https://launchpad.net/ubuntu/+source/caftools/2.0.3-1/+build/19326327 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-007 4.4.0-178-generic #208-Ubuntu SMP Sun Apr 5 23:45:22 UTC 2020 ppc64le Buildd toolchain package versions: launchpad-buildd_189 python-lpbuildd_189 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.9 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 19 May 23:18:43 ntpdate[1884]: 10.211.37.1 rate limit response from server. 19 May 23:18:43 ntpdate[1884]: adjust time server 10.211.37.1 offset 0.000436 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19326327 --image-type chroot /home/buildd/filecache-default/2b938910cc1b05b915dfd011059e884e9b102147 Creating target for build PACKAGEBUILD-19326327 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19326327 Starting target for build PACKAGEBUILD-19326327 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19326327 'deb http://ftpmaster.internal/ubuntu groovy main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu groovy-security main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu groovy-updates main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-19326327 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19326327 Updating target for build PACKAGEBUILD-19326327 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [268 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [119 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el Packages [937 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [507 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/restricted ppc64el Packages [1288 B] Get:8 http://ftpmaster.internal/ubuntu groovy/restricted Translation-en [6212 B] Get:9 http://ftpmaster.internal/ubuntu groovy/universe ppc64el Packages [8492 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5176 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/multiverse ppc64el Packages [122 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/multiverse Translation-en [106 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el Packages [45.1 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [24.3 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/restricted Translation-en [1196 B] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el Packages [489 kB] Get:17 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [318 kB] Get:18 http://ftpmaster.internal/ubuntu groovy-proposed/multiverse ppc64el Packages [9976 B] Get:19 http://ftpmaster.internal/ubuntu groovy-proposed/multiverse Translation-en [9148 B] Fetched 16.8 MB in 4s (4333 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files binutils binutils-common binutils-powerpc64le-linux-gnu cpp-9 dash debconf e2fsprogs g++-9 gcc-10-base gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv libacl1 libapparmor1 libapt-pkg6.0 libasan5 libatomic1 libbinutils libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libext2fs2 libgcc-9-dev libgcc-s1 libgomp1 libidn2-0 libitm1 liblsan0 libncurses6 libncursesw6 libperl5.30 libprocps8 libquadmath0 libseccomp2 libsqlite3-0 libss2 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 linux-libc-dev logsave make ncurses-base ncurses-bin perl perl-base perl-modules-5.30 procps systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata 67 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 51.3 MB of archives. After this operation, 227 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcrypt-dev ppc64el 1:4.4.15-1ubuntu1 [139 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcrypt1 ppc64el 1:4.4.15-1ubuntu1 [105 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main ppc64el base-files ppc64el 11ubuntu7 [60.3 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el perl-modules-5.30 all 5.30.2-1 [2740 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libperl5.30 ppc64el 5.30.2-1 [3907 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el perl ppc64el 5.30.2-1 [224 kB] Get:7 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el perl-base ppc64el 5.30.2-1 [1496 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main ppc64el debconf all 1.5.74 [121 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main ppc64el dash ppc64el 0.5.10.2-7 [100 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main ppc64el ncurses-bin ppc64el 6.2-1 [180 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main ppc64el ncurses-base all 6.2-1 [18.7 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main ppc64el sysvinit-utils ppc64el 2.96-3ubuntu1 [22.8 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main ppc64el libatomic1 ppc64el 10.1.0-2ubuntu1 [9992 B] Get:14 http://ftpmaster.internal/ubuntu groovy/main ppc64el libubsan1 ppc64el 10.1.0-2ubuntu1 [149 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtsan0 ppc64el 10.1.0-2ubuntu1 [326 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main ppc64el libquadmath0 ppc64el 10.1.0-2ubuntu1 [153 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblsan0 ppc64el 10.1.0-2ubuntu1 [156 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main ppc64el libitm1 ppc64el 10.1.0-2ubuntu1 [28.5 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgomp1 ppc64el 10.1.0-2ubuntu1 [108 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main ppc64el gcc-10-base ppc64el 10.1.0-2ubuntu1 [20.2 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgcc-s1 ppc64el 10.1.0-2ubuntu1 [30.3 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcc1-0 ppc64el 10.1.0-2ubuntu1 [41.9 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstdc++6 ppc64el 10.1.0-2ubuntu1 [546 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd-sysv ppc64el 245.5-2ubuntu2 [10.3 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd-timesyncd ppc64el 245.5-2ubuntu2 [28.6 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main ppc64el libacl1 ppc64el 2.2.53-8 [20.5 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el libapparmor1 ppc64el 2.13.3-7ubuntu6 [38.1 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcap2 ppc64el 1:2.34-2 [17.8 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcryptsetup12 ppc64el 2:2.3.1-1ubuntu1 [226 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main ppc64el libidn2-0 ppc64el 2.3.0-1 [55.8 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main ppc64el libseccomp2 ppc64el 2.4.3-1ubuntu2 [47.1 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main ppc64el systemd ppc64el 245.5-2ubuntu2 [4587 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsystemd0 ppc64el 245.5-2ubuntu2 [311 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main ppc64el libudev1 ppc64el 245.5-2ubuntu2 [92.0 kB] Get:35 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libapt-pkg6.0 ppc64el 2.1.4 [905 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main ppc64el gpgv ppc64el 2.2.20-1ubuntu1 [232 kB] Get:37 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el apt ppc64el 2.1.4 [1317 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main ppc64el logsave ppc64el 1.45.6-1ubuntu1 [10.8 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main ppc64el libext2fs2 ppc64el 1.45.6-1ubuntu1 [215 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main ppc64el e2fsprogs ppc64el 1.45.6-1ubuntu1 [557 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main ppc64el libncurses6 ppc64el 6.2-1 [120 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main ppc64el libncursesw6 ppc64el 6.2-1 [152 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtinfo6 ppc64el 6.2-1 [102 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcom-err2 ppc64el 1.45.6-1ubuntu1 [10.1 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main ppc64el libprocps8 ppc64el 2:3.3.16-4ubuntu1 [35.9 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main ppc64el libss2 ppc64el 1.45.6-1ubuntu1 [12.4 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main ppc64el procps ppc64el 2:3.3.16-4ubuntu1 [250 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsqlite3-0 ppc64el 3.31.1-5 [577 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main ppc64el tzdata all 2020a-0ubuntu1 [293 