient-java libhttpcore-java libhx509-5-heimdal libicu63 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjacoco-java libjansi-java libjansi-native-java libjarjar-java libjatl-java libjavaewah-java libjaxen-java libjbig0 libjcifs-java libjcip-annotations-java libjcommander-java libjformatstring-java libjgit-java libjline2-java libjna-java libjna-jni libjoptsimple-java libjpeg-turbo8 libjpeg8 libjs-jquery libjsch-java libjson-glib-1.0-0 libjson-glib-1.0-common libjsoup-java libjsr305-java libjzlib-java libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libkryo-java libksba8 liblcms2-2 libldap-2.4-2 libldap-common liblightcouch-java libllvm7 liblog4j2-java liblogback-java liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmaven-parent-java libmaven-resolver-java libmaven-shared-utils-java libmaven3-core-java libminlog-java libmockito-java libmodule-runtime-perl libmoo-perl libmpdec2 libnative-platform-java libnative-platform-jni libnekohtml-java libnet-http-perl libnet-ssleay-perl libnspr4 libnss3 libobjenesis-java libosgi-annotation-java libosgi-compendium-java libosgi-core-java libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libplexus-cipher-java libplexus-classworlds-java libplexus-component-annotations-java libplexus-container-default-java libplexus-container-default1.5-java libplexus-interpolation-java libplexus-sec-dispatcher-java libplexus-utils2-java libpolyglot-maven-java libproxy1v5 libpsl5 libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqdox-java libreflectasm-java librest-0.7-0 librhino-java libroken18-heimdal librole-tiny-perl librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libservlet3.1-java libsigsegv2 libsimple-http-java libsisu-inject-java libsisu-plexus-java libslf4j-java libsoup-gnome2.4-1 libsoup2.4-1 libstrictures-perl libsub-exporter-progressive-perl libsub-quote-perl libthai-data libthai0 libtiff5 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwagon-file-java libwagon-http-java libwagon-provider-api-java libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwind0-heimdal libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxstream-java libxtst6 libxxf86vm1 libxz-java libyaml-snake-java m4 man-db maven-repo-helper mime-support netbase openjdk-11-doc openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre openjdk-11-jre-headless patchutils perl-openssl-defaults po-debconf python3 python3-minimal python3.7 python3.7-minimal sbuild-build-depends-barclay-dummy shared-mime-info testng ubuntu-mono ucf unzip wdiff x11-common xkb-data 0 upgraded, 361 newly installed, 0 to remove and 1 not upgraded. Need to get 408 MB of archives. After this operation, 1216 MB of additional disk space will be used. 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disco/main amd64 libdrm-common all 2.4.95-1 [5000 B] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm2 amd64 2.4.95-1 [30.6 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 libedit2 amd64 3.1-20181209-1 [85.9 kB] Get:44 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkrb5support0 amd64 1.17-1 [33.3 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libk5crypto3 amd64 1.17-1 [85.8 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libkeyutils1 amd64 1.5.9-9.3 [9640 B] Get:47 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libkrb5-3 amd64 1.17-1 [329 kB] Get:48 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgssapi-krb5-2 amd64 1.17-1 [123 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libpsl5 amd64 0.20.2-2 [50.0 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 hicolor-icon-theme all 0.17-2 [9976 B] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8 amd64 2.0.1-0ubuntu1 [117 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libjbig0 amd64 2.1-3.1build1 [26.7 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libwebp6 amd64 0.6.1-2 [185 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 libtiff5 amd64 4.0.10-3 [157 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [6080 B] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-0 amd64 2.38.0+dfsg-7 [170 kB] Get:58 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gtk-update-icon-cache amd64 3.24.3-1ubuntu1 [27.2 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6 amd64 2.9.1-3 [335 kB] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig-config all 2.13.0-5ubuntu3 [28.4 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libfontconfig1 amd64 2.13.0-5ubuntu3 [112 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libpixman-1-0 amd64 0.36.0-1 [229 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render0 amd64 1.13.1-2 [14.8 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shm0 amd64 1.13.1-2 [5548 B] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo2 amd64 1.16.0-2 [585 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-3 [81.4 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig amd64 2.13.0-5ubuntu3 [170 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main amd64 libthai-data all 0.1.28-1 [134 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 libdatrie1 amd64 0.2.12-1 [18.3 kB] 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Get:102 http://ftpmaster.internal/ubuntu disco/universe amd64 libantlr-java all 2.7.7+dfsg-9.2build2 [450 kB] Get:103 http://ftpmaster.internal/ubuntu disco/universe amd64 antlr all 2.7.7+dfsg-9.2build2 [5092 B] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 m4 amd64 1.4.18-2 [199 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main amd64 autoconf all 2.69-11 [322 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main amd64 automake all 1:1.16.1-4 [522 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 autopoint all 0.19.8.1-9 [412 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 unzip amd64 6.0-21ubuntu1 [167 kB] Get:111 http://ftpmaster.internal/ubuntu disco/universe amd64 java-wrappers all 0.3 [9560 B] Get:112 http://ftpmaster.internal/ubuntu disco/universe amd64 libhamcrest-java all 1.3-7 [388 kB] Get:113 http://ftpmaster.internal/ubuntu disco/universe amd64 junit4 all 4.12-8 [290 kB] Get:114 http://ftpmaster.internal/ubuntu disco/universe amd64 libfelix-framework-java all 4.6.1-2 [526 kB] Get:115 http://ftpmaster.internal/ubuntu disco/universe amd64 libfelix-gogo-runtime-java all 0.16.2-1 [110 kB] Get:116 http://ftpmaster.internal/ubuntu disco/universe amd64 libosgi-annotation-java all 6.0.0-2 [3734 B] Get:117 http://ftpmaster.internal/ubuntu disco/universe amd64 libosgi-core-java all 6.0.0-1 [147 kB] Get:118 http://ftpmaster.internal/ubuntu disco/universe amd64 libfelix-resolver-java all 1.14.0-1 [175 kB] Get:119 http://ftpmaster.internal/ubuntu disco/universe amd64 libosgi-compendium-java all 6.0.0-1 [244 kB] Get:120 http://ftpmaster.internal/ubuntu disco/universe amd64 libslf4j-java all 1.7.25-3 [141 kB] Get:121 http://ftpmaster.internal/ubuntu disco/universe amd64 libxz-java all 1.8-2 [140 kB] Get:122 http://ftpmaster.internal/ubuntu disco/universe amd64 libyaml-snake-java all 1.23-1 [270 kB] Get:123 http://ftpmaster.internal/ubuntu disco/universe amd64 bnd all 3.5.0-4 [7600 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 dbus-user-session amd64 1.12.10-1ubuntu2 [9428 B] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 libdconf1 amd64 0.30.1-2 [35.9 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main amd64 dconf-service amd64 0.30.1-2 [29.2 kB] Get:127 http://ftpmaster.internal/ubuntu disco/main amd64 dconf-gsettings-backend amd64 0.30.1-2 [21.9 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] Get:129 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtool all 2.4.6-8 [195 kB] Get:130 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 1.1.0-1 [13.6 kB] Get:133 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 1.1.0-1 [5100 B] Get:134 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-3 [78.1 kB] Get:135 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-9 [896 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:138 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 12ubuntu1 [887 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 libatk1.0-data all 2.30.0-2 [3032 B] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 libatk1.0-0 amd64 2.30.0-2 [44.5 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 libatspi2.0-0 amd64 2.30.0-5 [59.8 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 libatk-bridge2.0-0 amd64 2.30.0-2 [56.8 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo-gobject2 amd64 1.16.0-2 [17.2 kB] Get:144 http://ftpmaster.internal/ubuntu disco/main amd64 libcolord2 amd64 1.4.3-3 [131 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main amd64 libepoxy0 amd64 1.5.3-0.1 [188 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main amd64 libjson-glib-1.0-common all 1.4.4-2 [3496 B] Get:147 http://ftpmaster.internal/ubuntu disco/main amd64 libjson-glib-1.0-0 amd64 1.4.4-2 [58.8 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 libproxy1v5 amd64 0.4.15-5 [50.4 kB] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 glib-networking-common all 2.58.0-2 [3580 B] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 glib-networking-services amd64 2.58.0-2 [8920 B] Get:151 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gsettings-desktop-schemas all 3.31.0.2-2ubuntu1 [28.1 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main amd64 glib-networking amd64 2.58.0-2 [48.0 kB] Get:153 http://ftpmaster.internal/ubuntu disco/main amd64 libsoup2.4-1 amd64 2.64.2-2 [240 kB] Get:154 http://ftpmaster.internal/ubuntu disco/main amd64 libsoup-gnome2.4-1 amd64 2.64.2-2 [5156 B] Get:155 http://ftpmaster.internal/ubuntu disco/main amd64 librest-0.7-0 amd64 0.8.1-1 [32.2 kB] Get:156 http://ftpmaster.internal/ubuntu disco/main amd64 libwayland-client0 amd64 1.16.0-1ubuntu2 [23.6 kB] Get:157 http://ftpmaster.internal/ubuntu disco/main amd64 libwayland-cursor0 amd64 1.16.0-1ubuntu2 [9960 B] Get:158 http://ftpmaster.internal/ubuntu disco/main amd64 libwayland-egl1 amd64 1.16.0-1ubuntu2 [5588 B] Get:159 http://ftpmaster.internal/ubuntu disco/main amd64 libxcomposite1 amd64 1:0.4.4-2 [6988 B] Get:160 http://ftpmaster.internal/ubuntu disco/main amd64 libxfixes3 amd64 1:5.0.3-1 [10.8 kB] Get:161 http://ftpmaster.internal/ubuntu disco/main amd64 libxcursor1 amd64 1:1.1.15-2 [19.8 kB] Get:162 http://ftpmaster.internal/ubuntu disco/main amd64 libxdamage1 amd64 1:1.1.4-3 [6934 B] Get:163 http://ftpmaster.internal/ubuntu disco/main amd64 libxinerama1 amd64 2:1.1.4-1 [7080 B] Get:164 http://ftpmaster.internal/ubuntu disco/main amd64 libxkbcommon0 amd64 0.8.2-1 [97.8 kB] Get:165 http://ftpmaster.internal/ubuntu disco/main amd64 libxrandr2 amd64 2:1.5.1-1 [18.1 kB] Get:166 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgtk-3-common all 3.24.3-1ubuntu1 [230 kB] Get:167 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgtk-3-0 amd64 3.24.3-1ubuntu1 [2535 kB] Get:168 http://ftpmaster.internal/ubuntu disco/main amd64 libglvnd0 amd64 1.1.0-1 [47.6 kB] Get:169 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libglapi-mesa amd64 18.3.2-1ubuntu1 [26.1 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-xcb1 amd64 2:1.6.7-1 [9204 B] Get:171 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri2-0 amd64 1.13.1-2 [6892 B] Get:172 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri3-0 amd64 1.13.1-2 [6488 B] Get:173 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-glx0 amd64 1.13.1-2 [21.9 kB] Get:174 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-present0 amd64 1.13.1-2 [5544 B] Get:175 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-sync1 amd64 1.13.1-2 [8832 B] Get:176 http://ftpmaster.internal/ubuntu disco/main amd64 libxshmfence1 amd64 1.3-1 [5028 B] Get:177 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-amdgpu1 amd64 2.4.95-1 [17.4 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main amd64 libpciaccess0 amd64 0.14-1 [17.9 kB] Get:179 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-intel1 amd64 2.4.95-1 [60.0 kB] Get:180 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-nouveau2 amd64 2.4.95-1 [16.5 kB] Get:181 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-radeon1 amd64 2.4.95-1 [21.4 kB] Get:182 http://ftpmaster.internal/ubuntu disco/main amd64 libllvm7 amd64 1:7.0.1-4 [13.0 MB] Get:183 http://ftpmaster.internal/ubuntu disco/main amd64 libsensors-config all 1:3.5.0-3 [6264 B] Get:184 http://ftpmaster.internal/ubuntu disco/main amd64 libsensors5 amd64 1:3.5.0-3 [27.3 kB] Get:185 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgl1-mesa-dri amd64 18.3.2-1ubuntu1 [7314 kB] Get:186 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libglx-mesa0 amd64 18.3.2-1ubuntu1 [141 kB] Get:187 http://ftpmaster.internal/ubuntu disco/main amd64 libglx0 amd64 1.1.0-1 [28.2 kB] Get:188 http://ftpmaster.internal/ubuntu disco/main amd64 libgl1 amd64 1.1.0-1 [88.7 kB] Get:189 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgl1-mesa-glx amd64 18.3.2-1ubuntu1 [5384 B] Get:190 http://ftpmaster.internal/ubuntu disco/main amd64 libgif7 amd64 5.1.4-3 [30.6 kB] Get:191 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openjdk-11-jre amd64 11.0.1+13-3ubuntu3.19.04.1 [34.5 kB] Get:192 http://ftpmaster.internal/ubuntu disco/main amd64 default-jre amd64 2:1.11-71 [1084 B] Get:193 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openjdk-11-jdk-headless amd64 11.0.1+13-3ubuntu3.19.04.1 [217 MB] Get:194 http://ftpmaster.internal/ubuntu disco/main amd64 default-jdk-headless amd64 2:1.11-71 [1144 B] Get:195 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openjdk-11-jdk amd64 11.0.1+13-3ubuntu3.19.04.1 [1629 kB] Get:196 http://ftpmaster.internal/ubuntu disco/main amd64 default-jdk amd64 2:1.11-71 [1096 B] Get:197 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 openjdk-11-doc all 11.0.1+13-3ubuntu3.19.04.1 [13.4 MB] Get:198 http://ftpmaster.internal/ubuntu disco/main amd64 default-jdk-doc amd64 2:1.11-71 [3288 B] Get:199 http://ftpmaster.internal/ubuntu disco/main amd64 libksba8 amd64 1.3.5-2 [92.6 kB] Get:200 http://ftpmaster.internal/ubuntu disco/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-2.1 [41.4 kB] Get:201 http://ftpmaster.internal/ubuntu disco/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-2.1 [182 kB] Get:202 http://ftpmaster.internal/ubuntu disco/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-2.1 [29.4 kB] Get:203 http://ftpmaster.internal/ubuntu disco/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-2.1 [86.7 kB] Get:204 http://ftpmaster.internal/ubuntu disco/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-2.1 [47.8 kB] Get:205 http://ftpmaster.internal/ubuntu disco/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-2.1 [107 kB] Get:206 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-2.1 [206 kB] Get:207 http://ftpmaster.internal/ubuntu disco/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-2.1 [14.8 kB] Get:208 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-2.1 [96.4 kB] Get:209 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsasl2-modules-db amd64 2.1.27~rc8-1 [14.3 kB] Get:210 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsasl2-2 amd64 2.1.27~rc8-1 [49.2 kB] Get:211 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libldap-common all 2.4.47+dfsg-2ubuntu1 [16.2 kB] Get:212 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-2ubuntu1 [154 kB] Get:213 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dirmngr amd64 2.2.12-1ubuntu2 [324 kB] Get:214 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gnupg-l10n all 2.2.12-1ubuntu2 [48.9 kB] Get:215 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gnupg-utils amd64 2.2.12-1ubuntu2 [473 kB] Get:216 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg-wks-client amd64 2.2.12-1ubuntu2 [95.9 kB] Get:217 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg-wks-server amd64 2.2.12-1ubuntu2 [89.2 kB] Get:218 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgsm amd64 2.2.12-1ubuntu2 [215 kB] Get:219 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gnupg all 2.2.12-1ubuntu2 [252 kB] Get:220 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] Get:221 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] Get:222 http://ftpmaster.internal/ubuntu disco/main amd64 libio-pty-perl amd64 1:1.08-1.1build5 [30.0 kB] Get:223 http://ftpmaster.internal/ubuntu disco/main amd64 libipc-run-perl all 20180523.0-1 [89.7 kB] Get:224 http://ftpmaster.internal/ubuntu disco/main amd64 libclass-method-modifiers-perl all 2.12-1 [15.7 kB] Get:225 http://ftpmaster.internal/ubuntu disco/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] Get:226 http://ftpmaster.internal/ubuntu disco/main amd64 libdevel-globaldestruction-perl all 0.14-1 [6752 B] Get:227 http://ftpmaster.internal/ubuntu disco/main amd64 libb-hooks-op-check-perl amd64 0.22-1build1 [10.1 kB] Get:228 http://ftpmaster.internal/ubuntu disco/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] Get:229 http://ftpmaster.internal/ubuntu disco/main amd64 libdevel-callchecker-perl amd64 0.007-2build2 [14.1 kB] Get:230 http://ftpmaster.internal/ubuntu disco/main amd64 libparams-classify-perl amd64 0.015-1build1 [21.0 kB] Get:231 http://ftpmaster.internal/ubuntu disco/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] Get:232 http://ftpmaster.internal/ubuntu disco/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] Get:233 http://ftpmaster.internal/ubuntu disco/main amd64 librole-tiny-perl all 2.000006-1 [15.9 kB] Get:234 http://ftpmaster.internal/ubuntu disco/main amd64 libstrictures-perl all 2.000005-1 [16.3 kB] Get:235 http://ftpmaster.internal/ubuntu disco/main amd64 libsub-quote-perl all 2.005001-1 [17.1 kB] Get:236 http://ftpmaster.internal/ubuntu disco/main amd64 libmoo-perl all 2.003004-2 [45.6 kB] Get:237 http://ftpmaster.internal/ubuntu disco/main amd64 libencode-locale-perl all 1.05-1 [12.3 kB] Get:238 http://ftpmaster.internal/ubuntu disco/main amd64 libtimedate-perl all 2.3000-2 [37.5 kB] Get:239 http://ftpmaster.internal/ubuntu disco/main amd64 libhttp-date-perl all 6.02-1 [10.4 kB] Get:240 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-listing-perl all 6.04-1 [9774 B] Get:241 http://ftpmaster.internal/ubuntu disco/main amd64 libhtml-tagset-perl all 3.20-3 [12.1 kB] Get:242 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liburi-perl all 1.76-1 [77.3 kB] Get:243 http://ftpmaster.internal/ubuntu disco/main amd64 libhtml-parser-perl amd64 3.72-3build2 [86.2 kB] Get:244 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libhtml-tree-perl all 5.07-2 [200 kB] Get:245 http://ftpmaster.internal/ubuntu disco/main amd64 libio-html-perl all 1.001-1 [14.9 kB] Get:246 http://ftpmaster.internal/ubuntu