biobambam2 2.0.153+ds-1 source package in Ubuntu


biobambam2 (2.0.153+ds-1) unstable; urgency=medium

  [ Steffen Moeller ]
  * d/control: Updated policy to 4.5.0
  * d/changelog: Also excluding config.guess and config.sub
  * d/watch:
    - Changed version suffix dfsg to ds
    - Changed compression from .bz2 to .xz

  [ Andreas Tille ]
  * Versioned Build-Depends: libmaus2-dev (>= 2.0.695)
    Closes: #950643
  * New upstream version
  * Standards-Version: 4.5.0 (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit.

 -- Andreas Tille <email address hidden>  Wed, 05 Feb 2020 10:51:35 +0100

Upload details

Uploaded by:
Debian Med on 2020-02-05
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal proposed on 2020-02-05 universe misc


File Size SHA-256 Checksum
biobambam2_2.0.153+ds-1.dsc 2.0 KiB 4954dad5a6d55c5d183fab876e86473e562889c5043334127ba96d3162233ecf
biobambam2_2.0.153+ds.orig.tar.xz 225.7 KiB ff57cb9ff71c7bf1b7f7a6c6df36561283d4d177fd3a8779e2475d06741198c9
biobambam2_2.0.153+ds-1.debian.tar.xz 3.3 KiB 1daa8578328fd12b62cb897f2016d1e2c2aed33a91e0a57e4cd47d6f2cdf1f3d

Available diffs

No changes file available.

Binary packages built by this source

biobambam2: tools for early stage alignment file processing

 This package contains some tools for processing BAM files including
   bamsormadup: parallel sorting and duplicate marking
   bamcollate2: reads BAM and writes BAM reordered such that alignment
                 or collated by query name
   bammarkduplicates: reads BAM and writes BAM with duplicate alignments
                 marked using the BAM flags field
   bammaskflags: reads BAM and writes BAM while masking (removing) bits
                 from the flags column
   bamrecompress: reads BAM and writes BAM with a defined compression
                  setting. This tool is capable of multi-threading.
   bamsort: reads BAM and writes BAM resorted by coordinates or
                  query name
   bamtofastq: reads BAM and writes FastQ; output can be collated
                  or uncollated by query name

biobambam2-dbgsym: debug symbols for biobambam2