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main ppc64el libctf0 ppc64el 2.34-7ubuntu1 [52.8 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.34-7ubuntu1 [1747 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main ppc64el libbinutils ppc64el 2.34-7ubuntu1 [514 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils ppc64el 2.34-7ubuntu1 [3368 B] Get:54 http://ftpmaster.internal/ubuntu groovy/main ppc64el binutils-common ppc64el 2.34-7ubuntu1 [207 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main ppc64el libctf-nobfd0 ppc64el 2.34-7ubuntu1 [53.5 kB] Get:56 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libasan5 ppc64el 9.3.0-13ubuntu1 [408 kB] Get:57 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el g++-9 ppc64el 9.3.0-13ubuntu1 [7751 kB] Get:58 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el gcc-9 ppc64el 9.3.0-13ubuntu1 [7557 kB] Get:59 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libstdc++-9-dev ppc64el 9.3.0-13ubuntu1 [1752 kB] Get:60 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libgcc-9-dev ppc64el 9.3.0-13ubuntu1 [1260 kB] Get:61 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el cpp-9 ppc64el 9.3.0-13ubuntu1 [6835 kB] Get:62 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el gcc-9-base ppc64el 9.3.0-13ubuntu1 [19.7 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main ppc64el gpg ppc64el 2.2.20-1ubuntu1 [539 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main ppc64el gpgconf ppc64el 2.2.20-1ubuntu1 [143 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main ppc64el gpg-agent ppc64el 2.2.20-1ubuntu1 [267 kB] Get:66 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el linux-libc-dev ppc64el 5.4.0-29.33 [1093 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main ppc64el make ppc64el 4.2.1-2 [171 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 51.3 MB in 1s (69.5 MB/s) (Reading database ... 12761 files and directories currently installed.) 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Setting up libapparmor1:ppc64el (2.13.3-7ubuntu6) ... Setting up perl-modules-5.30 (5.30.2-1) ... Setting up libsqlite3-0:ppc64el (3.31.1-5) ... Setting up binutils-common:ppc64el (2.34-7ubuntu1) ... Setting up linux-libc-dev:ppc64el (5.4.0-29.33) ... Setting up libctf-nobfd0:ppc64el (2.34-7ubuntu1) ... Setting up libcom-err2:ppc64el (1.45.6-1ubuntu1) ... Setting up libgomp1:ppc64el (10.1.0-2ubuntu1) ... Setting up libcap2:ppc64el (1:2.34-2) ... Setting up tzdata (2020a-0ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue May 19 23:19:04 UTC 2020. Universal Time is now: Tue May 19 23:19:04 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up make (4.2.1-2) ... Setting up libncurses6:ppc64el (6.2-1) ... Setting up libquadmath0:ppc64el (10.1.0-2ubuntu1) ... Setting up libatomic1:ppc64el (10.1.0-2ubuntu1) ... Setting up libss2:ppc64el (1.45.6-1ubuntu1) ... Setting up libncursesw6:ppc64el (6.2-1) ... Setting up logsave (1.45.6-1ubuntu1) ... Setting up libubsan1:ppc64el (10.1.0-2ubuntu1) ... Setting up libcrypt-dev:ppc64el (1:4.4.15-1ubuntu1) ... Setting up gpgconf (2.2.20-1ubuntu1) ... Setting up libperl5.30:ppc64el (5.30.2-1) ... Setting up libcryptsetup12:ppc64el (2:2.3.1-1ubuntu1) ... Setting up libbinutils:ppc64el (2.34-7ubuntu1) ... Setting up libcc1-0:ppc64el (10.1.0-2ubuntu1) ... Setting up gpg (2.2.20-1ubuntu1) ... Setting up liblsan0:ppc64el (10.1.0-2ubuntu1) ... Setting up libprocps8:ppc64el (2:3.3.16-4ubuntu1) ... Setting up libitm1:ppc64el (10.1.0-2ubuntu1) ... Setting up gcc-9-base:ppc64el (9.3.0-13ubuntu1) ... Setting up libtsan0:ppc64el (10.1.0-2ubuntu1) ... Setting up libctf0:ppc64el (2.34-7ubuntu1) ... Setting up gpg-agent (2.2.20-1ubuntu1) ... Setting up e2fsprogs (1.45.6-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... Setting up libasan5:ppc64el (9.3.0-13ubuntu1) ... Setting up perl (5.30.2-1) ... Setting up procps (2:3.3.16-4ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Removing obsolete conffile /etc/sysctl.d/10-link-restrictions.conf ... Setting up cpp-9 (9.3.0-13ubuntu1) ... Setting up binutils-powerpc64le-linux-gnu (2.34-7ubuntu1) ... Setting up binutils (2.34-7ubuntu1) ... Setting up libgcc-9-dev:ppc64el (9.3.0-13ubuntu1) ... Setting up gcc-9 (9.3.0-13ubuntu1) ... Setting up libstdc++-9-dev:ppc64el (9.3.0-13ubuntu1) ... Setting up g++-9 (9.3.0-13ubuntu1) ... Setting up systemd-timesyncd (245.5-2ubuntu2) ... Setting up systemd (245.5-2ubuntu2) ... Initializing machine ID from random generator. Setting up systemd-sysv (245.5-2ubuntu2) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19326327 ppc64el groovy-proposed -c chroot:build-PACKAGEBUILD-19326327 --arch=ppc64el --dist=groovy-proposed --nolog caftools_2.0.3-1.dsc Initiating build PACKAGEBUILD-19326327 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-178-generic #208-Ubuntu SMP Sun Apr 5 23:45:22 UTC 2020 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-ppc64el-007.buildd +==============================================================================+ | caftools 2.0.3-1 (ppc64el) 19 May 2020 23:19 | +==============================================================================+ Package: caftools Version: 2.0.3-1 Source Version: 2.0.3-1 Distribution: groovy-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/caftools-2E49IM/caftools-2.0.3' with '<>' I: NOTICE: Log filtering will replace 'build/caftools-2E49IM' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19326327/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- caftools_2.0.3-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-k_k9Ug/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-k_k9Ug/apt_archive ./ InRelease Get:2 copy:/<>/resolver-k_k9Ug/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-k_k9Ug/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-k_k9Ug/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-k_k9Ug/apt_archive ./ Packages [529 B] Fetched 2862 B in 0s (165 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-k_k9Ug/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12761 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11), autotools-dev Filtered Build-Depends: debhelper (>= 11), autotools-dev dpkg-deb: building package 'sbuild-build-depends-caftools-dummy' in '/<>/resolver-2F1QOl/apt_archive/sbuild-build-depends-caftools-dummy.deb'. Ign:1 copy:/<>/resolver-2F1QOl/apt_archive ./ InRelease Get:2 copy:/<>/resolver-2F1QOl/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-2F1QOl/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-2F1QOl/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-2F1QOl/apt_archive ./ Packages [533 B] Fetched 2866 B in 0s (147 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install caftools build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-caftools-dummy 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 17.7 MB of archives. After this operation, 74.0 MB of additional disk space will be used. Get:1 copy:/<>/resolver-2F1QOl/apt_archive ./ sbuild-build-depends-caftools-dummy 0.invalid.0 [864 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main ppc64el libbsd0 ppc64el 0.10.0-1 [55.