disco/main amd64 liblwp-mediatypes-perl all 6.02-1 [21.7 kB] Get:247 http://ftpmaster.internal/ubuntu disco/main amd64 libhttp-message-perl all 6.18-1 [75.3 kB] Get:248 http://ftpmaster.internal/ubuntu disco/main amd64 libhttp-cookies-perl all 6.04-1 [17.2 kB] Get:249 http://ftpmaster.internal/ubuntu disco/main amd64 libhttp-negotiate-perl all 6.01-1 [12.5 kB] Get:250 http://ftpmaster.internal/ubuntu disco/main amd64 perl-openssl-defaults amd64 3build1 [7012 B] Get:251 http://ftpmaster.internal/ubuntu disco/main amd64 libnet-ssleay-perl amd64 1.85-2ubuntu3 [283 kB] Get:252 http://ftpmaster.internal/ubuntu disco/main amd64 libio-socket-ssl-perl all 2.060-3 [173 kB] Get:253 http://ftpmaster.internal/ubuntu disco/main amd64 libnet-http-perl all 6.18-1 [22.8 kB] Get:254 http://ftpmaster.internal/ubuntu disco/main amd64 liblwp-protocol-https-perl all 6.07-2 [8284 B] Get:255 http://ftpmaster.internal/ubuntu disco/main amd64 libtry-tiny-perl all 0.30-1 [20.5 kB] Get:256 http://ftpmaster.internal/ubuntu disco/main amd64 libwww-robotrules-perl all 6.02-1 [12.6 kB] Get:257 http://ftpmaster.internal/ubuntu disco/main amd64 libwww-perl all 6.36-1 [138 kB] Get:258 http://ftpmaster.internal/ubuntu disco/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] Get:259 http://ftpmaster.internal/ubuntu disco/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] Get:260 http://ftpmaster.internal/ubuntu disco/main amd64 devscripts amd64 2.19.2 [933 kB] Get:261 http://ftpmaster.internal/ubuntu disco/universe amd64 ivy all 2.4.0-5 [1206 kB] Get:262 http://ftpmaster.internal/ubuntu disco/universe amd64 libasm-java all 7.0-1 [362 kB] Get:263 http://ftpmaster.internal/ubuntu disco/universe amd64 libbsf-java all 1:2.4.0-8 [73.6 kB] Get:264 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-cli-java all 1.4-1 [53.8 kB] Get:265 http://ftpmaster.internal/ubuntu disco/universe amd64 libapache-pom-java all 18-1 [4720 B] Get:266 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-parent-java all 43-1 [10.8 kB] Get:267 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-logging-java all 1.2-2 [60.3 kB] Get:268 http://ftpmaster.internal/ubuntu disco/universe amd64 libhawtjni-runtime-java all 1.15-3 [27.1 kB] Get:269 http://ftpmaster.internal/ubuntu disco/universe amd64 libjansi-native-java all 1.8-1 [23.8 kB] Get:270 http://ftpmaster.internal/ubuntu disco/universe amd64 libjansi-java all 1.16-1 [36.2 kB] Get:271 http://ftpmaster.internal/ubuntu disco/universe amd64 libjline2-java all 2.14.6-1 [150 kB] Get:272 http://ftpmaster.internal/ubuntu disco/universe amd64 libqdox-java all 1.12.1-3 [172 kB] Get:273 http://ftpmaster.internal/ubuntu disco/universe amd64 libservlet3.1-java all 8.5.34-1ubuntu1 [393 kB] Get:274 http://ftpmaster.internal/ubuntu disco/universe amd64 libxpp3-java all 1.1.4c-3 [292 kB] Get:275 http://ftpmaster.internal/ubuntu disco/universe amd64 libxstream-java all 1.4.11.1-1 [538 kB] Get:276 http://ftpmaster.internal/ubuntu disco/universe amd64 groovy all 2.4.16-1ubuntu1 [12.9 MB] Get:277 http://ftpmaster.internal/ubuntu disco/universe amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5348 B] Get:278 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-collections3-java all 3.2.2-2 [525 kB] Get:279 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-compress-java all 1.18-1 [517 kB] Get:280 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-io-java all 2.6-2 [198 kB] Get:281 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-lang-java all 2.6-8 [272 kB] Get:282 http://ftpmaster.internal/ubuntu disco/universe amd64 libjsr305-java all 0.1~+svn49-10 [26.5 kB] Get:283 http://ftpmaster.internal/ubuntu disco/universe amd64 libguava-java all 19.0-1 [2028 kB] Get:284 http://ftpmaster.internal/ubuntu disco/universe amd64 libcommons-codec-java all 1.11-1 [271 kB] Get:285 http://ftpmaster.internal/ubuntu disco/universe amd64 libhttpcore-java all 4.4.10-1 [605 kB] Get:286 http://ftpmaster.internal/ubuntu disco/universe amd64 libhttpclient-java all 4.5.6-1ubuntu1 [719 kB] Get:287 http://ftpmaster.internal/ubuntu disco/universe amd64 libjarjar-java all 1.4+svn142-9 [189 kB] Get:288 http://ftpmaster.internal/ubuntu disco/universe amd64 libjcip-annotations-java all 20060626-5 [11.6 kB] Get:289 http://ftpmaster.internal/ubuntu disco/universe amd64 libjna-jni amd64 4.5.2-1 [30.3 kB] Get:290 http://ftpmaster.internal/ubuntu disco/universe amd64 libjna-java all 4.5.2-1 [170 kB] Get:291 http://ftpmaster.internal/ubuntu disco/universe amd64 libjzlib-java all 1.1.3-2 [77.5 kB] Get:292 http://ftpmaster.internal/ubuntu disco/universe amd64 libjsch-java all 0.1.55-1 [283 kB] Get:293 http://ftpmaster.internal/ubuntu disco/universe amd64 libminlog-java all 1.3.0-1 [7650 B] Get:294 http://ftpmaster.internal/ubuntu disco/universe amd64 libobjenesis-java all 3.0.1-2 [51.4 kB] Get:295 http://ftpmaster.internal/ubuntu disco/universe amd64 libreflectasm-java all 1.05-4 [17.7 kB] Get:296 http://ftpmaster.internal/ubuntu disco/universe amd64 libkryo-java all 2.20-6 [151 kB] Get:297 http://ftpmaster.internal/ubuntu 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Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgoogle-gson-java (2.8.5-2) ... Setting up x11-common (1:7.7+19ubuntu8) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Processing triggers for ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Setting up hicolor-icon-theme (0.17-2) ... Setting up libxpp3-java (1.1.4c-3) ... Setting up libsub-quote-perl (2.005001-1) ... Setting up libaopalliance-java (20070526-6) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libwayland-cursor0:amd64 (1.16.0-1ubuntu2) ... Setting up libjna-jni (4.5.2-1) ... Setting up libpolyglot-maven-java (0.8~tobrien+git20120905-9) ... Setting up libgeronimo-annotation-1.3-spec-java (1.0-1) ... Setting up libwayland-egl1:amd64 (1.16.0-1ubuntu2) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libhamcrest-java (1.3-7) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libdbus-1-3:amd64 (1.12.10-1ubuntu2) ... Setting up libcommons-cli-java (1.4-1) ... Setting up libavahi-common-data:amd64 (0.7-4ubuntu4) ... Setting up libplexus-sec-dispatcher-java (1.4-4) ... Setting up netbase (5.5) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up libfile-stripnondeterminism-perl (1.1.0-1) ... Setting up libnative-platform-jni (0.14-5) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libsimple-http-java (4.1.21-1fakesync1) ... Setting up libdom4j-java (2.1.1-2) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up default-jdk-doc (2:1.11-71) ... Setting up libk5crypto3:amd64 (1.17-1) ... Setting up libpython3.7-stdlib:amd64 (3.7.2-1build1) ... Setting up fontconfig-config (2.13.0-5ubuntu3) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libwind0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libcglib-java (3.2.10-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libnative-platform-java (0.14-5) ... Setting up libnet-ssleay-perl (1.85-2ubuntu3) ... Setting up libllvm7:amd64 (1:7.0.1-4) ... Setting up libasn1-8-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libjansi-java (1.16-1) ... Setting up groff-base (1.22.4-2) ... Setting up java-wrappers (0.3) ... Setting up libdevel-callchecker-perl (0.007-2build2) ... Setting up testng (6.9.12-4) ... Setting up libhcrypto4-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libreflectasm-java (1.05-4) ... Setting up libguava-java (19.0-1) ... Setting up libnss3:amd64 (2:3.39-1ubuntu1) ... Setting up libharfbuzz0b:amd64 (2.3.0-1) ... Setting up libtiff5:amd64 (4.0.10-3) ... Setting up python3.7 (3.7.2-1build1) ... Setting up autoconf (2.69-11) ... Setting up libthai0:amd64 (0.1.28-1) ... Setting up file (1:5.35-2) ... Setting up libhx509-5-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libwagon-file-java (3.2.0-2) ... Setting up libdrm2:amd64 (2.4.95-1) ... Setting up libbcpg-java (1.60-1) ... Setting up libmockito-java (1.10.19-4) ... Setting up libcommons-parent-java (43-1) ... Setting up libxerces2-java (2.11.0-9) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libcdi-api-java (1.2-2) ... Setting up libdrm-intel1:amd64 (2.4.95-1) ... Setting up libjna-java (4.5.2-1) ... Setting up libjline2-java (2.14.6-1) ... Setting up libplexus-container-default-java (1.7.1-7) ... Setting up libcommons-compress-java (1.18-1) ... Setting up libcommons-lang3-java (3.8-2) ... Setting up libjacoco-java (0.8.1-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-listing-perl (6.04-1) ... Setting up libxstream-java (1.4.11.1-1) ... Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libhttp-message-perl (6.18-1) ... Setting up libkrb5-3:amd64 (1.17-1) ... Setting up libavahi-common3:amd64 (0.7-4ubuntu4) ... Setting up libdrm-radeon1:amd64 (2.4.95-1) ... Setting up libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up dbus (1.12.10-1ubuntu2) ... Setting up libdrm-nouveau2:amd64 (2.4.95-1) ... Setting up libcommons-codec-java (1.11-1) ... Setting up libcommons-lang-java (2.6-8) ... Setting up libparams-classify-perl (0.015-1build1) ... Setting up libnekohtml-java (1.9.22-1) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libtool (2.4.6-8) ... Setting up libpython3-stdlib:amd64 (3.7.2-1) ... Setting up libxcb-present0:amd64 (1.13.1-2) ... Setting up libfontconfig1:amd64 (2.13.0-5ubuntu3) ... Setting up libxcb-dri2-0:amd64 (1.13.1-2) ... Setting up libxcb-dri3-0:amd64 (1.13.1-2) ... Setting up libxcb-glx0:amd64 (1.13.1-2) ... Setting up libcommons-io-java (2.6-2) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libpam-systemd:amd64 (239-7ubuntu15) ... Setting up libbcel-java (6.2-1) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.2-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.95-1) ... Setting up libhttp-cookies-perl (6.04-1) ... Setting up libguice-java (4.2.1-1) ... Setting up libplexus-container-default1.5-java (1.7.1-7) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libkryo-java (2.20-6) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libgl1-mesa-dri:amd64 (18.3.2-1ubuntu1) ... Setting up libcommons-logging-java (1.2-2) ... Setting up libmaven-shared-utils-java (3.3.0-1) ... Setting up dbus-user-session (1.12.10-1ubuntu2) ... Setting up libxcb-sync1:amd64 (1.13.1-2) ... Setting up libgssapi-krb5-2:amd64 (1.17-1) ... Setting up libsisu-inject-java (0.3.2-3) ... Setting up libhttpclient-java (4.5.6-1ubuntu1) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libfindbugs-java (3.1.0~preview2-3) ... Setting up libavahi-client3:amd64 (0.7-4ubuntu4) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up fontconfig (2.13.0-5ubuntu3) ... Regenerating fonts cache... done. Setting up libcups2:amd64 (2.2.10-3) ... Setting up liblightcouch-java (0.0.6-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libxdamage1:amd64 (1:1.1.4-3) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up dconf-service (0.30.1-2) ... Setting up libsisu-plexus-java (0.3.3-3) ... Setting up libatspi2.0-0:amd64 (2.30.0-5) ... Setting up libwagon-http-java (3.2.0-2) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-7) ... Setting up libjgit-java (3.7.1-6) ... Setting up libxtst6:amd64 (2:1.2.3-1) ... Setting up gtk-update-icon-cache (3.24.3-1ubuntu1) ... Setting up libxcursor1:amd64 (1:1.1.15-2) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-2ubuntu1) ... Setting up libpango-1.0-0:amd64 (1.42.4-6) ... Setting up libatk-bridge2.0-0:amd64 (2.30.0-2) ... Setting up liblog4j2-java (2.11.1-2) ... Setting up libmoo-perl (2.003004-2) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1) ... Setting up dirmngr (2.2.12-1ubuntu2) ... Setting up dconf-gsettings-backend:amd64 (0.30.1-2) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libglx-mesa0:amd64 (18.3.2-1ubuntu1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libcairo2:amd64 (1.16.0-2) ... Setting up libxinerama1:amd64 (2:1.1.4-1) ... Setting up gsettings-desktop-schemas (3.31.0.2-2ubuntu1) ... Setting up libmaven3-core-java (3.6.0-1) ... Setting up libgtk-3-common (3.24.3-1ubuntu1) ... Setting up libcairo-gobject2:amd64 (1.16.0-2) ... Setting up gpg-wks-client (2.2.12-1ubuntu2) ... Setting up libpangoft2-1.0-0:amd64 (1.42.4-6) ... Setting up glib-networking:amd64 (2.58.0-2) ... Setting up libglx0:amd64 (1.1.0-1) ... Setting up gnupg (2.2.12-1ubuntu2) ... Setting up libsoup2.4-1:amd64 (2.64.2-2) ... Setting up libsoup-gnome2.4-1:amd64 (2.64.2-2) ... Setting up libpangocairo-1.0-0:amd64 (1.42.4-6) ... Setting up libgl1:amd64 (1.1.0-1) ... Setting up librest-0.7-0:amd64 (0.8.1-1) ... Setting up librsvg2-2:amd64 (2.44.10-1) ... Setting up librsvg2-common:amd64 (2.44.10-1) ... Setting up libgl1-mesa-glx:amd64 (18.3.2-1ubuntu1) ... Setting up adwaita-icon-theme (3.30.0-0ubuntu1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up dh-autoreconf (19) ... Setting up liblwp-protocol-https-perl (6.07-2) ... Setting up openjdk-11-jre-headless:amd64 (11.0.1+13-3ubuntu3.19.04.1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up openjdk-11-jdk-headless:amd64 (11.0.1+13-3ubuntu3.19.04.1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up humanity-icon-theme (0.6.15) ... Setting up libgtk-3-0:amd64 (3.24.3-1ubuntu1) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up ant (1.10.5-2) ... Setting up junit4 (4.12-8) ... Setting up maven-repo-helper (1.9.3) ... Setting up ivy (2.4.0-5) ... Setting up default-jre-headless (2:1.11-71) ... Setting up default-jdk-headless (2:1.11-71) ... Setting up libwww-perl (6.36-1) ... Setting up openjdk-11-jre:amd64 (11.0.1+13-3ubuntu3.19.04.1) ... Setting up debhelper (12ubuntu1) ... Setting up ca-certificates-java (20180516ubuntu1) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:Amazon_Root_CA_2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:Visa_eCommerce_Root.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Certplus_Root_CA_G2.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:OpenTrust_Root_CA_G3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:OpenTrust_Root_CA_G1.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:ACCVRAIZ1.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Secure_Global_CA.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Taiwan_GRCA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:Certigna.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:Deutsche_Telekom_Root_CA_2.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H5.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Certplus_Class_2_Primary_CA.pem Adding debian:TrustCor_ECA-1.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Certplus_Root_CA_G1.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:ISRG_Root_X1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:EC-ACC.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:AffirmTrust_Premium.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Izenpe.com.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:AffirmTrust_Networking.pem Adding debian:SecureSign_RootCA11.pem Adding debian:AddTrust_External_Root.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:DST_Root_CA_X3.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:OpenTrust_Root_CA_G2.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certinomis_-_Root_CA.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem Adding debian:SecureTrust_CA.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:SwissSign_Silver_CA_-_G2.pem done. Setting up ubuntu-mono (16.10+18.10.20181005-0ubuntu1) ... Setting up default-jre (2:1.11-71) ... Setting up ant-optional (1.10.5-2) ... Setting up antlr (2.7.7+dfsg-9.2build2) ... Setting up devscripts (2.19.2) ... Setting up bnd (3.5.0-4) ... Setting up javahelper (0.72.1) ... Setting up openjdk-11-jdk:amd64 (11.0.1+13-3ubuntu3.19.04.1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk (2:1.11-71) ... Setting up groovy (2.4.16-1ubuntu1) ... update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode Setting up libgradle-core-java (4.4.1-4) ... Setting up libgradle-plugins-java (4.4.1-4) ... Setting up gradle (4.4.1-4) ... Setting up gradle-debian-helper (2.0.2) ... Setting up sbuild-build-depends-barclay-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (239-7ubuntu15) ... Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-7) ... Processing triggers for ca-certificates (20180409) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc-8_8.2.0-14ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 linux-libc-dev_4.19.0-9.10 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 adwaita-icon-theme_3.30.0-0ubuntu1 ant_1.10.5-2 ant-optional_1.10.5-2 antlr_2.7.7+dfsg-9.2build2 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_5.0-1ubuntu1 binutils_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 binutils-x86-64-linux-gnu_2.31.1-11ubuntu1 bnd_3.5.0-4 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 ca-certificates-java_20180516ubuntu1 coreutils_8.30-1ubuntu1 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-14ubuntu1 dash_0.5.10.2-4ubuntu1 dbus_1.12.10-1ubuntu2 dbus-user-session_1.12.10-1ubuntu2 dconf-gsettings-backend_0.30.1-2 dconf-service_0.30.1-2 dctrl-tools_2.24-3 debconf_1.5.70 debhelper_12ubuntu1 debianutils_4.8.6 default-jdk_2:1.11-71 default-jdk-doc_2:1.11-71 default-jdk-headless_2:1.11-71 default-jre_2:1.11-71 default-jre-headless_2:1.11-71 devscripts_2.19.2 dh-autoreconf_19 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1ubuntu2 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig_2.13.0-5ubuntu3 fontconfig-config_2.13.0-5ubuntu3 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-14ubuntu1 gcc-8-base_8.2.0-14ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 glib-networking_2.58.0-2 glib-networking-common_2.58.0-2 glib-networking-services_2.58.0-2 gnupg_2.2.12-1ubuntu2 gnupg-l10n_2.2.12-1ubuntu2 gnupg-utils_2.2.12-1ubuntu2 gpg_2.2.12-1ubuntu2 gpg-agent_2.2.12-1ubuntu2 gpg-wks-client_2.2.12-1ubuntu2 gpg-wks-server_2.2.12-1ubuntu2 gpgconf_2.2.12-1ubuntu2 gpgsm_2.2.12-1ubuntu2 gpgv_2.2.12-1ubuntu2 gradle_4.4.1-4 gradle-debian-helper_2.0.2 grep_3.3-1 groff-base_1.22.4-2 groovy_2.4.16-1ubuntu1 gsettings-desktop-schemas_3.31.0.2-2ubuntu1 gtk-update-icon-cache_3.24.3-1ubuntu1 gzip_1.9-3 hicolor-icon-theme_0.17-2 hostname_3.21 humanity-icon-theme_0.6.15 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 ivy_2.4.0-5 java-common_0.71 java-wrappers_0.3 javahelper_0.72.1 junit4_4.12-8 libacl1_2.2.52-3build1 libantlr-java_2.7.7+dfsg-9.2build2 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libsmartcols1_2.33.1-0.1ubuntu1 libsoup-gnome2.4-1_2.64.2-2 libsoup2.4-1_2.64.2-2 libsqlite3-0_3.26.0+fossilbc891ac6b-1build1 libss2_1.44.5-1 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 libstrictures-perl_2.000005-1 libsub-exporter-progressive-perl_0.001013-1 libsub-quote-perl_2.005001-1 libsystemd0_239-7ubuntu15 libtasn1-6_4.13-3 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtimedate-perl_2.3000-2 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-8 libtry-tiny-perl_0.30-1 libtsan0_8.2.0-14ubuntu1 libubsan1_8.2.0-14ubuntu1 libuchardet0_0.0.6-3 libudev1_239-7ubuntu15 libunistring2_0.9.10-1ubuntu1 liburi-perl_1.76-1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.33.1-0.1ubuntu1 libwagon-file-java_3.2.0-2 libwagon-http-java_3.2.0-2 libwagon-provider-api-java_3.2.0-2 libwayland-client0_1.16.0-1ubuntu2 libwayland-cursor0_1.16.0-1ubuntu2 libwayland-egl1_1.16.0-1ubuntu2 libwebp6_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-2.1 libwww-perl_6.36-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx11-xcb1_2:1.6.7-1 libxau6_1:1.0.8-1 libxbean-reflect-java_4.5-8 libxcb-dri2-0_1.13.1-2 libxcb-dri3-0_1.13.1-2 libxcb-glx0_1.13.1-2 libxcb-present0_1.13.1-2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb-sync1_1.13.1-2 libxcb1_1.13.1-2 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-2 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxerces2-java_2.11.0-9 libxext6_2:1.3.3-1 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-1 libxkbcommon0_0.8.2-1 libxml-commons-external-java_1.4.01-3 libxml-commons-resolver1.1-java_1.2-9 libxml2_2.9.4+dfsg1-7ubuntu3 libxpp3-java_1.1.4c-3 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxstream-java_1.4.11.1-1 libxtst6_2:1.2.3-1 libxxf86vm1_1:1.1.4-1 libxz-java_1.8-2 libyaml-snake-java_1.23-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.0-9.10 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-1 maven-repo-helper_1.9.3 mawk_1.3.3-17ubuntu3 mime-support_3.60ubuntu1 mount_2.33.1-0.1ubuntu1 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 netbase_5.5 openjdk-11-doc_11.0.1+13-3ubuntu3.19.04.1 openjdk-11-jdk_11.0.1+13-3ubuntu3.19.04.1 openjdk-11-jdk-headless_11.0.1+13-3ubuntu3.19.04.1 openjdk-11-jre_11.0.1+13-3ubuntu3.19.04.1 openjdk-11-jre-headless_11.0.1+13-3ubuntu3.19.04.1 openssl_1.1.1a-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 patchutils_0.3.4-2 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.28_5.28.1-3 perl-openssl-defaults_3build1 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 python3_3.7.2-1 python3-minimal_3.7.2-1 python3.7_3.7.2-1build1 python3.7-minimal_3.7.2-1build1 readline-common_8.0-1 sbuild-build-depends-barclay-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-4 testng_6.9.12-4 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 ubuntu-mono_16.10+18.10.20181005-0ubuntu1 ucf_3.0038+nmu1 unzip_6.0-21ubuntu1 util-linux_2.32-0.1ubuntu2 wdiff_1.2.2-2build1 x11-common_1:7.7+19ubuntu8 xkb-data_2.23.1-1ubuntu1.18.10.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Jan 17 09:45:08 2019 UTC gpgv: using RSA key 5FB46F83D3B952046335D26D78DC68DB326D8438 gpgv: issuer "osallou@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./barclay_2.1.0-3.dsc dpkg-source: info: extracting barclay in barclay-2.1.0 dpkg-source: info: unpacking barclay_2.1.0.orig.tar.xz dpkg-source: info: unpacking barclay_2.1.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_debian_build.patch dpkg-source: info: applying fix_deprecation.patch dpkg-source: info: applying fix_dataprovider.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16295201 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16295201 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16295201 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package barclay dpkg-buildpackage: info: source version 2.1.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --buildsystem=gradle --with javahelper,jh_maven_repo_helper dh_auto_clean -O--buildsystem=gradle sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" rm -Rf /<>/.gradle /<>/buildSrc/.gradle .m2 dh_autoreconf_clean -O--buildsystem=gradle jh_clean -O--buildsystem=gradle rm -fr debian/.eclipse-build rm -f debian/orbitdeps.debhelper mh_clean -O--buildsystem=gradle debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libbarclay-java.substvars debian/files rm -fr -- debian/libbarclay-java/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f debian/bd-temp-substvars rm -f debian/bd.substvars make[1]: Leaving directory '/<>' debian/rules build dh build --buildsystem=gradle --with javahelper,jh_maven_repo_helper dh_update_autotools_config -O--buildsystem=gradle dh_autoreconf -O--buildsystem=gradle dh_auto_configure -O--buildsystem=gradle jh_linkjars -O--buildsystem=gradle debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- jar mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=barclay -Dfile.encoding=UTF-8 --parallel --max-workers=4 jar Initialized native services in: /<>/.gradle/native WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access using Lookup on org.gradle.internal.classloader.ClassLoaderUtils (file:/usr/share/gradle/lib/gradle-base-services-4.4.1.jar) to class java.lang.ClassLoader WARNING: Please consider reporting this to the maintainers of org.gradle.internal.classloader.ClassLoaderUtils WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@7d42c224 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@7d42c224 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@7d42c224 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@7d42c224 locale: en Using 4 worker leases. Creating new cache for fileHashes, path /<>/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@24fb6a80 Creating new cache for resourceHashesCache, path /<>/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@24fb6a80 Creating new cache for fileHashes, path /<>/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@352c308 Starting Build Compiling initialization script '/<>/.gradle/init.d/init.gradle' using SubsetScriptTransformer. Creating new cache for metadata-1.1/results, path /<>/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@751ae8a4 Compiling initialization script '/<>/.gradle/init.d/init.gradle' using BuildScriptTransformer. Settings evaluated using settings file '/<>/settings.gradle'. Settings file not found (/<>/settings.gradle) Root project name not defined in settings.gradle, defaulting to 'barclay' instead of the name of the root directory 'barclay-2.1.0' Projects loaded. Root project using build file '/<>/build.gradle'. Included projects: [root project 'barclay'] Keep-alive timer started Adding Debian repository to project 'barclay' Parallel execution is an incubating feature. Evaluating root project 'barclay' using build file '/<>/build.gradle'. Compiling build file '/<>/build.gradle' using SubsetScriptTransformer. Compiling build file '/<>/build.gradle' using BuildScriptTransformer. Starting process 'command 'dpkg-parsechangelog''. Working directory: /<> Command: dpkg-parsechangelog -S Version Successfully started process 'command 'dpkg-parsechangelog'' Adding Maven pom generation to project 'barclay' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : Creating new cache for annotation-processors, path /<>/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@4f2d8175 Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar'] Creating new cache for resourceHashesCache, path /<>/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@352c308 Creating new cache for taskHistory, path /<>/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@37c5b8e8 Creating new cache for outputFiles, path /<>/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@13047d3d :compileJava (Thread[Task worker for ':',5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.017 secs. Creating new cache for metadata-2.36/module-metadata, path /<>/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@61547253 Loading the Maven rules... Replacing net.sf.jopt-simple:jopt-simple:jar:5.0.3 -> net.sf.jopt-simple:jopt-simple:jar:debian Replacing org.apache.commons:commons-lang3:jar:3.4 -> org.apache.commons:commons-lang3:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Replacing org.apache.logging.log4j:log4j-api:jar:2.3 -> org.apache.logging.log4j:log4j-api:jar:debian Passing through org.apache.logging.log4j:log4j:jar:debian Replacing org.apache.logging.log4j:log4j-core:jar:2.3 -> org.apache.logging.log4j:log4j-core:jar:debian Replacing org.freemarker:freemarker:jar:2.3.23 -> org.freemarker:freemarker:jar:debian Replacing com.google.code.gson:gson:jar:2.2.2 -> com.google.code.gson:gson:jar:debian Passing through com.google.code.gson:gson-parent:jar:debian Up-to-date check for task ':compileJava' took 0.74 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileJava'. Compiling with JDK Java compiler API. /<>/src/main/java/org/broadinstitute/barclay/help/BashTabCompletionDoclet.java:3: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.RootDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:5: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:6: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.RootDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocWorkUnit.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:4: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.FieldDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:3: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.FieldDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:4: warning: [removal] PackageDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.PackageDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:5: warning: [removal] ProgramElementDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ProgramElementDoc; ^ /<>/src/main/java/org/broadinstitute/barclay/utils/Utils.java:3: warning: [deprecation] WordUtils in org.apache.commons.lang3.text has been deprecated import org.apache.commons.lang3.text.WordUtils; ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:94: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal private RootDoc rootDoc; // The javadoc root doc ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:105: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal public static boolean start(final RootDoc rootDoc) throws IOException { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:139: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal protected boolean startProcessDocs(final RootDoc rootDoc) throws IOException { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:256: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal private void processDocs(final RootDoc rootDoc) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:294: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal for (final ClassDoc classDoc : rootDoc.classes()) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:316: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal public RootDoc getRootDoc() { return rootDoc; } ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:361: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal public boolean includeInDocs(final DocumentedFeature documentedFeature, final ClassDoc classDoc, final Class clazz) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:412: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc classDoc, ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:443: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal private Class getClassForClassDoc(final ClassDoc doc) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/HelpDoclet.java:570: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal public ClassDoc getClassDocForClass(final Class clazz) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/BashTabCompletionDoclet.java:257: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal public static boolean start(RootDoc rootDoc) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocWorkUnit.java:25: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal private final ClassDoc classDoc; // javadoc documentation for clazz ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocWorkUnit.java:50: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc classDoc, ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocWorkUnit.java:112: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal public ClassDoc getClassDoc() { return classDoc; } ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocWorkUnit.java:187: warning: [deprecation] newInstance() in Class has been deprecated return commandLineProperties.programGroup().newInstance(); ^ where T is a type-variable: T extends Object declared in class Class warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:195: warning: [deprecation] newInstance() in Class has been deprecated final Object argumentContainer = workUnit.getClazz().newInstance(); ^ where T is a type-variable: T extends Object declared in class Class warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:378: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal FieldDoc fieldDoc = getFieldDocForCommandLineArgument(currentWorkUnit, argDef); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:423: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal private FieldDoc getFieldDocForCommandLineArgument( ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:429: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc declaringClassDoc = getDoclet().getRootDoc().classNamed(declaringClassTypeName); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:439: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal final FieldDoc fieldDoc = getFieldDoc(declaringClassDoc, argDef.field.getName()); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:645: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal private FieldDoc getFieldDoc(final ClassDoc classDoc, final String argumentFieldName) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:645: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal private FieldDoc getFieldDoc(final ClassDoc classDoc, final String argumentFieldName) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:646: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal for (final FieldDoc fieldDoc : classDoc.fields(false)) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:662: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc typeDoc = getDoclet().getRootDoc().classNamed(fieldDoc.type().qualifiedTypeName()); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:667: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal FieldDoc result = getFieldDoc(typeDoc, argumentFieldName); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:746: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal protected Map docForArgument(final FieldDoc fieldDoc, final CommandLineArgumentParser.ArgumentDefinition def) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:800: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc doc = this.getDoclet().getClassDocForClass(enumClass); ^ /<>/src/main/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandler.java:807: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal for (final FieldDoc fieldDoc : doc.fields(false)) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:16: warning: [removal] ProgramElementDoc in com.sun.javadoc has been deprecated and marked for removal protected static Class getClassForDoc(ProgramElementDoc doc) throws ClassNotFoundException { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:20: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal protected static Field getFieldForFieldDoc(FieldDoc fieldDoc) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:35: warning: [removal] ProgramElementDoc in com.sun.javadoc has been deprecated and marked for removal protected static String getClassName(ProgramElementDoc doc, boolean binaryName) { ^ /<>/src/main/java/org/broadinstitute/barclay/help/DocletUtils.java:36: warning: [removal] PackageDoc in com.sun.javadoc has been deprecated and marked for removal PackageDoc containingPackage = doc.containingPackage(); ^ /<>/src/main/java/org/broadinstitute/barclay/utils/Utils.java:162: warning: [deprecation] WordUtils in org.apache.commons.lang3.text has been deprecated .map(line -> WordUtils.wrap(line, width)) ^ 48 warnings :compileJava (Thread[Task worker for ':',5,main]) completed. Took 2.871 secs. :processResources (Thread[Task worker for ':',5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Up-to-date check for task ':processResources' took 0.005 secs. It is not up-to-date because: No history is available. :processResources (Thread[Task worker for ':',5,main]) completed. Took 0.032 secs. :classes (Thread[Task worker for ':',5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes (Thread[Task worker for ':',5,main]) completed. Took 0.001 secs. :debianMavenPom (Thread[Task worker for ':',5,main]) started. :debianMavenPom Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs. Up-to-date check for task ':debianMavenPom' took 0.001 secs. It is not up-to-date because: No history is available. Generating pom file /<>/build/debian/barclay.pom :debianMavenPom (Thread[Task worker for ':',5,main]) completed. Took 0.097 secs. :jar (Thread[Task worker for ':' Thread 2,5,main]) started. :jar Putting task artifact state for task ':jar' into context took 0.0 secs. Up-to-date check for task ':jar' took 0.007 secs. It is not up-to-date because: No history is available. :jar (Thread[Task worker for ':' Thread 2,5,main]) completed. Took 0.067 secs. BUILD SUCCESSFUL in 7s 4 actionable tasks: 4 executed make[1]: Leaving directory '/<>' jh_build -O--buildsystem=gradle rm -f debian/libbarclay-java.