bio-eagle 2.3-3 source package in Ubuntu

Changelog

bio-eagle (2.3-3) unstable; urgency=medium

  * Remove the test which creates a false positive in the autopkgtest
    by emitting some warnings. (Closes: #842356)

 -- Dylan Aïssi <email address hidden>  Sun, 30 Oct 2016 23:26:33 +0100

Upload details

Uploaded by:
Debian Med on 2016-11-03
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Zesty release on 2016-11-03 universe misc

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File Size SHA-256 Checksum
bio-eagle_2.3-3.dsc 2.1 KiB d421e678c85ea39217b0f81273e306b173130dc06dc36f9d1981f79ddf9beada
bio-eagle_2.3.orig.tar.gz 1.6 MiB 1fda260a68813f9def280ef36d5020d622e8afb49544504e7d112b9c277210f8
bio-eagle_2.3-3.debian.tar.xz 6.4 KiB 63479516647de87a1bb34b8bea4d05424095f508b3c67e715eb8f4091daf3d00

Available diffs

No changes file available.

Binary packages built by this source

bio-eagle: Haplotype phasing within a genotyped cohort or using a phased reference panel

 Eagle estimates haplotype phase either within a genotyped cohort or using a
 phased reference panel. The basic idea of the Eagle1 algorithm is to harness
 identity-by-descent among distant relatives—which is pervasive at very large
 sample sizes but rare among smaller numbers of samples—to rapidly call phase
 using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
 full probabilistic model similar to the diploid Li-Stephens model used by
 previous HMM-based methods.
 .
 Please note: The executable was renamed to bio-eagle because of a name clash.
 Please read more about this in /usr/share/doc/bio-eagle/README.Debian.

bio-eagle-dbgsym: debug symbols for package bio-eagle

 Eagle estimates haplotype phase either within a genotyped cohort or using a
 phased reference panel. The basic idea of the Eagle1 algorithm is to harness
 identity-by-descent among distant relatives—which is pervasive at very large
 sample sizes but rare among smaller numbers of samples—to rapidly call phase
 using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
 full probabilistic model similar to the diploid Li-Stephens model used by
 previous HMM-based methods.
 .
 Please note: The executable was renamed to bio-eagle because of a name clash.
 Please read more about this in /usr/share/doc/bio-eagle/README.Debian.

bio-eagle-examples: Examples for bio-eagle

 Eagle estimates haplotype phase either within a genotyped cohort or using a
 phased reference panel. The basic idea of the Eagle1 algorithm is to harness
 identity-by-descent among distant relatives—which is pervasive at very large
 sample sizes but rare among smaller numbers of samples—to rapidly call phase
 using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
 full probabilistic model similar to the diploid Li-Stephens model used by
 previous HMM-based methods.
 .
 This package provides some example data for eagle.