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main ppc64el bsdmainutils ppc64el 11.1.2ubuntu3 [187 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main ppc64el libuchardet0 ppc64el 0.0.6-3build1 [67.9 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el groff-base ppc64el 1.22.4-5 [922 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpipeline1 ppc64el 1.5.2-2build1 [28.9 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main ppc64el man-db ppc64el 2.9.1-1 [1143 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libmagic-mgc ppc64el 1:5.38-5 [218 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libmagic1 ppc64el 1:5.38-5 [93.2 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el file ppc64el 1:5.38-5 [24.2 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main ppc64el libelf1 ppc64el 0.176-1.1build1 [53.4 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglib2.0-0 ppc64el 2.64.2-1 [1381 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main ppc64el libicu66 ppc64el 66.1-2ubuntu2 [8595 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml2 ppc64el 2.9.10+dfsg-5 [671 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext-base ppc64el 0.19.8.1-10build1 [52.5 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsigsegv2 ppc64el 2.12-2 [13.9 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main ppc64el m4 ppc64el 1.4.18-4 [210 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main ppc64el autoconf all 2.69-11.1 [321 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main ppc64el automake all 1:1.16.1-4ubuntu6 [522 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main ppc64el autopoint all 0.19.8.1-10build1 [412 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtool all 2.4.6-14 [161 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdebhelper-perl all 13ubuntu1 [62.5 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-stripnondeterminism-perl all 1.8.0-1 [16.2 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-strip-nondeterminism all 1.8.0-1 [5228 B] Get:29 http://ftpmaster.internal/ubuntu groovy/main ppc64el dwz ppc64el 0.13-5 [136 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcroco3 ppc64el 0.6.13-1 [92.1 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext ppc64el 0.19.8.1-10build1 [959 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main ppc64el po-debconf all 1.0.21 [233 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main ppc64el debhelper all 13ubuntu1 [877 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.7 MB in 0s (65.4 MB/s) Selecting previously unselected package libbsd0:ppc64el. (Reading database ... 12761 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_ppc64el.deb ... Unpacking libbsd0:ppc64el (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu3_ppc64el.deb ... Unpacking bsdmainutils (11.1.2ubuntu3) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../02-libuchardet0_0.0.6-3build1_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.6-3build1) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-5_ppc64el.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../04-libpipeline1_1.5.2-2build1_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_ppc64el.deb ... Unpacking man-db (2.9.1-1) ... 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Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../12-libxml2_2.9.10+dfsg-5_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.10+dfsg-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../13-gettext-base_0.19.8.1-10build1_ppc64el.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:ppc64el. Preparing to unpack .../14-libsigsegv2_2.12-2_ppc64el.deb ... Unpacking libsigsegv2:ppc64el (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../15-m4_1.4.18-4_ppc64el.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../16-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../17-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../18-automake_1%3a1.16.1-4ubuntu6_all.deb ... Unpacking automake (1:1.16.1-4ubuntu6) ... Selecting previously unselected package autopoint. Preparing to unpack .../19-autopoint_0.19.8.1-10build1_all.deb ... Unpacking autopoint (0.19.8.1-10build1) ... Selecting previously unselected package libtool. Preparing to unpack .../20-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../21-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13ubuntu1_all.deb ... Unpacking libdebhelper-perl (13ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../23-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. 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Selecting previously unselected package intltool-debian. Preparing to unpack .../30-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../31-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../32-debhelper_13ubuntu1_all.deb ... Unpacking debhelper (13ubuntu1) ... Selecting previously unselected package sbuild-build-depends-caftools-dummy. Preparing to unpack .../33-sbuild-build-depends-caftools-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-caftools-dummy (0.invalid.0) ... Setting up libpipeline1:ppc64el (1.5.2-2build1) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:ppc64el (2.64.2-1) ... No schema files found: doing nothing. Setting up libicu66:ppc64el (66.1-2ubuntu2) ... Setting up libdebhelper-perl (13ubuntu1) ... Setting up libmagic1:ppc64el (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:ppc64el (2.12-2) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libuchardet0:ppc64el (0.0.6-3build1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libbsd0:ppc64el (0.10.0-1) ... Setting up libelf1:ppc64el (0.176-1.1build1) ... Setting up libxml2:ppc64el (2.9.10+dfsg-5) ... Setting up libfile-stripnondeterminism-perl (1.8.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:ppc64el (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (13ubuntu1) ... Setting up sbuild-build-depends-caftools-dummy (0.invalid.0) ... Setting up dh-autoreconf (19) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-178-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.34-7ubuntu1 dpkg-dev_1.19.7ubuntu3 g++-9_9.3.0-13ubuntu1 gcc-9_9.3.0-13ubuntu1 libc6-dev_2.31-0ubuntu9 libstdc++-9-dev_9.3.0-13ubuntu1 libstdc++6_10.1.0-2ubuntu1 linux-libc-dev_5.4.0-29.33 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu7 base-passwd_3.5.47 bash_5.0-6ubuntu1 binutils_2.34-7ubuntu1 binutils-common_2.34-7ubuntu1 binutils-powerpc64le-linux-gnu_2.34-7ubuntu1 bsdmainutils_11.1.2ubuntu3 bsdutils_1:2.34-0.1ubuntu9 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110ubuntu1 coreutils_8.30-3ubuntu2 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-13ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu3 dpkg-dev_1.19.7ubuntu3 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu9 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-13ubuntu1 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10.1.0-2ubuntu1 gcc-9_9.3.0-13ubuntu1 gcc-9-base_9.3.0-13ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-0ubuntu4 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-13ubuntu1 libassuan0_2.5.3-7ubuntu2 libatomic1_10.1.0-2ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.34-7ubuntu1 libblkid1_2.34-0.1ubuntu9 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.31-0ubuntu9 libc-dev-bin_2.31-0ubuntu9 libc6_2.31-0ubuntu9 libc6-dev_2.31-0ubuntu9 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.34-2 libcc1-0_10.1.0-2ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1ubuntu1 libcrypt1_1:4.4.15-1ubuntu1 libcryptsetup12_2:2.3.1-1ubuntu1 libctf-nobfd0_2.34-7ubuntu1 libctf0_2.34-7ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.251ubuntu1 libdebhelper-perl_13ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu1 libdpkg-perl_1.19.7ubuntu3 libelf1_0.176-1.1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu9 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.0-1 libgcc-9-dev_9.3.0-13ubuntu1 libgcc-s1_10.1.0-2ubuntu1 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2ubuntu1 libgomp1_10.1.0-2ubuntu1 libgpg-error0_1.37-1 libhogweed5_3.5.1+really3.5.1-2 libicu66_66.1-2ubuntu2 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10.1.0-2ubuntu1 libjson-c4_0.13.1+dfsg-7 libkmod2_27-1ubuntu2 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.1.0-2ubuntu1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.34-0.1ubuntu9 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.30_5.30.2-1 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-4ubuntu1 libquadmath0_10.1.0-2ubuntu1 libreadline8_8.0-4 libseccomp2_2.4.3-1ubuntu2 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 libsemanage1_3.0-1build2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu9 libsqlite3-0_3.31.1-5 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu2 libstdc++-9-dev_9.3.0-13ubuntu1 libstdc++6_10.1.0-2ubuntu1 libsub-override-perl_0.09-2 libsystemd0_245.5-2ubuntu2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-2ubuntu1 libubsan1_10.1.0-2ubuntu1 libuchardet0_0.0.6-3build1 libudev1_245.5-2ubuntu2 