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # Tests do not work with locales with a different decimal separator # (for example ',') env LC_ALL=C \ dh_auto_build -- test mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=barclay -Dfile.encoding=UTF-8 --parallel --max-workers=4 test Initialized native services in: /<>/.gradle/native To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /<>/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-11-openjdk-amd64/bin/java -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' An attempt to start the daemon took 0.777 secs. The client will now receive all logging from the daemon (pid: 9348). The daemon log file: /<>/.gradle/daemon/4.4.1/daemon-9348.out.log Closing daemon's stdin at end of input. The daemon will no longer process any standard input. Daemon will be stopped at the end of the build stopping after processing Using 4 worker leases. Creating new cache for fileHashes, path /<>/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@90aadb8 Creating new cache for resourceHashesCache, path /<>/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@90aadb8 Creating new cache for fileHashes, path /<>/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@bd8f04e Starting Build Creating new cache for metadata-1.1/results, path /<>/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@6869d392 Settings evaluated using settings file '/<>/settings.gradle'. Settings file not found (/<>/settings.gradle) Root project name not defined in settings.gradle, defaulting to 'barclay' instead of the name of the root directory 'barclay-2.1.0' Projects loaded. Root project using build file '/<>/build.gradle'. Included projects: [root project 'barclay'] Keep-alive timer started Adding Debian repository to project 'barclay' Parallel execution is an incubating feature. Evaluating root project 'barclay' using build file '/<>/build.gradle'. Starting process 'command 'dpkg-parsechangelog''. Working directory: /<> Command: dpkg-parsechangelog -S Version Successfully started process 'command 'dpkg-parsechangelog'' Adding Maven pom generation to project 'barclay' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'test' from project : Creating new cache for annotation-processors, path /<>/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@2ac94bd8 Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':compileTestJava', task ':processTestResources', task ':testClasses', task ':test'] Creating new cache for resourceHashesCache, path /<>/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@bd8f04e Creating new cache for taskHistory, path /<>/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@97cf617 Creating new cache for outputFiles, path /<>/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@64c3c03b :compileJava (Thread[Task worker for ':',5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.04 secs. Creating new cache for metadata-2.36/module-metadata, path /<>/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@7bbd37ca Loading the Maven rules... Replacing net.sf.jopt-simple:jopt-simple:jar:5.0.3 -> net.sf.jopt-simple:jopt-simple:jar:debian Replacing org.apache.commons:commons-lang3:jar:3.4 -> org.apache.commons:commons-lang3:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Replacing org.apache.logging.log4j:log4j-api:jar:2.3 -> org.apache.logging.log4j:log4j-api:jar:debian Passing through org.apache.logging.log4j:log4j:jar:debian Replacing org.apache.logging.log4j:log4j-core:jar:2.3 -> org.apache.logging.log4j:log4j-core:jar:debian Replacing org.freemarker:freemarker:jar:2.3.23 -> org.freemarker:freemarker:jar:debian Replacing com.google.code.gson:gson:jar:2.2.2 -> com.google.code.gson:gson:jar:debian Passing through com.google.code.gson:gson-parent:jar:debian Skipping task ':compileJava' as it is up-to-date (took 0.436 secs). :compileJava UP-TO-DATE :compileJava (Thread[Task worker for ':',5,main]) completed. Took 0.516 secs. :processResources (Thread[Task worker for ':' Thread 3,5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Skipping task ':processResources' as it is up-to-date (took 0.014 secs). :processResources UP-TO-DATE :processResources (Thread[Task worker for ':' Thread 3,5,main]) completed. Took 0.023 secs. :classes (Thread[Daemon worker,5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes UP-TO-DATE :classes (Thread[Daemon worker,5,main]) completed. Took 0.0 secs. :compileTestJava (Thread[Daemon worker,5,main]) started. :compileTestJava Putting task artifact state for task ':compileTestJava' into context took 0.0 secs. Passing through org.testng:testng:jar:debian Replacing org.mockito:mockito-core:jar:2.10.0 -> org.mockito:mockito-core:jar:debian Passing through org.beanshell:bsh:jar:debian Passing through com.beust:jcommander:jar:debian Passing through org.hamcrest:hamcrest-core:jar:debian Passing through org.objenesis:objenesis:jar:debian Passing through org.objenesis:objenesis-parent:jar:debian Passing through cglib:cglib:jar:debian Passing through cglib:cglib-parent:jar:debian Passing through org.ow2.asm:asm:jar:debian Up-to-date check for task ':compileTestJava' took 0.369 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileTestJava'. Compiling with JDK Java compiler API. /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:4: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.Tag; ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocWorkUnitTest.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandlerUnitTest.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/help/DefaultDocWorkUnitHandlerUnitTest.java:4: warning: [removal] FieldDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.FieldDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/help/testdoclets/TestDoclet.java:3: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.ClassDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/help/testdoclets/TestDoclet.java:4: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal import com.sun.javadoc.RootDoc; ^ /<>/src/test/java/org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java:117: warning: [deprecation] newInstance() in Class has been deprecated testPluginBase = (TestPluginBase) pluggableClass.newInstance(); ^ where T is a type-variable: T extends Object declared in class Class /<>/src/test/java/org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java:393: warning: [deprecation] newInstance() in Class has been deprecated final TestPluginArgCollisionBase plugin = (TestPluginArgCollisionBase) pluggableClass.newInstance(); ^ where T is a type-variable: T extends Object declared in class Class /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:21: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal public static ClassDoc mockClassDoc(final String javadocText, ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:24: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc mockedClassDoc = Mockito.mock(ClassDoc.class); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:24: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc mockedClassDoc = Mockito.mock(ClassDoc.class); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:26: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal final Tag[] javadoc = Arrays.stream(javadocText.split("\n")) ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:28: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal .toArray(Tag[]::new); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:30: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal final Tag[] inline = inlineTags.entrySet().stream() ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:32: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal .toArray(Tag[]::new); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:37: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal private static Tag mockTag(final String name, final String text) { ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:38: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal final Tag tag = Mockito.mock(Tag.class); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocGenMocks.java:38: warning: [removal] Tag in com.sun.javadoc has been deprecated and marked for removal final Tag tag = Mockito.mock(Tag.class); ^ /<>/src/test/java/org/broadinstitute/barclay/help/DocumentationGenerationIntegrationTest.java:241: warning: [removal] Main in com.sun.tools.javadoc has been deprecated and marked for removal com.sun.tools.javadoc.Main.execute( ^ /<>/src/test/java/org/broadinstitute/barclay/help/testdoclets/TestDoclet.java:18: warning: [removal] RootDoc in com.sun.javadoc has been deprecated and marked for removal public static boolean start(RootDoc rootDoc) { ^ /<>/src/test/java/org/broadinstitute/barclay/help/testdoclets/TestDoclet.java:29: warning: [removal] ClassDoc in com.sun.javadoc has been deprecated and marked for removal final ClassDoc classDoc, ^ 22 warnings :compileTestJava (Thread[Daemon worker,5,main]) completed. Took 2.066 secs. :processTestResources (Thread[Daemon worker,5,main]) started. :processTestResources Putting task artifact state for task ':processTestResources' into context took 0.0 secs. Up-to-date check for task ':processTestResources' took 0.012 secs. It is not up-to-date because: No history is available. :processTestResources (Thread[Daemon worker,5,main]) completed. Took 0.044 secs. :testClasses (Thread[Daemon worker,5,main]) started. :testClasses Skipping task ':testClasses' as it has no actions. :testClasses (Thread[Daemon worker,5,main]) completed. Took 0.0 secs. :test (Thread[Daemon worker,5,main]) started. :test Putting task artifact state for task ':test' into context took 0.0 secs. Up-to-date check for task ':test' took 0.364 secs. It is not up-to-date because: Task.upToDateWhen is false. A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@242e8418 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@242e8418 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@242e8418 locale: en A locale sensitive service provider returned null for a localized objects, which should not happen. provider: sun.util.cldr.CLDRCalendarDataProviderImpl@242e8418 locale: en Starting process 'Gradle Test Executor 1'. Working directory: /<> Command: /usr/lib/jvm/java-11-openjdk-amd64/bin/java -Dorg.gradle.native=false @/tmp/gradle-worker-classpath1745989826502920764txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' Successfully started process 'Gradle Test Executor 1' WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access using Lookup on worker.org.gradle.internal.classloader.ClassLoaderUtils (file:/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar) to class java.lang.ClassLoader WARNING: Please consider reporting this to the maintainers of worker.org.gradle.internal.classloader.ClassLoaderUtils WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release Gradle Test Executor 1 started executing tests. Running Test: Test method testCollectionFromExpansionFile[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@309cdae1, [], /tmp/enabledExpansion9350353656945282745.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@5fdf1147, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Test: Test method testCollectionFromExpansionFile[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@309cdae1, [], /tmp/enabledExpansion9350353656945282745.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@5fdf1147, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) produced standard out/err: ERROR StatusLogger No Log4j 2 configuration file found. Using default configuration (logging only errors to the console), or user programmatically provided configurations. Set system property 'log4j2.debug' to show Log4j 2 internal initialization logging. See https://logging.apache.org/log4j/2.x/manual/configuration.html for instructions on how to configure Log4j 2 Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests.testCollectionFromExpansionFile[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@309cdae1, [], /tmp/enabledExpansion9350353656945282745.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@5fdf1147, false) STANDARD_ERROR ERROR StatusLogger No Log4j 2 configuration file found. Using default configuration (logging only errors to the console), or user programmatically provided configurations. Set system property 'log4j2.debug' to show Log4j 2 internal initialization logging. See https://logging.apache.org/log4j/2.x/manual/configuration.html for instructions on how to configure Log4j 2 Running Test: Test method testCollectionFromExpansionFile[1](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@6e84a512, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion17632672320455869963.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@76636103, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[2](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@258d2641, [], /tmp/enabledExpansion2426546134174337499.list, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@10e74c59, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[3](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@2bcbf76f, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion3586360504161569154.list, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@344be7a4, false)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[4](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@754954c4, [], /tmp/enabledExpansion810263245147728934.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@5fa51b19, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[5](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@bdfb4ef, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion17628118617940824635.args, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@6a854dcd, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[6](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@4879aee8, [], /tmp/enabledExpansion12532804569997744359.list, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@6a1258dc, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromExpansionFile[7](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$SuppressedListFileArguments@2cf1b7bc, [APPEND_TO_COLLECTIONS], /tmp/enabledExpansion8834953044064107024.list, [Ljava.lang.String;@531e2f36, [Ljava.lang.String;@2c20a49f, true)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromListFileMixed[0](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@2378b2e5, [], [Ljava.lang.String;@3788d6b0, [Ljava.lang.String;@7efec693, [Ljava.lang.String;@3ad3d3c2, [Ljava.lang.String;@5c5ab1e7)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionFromListFileMixed[1](org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests$EnabledListFileArguments@13600c10, [APPEND_TO_COLLECTIONS], [Ljava.lang.String;@3788d6b0, [Ljava.lang.String;@7efec693, [Ljava.lang.String;@14b4a5f1, [Ljava.lang.String;@7bb4f213)(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testCollectionThatCannotBeAutoInitialized(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testGetCommandLineWithExpansionFile(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[0]([Ljava.lang.String;@205bad6, [APPEND_TO_COLLECTIONS], [foo, bar, baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[1]([Ljava.lang.String;@205bad6, [], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[2]([Ljava.lang.String;@1c9f52ee, [APPEND_TO_COLLECTIONS], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[3]([Ljava.lang.String;@1c9f52ee, [], [baz, frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[4]([Ljava.lang.String;@24180baa, [APPEND_TO_COLLECTIONS], [frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[5]([Ljava.lang.String;@24180baa, [], [frob])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[6]([Ljava.lang.String;@36be3835, [APPEND_TO_COLLECTIONS], [foo, bar])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testInitializedCollections[7]([Ljava.lang.String;@310f5474, [[]], [foo, bar])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testRejectNonCollectionFileExpansionSuppression(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testUninitializedCollections[0]([Ljava.lang.String;@34b8f162, [], [L1, L2], [S1], [HS1], [P1, P2])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method testUninitializedCollections[1]([Ljava.lang.String;@34b8f162, [APPEND_TO_COLLECTIONS], [L1, L2], [S1], [HS1], [P1, P2])(org.broadinstitute.barclay.argparser.CollectionArgumentUnitTests) Running Test: Test method passingMutexCheck[0](simple mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@4b8ddc3a, [Ljava.lang.String;@3e670b33)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method passingMutexCheck[1](collection mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@747043b3, [Ljava.lang.String;@251cdae6)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method passingMutexCheck[2](collection multiple mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@1fed0b88, [Ljava.lang.String;@4584727e)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method passingMutexCheck[3](scalar mixed, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@1268e3cf, [Ljava.lang.String;@51f64fdd)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testAbbreviationsAreRejected(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testAdvancedArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testArgumentCollection(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testArgumentNameCollision(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testArgumentUseClash(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testArgumentsFile(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testArgumentsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBadFieldCausesException(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBadValue(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBetaExperimentalMutex(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBetaFeatureUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testCombinationOfFlags(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testDefault(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testExperimentalFeatureUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFailingMutex[0](no args, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@3ade8791, [Ljava.lang.String;@7bfe153e)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFailingMutex[1](1 of group required, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@3773bdf4, [Ljava.lang.String;@3a5450f9)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFailingMutex[2](mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@df3c77f, [Ljava.lang.String;@5b6ff722)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFailingMutex[3](mega mutex, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MutexArguments@7376e59f, [Ljava.lang.String;@336ce771)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFailingMutex[4](collection and scalar mutex mix, org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest$MixedCardinalityMutexArguments@21aa15f1, [Ljava.lang.String;@3b57f928)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFlagNoArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFlagWithPositionalFollowing(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testFlagsWithArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testGatherArgumentValuesOfType[0]([--childSuperTypeTarget, childSuperTypeTargetValue, --childSubTypeTarget, childSubTypeTargetValue, --parentSuperTypeTarget, parentSuperTypeTargetValue, --parentSubTypeTarget, parentSubTypeTargetValue, --childCollectionSuperTypeTarget, childCollectionSuperTypeTargetValue, --childCollectionSubTypeTarget, childCollectionSubTypeTargetValue, --parentCollectionSuperTypeTarget, parentCollectionSuperTypeTargetValue, --parentCollectionSubTypeTarget, parentCollectionSubTypeTargetValue, --childListSuperTypeTarget, childListSuperTypeTargetValue1, --childListSuperTypeTarget, childListSuperTypeTargetValue2, --childListSuperTypeTarget, childListSuperTypeTargetValue3, --childListSubTypeTarget, childListSubTypeTargetValue1, --childListSubTypeTarget, childListSubTypeTargetValue2, --childListSubTypeTarget, childListSubTypeTargetValue3, --parentListSuperTypeTarget, parentListSuperTypeTargetValue1, --parentListSuperTypeTarget, parentListSuperTypeTargetValue2, --parentListSuperTypeTarget, parentListSuperTypeTargetValue3, --parentListSubTypeTarget, parentListSubTypeTargetValue1, --parentListSubTypeTarget, parentListSubTypeTargetValue2, --parentListSubTypeTarget, parentListSubTypeTargetValue3, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue1, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue2, --childCollectionListSuperTypeTarget, childCollectionListSuperTypeTargetValue3, --childNonTargetArgument, 