cain 1.10+dfsg-1 source package in Ubuntu
Changelog
cain (1.10+dfsg-1) unstable; urgency=medium
[ Ivo Maintz ]
* debian/rules:
- added patch by Chris Lamb <email address hidden> for
repoducible builds
Closes: #792684
* debian/control:
- bumped Standards-Version to 3.9.6
- changed description for cain-examples and cain-solvers
[ Andreas Tille ]
* New upstream version
* Fixed watch file
* debian/copyright rewritten to match DEP5
* Moved packaging from SVN to Git
* Remove debian/menu
-- Andreas Tille <email address hidden> Sat, 19 Dec 2015 07:22:11 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Xenial | release | universe | science |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| cain_1.10+dfsg-1.dsc | 2.0 KiB | 556ee4e278da6d19e6f3cde07b700d5581e5696b5c66c97f4f9c820bb0b34b31 |
| cain_1.10+dfsg.orig.tar.xz | 15.2 MiB | 3d2df61b21df23ccfc621b8f7efdac1edd4da18041f246dd0eb7318d9dda574c |
| cain_1.10+dfsg-1.debian.tar.xz | 7.1 KiB | 240d13ab0a155cf0c4346b1cad81fee8ec3dcacad316b1d4ccc6bc9dc3577f77 |
Available diffs
- diff from 1.9-8 to 1.10+dfsg-1 (20.6 KiB)
No changes file available.
Binary packages built by this source
- cain: No summary available for cain in ubuntu yakkety.
No description available for cain in ubuntu yakkety.
- cain-examples: No summary available for cain-examples in ubuntu yakkety.
No description available for cain-examples in ubuntu yakkety.
- cain-solvers: No summary available for cain-solvers in ubuntu yakkety.
No description available for cain-solvers in ubuntu yakkety.
- cain-solvers-dbgsym: debug symbols for package cain-solvers
Cain performs stochastic and deterministic simulations of chemical reactions.
It can spawn multiple simulation processes to utilize multi-core computers.
It stores models, methods, and simulation output (populations and reaction
counts) in an XML format. In addition, SBML models can be imported and
exported. The models and methods can be read from input files or edited
within the program.
.
The GUI (Graphical User Interface) is written in Python and uses the wxPython
toolkit. Most of the solvers are implemented as command line executables,
written in C++, which are driven by Cain. This makes it easy to launch batch
jobs. It also simplifies the process of adding new solvers. Cain offers a
variety of solvers:
* Gillespie's direct method.
* Gillespie's first reaction method.
* Gibson and Bruck's next reaction method.
* Tau-leaping.
* Hybrid direct/tau-leaping.
* ODE integration.
.
This package provides the solver libraries