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu9 libxml2_2.9.10+dfsg-5 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.0-29.33 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu5 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1ubuntu9 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu2 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu5 patch_2.7.6-6 perl_5.30.2-1 perl-base_5.30.2-1 perl-modules-5.30_5.30.2-1 pinentry-curses_1.1.0-3build1 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-4ubuntu1 readline-common_8.0-4 sbuild-build-depends-caftools-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.5-2ubuntu2 systemd-sysv_245.5-2ubuntu2 systemd-timesyncd_245.5-2ubuntu2 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.02.11.2 util-linux_2.34-0.1ubuntu9 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue May 19 14:22:55 2020 UTC gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: issuer "moeller@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./caftools_2.0.3-1.dsc dpkg-source: info: extracting caftools in caftools-2.0.3 dpkg-source: info: unpacking caftools_2.0.3.orig.tar.gz dpkg-source: info: unpacking caftools_2.0.3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying messubs.patch dpkg-source: info: applying autoconf.patch dpkg-source: info: applying do_not_fail_building_man_pages.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19326327 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19326327 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19326327 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package caftools dpkg-buildpackage: info: source version 2.0.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f man/Makefile make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/caftools.substvars debian/files rm -fr -- debian/caftools/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a install -d debian/.debhelper/bucket/files cp -an --reflink=auto build-aux/config.guess debian/.debhelper/bucket/files/d5ef0b47e2e7c17c69a74baa0ce4042f175099b61cf6fd36105d983f2ca0743a.tmp mv debian/.debhelper/bucket/files/d5ef0b47e2e7c17c69a74baa0ce4042f175099b61cf6fd36105d983f2ca0743a.tmp debian/.debhelper/bucket/files/d5ef0b47e2e7c17c69a74baa0ce4042f175099b61cf6fd36105d983f2ca0743a cp -f /usr/share/misc/config.guess ./build-aux/config.guess cp -an --reflink=auto build-aux/config.sub debian/.debhelper/bucket/files/080410134d69913922d3da130c19dfadf9c1bcdf2c84ac073b5bfe4b57d3647c.tmp mv debian/.debhelper/bucket/files/080410134d69913922d3da130c19dfadf9c1bcdf2c84ac073b5bfe4b57d3647c.tmp debian/.debhelper/bucket/files/080410134d69913922d3da130c19dfadf9c1bcdf2c84ac073b5bfe4b57d3647c cp -f /usr/share/misc/config.sub ./build-aux/config.sub dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.in autoreconf -f -i aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:4: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.in:4: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.in:201: installing 'build-aux/compile' Makefile.am: installing './INSTALL' src/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' src/libsrc/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tests/Makefile.am:21: warning: patsubst %,%-test,$(PROGS: non-POSIX variable name tests/Makefile.am:21: (probably a GNU make extension) find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after dh_auto_configure -a ./configure --build=powerpc64le-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --libexecdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for C compiler warning flags... -Wall checking whether make sets $(MAKE)... (cached) yes checking for ranlib... ranlib checking for fread_reading in -lread... no checking for perl... /usr/bin/perl checking for perl 5.002 or better... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/wait.h that is POSIX.1 compatible... yes checking whether time.h and sys/time.h may both be included... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for an ANSI C-conforming const... yes checking for mode_t... yes checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of int *... 8 checking size of time_t... 8 checking whether byte ordering is bigendian... no checking for working memcmp... yes checking return type of signal handlers... void checking for strftime... yes checking for vprintf... yes checking for _doprnt... no checking for gethostname... yes checking for getcwd... yes checking for mktime... yes checking for putenv... yes checking for strdup... yes checking for strerror... yes checking for strstr... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating src/acedb/Makefile config.status: creating src/libsrc/Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating man/Makefile config.status: creating Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build -a make -j4 make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' make all-recursive make[3]: Entering directory '/<>/src' Making all in acedb make[4]: Entering directory '/<>/src/acedb' gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o freesubs.o freesubs.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o freeout.o freeout.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o messclean.o messclean.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o arraysub.o arraysub.c freesubs.c: In function ‘freecard’: freesubs.c:229:7: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result] 229 | system ((char*)pos) ; | ^~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o filsubs.o filsubs.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o timesubs.o timesubs.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o randsubs.o randsubs.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o call.o call.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o filqng.o filqng.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o dict.o dict.c gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o messubs.o messubs.c rm -f libfree.a ar cru libfree.a freesubs.o freeout.o messclean.o arraysub.o filsubs.o timesubs.o randsubs.o call.o filqng.o dict.o messubs.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libfree.a make[4]: Leaving directory '/<>/src/acedb' Making all in libsrc make[4]: Entering directory '/<>/src/libsrc' gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o readline.o readline.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cl.o cl.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o searchpath.o searchpath.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o seed.o seed.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cmp.o cmp.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o dir.o dir.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o priority_queue.o priority_queue.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o ncr.o ncr.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cafseq.o cafseq.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cafstrings.o cafstrings.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o assembly.o assembly.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o base_edit.o base_edit.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o seq_util.o seq_util.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o clipping.o clipping.c seq_util.c: In function ‘compile_embl_index’: seq_util.c:699:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 699 | fscanf( datafile, "%s", sname ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_util.c: In function ‘compile_fasta_index’: seq_util.c:749:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 749 | fscanf( datafile, "%s", sname ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_util.c: In function ‘compile_nbrf_index’: seq_util.c:786:7: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 786 | fscanf( datafile, ">>>>%s", name1 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_util.c:787:7: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 787 | fscanf( textfile, ">>>>%s", name2 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o consensus.o consensus.