1, --parentNonTargetArgument, 1, --childCollectionNonTargetArgument, 1, --parentCollectionNonTargetArgument, 1, --childNonTargetListArgument, 1], [(childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue1), (childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue2), (childCollectionListSuperTypeTarget,childCollectionListSuperTypeTargetValue3), (childCollectionSubTypeTarget,childCollectionSubTypeTargetValue), (childCollectionSuperTypeTarget,childCollectionSuperTypeTargetValue), (childListSubTypeTarget,childListSubTypeTargetValue1), (childListSubTypeTarget,childListSubTypeTargetValue2), (childListSubTypeTarget,childListSubTypeTargetValue3), (childListSuperTypeTarget,childListSuperTypeTargetValue1), (childListSuperTypeTarget,childListSuperTypeTargetValue2), (childListSuperTypeTarget,childListSuperTypeTargetValue3), (childSubTypeTarget,childSubTypeTargetValue), (childSuperTypeTarget,childSuperTypeTargetValue), (parentCollectionSubTypeTarget,parentCollectionSubTypeTargetValue), (parentCollectionSuperTypeTarget,parentCollectionSuperTypeTargetValue), (parentListSubTypeTarget,parentListSubTypeTargetValue1), (parentListSubTypeTarget,parentListSubTypeTargetValue2), (parentListSubTypeTarget,parentListSubTypeTargetValue3), (parentListSuperTypeTarget,parentListSuperTypeTargetValue1), (parentListSuperTypeTarget,parentListSuperTypeTargetValue2), (parentListSuperTypeTarget,parentListSuperTypeTargetValue3), (parentSubTypeTarget,parentSubTypeTargetValue), (parentSuperTypeTarget,parentSuperTypeTargetValue), (uninitializedChildCollectionTarget,null), (uninitializedChildListTarget,null), (uninitializedChildTarget,null), (uninitializedParentCollectionTarget,null), (uninitializedParentTarget,null)])(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testGatherArgumentValuesOfTypeWithParameterizedType(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testGetCommandLine(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testGetCommandLineWithSensitiveArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: USAGE: BooleanFlags [arguments] Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest.testHelp STANDARD_ERROR USAGE: BooleanFlags [arguments] Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Usage: program [arguments...] Usage: program [arguments...] Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Version:null Version:null Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Optional Arguments: Optional Arguments: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --antiflag1:Boolean Undocumented option Default value: false. Possible values: {true, false} Cannot be used --antiflag1:Boolean Undocumented option Default value: false. Possible values: {true, false} Cannot be used Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: in conjuction with argument(s) flag1 in conjuction with argument(s) flag1 Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --arguments_file:File read one or more arguments files and add them to the command line This argument may be --arguments_file:File read one or more arguments files and add them to the command line This argument may be Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: specified 0 or more times. Default value: null. specified 0 or more times. Default value: null. Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag1:Boolean Undocumented option Default value: false. Possible values: {true, false} Cannot be used --flag1:Boolean Undocumented option Default value: false. Possible values: {true, false} Cannot be used Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: in conjuction with argument(s) antiflag1 in conjuction with argument(s) antiflag1 Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag2:Boolean Undocumented option Default value: true. Possible values: {true, false} --flag2:Boolean Undocumented option Default value: true. Possible values: {true, false} Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --flag3:Boolean Undocumented option Default value: false. Possible values: {true, false} --flag3:Boolean Undocumented option Default value: false. Possible values: {true, false} Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --help,-h:Boolean display the help message Default value: false. Possible values: {true, false} --help,-h:Boolean display the help message Default value: false. Possible values: {true, false} Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --version:Boolean display the version number for this tool Default value: false. Possible values: {true, --version:Boolean display the version number for this tool Default value: false. Possible values: {true, Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: false} false} Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Advanced Arguments: Advanced Arguments: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: --showHidden,-showHidden:Boolean --showHidden,-showHidden:Boolean Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: display hidden arguments Default value: false. Possible values: {true, false} display hidden arguments Default value: false. Possible values: {true, false} Test: Test method testHelp(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testHiddenArguments(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testHiddenRequiredArgumentThrowException(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testLongPreamble(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testMissingRequiredCollectionArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testNotEnoughOfListArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOptionalOnlyUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[0]([Ljava.lang.String;@7bacee79)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[1]([Ljava.lang.String;@25a88f31)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[2]([Ljava.lang.String;@2b90b3b7)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[3]([Ljava.lang.String;@5963476a)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[4]([Ljava.lang.String;@b1a11e6)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[5]([Ljava.lang.String;@36469ecf)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[6]([Ljava.lang.String;@329bcdda)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testOutOfRangesArguments[7]([Ljava.lang.String;@2e80ba84)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testPositive(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testPrivateArgument(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testRequiredAdvancedNotAllowed(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testRequiredOnlyUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testRequiredOptionalWithDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testRequiredOptionalWithoutDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testVersionSpecialFlag(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Test: Test method testVersionSpecialFlag(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) produced standard out/err: Version:null Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest.testVersionSpecialFlag STANDARD_ERROR Version:null Running Test: Test method testWithBoundariesArgumentsForNoNumeric(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithDoubleBoundariesArgumentsForInteger(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[0]([Ljava.lang.String;@7cbd83d6, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[1]([Ljava.lang.String;@7d3c875a, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[2]([Ljava.lang.String;@650d71ae, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[3]([Ljava.lang.String;@52887fb0, null, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[4]([Ljava.lang.String;@781f09d, 1, null)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[5]([Ljava.lang.String;@552e0e3f, null, 2.0)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithinBoundariesArguments[6]([Ljava.lang.String;@58e8c0ce, 1, 2.0)(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithoutPositionalWithDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testWithoutPositionalWithoutDefaultUsage(org.broadinstitute.barclay.argparser.CommandLineArgumentParserTest) Running Test: Test method testBasicPlugin[0]([Ljava.lang.String;@11cd34c0, 0)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testBasicPlugin[1]([Ljava.lang.String;@75bd44c8, 1)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testDanglingFilterArguments[0](TestPluginWithRequiredArg, requiredStringArgForPlugin, fakeArgValue)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testDanglingFilterArguments[1](TestPluginWithOptionalArg, optionalStringArgForPlugin, fakeArgValue)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testEnableMultiplePlugins(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testEnableNonExistentPlugin(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testNoPluginsSpecified(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testPluginArgumentNameCollision(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testPluginUsage(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testRequiredDependentArguments[0](TestPluginWithRequiredArg, requiredStringArgForPlugin, fakeArgValue)(org.broadinstitute.barclay.argparser.CommandLinePluginUnitTest) Running Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false) STANDARD_OUT [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 33ms] [parsing completed 33ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 19ms] [parsing completed 19ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 8ms] [parsing completed 8ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 29ms] [parsing completed 29ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 6ms] [parsing completed 6ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 12ms] [parsing completed 12ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[0](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@3f42a55b, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 1279 ms] [done in 1279 ms] Running Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false) STANDARD_OUT [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 21ms] [parsing completed 21ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 38ms] [parsing completed 38ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[1](class org.broadinstitute.barclay.help.HelpDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1080d838, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 334 ms] [done in 334 ms] Running Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false) STANDARD_OUT [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 8ms] [parsing completed 8ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 14ms] [parsing completed 14ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[2](class org.broadinstitute.barclay.help.testdoclets.TestDoclet, src/test/resources/org/broadinstitute/barclay/help/templates/TestDoclet, src/test/resources/org/broadinstitute/barclay/help/expected/TestDoclet, index, html, html, html, html, [Ljava.lang.String;@c27dec1, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 264 ms] [done in 264 ms] Running Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true) STANDARD_OUT [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[3](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, src/main/resources/org/broadinstitute/barclay/helpTemplates, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@6cf9f560, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 266 ms] [done in 266 ms] Running Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false) STANDARD_OUT [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[4](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, html, html, [Ljava.lang.String;@1bbe281f, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 173 ms] [done in 173 ms] Running Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false) STANDARD_OUT [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 11ms] [parsing completed 11ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[5](class org.broadinstitute.barclay.help.HelpDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/HelpDoclet, index, html, html, xhtml, html, [Ljava.lang.String;@1423b8f6, false)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 159 ms] [done in 159 ms] Running Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true) STANDARD_OUT [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 5ms] [parsing completed 5ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 6ms] [parsing completed 6ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[6](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunch-completion, sh, sh, sh, sh, [Ljava.lang.String;@f7c3dd5, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 212 ms] [done in 212 ms] Running Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Gradle suite > Gradle test > org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest.testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true) STANDARD_OUT [loading /modules/jdk.internal.vm.compiler.management/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported/module-info.class] [loading /modules/jdk.unsupported/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.transaction.xa/module-info.class] [loading /modules/java.transaction.xa/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn.shell/module-info.class] [loading /modules/jdk.scripting.nashorn.shell/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.zipfs/module-info.class] [loading /modules/jdk.zipfs/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management/module-info.class] [loading /modules/jdk.management/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.desktop/module-info.class] [loading /modules/java.desktop/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.smartcardio/module-info.class] [loading /modules/java.smartcardio/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/module-info.class] [loading /modules/java.base/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.jvmstat/module-info.class] [loading /modules/jdk.internal.jvmstat/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.se/module-info.class] [loading /modules/java.se/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.rmic/module-info.class] [loading /modules/jdk.rmic/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.ed/module-info.class] [loading /modules/jdk.internal.ed/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.jgss/module-info.class] [loading /modules/jdk.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql.rowset/module-info.class] [loading /modules/java.sql.rowset/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.accessibility/module-info.class] [loading /modules/jdk.accessibility/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jstatd/module-info.class] [loading /modules/jdk.jstatd/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdi/module-info.class] [loading /modules/jdk.jdi/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.rmi/module-info.class] [loading /modules/jdk.naming.rmi/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.sctp/module-info.class] [loading /modules/jdk.sctp/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.rmi/module-info.class] [loading /modules/java.rmi/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jsobject/module-info.class] [loading /modules/jdk.jsobject/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management.rmi/module-info.class] [loading /modules/java.management.rmi/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdeps/module-info.class] [loading /modules/jdk.jdeps/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml.crypto/module-info.class] [loading /modules/java.xml.crypto/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.prefs/module-info.class] [loading /modules/java.prefs/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.xml/module-info.class] [loading /modules/java.xml/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.opt/module-info.class] [loading /modules/jdk.internal.opt/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.ec/module-info.class] [loading /modules/jdk.crypto.ec/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jcmd/module-info.class] [loading /modules/jdk.jcmd/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.security.auth/module-info.class] [loading /modules/jdk.security.auth/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.editpad/module-info.class] [loading /modules/jdk.editpad/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.naming.dns/module-info.class] [loading /modules/jdk.naming.dns/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.crypto.cryptoki/module-info.class] [loading /modules/jdk.crypto.cryptoki/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jdwp.agent/module-info.class] [loading /modules/jdk.jdwp.agent/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.sasl/module-info.class] [loading /modules/java.security.sasl/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jlink/module-info.class] [loading /modules/jdk.jlink/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.sql/module-info.class] [loading /modules/java.sql/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.pack/module-info.class] [loading /modules/jdk.pack/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.le/module-info.class] [loading /modules/jdk.internal.le/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.ci/module-info.class] [loading /modules/jdk.internal.vm.ci/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.compiler/module-info.class] [loading /modules/java.compiler/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.datatransfer/module-info.class] [loading /modules/java.datatransfer/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.javadoc/module-info.class] [loading /modules/jdk.javadoc/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.unsupported.desktop/module-info.class] [loading /modules/jdk.unsupported.desktop/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.management/module-info.class] [loading /modules/java.management/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.dynalink/module-info.class] [loading /modules/jdk.dynalink/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jartool/module-info.class] [loading /modules/jdk.jartool/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.agent/module-info.class] [loading /modules/jdk.management.agent/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.xml.dom/module-info.class] [loading /modules/jdk.xml.dom/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.security.jgss/module-info.class] [loading /modules/java.security.jgss/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.httpserver/module-info.class] [loading /modules/jdk.httpserver/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.instrument/module-info.class] [loading /modules/java.instrument/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jconsole/module-info.class] [loading /modules/jdk.jconsole/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.aot/module-info.class] [loading /modules/jdk.aot/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.localedata/module-info.class] [loading /modules/jdk.localedata/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.scripting.nashorn/module-info.class] [loading /modules/jdk.scripting.nashorn/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.logging/module-info.class] [loading /modules/java.logging/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jfr/module-info.class] [loading /modules/jdk.jfr/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.attach/module-info.class] [loading /modules/jdk.attach/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.charsets/module-info.class] [loading /modules/jdk.charsets/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.internal.vm.compiler/module-info.class] [loading /modules/jdk.internal.vm.compiler/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.net/module-info.class] [loading /modules/jdk.net/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.compiler/module-info.class] [loading /modules/jdk.compiler/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.scripting/module-info.class] [loading /modules/java.scripting/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.hotspot.agent/module-info.class] [loading /modules/jdk.hotspot.agent/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.jshell/module-info.class] [loading /modules/jdk.jshell/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.naming/module-info.class] [loading /modules/java.naming/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.net.http/module-info.class] [loading /modules/java.net.http/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/jdk.management.jfr/module-info.class] [loading /modules/jdk.management.jfr/module-info.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.help.testinputs... Loading source files for package org.broadinstitute.barclay.help.testinputs... Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentContainer.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 4ms] [parsing completed 4ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestArgumentCollection.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestBaseArgumentType.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/help/testinputs/TestExtraDocs.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Loading source files for package org.broadinstitute.barclay.argparser... Loading source files for package org.broadinstitute.barclay.argparser... Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TestProgramGroup.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLinePluginUnitTest.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CollectionArgumentUnitTests.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 1ms] [parsing completed 1ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 3ms] [parsing completed 3ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/TaggedArgumentTest.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 2ms] [parsing completed 2ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] [parsing started DirectoryFileObject[src/test/java:org/broadinstitute/barclay/argparser/StrictBooleanConverterTest.java]] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [parsing completed 0ms] [parsing completed 0ms] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: Constructing Javadoc information... Constructing Javadoc information... Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for source files: src/test/java] [search path for source files: src/test/java] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] [search path for class files: /usr/lib/jvm/java-11-openjdk-amd64/lib/modules,/<>/.gradle/caches/4.4.1/workerMain/gradle-worker.jar,/<>/build/classes/java/test,/<>/build/resources/test,/<>/build/classes/java/main,/<>/build/resources/main,/usr/share/maven-repo/net/sf/jopt-simple/jopt-simple/debian/jopt-simple-debian.jar,/usr/share/maven-repo/org/apache/commons/commons-lang3/debian/commons-lang3-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.jar,/usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.jar,/usr/share/maven-repo/org/freemarker/freemarker/debian/freemarker-debian.jar,/usr/share/maven-repo/com/google/code/gson/gson/debian/gson-debian.jar,/usr/share/maven-repo/org/testng/testng/debian/testng-debian.jar,/usr/share/maven-repo/org/mockito/mockito-core/debian/mockito-core-debian.jar,/usr/share/java/objenesis.jar,/usr/share/java/cglib.jar,/usr/share/java/hamcrest-core.jar,/usr/share/java/asm.jar,/usr/share/java/junit4.jar,/usr/share/maven-repo/org/beanshell/bsh/debian/bsh-debian.jar,/usr/share/maven-repo/com/beust/jcommander/debian/jcommander-debian.jar] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginProvider.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/help/DocumentedFeature.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/File.class] [loading /modules/java.base/java/io/File.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Object.class] [loading /modules/java.base/java/lang/Object.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramProperties.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/BetaFeature.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/String.class] [loading /modules/java.base/java/lang/String.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Argument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/List.class] [loading /modules/java.base/java/util/List.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Double.class] [loading /modules/java.base/java/lang/Double.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/ArrayList.class] [loading /modules/java.base/java/util/ArrayList.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Enum.class] [loading /modules/java.base/java/lang/Enum.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Comparable.class] [loading /modules/java.base/java/lang/Comparable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Serializable.class] [loading /modules/java.base/java/io/Serializable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParser$ClpEnum.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLinePluginDescriptor.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ExperimentalFeature.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineProgramGroup.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] [loading /usr/share/java/testng.jar(/org/testng/Assert.class)] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/DataProvider.class)] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] [loading /usr/share/java/testng.jar(/org/testng/annotations/Test.class)] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Integer.class] [loading /modules/java.base/java/lang/Integer.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Class.class] [loading /modules/java.base/java/lang/Class.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Map.class] [loading /modules/java.base/java/util/Map.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Set.class] [loading /modules/java.base/java/util/Set.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/IllegalAccessException.class] [loading /modules/java.base/java/lang/IllegalAccessException.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/InstantiationException.class] [loading /modules/java.base/java/lang/InstantiationException.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/IOException.class] [loading /modules/java.base/java/io/IOException.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintWriter.class] [loading /modules/java.base/java/io/PrintWriter.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineParserOptions.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/HashSet.class] [loading /modules/java.base/java/util/HashSet.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/Collection.class] [loading /modules/java.base/java/util/Collection.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] [loading /usr/share/java/commons-lang3.jar(/org/apache/commons/lang3/tuple/Pair.class)] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/ByteArrayOutputStream.class] [loading /modules/java.base/java/io/ByteArrayOutputStream.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/PrintStream.class] [loading /modules/java.base/java/io/PrintStream.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/reflect/Field.class] [loading /modules/java.base/java/lang/reflect/Field.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/util/function/Consumer.class] [loading /modules/java.base/java/util/function/Consumer.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Exception.class] [loading /modules/java.base/java/lang/Exception.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Runnable.class] [loading /modules/java.base/java/lang/Runnable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/SpecialArgumentsCollection.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Boolean.class] [loading /modules/java.base/java/lang/Boolean.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/OutputStream.class] [loading /modules/java.base/java/io/OutputStream.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Closeable.class] [loading /modules/java.base/java/io/Closeable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AutoCloseable.class] [loading /modules/java.base/java/lang/AutoCloseable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/io/Flushable.class] [loading /modules/java.base/java/io/Flushable.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] [loading /usr/share/java/joptsimple.jar(/joptsimple/ValueConversionException.class)] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Deprecated.class] [loading /modules/java.base/java/lang/Deprecated.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Retention.class] [loading /modules/java.base/java/lang/annotation/Retention.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] [loading /modules/java.base/java/lang/annotation/RetentionPolicy.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Target.class] [loading /modules/java.base/java/lang/annotation/Target.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/ElementType.class] [loading /modules/java.base/java/lang/annotation/ElementType.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/annotation/Annotation.class] [loading /modules/java.base/java/lang/annotation/Annotation.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ArgumentCollection.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/PositionalArguments.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Hidden.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/Advanced.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Override.class] [loading /modules/java.base/java/lang/Override.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$MissingArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$CommandLineParserInternalException.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$BadArgumentValue.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/CommandLineException$OutOfRangeArgumentValue.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/SuppressWarnings.class] [loading /modules/java.base/java/lang/SuppressWarnings.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Byte.class] [loading /modules/java.base/java/lang/Byte.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Character.class] [loading /modules/java.base/java/lang/Character.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Short.class] [loading /modules/java.base/java/lang/Short.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Long.class] [loading /modules/java.base/java/lang/Long.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Float.class] [loading /modules/java.base/java/lang/Float.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/Void.class] [loading /modules/java.base/java/lang/Void.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /modules/java.base/java/lang/AssertionError.class] [loading /modules/java.base/java/lang/AssertionError.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/help/testinputs/TestArgumentContainer$1.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1OptionFileContainerForUsage.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/TaggedArgumentParser$ParsedArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParser$1.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/ClassFinder.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] [loading /<>/build/classes/java/main/org/broadinstitute/barclay/argparser/StrictBooleanConverter.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithAdvancedArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredHiddenArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithDoubleBoundariesArgumentsForInteger.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithHiddenArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1WithBoundariesArgumentsForString.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1ToolWithRequiredAdvancedArgument.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/LegacyCommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/CommandLineArgumentParserTest$1.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] [loading /<>/build/classes/java/test/org/broadinstitute/barclay/argparser/TaggedArgumentTest$1.class] Test: Test method testDocGenRoundTrip[7](class org.broadinstitute.barclay.help.BashTabCompletionDoclet, null, src/test/resources/org/broadinstitute/barclay/help/expected/BashTabCompletionDoclet, bashTabCompletionDocletTestLaunchWithDefaults-completion, sh, sh, sh, sh, [Ljava.lang.String;@68072a50, true)(org.broadinstitute.barclay.help.DocumentationGenerationIntegrationTest) produced standard out/err: [done in 135 ms] [done in 135 ms] Running Test: Test method testAddToDefaultValuesListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testArgumentCollectionFlat(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testArgumentCollectionNested(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testArgumentCollectionNoReferenceProvidedForOptional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'REFERENCE_SEQUENCE' is required. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testArgumentCollectionNoReferenceProvidedForRequired STANDARD_ERROR ERROR: Option 'REFERENCE_SEQUENCE' is required. Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: ToolWithRequiredReference [options] USAGE: ToolWithRequiredReference [options] Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...] Usage: program [options...] Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: REFERENCE_SEQUENCE=File A reference is required Required. REFERENCE_SEQUENCE=File A reference is required Required. Test: Test method testArgumentCollectionNoReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testArgumentCollectionWithReferenceProvidedForOptional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testArgumentCollectionWithReferenceProvidedForRequired(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: 'HiMom' is not a valid value for FrobnicationFlavor. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testBadEnumValue STANDARD_ERROR ERROR: 'HiMom' is not a valid value for FrobnicationFlavor. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testBadEnumValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Problem constructing Integer from the string 'ABC'. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testBadValue STANDARD_ERROR ERROR: Problem constructing Integer from the string 'ABC'. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testBadValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testBetaExperimentalMutex(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testBetaFeatureUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testClearDefaultValuesFromListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testClearDefaultValuesFromListOptionAndAddNew(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testCollectionThatCannotBeAutoInitialized(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testExperimentalFeatureUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testForIdenticalShortName(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[0](hello, hello)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[1](, )(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[2](hibye, hi bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[3](hibye, hibye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[4](hi
  • bye, hi - bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[5](hibye, hibye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[6](
    , 

)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[7]( string,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[8]( string,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[9](< a href="http://go.here.org"> string,  string (http://go.here.org))(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest)
Running Test: Test method testHTMLConverter[10](hi
    • bye, hi bye)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHTMLConverter[11](Using read outputs from high throughput sequencing (HTS) technologies, this tool provides metrics regarding the quality of read alignments to a reference sequence, as well as the proportion of the reads that passed machine signal-to-noise threshold quality filters (Illumina).