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o fix_tags.o fix_tags.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cafbin.o cafbin.c cafbin.c: In function ‘readBinCafSeq’: cafbin.c:278:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 278 | fread( seq, sizeof(CAFSEQ), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:292:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 292 | fread(dna,sizeof(char),len,fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:305:7: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 305 | fread(seq->base_quality->base,sizeof(BQ_SIZE),len,fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:312:7: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 312 | fread(seq->base_position->base,sizeof(BP_SIZE),len,fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:324:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 324 | fread( a, sizeof(ASSINF), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:343:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 343 | fread( edit, sizeof(edit_struct), 1, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cafbin.c:365:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 365 | fread(other,sizeof(char),len,fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o padding.o padding.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf_check.o caf_check.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o pair_memory.o pair_memory.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o assinf.o assinf.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o tree_util.o tree_util.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o sgrep.o sgrep.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o sw.o sw.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o seq_dict.o seq_dict.c seq_dict.c: In function ‘read_dictionary’: seq_dict.c:219:7: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 219 | fread( seqdict->seq_len, sizeof(int), seqdict->sequences, fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_dict.c:223:4: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result] 223 | fscanf(fp, "%d %s\n", &i, name ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_dict.c:231:8: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 231 | fread( &seqdict->count[i], sizeof(int), 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq_dict.c:233:8: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 233 | fread( seqdict->hash_db[i], sizeof(int), seqdict->count[i], fp ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o lin_align.o lin_align.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o banded.o banded.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o wordhash.o wordhash.c gcc -DHAVE_CONFIG_H -I. -I../../src -I./../acedb -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o bases.o bases.c rm -f libcl.a ar cru libcl.a readline.o cl.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libcl.a rm -f libutils.a ar cru libutils.a searchpath.o seed.o cmp.o dir.o priority_queue.o ncr.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libutils.a rm -f libcaf.a ar cru libcaf.a cafseq.o cafstrings.o assembly.o base_edit.o seq_util.o clipping.o consensus.o fix_tags.o cafbin.o padding.o caf_check.o pair_memory.o assinf.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libcaf.a rm -f libseq.a ar cru libseq.a tree_util.o seq_util.o sgrep.o sw.o seq_dict.o lin_align.o banded.o wordhash.o bases.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libseq.a make[4]: Leaving directory '/<>/src/libsrc' Making all in . make[4]: Entering directory '/<>/src' gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf_pad.o caf_pad.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf_depad.o caf_depad.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cafmerge.o cafmerge.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf2phrap.o caf2phrap.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o cafcat.o cafcat.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o nd_clip.o nd_clip.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf2ace.o caf2ace.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o sdict.o sdict.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o phrapcons.o phrapcons.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o fix_quals.o fix_quals.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf_build_consensus.o caf_build_consensus.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf2gap.o caf2gap.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf_check_pads.o caf_check_pads.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o templates.o templates.c gcc -DHAVE_CONFIG_H -I. -I./acedb -I./libsrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -c -o caf2fastq.o caf2fastq.c gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf_pad caf_pad.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf_depad caf_depad.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o cafmerge cafmerge.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf2phrap caf2phrap.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o cafcat cafcat.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o nd_clip nd_clip.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf2ace caf2ace.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o sdict sdict.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: sdict.o: in function `dump_and_merge': ./src/sdict.c:632: warning: the use of `tempnam' is dangerous, better use `mkstemp' gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o phrapcons phrapcons.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o fix_quals fix_quals.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf_build_consensus caf_build_consensus.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf_check_pads caf_check_pads.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o templates templates.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf2fastq caf2fastq.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead gcc -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o caf2gap caf2gap.o libsrc/libcaf.a libsrc/libseq.a acedb/libfree.a libsrc/libutils.a libsrc/libcl.a /usr/bin/ld: acedb/libfree.a(filsubs.o): in function `filtmpopen': ./src/acedb/filsubs.c:321: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x18): warning: `sys_errlist' is deprecated; use `strerror' or `strerror_r' instead /usr/bin/ld: acedb/libfree.a(messclean.o):(.toc+0x10): warning: `sys_nerr' is deprecated; use `strerror' or `strerror_r' instead make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making all in tests make[2]: Entering directory '/<>/tests' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' Making check in acedb make[3]: Entering directory '/<>/src/acedb' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/acedb' Making check in libsrc make[3]: Entering directory '/<>/src/libsrc' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/libsrc' Making check in . make[3]: Entering directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making check in tests make[2]: Entering directory '/<>/tests' rm -rf caf2gap-test rm -rf caf2phrap-test rm -rf caf_build_consensus-test mkdir caf2gap-test mkdir caf2phrap-test mkdir caf_build_consensus-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi cd caf2gap-test && ln -s ../test_data/test.caf test.caf cd caf2phrap-test && ln -s ../test_data/test.caf test.caf cd caf_build_consensus-test && ln -s ../test_data/test.caf test.caf cd ../src && make caf2gap cd ../src && make caf2phrap cd ../src && make caf_build_consensus rm -rf caf_depad-test make[3]: Entering directory '/<>/src' make[3]: 'caf2phrap' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_caf2phrap make[3]: Entering directory '/<>/src' make[3]: 'caf2gap' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_caf2gap mkdir caf_depad-test make[3]: Entering directory '/<>/src' make[3]: 'caf_build_consensus' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_caf_build_consensus if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi cd caf_depad-test && ln -s ../test_data/test.caf test.caf Test 1: Test program output .................................. Test 1: Test program output .................................. cd ../src && make caf_depad ################################### -*- caf2gap: -*- No Checks Available ################################### rm -rf caf_pad-test mkdir caf_pad-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi make[3]: Entering directory '/<>/src' make[3]: 'caf_depad' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_caf_depad cd caf_pad-test && ln -s ../test_data/test.caf test.caf cd ../src && make caf_pad make[3]: Entering directory '/<>/src' make[3]: 'caf_pad' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_caf_pad Test 1: Test program output .................................. Pass Pass Test 1: Test program output .................................. Test 2: Checking caf file for NULL's ......................... Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 3: Checking CAF data for missing entries ................ Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... Pass Pass Test 7: Comparing test output ................................ Pass Test 8: Comparing fasta output ............................... Pass Pass Test 9: Comparing quality output ............................. Pass Test 7: Comparing test output ................................ Pass ################################### -*- caf_build_consensus: -*- All tests passed ################################### rm -rf cafcat-test mkdir cafcat-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi cd cafcat-test && ln -s ../test_data/test.caf test.caf cd ../src && make cafcat Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... make[3]: Entering directory '/<>/src' make[3]: 'cafcat' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_cafcat Test 1: Test program output .................................. Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... Pass Test 7: Comparing test output ................................ Pass ################################### -*- caf_depad: -*- All tests passed ################################### rm -rf cafmerge-test mkdir cafmerge-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi cd cafmerge-test && ln -s ../test_data/test.caf test.caf cd ../src && make cafmerge make[3]: Entering directory '/<>/src' make[3]: 'cafmerge' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_cafmerge Pass Pass ################################### -*- caf2phrap: -*- All tests passed ################################### rm -rf fix_quals-test Pass Test 7: Comparing test output ................................ Pass mkdir fix_quals-test ################################### -*- caf_pad: -*- All tests passed ################################### rm -rf nd_clip-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi Test 1: Test program output .................................. cd fix_quals-test && ln -s ../test_data/test.caf test.caf mkdir nd_clip-test cd ../src && make fix_quals if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi make[3]: Entering directory '/<>/src' make[3]: 'fix_quals' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_fix_quals cd nd_clip-test && ln -s ../test_data/test.caf test.caf cd ../src && make nd_clip make[3]: Entering directory '/<>/src' make[3]: 'nd_clip' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_nd_clip Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... ################################### -*- fix_quals: -*- No Checks Available ################################### rm -rf phrapcons-test mkdir phrapcons-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi Test 1: Test program output .................................. cd phrapcons-test && ln -s ../test_data/test.caf test.caf cd ../src && make phrapcons make[3]: Entering directory '/<>/src' make[3]: 'phrapcons' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_phrapcons Test 1: Test program output .................................. Pass Test 7: Comparing test output ................................ Pass ################################### -*- cafcat: -*- All tests passed ################################### rm -rf sdict-test mkdir sdict-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi Pass cd sdict-test && ln -s ../test_data/test.caf test.caf cd ../src && make sdict make[3]: Entering directory '/<>/src' make[3]: 'sdict' is up to date. make[3]: Leaving directory '/<>/src' /usr/bin/perl ../tests/test_sdict Pass ################################### -*- sdict: -*- No Checks Available ################################### rm -rf templates-test Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Pass mkdir templates-test if [ ! -e test_data -a x. != x. ] ; then ln -s ../tests/test_data test_data ; fi cd templates-test && ln -s ../test_data/test.caf test.caf cd ../src && make templates make[3]: Entering directory '/<>/src' Test 2: Checking caf file for NULL's ......................... make[3]: 'templates' is up to date. make[3]: Leaving directory '/<>/src' Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... /usr/bin/perl ../tests/test_templates Test 6: Comparing test output ................................ Pass ################################### -*- cafmerge: -*- All tests passed ################################### Pass Test 7: Comparing test output ................................ Test 1: Test program output .................................. Pass ################################### -*- nd_clip: -*- All tests passed ################################### Test 2: Checking caf file for NULL's ......................... Pass Test 3: Checking CAF data for missing entries ................ Pass Test 4: Checking raw sequence entries for missing information Pass Test 5: Checking seq length matches basequality length ....... Pass Test 6: Reading standard output file ......................... Pass Test 2: Reading installed output ............................. Pass Test 3: Reading test output .................................. Pass Test 4: Comparing output lines ............................... Pass ################################### -*- templates: -*- All tests passed ################################### Pass Test 7: Comparing test output ................................ Pass ################################### -*- phrapcons: -*- All tests passed ################################### make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a rm -f -- debian/caftools.substvars rm -fr -- debian/.debhelper/generated/caftools/ debian/caftools/ debian/tmp/ dh_auto_install -a install -d /<>/debian/caftools make -j4 install DESTDIR=/<>/debian/caftools AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' Making install in acedb make[3]: Entering directory '/<>/src/acedb' make[4]: Entering directory '/<>/src/acedb' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/acedb' make[3]: Leaving directory '/<>/src/acedb' Making install in libsrc make[3]: Entering directory '/<>/src/libsrc' make[4]: Entering directory '/<>/src/libsrc' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/src/libsrc' make[3]: Leaving directory '/<>/src/libsrc' Making install in . make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/caftools/usr/bin' make[4]: Nothing to be done for 'install-data-am'. /usr/bin/install -c caf_pad caf_depad cafmerge caf2phrap cafcat nd_clip caf2ace sdict phrapcons fix_quals caf_build_consensus caf2gap caf_check_pads templates caf2fastq '/<>/debian/caftools/usr/bin' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_install -a cp --reflink=auto -a ./src/caf2ace ./src/caf2fastq ./src/caf2gap ./src/caf2phrap ./src/caf_build_consensus ./src/caf_check_pads ./src/caf_depad ./src/caf_pad ./src/cafcat ./src/cafmerge ./src/fix_quals ./src/nd_clip ./src/phrapcons ./src/sdict ./src/templates debian/caftools/usr/bin/ install -d debian/.debhelper/generated/caftools dh_installdocs -a install -d debian/caftools/usr/share/doc/caftools install -p -m0644 debian/README.Debian debian/caftools/usr/share/doc/caftools/README.Debian install -p -m0644 debian/copyright debian/caftools/usr/share/doc/caftools/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/caftools/usr/share/doc/caftools/changelog.Debian dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/caftools chmod a-x usr/share/doc/caftools/changelog.Debian gzip -9nf usr/share/doc/caftools/changelog.Debian cd '/<>' dh_fixperms -a find debian/caftools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/caftools/usr/share/doc -type f -a -true -a ! -regex 'debian/caftools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/caftools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/caftools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/caftools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_strip -a install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/7f objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/phrapcons debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/7f/91b4d4d11951d05a652b3ccc965b8ddd25699d.