    Usage example:

        java -jar picard.jar CollectAlignmentSummaryMetrics \
              R=reference_sequence.fasta \
              I=input.bam \
              O=output.txt
    Please see     the AlignmentSummaryMetrics documentation for detailed explanations of each metric.

    Additional information about Illumina's quality filters can be found in the following documents on the Illumina website:
    , Using read outputs from high throughput sequencing (HTS) technologies, this tool provides metrics regarding the quality of read alignments to a reference sequence, as well as the proportion of the reads that passed machine signal-to-noise threshold quality filters (Illumina). Usage example: java -jar picard.jar CollectAlignmentSummaryMetrics \ R=reference_sequence.fasta \ I=input.bam \ O=output.txt Please see the AlignmentSummaryMetrics documentation (http://broadinstitute.github.io/picard/picard-metric-definitions.html#AlignmentSummaryMetrics) for detailed explanations of each metric. Additional information about Illumina's quality filters can be found in the following documents on the Illumina website: - hiseq-x-percent-pf-technical-note (http://support.illumina.com/content/dam/illumina-marketing/documents/products/technotes/hiseq-x-percent-pf-technical-note-770-2014-043.pdf) - hiseq-x-system-guide (http://support.illumina.com/content/dam/illumina-support/documents/documentation/system_documentation/hiseqx/hiseq-x-system-guide-15050091-d.pdf) )(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHtmlUnescape[0](<, <)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHtmlUnescape[1](x)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testHtmlUnescape[4]( x y< x , x<y y< x )(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[0](-15)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[1](-5)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[2](-2)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[3](1)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[4](0)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[5](2)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[6](5)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testIgnoringBoundaries[7](10)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testLongPreamble(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'FROBNICATION_FLAVOR' is required. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMissingRequiredArgument STANDARD_ERROR ERROR: Option 'FROBNICATION_FLAVOR' is required. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testMissingRequiredArgument(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testMutex[0](pass, [Ljava.lang.String;@41e5cbbc, true)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' is required unless any of [Y, Z, M, N] are specified. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[1](no args, [Ljava.lang.String;@6135201c, false) STANDARD_ERROR ERROR: Option 'A' is required unless any of [Y, Z, M, N] are specified. Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options] USAGE: MutexOptions [options] Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...] Usage: program [options...] Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[1](no args, [Ljava.lang.String;@6135201c, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'B' is required unless any of [Y, Z, M, N] are specified. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false) STANDARD_ERROR ERROR: Option 'B' is required unless any of [Y, Z, M, N] are specified. Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options] USAGE: MutexOptions [options] Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...] Usage: program [options...] Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[2](1 of group required, [Ljava.lang.String;@505de6dc, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' cannot be used in conjunction with option(s) Y Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[3](mutex, [Ljava.lang.String;@41b451d, false) STANDARD_ERROR ERROR: Option 'A' cannot be used in conjunction with option(s) Y Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options] USAGE: MutexOptions [options] Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...] Usage: program [options...] Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[3](mutex, [Ljava.lang.String;@41b451d, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'A' cannot be used in conjunction with option(s) Y Z M N Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false) STANDARD_ERROR ERROR: Option 'A' cannot be used in conjunction with option(s) Y Z M N Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: MutexOptions [options] USAGE: MutexOptions [options] Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: program [options...] Usage: program [options...] Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N A=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N B=String Undocumented option Required. Cannot be used in conjuction with option(s) Y Z M N Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z M=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z N=String Undocumented option Required. Cannot be used in conjuction with option(s) A B Y Z Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Y=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Z=String Undocumented option Required. Cannot be used in conjuction with option(s) A B M N Test: Test method testMutex[4](mega mutex, [Ljava.lang.String;@20cbf3cd, false)(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testNonASCIIAccept(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testNonASCIIReject(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testNonAsciiAssertion(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testNonAsciiConverted(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'SHMIGGLE_TYPE' must be specified at least 1 times. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNotEnoughOfListOption STANDARD_ERROR ERROR: Option 'SHMIGGLE_TYPE' must be specified at least 1 times. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testNotEnoughOfListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: At least 2 positional arguments must be specified. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNotEnoughPositional STANDARD_ERROR ERROR: At least 2 positional arguments must be specified. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testNotEnoughPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testNullValue STANDARD_ERROR ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptionsWithNullList [options] USAGE: FrobnicateOptionsWithNullList [options] Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Required. T=Integer Frobnication threshold setting. Required. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Default value: BAR. This option can be set to 'null' to clear the Undocumented option Default value: BAR. This option can be set to 'null' to clear the Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: default value. Possible values: {FOO, BAR, BAZ} default value. Possible values: {FOO, BAR, BAZ} Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option must be specified no more than 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option must be specified no more than 3 Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Default value: false. This option can be set to 'null' to clear the TRUTHINESS=Boolean Undocumented option Default value: false. This option can be set to 'null' to clear the Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: default value. Possible values: {true, false} default value. Possible values: {true, false} Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'. ERROR: non-null value must be provided for 'FROBNICATION_THRESHOLD'. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptionsWithNullList [options] USAGE: FrobnicateOptionsWithNullList [options] Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Required. T=Integer Frobnication threshold setting. Required. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Default value: BAR. This option can be set to 'null' to clear the Undocumented option Default value: BAR. This option can be set to 'null' to clear the Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: default value. Possible values: {FOO, BAR, BAZ} default value. Possible values: {FOO, BAR, BAZ} Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option must be specified no more than 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option must be specified no more than 3 Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Default value: false. This option can be set to 'null' to clear the TRUTHINESS=Boolean Undocumented option Default value: false. This option can be set to 'null' to clear the Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: default value. Possible values: {true, false} default value. Possible values: {true, false} Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testNullValue(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testOptionDefinitionCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'FROBNICATION_FLAVOR' cannot be specified more than once. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testOptionUseCaseClash STANDARD_ERROR ERROR: Option 'FROBNICATION_FLAVOR' cannot be specified more than once. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testOptionUseCaseClash(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testOptionsFile(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'T' cannot be specified more than once. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testOptionsFileWithDisallowedOverride STANDARD_ERROR ERROR: Option 'T' cannot be specified more than once. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testOptionsFileWithDisallowedOverride(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testPositive(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testPositiveTerminalEqualSign(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testPositiveWithSpaces(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testPositiveWithoutPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Option 'SHMIGGLE_TYPE' cannot be used more than 3 times. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testTooManyListOption STANDARD_ERROR ERROR: Option 'SHMIGGLE_TYPE' cannot be used more than 3 times. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line OPTIONS_FILE=File File of OPTION_NAME=value pairs. No positional parameters allowed. Unlike command-line Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: options, unrecognized options are ignored. A single-valued option set in an options file options, unrecognized options are ignored. A single-valued option set in an options file Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: may be overridden by a subsequent command-line option. A line starting with '#' is may be overridden by a subsequent command-line option. A line starting with '#' is Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: considered a comment. Required. considered a comment. Required. Test: Test method testTooManyListOption(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: No more than 2 positional arguments may be specified on the command line. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testTooManyPositional STANDARD_ERROR ERROR: No more than 2 positional arguments may be specified on the command line. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: FrobnicateOptions [options] USAGE: FrobnicateOptions [options] Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: frobnicate [options] input-file output-file Usage: frobnicate [options] input-file output-file Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Read input-file, frobnicate it, and write frobnicated results to output-file Read input-file, frobnicate it, and write frobnicated results to output-file Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testTooManyPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: ERROR: Invalid argument 'positional'. Gradle suite > Gradle test > org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest.testUnexpectedPositional STANDARD_ERROR ERROR: Invalid argument 'positional'. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: USAGE: OptionsWithoutPositional [options] USAGE: OptionsWithoutPositional [options] Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Usage: framistat [options] Usage: framistat [options] Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Compute the plebnick of the freebozzle. Compute the plebnick of the freebozzle. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Version: null Version: null Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Options: Options: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --help --help Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -h Displays options specific to this tool. -h Displays options specific to this tool. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --stdhelp --stdhelp Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: -H Displays options specific to this tool AND options common to all Picard command line -H Displays options specific to this tool AND options common to all Picard command line Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: tools. tools. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: --version Displays program version. --version Displays program version. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_THRESHOLD=Integer FROBNICATION_THRESHOLD=Integer Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to T=Integer Frobnication threshold setting. Default value: 20. This option can be set to 'null' to Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: clear the default value. clear the default value. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: FROBNICATION_FLAVOR=FrobnicationFlavor FROBNICATION_FLAVOR=FrobnicationFlavor Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Undocumented option Required. Possible values: {FOO, BAR, BAZ} Undocumented option Required. Possible values: {FOO, BAR, BAZ} Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 SHMIGGLE_TYPE=String Allowed shmiggle types. Default value: null. This option may be specified between 1 and 3 Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: times. times. Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} TRUTHINESS=Boolean Undocumented option Required. Possible values: {true, false} Test: Test method testUnexpectedPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) produced standard out/err: Running Test: Test method testUninitializedCollections(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testUsage(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testUsageWithDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testUsageWithoutPositional(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method testUsageWithoutPositionalWithDefault(org.broadinstitute.barclay.argparser.LegacyCommandLineArgumentParserTest) Running Test: Test method recognizedValues(org.broadinstitute.barclay.argparser.StrictBooleanConverterTest) Running Test: Test method unrecognizedValues(org.broadinstitute.barclay.argparser.StrictBooleanConverterTest) Running Test: Test method testBadTaggedArguments[0]([Ljava.lang.String;@3cdc3a4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[1]([Ljava.lang.String;@3f74e253)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[2]([Ljava.lang.String;@4671e8bc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[3]([Ljava.lang.String;@7c26eaf6)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[4]([Ljava.lang.String;@28c3fb07)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[5]([Ljava.lang.String;@42358ded)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[6]([Ljava.lang.String;@62ecce38)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[7]([Ljava.lang.String;@78986c6f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[8]([Ljava.lang.String;@29f66b9f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[9]([Ljava.lang.String;@30b23c18)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[10]([Ljava.lang.String;@165cf1e7)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[11]([Ljava.lang.String;@d8fc22c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[12]([Ljava.lang.String;@50ea005)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[13]([Ljava.lang.String;@3b6fd9ef)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[14]([Ljava.lang.String;@5a09103b)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[15]([Ljava.lang.String;@40529f97)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[16]([Ljava.lang.String;@29b1ca96)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[17]([Ljava.lang.String;@69bafd25)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[18]([Ljava.lang.String;@6970fd83)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[19]([Ljava.lang.String;@35e0b2ec)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[20]([Ljava.lang.String;@6a09c36)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[21]([Ljava.lang.String;@5423ce60)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[22]([Ljava.lang.String;@298f9465)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[23]([Ljava.lang.String;@2488af8d)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[24]([Ljava.lang.String;@3d91d692)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[25]([Ljava.lang.String;@230ebbfc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[26]([Ljava.lang.String;@3a009456)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[27]([Ljava.lang.String;@7205b96c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[28]([Ljava.lang.String;@7204fd9b)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[29]([Ljava.lang.String;@1818bbab)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[30]([Ljava.lang.String;@4221cebd)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[31]([Ljava.lang.String;@4b90599e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[32]([Ljava.lang.String;@c41e85e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[33]([Ljava.lang.String;@4397c815)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[34]([Ljava.lang.String;@6f7d5a32)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[35]([Ljava.lang.String;@4c8bb7c7)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[36]([Ljava.lang.String;@743753bc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[37]([Ljava.lang.String;@667311cc)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[38]([Ljava.lang.String;@4a134e8f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[39]([Ljava.lang.String;@53be37de)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[40]([Ljava.lang.String;@641b4e)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[41]([Ljava.lang.String;@1ee38c4a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[42]([Ljava.lang.String;@11a073e2)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[43]([Ljava.lang.String;@227ffef8)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[44]([Ljava.lang.String;@1ed77c34)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[45]([Ljava.lang.String;@759c7eb3)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[46]([Ljava.lang.String;@24763be7)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[47]([Ljava.lang.String;@53162a99)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[48]([Ljava.lang.String;@83e528c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[49]([Ljava.lang.String;@2bad0b9c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[50]([Ljava.lang.String;@36e312f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[51]([Ljava.lang.String;@3affed3f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[52]([Ljava.lang.String;@627900a9)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[53]([Ljava.lang.String;@26f202ea)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testBadTaggedArguments[54]([Ljava.lang.String;@133faa34)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGetCommandLineTagged[0]([Ljava.lang.String;@6fd46aed, TaggableArguments --tFullName:tumor gcs://my/tumor.bam --tScalar:taggableArgScalar foo --scalarArg 17)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGetCommandLineTagged[1]([Ljava.lang.String;@5a93cafb, TaggableArguments --tFullName:tumor,training=true,truth=false tumor.bam --tFullName:normal,training=false,truth=true normal.bam --tScalar:taggableArgScalar foo --scalarArg 17)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[0]([Ljava.lang.String;@1a5383c2, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@2bad1989, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@5425f913)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[1]([Ljava.lang.String;@163051b9, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@31ce1343, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@326a5d65)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[2]([Ljava.lang.String;@63691913, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@310275fb, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@2013cbc4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[3]([Ljava.lang.String;@74df4078, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@32d98e57, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@65a8fd62)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[4]([Ljava.lang.String;@3c92f80e, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@7e32eb0a, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@69f03e16)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[5]([Ljava.lang.String;@5c373d86, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@606803e8, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@780fcb65)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[6]([Ljava.lang.String;@4a55d9a1, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@3e18191d, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@5e06a318)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[7]([Ljava.lang.String;@45222a62, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@2d95eabf, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@7787f012)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[8]([Ljava.lang.String;@4f6f7c6b, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1360124e, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@fc31f6a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[9]([Ljava.lang.String;@647ed51d, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@ff93d6c, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@4dbf72a4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[10]([Ljava.lang.String;@1cba06dd, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1f1da831, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@15a66ec)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[11]([Ljava.lang.String;@7dcdd0c1, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@15aac164, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@6250851c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[12]([Ljava.lang.String;@7105e208, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@3b42d46a, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@72ebeae4)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[13]([Ljava.lang.String;@535533a, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@4c445cbe, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@99adb6a)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[14]([Ljava.lang.String;@6b5f5874, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@5127869e, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@2012fa2f)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[15]([Ljava.lang.String;@2c2f75f8, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@4aab13a2, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@9e010c)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[16]([Ljava.lang.String;@3356530e, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1599ad77, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@3ef74aa1)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testGoodTaggedArguments[17]([Ljava.lang.String;@3712bee3, [Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@1fcc83fd, [[Lorg.broadinstitute.barclay.argparser.TaggedArgumentTest$KeyValuePair;@374ddc1d)(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testMixedTagCollectionArgument(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testTaggedScalarArgument(org.broadinstitute.barclay.argparser.TaggedArgumentTest) Running Test: Test method testNonNullDoesNotThrow(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testNonNullThrows(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testNonNullWithMessageReturn(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testNonNullWithMessageThrows(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[0](hello hello hello hello hello, hello hello hello hello hello, 12)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[1](hello hello hello hello hello, hello hello hello hello hello, 11)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[2](hello hello hello hello hello, hello hello hello hello hello, 10)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[3](hello hello hello hello hello, hello hello hello hello hello, 10)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[4](hello hello hello hello hello, hello hello hello hello hello, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[5](hello hello hello hello hello , hello hello hello hello hello , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[6](hello hello hello hello hello , hello hello hello hello hello , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[7](, , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[8]( , , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[9]( , , 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[10](null, null, 20)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[11](hello, hello, 0)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[12](hello, hello, -1)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[13](a b c d e f g, a b c d e f g, 1)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[14](a b c d e f g, a b c d e f g, 0)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[15](a b c d e f g, a b c d e f g, -1)(org.broadinstitute.barclay.utils.UtilsUnitTest) Running Test: Test method testWrapParagraph[16](a b c d e f g, a b c d e f g, -1000)(org.broadinstitute.barclay.utils.UtilsUnitTest) Gradle Test Executor 1 finished executing tests. Results: SUCCESS (281 tests, 281 successes, 0 failures, 0 skipped) Finished generating test XML results (0.055 secs) into: /<>/build/test-results/test Generating HTML test report... Finished generating test html results (0.095 secs) into: /<>/build/reports/tests/test :test (Thread[Daemon worker,5,main]) completed. Took 5.754 secs. BUILD SUCCESSFUL in 13s 5 actionable tasks: 3 executed, 2 up-to-date make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=gradle --with javahelper,jh_maven_repo_helper dh_testroot -O--buildsystem=gradle dh_prep -O--buildsystem=gradle rm -f -- debian/libbarclay-java.substvars rm -fr -- debian/.debhelper/generated/libbarclay-java/ debian/libbarclay-java/ debian/tmp/ dh_auto_install -O--buildsystem=gradle install -d /<>/debian/libbarclay-java jh_installjavadoc -O--buildsystem=gradle dh_installdocs -O--buildsystem=gradle install -d debian/libbarclay-java/usr/share/doc/libbarclay-java install -d debian/.debhelper/generated/libbarclay-java install -p -m0644 debian/copyright debian/libbarclay-java/usr/share/doc/libbarclay-java/copyright dh_installchangelogs -O--buildsystem=gradle install -p -m0644 debian/changelog debian/libbarclay-java/usr/share/doc/libbarclay-java/changelog.Debian dh_installinit -O--buildsystem=gradle dh_perl -O--buildsystem=gradle dh_link -O--buildsystem=gradle jh_installlibs -O--buildsystem=gradle install -d debian/libbarclay-java/usr/share/java install -p -m0644 ./build/libs/barclay-2.1.0.jar debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar rm -f debian/libbarclay-java/usr/share/java/barclay.jar ln -s barclay-2.1.0.jar debian/libbarclay-java/usr/share/java/barclay.jar jh_classpath -O--buildsystem=gradle jh_manifest -plibbarclay-java "--classpath=/usr/lib/jvm/default-java/lib/tools.jar /usr/share/java/joptsimple.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar /usr/share/java/commons-lang3.jar /usr/share/java/gson.jar" debian/libbarclay-java/usr/share/java/barclay.jar Updating symlinked /<>/debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar (via debian/libbarclay-java/usr/share/java/barclay.jar) Reading manifest from /<>/debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar Updating manifest in /<>/debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar jh_manifest -O--buildsystem=gradle find debian/libbarclay-java -name '*.jar' Found symlink usr/share/java/barclay.jar Found usr/share/java/barclay-2.1.0.jar Reading manifest from debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar No update of debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar required. jh_exec -O--buildsystem=gradle jh_depends -O--buildsystem=gradle Searching /<>/debian/libbarclay-java for libbarclay-java Searching /<>/debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar Found Jars: /usr/lib/jvm/default-java/lib/tools.jar /usr/share/java/commons-lang3.jar /usr/share/java/gson.jar /usr/share/java/joptsimple.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar Checking: /<>/debian/libbarclay-java/usr/lib/jvm/default-java/lib/tools.jar Checking: /<>/debian/libbarclay-java/usr/share/java/commons-lang3.jar Checking: /<>/debian/libbarclay-java/usr/share/java/gson.jar Checking: /<>/debian/libbarclay-java/usr/share/java/joptsimple.jar Checking: /<>/debian/libbarclay-java/usr/share/java/log4j-api.jar Checking: /<>/debian/libbarclay-java/usr/share/java/log4j-core.jar Found Debs: libcommons-lang3-java libgoogle-gson-java libjoptsimple-java liblog4j2-java Adding substvars: java:Depends=libcommons-lang3-java, libgoogle-gson-java, libjoptsimple-java, liblog4j2-java java:Recommends= mh_installpoms -O--buildsystem=gradle mh_installpom --package=libbarclay-java --usj-name=barclay debian/pom-barclay.xml mh_cleanpom --package=libbarclay-java --rules=debian/maven.rules debian/pom-barclay.xml debian/.mh/pom.xml debian/.mh/pom.properties mv debian/.mh/pom.xml debian/.mh/barclay-debian.pom install -m 644 -D debian/.mh/barclay-2.1.0.pom debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.pom install -m 644 -D debian/.mh/barclay-debian.pom debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.pom mh_linkjars --skip-clean-poms -O--buildsystem=gradle mh_linkjar --package=libbarclay-java --skip-clean-pom debian/pom-barclay.xml /usr/share/java/barclay.jar dh_link -plibbarclay-java /usr/share/javabarclay.jar usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar rm -f debian/libbarclay-java/usr/share/java/barclay.jar ln -s barclay-2.1.0.jar debian/libbarclay-java/usr/share/java/barclay.jar rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar dh_link -plibbarclay-java /usr/share/javabarclay.jar usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar rm -f debian/libbarclay-java/usr/share/java/barclay.jar ln -s barclay-2.1.0.jar debian/libbarclay-java/usr/share/java/barclay.jar rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar rm -f debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar ln -s ../../../../../java/barclay.jar debian/libbarclay-java/usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar dh_strip_nondeterminism -O--buildsystem=gradle Using 1547717872 as canonical time Normalizing debian/libbarclay-java/usr/share/java/barclay-2.1.0.jar using File::StripNondeterminism::handlers::jar dh_compress -O--buildsystem=gradle cd debian/libbarclay-java chmod a-x usr/share/doc/libbarclay-java/changelog.Debian gzip -9nf usr/share/doc/libbarclay-java/changelog.Debian cd '/<>' dh_fixperms -O--buildsystem=gradle find debian/libbarclay-java -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libbarclay-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libbarclay-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libbarclay-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libbarclay-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libbarclay-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--buildsystem=gradle dh_installdeb -O--buildsystem=gradle install -d debian/libbarclay-java/DEBIAN rm -f debian/libbarclay-java.debhelper.log debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' cat debian/control \ | sed -e '/^Build-.*Depends:/,/^[^[:space:]#]/{s/^Build-.*Depends:/ /;p};d' \ | grep '^[[:space:]]' \ | tr ',' '\n' \ > debian/bd-temp-substvars echo -n "bd:barclay-java=" > debian/bd.substvars grep 'libbarclay-java ' debian/bd-temp-substvars \ | tr "\n" "," \ | sed -e 's/[[:space:]]\+/ /g;s/,$/\n/' \ >> debian/bd.substvars dh_gencontrol -O--buildsystem=gradle -- -Tdebian/bd.substvars echo misc:Depends= >> debian/libbarclay-java.substvars echo misc:Pre-Depends= >> debian/libbarclay-java.substvars dpkg-gencontrol -plibbarclay-java -ldebian/changelog -Tdebian/libbarclay-java.substvars -Pdebian/libbarclay-java -UMulti-Arch -Tdebian/bd.substvars dpkg-gencontrol: warning: Depends field of package libbarclay-java: substitution variable ${maven:Depends} used, but is not defined dpkg-gencontrol: warning: package libbarclay-java: substitution variable ${java:Depends} unused, but is defined chmod 0644 -- debian/libbarclay-java/DEBIAN/control chown 0:0 -- debian/libbarclay-java/DEBIAN/control make[1]: Leaving directory '/<>' dh_md5sums -O--buildsystem=gradle cd debian/libbarclay-java >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libbarclay-java/DEBIAN/md5sums chown 0:0 -- debian/libbarclay-java/DEBIAN/md5sums dh_builddeb -O--buildsystem=gradle dpkg-deb --build debian/libbarclay-java .. INFO: pkgstriptranslations version 143 pkgstriptranslations: processing libbarclay-java (in debian/libbarclay-java); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbarclay-java/DEBIAN/control, package libbarclay-java, directory debian/libbarclay-java pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbarclay-java ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbarclay-java' in '../libbarclay-java_2.1.0-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../barclay_2.1.0-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190118-2328 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ barclay_2.1.0-3_amd64.changes: ------------------------------ Format: 1.8 Date: Thu, 17 Jan 2019 09:37:52 +0000 Source: barclay Binary: libbarclay-java Architecture: all Version: 2.1.0-3 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Olivier Sallou Description: libbarclay-java - Java library to parse command line Closes: 906973 Changes: barclay (2.1.0-3) unstable; urgency=medium . * Fix FTBS tests (Closes: #906973). Checksums-Sha1: faf477442c5f33dd0685654e92ca891b820617cf 16812 barclay_2.1.0-3_amd64.buildinfo d97cb99ba060420c7afdb8859e7cd94c9a4729a5 115736 libbarclay-java_2.1.0-3_all.deb Checksums-Sha256: 4168536c9ba3c896f4b1b52fffefa139561789f5a9fee197d32c649c63a6c740 16812 barclay_2.1.0-3_amd64.buildinfo fd6b68a6686d8bead2fb62941037a14c5ae16cc763156ec42969008dbb52b217 115736 libbarclay-java_2.1.0-3_all.deb Files: a30c31c2eb6230e5fde8322360300d25 16812 java optional barclay_2.1.0-3_amd64.buildinfo a0fa9e950094dc82ceb00e68c00425d4 115736 java optional libbarclay-java_2.1.0-3_all.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbarclay-java_2.1.0-3_all.deb ------------------------------- new debian package, version 2.0. size 115736 bytes: control archive=844 bytes. 689 bytes, 17 lines control 439 bytes, 5 lines md5sums Package: libbarclay-java Source: barclay Version: 2.1.0-3 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Java Maintainers Installed-Size: 145 Depends: libfreemarker-java, libjoptsimple-java, liblog4j2-java Section: java Priority: optional Homepage: https://github.com/broadinstitute/barclay Description: Java library to parse command line Command line argument parser and online documentation generation utilities for java command line programs. . Barclay is a set of classes for annotating, parsing, validating, and generating documentation for command line options. drwxr-xr-x root/root 0 2019-01-17 09:37 ./ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/doc/libbarclay-java/ -rw-r--r-- root/root 269 2019-01-17 09:37 ./usr/share/doc/libbarclay-java/changelog.Debian.gz -rw-r--r-- root/root 3286 2019-01-17 09:37 ./usr/share/doc/libbarclay-java/copyright drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/java/ -rw-r--r-- root/root 120382 2019-01-17 09:37 ./usr/share/java/barclay-2.1.0.jar lrwxrwxrwx root/root 0 2019-01-17 09:37 ./usr/share/java/barclay.jar -> barclay-2.1.0.jar drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/ drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/ lrwxrwxrwx root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.jar -> ../../../../../java/barclay.jar -rw-r--r-- root/root 2246 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/2.1.0/barclay-2.1.0.pom drwxr-xr-x root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/debian/ lrwxrwxrwx root/root 0 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.jar -> ../../../../../java/barclay.jar -rw-r--r-- root/root 2247 2019-01-17 09:37 ./usr/share/maven-repo/org/broadinstitute/barclay/debian/barclay-debian.pom +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 6140 Build-Time: 27 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 65 Job: barclay_2.1.0-3.dsc Machine Architecture: amd64 Package: barclay Package-Time: 93 Source-Version: 2.1.0-3 Space: 6140 Status: successful Version: 2.1.0-3 -------------------------------------------------------------------------------- Finished at 20190118-2328 Build needed 00:01:33, 6140k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16295201 Scanning for processes to kill in build PACKAGEBUILD-16295201