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/7f/91b4d4d11951d05a652b3ccc965b8ddd25699d.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/phrapcons objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/7f/91b4d4d11951d05a652b3ccc965b8ddd25699d.debug debian/caftools/usr/bin/phrapcons install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/e9 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf_depad debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/e9/0f7866da9b745f4da0260fd3f9a7988233135e.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/e9/0f7866da9b745f4da0260fd3f9a7988233135e.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf_depad objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/e9/0f7866da9b745f4da0260fd3f9a7988233135e.debug debian/caftools/usr/bin/caf_depad install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf_build_consensus debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a2/ed2d0f20fe60e996a31105ad0c349fc597b49c.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a2/ed2d0f20fe60e996a31105ad0c349fc597b49c.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf_build_consensus objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a2/ed2d0f20fe60e996a31105ad0c349fc597b49c.debug debian/caftools/usr/bin/caf_build_consensus install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf2gap debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a7/89468d171685e689b98d85ed0b6cc43df5773b.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a7/89468d171685e689b98d85ed0b6cc43df5773b.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf2gap objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a7/89468d171685e689b98d85ed0b6cc43df5773b.debug debian/caftools/usr/bin/caf2gap install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf2phrap debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a0/cda4d155c07cdf7255d94aadf130aaa382d926.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a0/cda4d155c07cdf7255d94aadf130aaa382d926.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf2phrap objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/a0/cda4d155c07cdf7255d94aadf130aaa382d926.debug debian/caftools/usr/bin/caf2phrap install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf_check_pads debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/9e/3bdbfcbabfc45495274a7d66e5f2a55360704f.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/9e/3bdbfcbabfc45495274a7d66e5f2a55360704f.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf_check_pads objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/9e/3bdbfcbabfc45495274a7d66e5f2a55360704f.debug debian/caftools/usr/bin/caf_check_pads install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf2ace debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/40/76f998c23dd235e363b4233890dc76c5584dab.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/40/76f998c23dd235e363b4233890dc76c5584dab.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf2ace objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/40/76f998c23dd235e363b4233890dc76c5584dab.debug debian/caftools/usr/bin/caf2ace install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf2fastq debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1a/80198a379cf90feb18501e55ff3df3f69ca584.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1a/80198a379cf90feb18501e55ff3df3f69ca584.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf2fastq objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1a/80198a379cf90feb18501e55ff3df3f69ca584.debug debian/caftools/usr/bin/caf2fastq install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/caf_pad debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/45/9b795850c6d8743a18d5ffb5e8d68dcaf6fe8b.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/45/9b795850c6d8743a18d5ffb5e8d68dcaf6fe8b.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/caf_pad objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/45/9b795850c6d8743a18d5ffb5e8d68dcaf6fe8b.debug debian/caftools/usr/bin/caf_pad install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/cafmerge debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/fe/ee5acff4536f3f0051aad8979be22bd14a0ae8.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/fe/ee5acff4536f3f0051aad8979be22bd14a0ae8.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/cafmerge objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/fe/ee5acff4536f3f0051aad8979be22bd14a0ae8.debug debian/caftools/usr/bin/cafmerge install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/fix_quals debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/d98f83031761217709a0b435259ef69774331c.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/d98f83031761217709a0b435259ef69774331c.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/fix_quals objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/d98f83031761217709a0b435259ef69774331c.debug debian/caftools/usr/bin/fix_quals install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1b objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/nd_clip debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1b/271eb7cc2a5a9165b8d871909e7dc23fd7c717.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1b/271eb7cc2a5a9165b8d871909e7dc23fd7c717.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/nd_clip objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1b/271eb7cc2a5a9165b8d871909e7dc23fd7c717.debug debian/caftools/usr/bin/nd_clip install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1c objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/cafcat debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1c/9e498a962fcae27ce97c91dcdd80f3e3377518.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1c/9e498a962fcae27ce97c91dcdd80f3e3377518.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/cafcat objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/1c/9e498a962fcae27ce97c91dcdd80f3e3377518.debug debian/caftools/usr/bin/cafcat objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/templates debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/c2e219a6eb08e515f3121cb716e4e02ff9753b.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/c2e219a6eb08e515f3121cb716e4e02ff9753b.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/templates objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/6d/c2e219a6eb08e515f3121cb716e4e02ff9753b.debug debian/caftools/usr/bin/templates install -d debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/caftools/usr/bin/sdict debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/cf/8c6da9748dd22324f8bdb6134b35a4267dd4c8.debug chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/cf/8c6da9748dd22324f8bdb6134b35a4267dd4c8.debug strip --remove-section=.comment --remove-section=.note debian/caftools/usr/bin/sdict objcopy --add-gnu-debuglink debian/.debhelper/caftools/dbgsym-root/usr/lib/debug/.build-id/cf/8c6da9748dd22324f8bdb6134b35a4267dd4c8.debug debian/caftools/usr/bin/sdict install -d debian/.debhelper/caftools/dbgsym-root/usr/share/doc ln -s caftools debian/.debhelper/caftools/dbgsym-root/usr/share/doc/caftools-dbgsym dh_makeshlibs -a rm -f debian/caftools/DEBIAN/shlibs dh_shlibdeps -a install -d debian/caftools/DEBIAN dpkg-shlibdeps -Tdebian/caftools.substvars debian/caftools/usr/bin/phrapcons debian/caftools/usr/bin/caf_depad debian/caftools/usr/bin/caf_build_consensus debian/caftools/usr/bin/caf2gap debian/caftools/usr/bin/caf2phrap debian/caftools/usr/bin/caf_check_pads debian/caftools/usr/bin/caf2ace debian/caftools/usr/bin/caf2fastq debian/caftools/usr/bin/caf_pad debian/caftools/usr/bin/cafmerge debian/caftools/usr/bin/fix_quals debian/caftools/usr/bin/nd_clip debian/caftools/usr/bin/cafcat debian/caftools/usr/bin/templates debian/caftools/usr/bin/sdict dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/caftools.substvars echo misc:Pre-Depends= >> debian/caftools.substvars install -d debian/.debhelper/caftools/dbgsym-root/DEBIAN dpkg-gencontrol -pcaftools -ldebian/changelog -Tdebian/caftools.substvars -Pdebian/.debhelper/caftools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=caftools-dbgsym "-DDepends=caftools (= \${binary:Version})" "-DDescription=debug symbols for caftools" "-DBuild-Ids=1a80198a379cf90feb18501e55ff3df3f69ca584 1b271eb7cc2a5a9165b8d871909e7dc23fd7c717 1c9e498a962fcae27ce97c91dcdd80f3e3377518 4076f998c23dd235e363b4233890dc76c5584dab 459b795850c6d8743a18d5ffb5e8d68dcaf6fe8b 6dc2e219a6eb08e515f3121cb716e4e02ff9753b 6dd98f83031761217709a0b435259ef69774331c 7f91b4d4d11951d05a652b3ccc965b8ddd25699d 9e3bdbfcbabfc45495274a7d66e5f2a55360704f a0cda4d155c07cdf7255d94aadf130aaa382d926 a2ed2d0f20fe60e996a31105ad0c349fc597b49c a789468d171685e689b98d85ed0b6cc43df5773b cf8c6da9748dd22324f8bdb6134b35a4267dd4c8 e90f7866da9b745f4da0260fd3f9a7988233135e feee5acff4536f3f0051aad8979be22bd14a0ae8" -DSection=non-free/debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcaftools -ldebian/changelog -Tdebian/caftools.substvars -Pdebian/caftools -UMulti-Arch chmod 0644 -- debian/caftools/DEBIAN/control dh_md5sums -a cd debian/caftools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/caftools/DEBIAN/md5sums cd debian/.debhelper/caftools/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/caftools/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/caftools .. install -d debian/.debhelper/scratch-space/build-caftools dpkg-deb --root-owner-group --build debian/.debhelper/caftools/dbgsym-root debian/.debhelper/scratch-space/build-caftools INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing caftools (in debian/caftools); do_strip: , oemstrip: pkgstriptranslations: processing caftools-dbgsym (in debian/.debhelper/caftools/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/caftools/DEBIAN/control, package caftools, directory debian/caftools pkgstripfiles: Running PNG optimization (using 4 cpus) for package caftools ... pkgstripfiles: No PNG files. dpkg-deb: building package 'caftools' in '../caftools_2.0.3-1_ppc64el.deb'. pkgstripfiles: processing control file: debian/.debhelper/caftools/dbgsym-root/DEBIAN/control, package caftools-dbgsym, directory debian/.debhelper/caftools/dbgsym-root dpkg-deb: building package 'caftools-dbgsym' in 'debian/.debhelper/scratch-space/build-caftools/caftools-dbgsym_2.0.3-1_ppc64el.deb'. Renaming caftools-dbgsym_2.0.3-1_ppc64el.deb to caftools-dbgsym_2.0.3-1_ppc64el.ddeb mv debian/.debhelper/scratch-space/build-caftools/caftools-dbgsym_2.0.3-1_ppc64el.deb ../caftools-dbgsym_2.0.3-1_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../caftools_2.0.3-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200519-2319 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ caftools_2.0.3-1_ppc64el.changes: --------------------------------- Format: 1.8 Date: Tue, 19 May 2020 16:17:35 +0200 Source: caftools Binary: caftools Architecture: ppc64el Version: 2.0.3-1 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Steffen Moeller Description: caftools - maintenance of DNA sequence assemblies Changes: caftools (2.0.3-1) unstable; urgency=medium . * New upstream release. * Helped d/watch * Updated policy to 4.5.0 * Rules-Requires-Root: no * Removed patch introducing regex.h for sgrep since adopted upstream. Checksums-Sha1: 7c67e5b9c9d7035385405728eeafb9e0f33db82d 2838664 caftools-dbgsym_2.0.3-1_ppc64el.ddeb e7eafad225f58f428d9c70b3cae1856a38630a6f 5095 caftools_2.0.3-1_ppc64el.buildinfo 1a8d95cacee695657ce8e3e271e384124c8c7208 250488 caftools_2.0.3-1_ppc64el.deb Checksums-Sha256: 7630d31ec155fea30ca410dd118f0ffe5e9207e9b6cb4f9b9703e1cf482b5496 2838664 caftools-dbgsym_2.0.3-1_ppc64el.ddeb 571708fd76faaf0ef28bfc39e61fe022182946b9a6d3574044105e4fc27e0c19 5095 caftools_2.0.3-1_ppc64el.buildinfo 8243b8a6da5d44f37156c87d16609e1561461bc43bdfb64b3611689efd9962ca 250488 caftools_2.0.3-1_ppc64el.deb Files: 50d6f88ad7ec10a03a03f2403d467e00 2838664 non-free/debug optional caftools-dbgsym_2.0.3-1_ppc64el.ddeb 47eeb8e849dc0fdcbeaa575eb4b77665 5095 non-free/science optional caftools_2.0.3-1_ppc64el.buildinfo 5f24d307b1115deaf291d888da2fcab3 250488 non-free/science optional caftools_2.0.3-1_ppc64el.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ caftools_2.0.3-1_ppc64el.deb ---------------------------- new debian package, version 2.0. size 250488 bytes: control archive=1360 bytes. 935 bytes, 22 lines control 994 bytes, 18 lines md5sums Package: caftools Version: 2.0.3-1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Steffen Moeller Installed-Size: 3449 Depends: libc6 (>= 2.17) Suggests: staden Section: non-free/science Priority: optional Homepage: https://www.sanger.ac.uk/science/tools/caf Description: maintenance of DNA sequence assemblies This package contains code from different authors that allow sequence assemblies to be converted into formats such as CAF (Common Assembly Format) or GAP4. . CAF is a text format for describing sequence assemblies. It is acedb-compliant and is an extension of the ace-file format used earlier, but with support for base quality measures and a more extensive description of the Sequence data. CAF was designed during the Sanger sequencing era. Its modern-day successor is the SAM format, or its binary equivalents BAM and CRAM. drwxr-xr-x root/root 0 2020-05-19 14:17 ./ drwxr-xr-x root/root 0 2020-05-19 14:17 ./usr/ drwxr-xr-x root/root 0 2020-05-19 14:17 ./usr/bin/ -rwxr-xr-x root/root 265104 2020-05-19 14:17 ./usr/bin/caf2ace -rwxr-xr-x root/root 199536 2020-05-19 14:17 ./usr/bin/caf2fastq -rwxr-xr-x root/root 265168 2020-05-19 14:17 ./usr/bin/caf2gap -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/caf2phrap -rwxr-xr-x root/root 199536 2020-05-19 14:17 ./usr/bin/caf_build_consensus -rwxr-xr-x root/root 199536 2020-05-19 14:17 ./usr/bin/caf_check_pads -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/caf_depad -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/caf_pad -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/cafcat -rwxr-xr-x root/root 199536 2020-05-19 14:17 ./usr/bin/cafmerge -rwxr-xr-x root/root 199536 2020-05-19 14:17 ./usr/bin/fix_quals -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/nd_clip -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/phrapcons -rwxr-xr-x root/root 133224 2020-05-19 14:17 ./usr/bin/sdict -rwxr-xr-x root/root 265072 2020-05-19 14:17 ./usr/bin/templates drwxr-xr-x root/root 0 2020-05-19 14:17 ./usr/share/ drwxr-xr-x root/root 0 2020-05-19 14:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-19 14:17 ./usr/share/doc/caftools/ -rw-r--r-- root/root 1017 2020-05-03 22:35 ./usr/share/doc/caftools/README.Debian -rw-r--r-- root/root 351 2020-05-19 14:17 ./usr/share/doc/caftools/changelog.Debian.gz -rw-r--r-- root/root 2643 2020-05-19 14:17 ./usr/share/doc/caftools/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 45960 Build-Time: 21 Distribution: groovy-proposed Host Architecture: ppc64el Install-Time: 8 Job: caftools_2.0.3-1.dsc Machine Architecture: ppc64el Package: caftools Package-Time: 30 Source-Version: 2.0.3-1 Space: 45960 Status: successful Version: 2.0.3-1 -------------------------------------------------------------------------------- Finished at 20200519-2319 Build needed 00:00:30, 45960k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19326327 Scanning for processes to kill in build PACKAGEBUILD-19326327